mRNA_M-pyrifera_M_contig65522.15928.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig65522.15928.1
Unique NamemRNA_M-pyrifera_M_contig65522.15928.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
[Close]
BLAST of mRNA_M-pyrifera_M_contig65522.15928.1 vs. uniprot
Match: A0A7S1CNX9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CNX9_9STRA)

HSP 1 Score: 157 bits (398), Expect = 1.860e-42
Identity = 92/211 (43.60%), Postives = 121/211 (57.35%), Query Frame = 1 
Query:    1 NLYVTYLFVARAIHRASPLLTHMTFATGKEEEDARARALVAQLVRGEGRSKEAVERVQSGFNETRLFSLTPAEIAAACPPVVHGLEDLAALQTRMQSALERKLRLRDLFREKFRNISRIMDCVDCHRCRLWGKVQFMGIGTAMAILFGDAAEHLHDHLVEETPDGGIRLLDQRGKVMLDLRHNAVVALFNVFHRLAESVAFAQQHRTLAIQ 633
            NLY TYLFV RAI +A P+L  +   TG  ++D R R L+A L      + + V  V  GF+E+ +F +   E+ A CPPV+HGLEDL  LQ R      +K +L+D FR KF NISRIMDCV C +CRLWGK++F+G+GTAM ILF D A H         P+             + L  N V+AL  V  +LAES+++    R L  Q
Sbjct:  256 NLYFTYLFVMRAIAKAKPILEGLLVNTGVPDDDQRTRELLASL------TSQEVPAVLRGFDESSMFKVKAEELVAECPPVLHGLEDLHDLQHRYVDEAAKKAKLKDSFRAKFHNISRIMDCVGCEKCRLWGKLEFLGVGTAMKILFDDDATH--------GPN-------------VKLTRNEVIALVTVVKQLAESLSYIPLMRGLEEQ 439
[Close]
BLAST of mRNA_M-pyrifera_M_contig65522.15928.1 vs. uniprot
Match: A0A812J8H1_9DINO (AERO1 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812J8H1_9DINO)

HSP 1 Score: 134 bits (337), Expect = 4.600e-33
Identity = 83/216 (38.43%), Postives = 112/216 (51.85%), Query Frame = 1 
Query:    1 NLYVTYLFVARAIHRASPLLTHMTFATGKEEEDARARALVAQLVRGEGRSKEAVERVQSGFNETRLFSLTPAEIAAACPPVVHGLEDLAALQTRMQSALERKLRLRDLFREKFRNISRIMDCVDCHRCRLWGKVQFMGIGTAMAILFGDAAEHLHDHLVEETPDG-----GIRLLDQRGKVMLDLRHNAVVALFNVFHRLAESVAFAQQHRTLAIQ 633
            NLY  YL + RA   A P+L  + + TG    D   R LV QL+            V S F+E  LF ++  E+ A CP  +  L DLAAL+    +    K  LR   R  FRN+SRIMDCV C +CRLWGK+QF+G+GTA+ +LF +     HD ++ ++  G     G       G+   DL  N VVAL N  HR++ SV  A+  R   +Q
Sbjct:  328 NLYFVYLVLLRAADTARPILQTLPYDTGNPVADGETRQLVRQLLAA------PQPDVLSAFDERGLFKVSREEVMATCPATLSDLSDLAALKRGYLAHAAAKQELRQRMRGAFRNVSRIMDCVGCDKCRLWGKIQFLGLGTALKLLFAE-----HDQVIVDSAAGIAAGEGGLASPSDGEPPFDLSRNEVVALVNTLHRVSMSVQAAKDFRGQDLQ 532
[Close]
BLAST of mRNA_M-pyrifera_M_contig65522.15928.1 vs. uniprot
Match: A0A5A8EBK6_CAFRO (Uncharacterized protein n=5 Tax=Sar TaxID=2698737 RepID=A0A5A8EBK6_CAFRO)

HSP 1 Score: 133 bits (334), Expect = 1.080e-32
Identity = 87/202 (43.07%), Postives = 112/202 (55.45%), Query Frame = 1 
Query:    1 NLYVTYLFVARAIHRASP-LLTHMTFATGKEEEDARARALVAQLVRGEGRSKEAVERVQSGFNETRLFSLTPAEIAAACPPVVHG-LEDLAALQTRMQSALERKLRLRDLFREKFRNISRIMDCVDCHRCRLWGKVQFMGIGTAMAILFGDAAEHLHDHLVEETPDGGIRLLDQRGKVMLDLRHNAVVALFNVFHRLAESVA 600
            NLY T+L V RA+ +A   LL     ++G E ED++ RA++ +LV G G    A + V   F+E  +F +   E+  ACP V+ G L D+  L  R   A +RK  LR  F+ KFRNISRIMDCV C +CR+WGK+QF+G+GTAM +LF D      D    E P                L  N  VAL NV HRLA SVA
Sbjct:  294 NLYFTFLVVLRAVRKAGDRLLAPGLLSSGLEGEDSQVRAMLTRLV-GSG-EHPAADLVGQAFDEQAMFRVRREEVVEACPAVLSGGLTDMQELTRRYHEAAQRKAALRAEFQGKFRNISRIMDCVGCEKCRMWGKLQFLGLGTAMKVLFDD------DGAGAEIP----------------LTRNEAVALVNVLHRLAISVA 471
[Close]
BLAST of mRNA_M-pyrifera_M_contig65522.15928.1 vs. uniprot
Match: A0A7S2DCT6_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DCT6_9STRA)

HSP 1 Score: 118 bits (296), Expect = 1.500e-27
Identity = 81/209 (38.76%), Postives = 113/209 (54.07%), Query Frame = 1 
Query:    1 NLYVTYLFVARAIHRASPLLTHMTFATGKEEEDARARALVAQLVRGEGR---SKEAVERVQSGFNETRLFSLTPAEIAAACPPVVHGLEDLAALQTRMQSALERKLRLRDLFREKFRNISRIMDCVDCHRCRLWGKVQFMGIGTAMAILFGDAAEHLHDHLVEETPDGGIRLLDQRGKVMLDLRHNAVVALFNVFHRLAESVAFAQQHR 618
            NLY TYLF+ RA+ +A+P L    F TG  EED+R+RALV  LVR +     + +A +  Q GF+E+RLF +  +E+           E +   +  M  A+ R L LR  F+E+FRNISRIMDCV C +CRLWGK+Q +GIGTA+ IL                        ++ G++ L  + N  +AL N   +L+ SV   Q  R
Sbjct:  292 NLYFTYLFLLRALAKAAPALEASHFDTGHAEEDSRSRALVRALVRPDHPLLDASQAAQVCQRGFDESRLFQMD-SELE----------EGMTEFEQYM--AMRRTLELRKEFQERFRNISRIMDCVGCEKCRLWGKLQVLGIGTALKILMSR---------------------EEEGEITL--QRNEAIALLNTLAQLSTSVQSVQLWR 464
[Close]
BLAST of mRNA_M-pyrifera_M_contig65522.15928.1 vs. uniprot
Match: A0A024UB18_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UB18_9STRA)

HSP 1 Score: 114 bits (285), Expect = 4.440e-26
Identity = 80/218 (36.70%), Postives = 105/218 (48.17%), Query Frame = 1 
Query:    1 NLYVTYLFVARAIHRASPLLTHMTFATGKEEEDARARALVAQLVRGEGRSKEAVERVQS-------GFNETRLFSLTPAEIAAACPPVVHGLEDLAALQTRMQSALERKLRLRDLFREKFRNISRIMDCVDCHRCRLWGKVQFMGIGTAMAILFGDAAEHLHDHLVEETPDGGIRLLDQRGKVMLDLRHNAVVALFNVFHRLAESVAFAQQHRTLAIQ 633
            NLY TYLFV RA+ R   +L H  F TG   +DARA  ++  L   +  +  A  R  S       GFNET LFS              + +E++       Q+ LER+ R    F++KF NISRIMDCV C +CRLWGK+Q +G+GTA+ IL  D                           M  L  N ++AL NV HRL+ESV    + R L  +
Sbjct:  277 NLYFTYLFVLRAVGRYRDVLLHYDFETGNAADDARASTILKSLFDVDNHAYNASCRAPSDSRAVLFGFNETMLFS--------------NSMENMFL----NQNDLERQRRQ---FKQKFENISRIMDCVTCEKCRLWGKIQVLGLGTAIKILLADDVS-----------------------TMPPLHRNEMIALINVLHRLSESVEGVTRFRQLEFE 450
[Close]
BLAST of mRNA_M-pyrifera_M_contig65522.15928.1 vs. uniprot
Match: A0A6G0XA54_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XA54_9STRA)

HSP 1 Score: 112 bits (280), Expect = 2.160e-25
Identity = 80/215 (37.21%), Postives = 101/215 (46.98%), Query Frame = 1 
Query:    1 NLYVTYLFVARAIHRASPLLTHMTFATGKEEEDARARALVAQLVRGEGRSKEAVERVQS-------GFNETRLFSLTPAEIAAACPPVVHGLEDLAALQTRMQSALERKLRLRDLFREKFRNISRIMDCVDCHRCRLWGKVQFMGIGTAMAILFGDAAEHLHDHLVEETPDGGIRLLDQRGKVMLDLRHNAVVALFNVFHRLAESVAFAQQHRTL 624
            NLY TYLFV RA+ R   +L H  F TG   +DARA  ++  L   + ++  A  R  S       GFNET+LFS +   +        H LE                 R R  F++KF NISRIMDCV C +CRLWGKVQ +G+GTA+ IL  D                           M  L  N ++AL NV HRL+ESV    + R L
Sbjct:  266 NLYFTYLFVLRAVGRYRDVLLHYDFETGNAVDDARASTILKALFDVDDQAYNASCRAPSDSRAVLFGFNETKLFSKSMENLFLN----PHDLE-----------------RQRRQFQQKFENISRIMDCVTCEKCRLWGKVQILGLGTAIKILLADDVTK-----------------------MPPLHRNEMIALINVLHRLSESVEGVTRFRQL 436
[Close]
BLAST of mRNA_M-pyrifera_M_contig65522.15928.1 vs. uniprot
Match: A0A485KZ54_9STRA (Aste57867_13825 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KZ54_9STRA)

HSP 1 Score: 112 bits (280), Expect = 2.580e-25
Identity = 83/218 (38.07%), Postives = 106/218 (48.62%), Query Frame = 1 
Query:    1 NLYVTYLFVARAIHRASPLLTHMTFATGKEEEDARARALVAQLVRGEGRSKEAVERVQS-------GFNETRLFSLTPAEIAAACPPVVHGLEDLAALQTRMQSALERKLRLRDLFREKFRNISRIMDCVDCHRCRLWGKVQFMGIGTAMAILFGDAAEHLHDHLVEETPDGGIRLLDQRGKVMLDLRHNAVVALFNVFHRLAESVAFAQQHRTLAIQ 633
            NLY TYLFV RA+ R   +L H  F TG   +DARA  ++  L   + ++  A  R  S       GFNET LFS                +E+L  L T   + LER+ R    F++KF NISRIMDCV C +CRLWGKVQ +G+GTA+ IL  D                           M  L  N ++AL NV HRL+ESV    + R L  +
Sbjct:  298 NLYFTYLFVLRAVGRYRDVLLHYDFETGNAADDARAATILRSLFDVDNQAYNASCRAPSDSRAVLFGFNETMLFS--------------KSMENLF-LNT---NDLERQRRQ---FQQKFENISRIMDCVTCEKCRLWGKVQVLGLGTAIKILLADDVTK-----------------------MPPLHRNEMIALINVLHRLSESVEGVTRFRQLEFE 471
[Close]
BLAST of mRNA_M-pyrifera_M_contig65522.15928.1 vs. uniprot
Match: A0A3R7C0H9_9STRA (Uncharacterized protein n=9 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R7C0H9_9STRA)

HSP 1 Score: 112 bits (279), Expect = 3.130e-25
Identity = 79/218 (36.24%), Postives = 103/218 (47.25%), Query Frame = 1 
Query:    1 NLYVTYLFVARAIHRASPLLTHMTFATGKEEEDARARALVAQLVRGEGRSKEAVERVQS-------GFNETRLFSLTPAEIAAACPPVVHGLEDLAALQTRMQSALERKLRLRDLFREKFRNISRIMDCVDCHRCRLWGKVQFMGIGTAMAILFGDAAEHLHDHLVEETPDGGIRLLDQRGKVMLDLRHNAVVALFNVFHRLAESVAFAQQHRTLAIQ 633
            NLY TYLFV RA+ R   +L H  F TG   +DARA  ++  L   + ++  A  R  S       GFNET LFS +        P  V                     R R  F +KF NISRIMDCV C +CRLWGK+Q +G+GTA+ IL       L D++ +  P                L  N ++AL NV HRL+ESV    + R L ++
Sbjct:  278 NLYFTYLFVLRAVGRYRDVLLHYDFETGNAADDARASTILKSLFDVDNQAYNASCRAPSDSRAVLFGFNETMLFSKSMVNNLFLHPVDVE--------------------RQRRQFTQKFENISRIMDCVTCEKCRLWGKIQVLGLGTAIKIL-------LADNVADMAP----------------LHRNEMIALINVLHRLSESVEGVTRFRQLELE 452
[Close]
BLAST of mRNA_M-pyrifera_M_contig65522.15928.1 vs. uniprot
Match: A0A7R9U445_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U445_9STRA)

HSP 1 Score: 108 bits (269), Expect = 9.940e-24
Identity = 73/220 (33.18%), Postives = 107/220 (48.64%), Query Frame = 1 
Query:    1 NLYVTYLFVARAIHRASPLLTHMTFATGKEEEDARARALVAQLVRGEGRSKEAVE---------RVQSGFNETRLFSLTPAEIAAACPPVVHGLEDLAALQTRMQSALERKLRLRDLFREKFRNISRIMDCVDCHRCRLWGKVQFMGIGTAMAILFGDAAEHLHDHLVEETPDGGIRLLDQRGKVMLDLRHNAVVALFNVFHRLAESVAFAQQHRTLAIQ 633
            NLY  YLF+ RAI +  P L    + TG  E+D   R+L+  LV   G     +          R   GF+ET +F+   +++A          +D    Q   +   E  ++L+   ++KF+NISRIMDCV C +CRLWGK+Q +G+GTA+ ILF +    LH                           N V+AL NV H++++SVAF Q  R + I+
Sbjct:  314 NLYFLYLFLLRAITKGGPDLLAHNYTTGNIEDDRFTRSLMTTLVAASGDEASEISSSLASADVPRCCHGFDETAMFAGWGSDLAT---------DDKHRDQDWWEERSE-NMKLKVQLQQKFQNISRIMDCVGCEKCRLWGKLQVLGVGTALKILFSEGDVQLH--------------------------RNEVIALINVAHQVSKSVAFVQAARDIEIE 497
[Close]
BLAST of mRNA_M-pyrifera_M_contig65522.15928.1 vs. uniprot
Match: A0A7S1TVZ6_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TVZ6_9STRA)

HSP 1 Score: 107 bits (268), Expect = 1.600e-23
Identity = 78/225 (34.67%), Postives = 104/225 (46.22%), Query Frame = 1 
Query:    1 NLYVTYLFVARAIHRASPLLTHMTFATGKEEEDARARALVAQLV-------------RGEGRSKEA-VERVQSGFNETRLFSLTPAEIAAACPPVVHGLEDLAALQTRMQSALERKLRLRDLFREKFRNISRIMDCVDCHRCRLWGKVQFMGIGTAMAILFGDAAEHLHDHLVEETPDGGIRLLDQRGKVMLDLRHNAVVALFNVFHRLAESVAFAQQHRTLAIQ 633
            NLY  YLF+ RAI +ASP LT   + TG    D R   LV++LV             +  G  + A V R   GF+E+R+F      +    P      E    +Q R Q  L            KF+NISRIMDCV C +CRLWGK+Q MGIGTA  +LF D                            ++L  N ++AL N+ H++A+SVAF    R + +Q
Sbjct:  370 NLYFLYLFLLRAITKASPALTSYDYTTGNVAADKRTAELVSELVAASDDAGAGAVPSQASGSVEGADVPRCCHGFDESRMFGGWSGGVE---PDEKWWSEHSETVQLRAQLQL------------KFQNISRIMDCVGCEKCRLWGKLQIMGIGTAFKVLFAD------------------------DPAAVELHRNEIIALINLAHQVAKSVAFVAHARDVEVQ 555
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig65522.15928.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S1CNX9_9STRA1.860e-4243.60Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
A0A812J8H1_9DINO4.600e-3338.43AERO1 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=2... [more]
A0A5A8EBK6_CAFRO1.080e-3243.07Uncharacterized protein n=5 Tax=Sar TaxID=2698737 ... [more]
A0A7S2DCT6_9STRA1.500e-2738.76Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A024UB18_9STRA4.440e-2636.70Uncharacterized protein n=2 Tax=Aphanomyces invada... [more]
A0A6G0XA54_9STRA2.160e-2537.21Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A485KZ54_9STRA2.580e-2538.07Aste57867_13825 protein n=1 Tax=Aphanomyces stella... [more]
A0A3R7C0H9_9STRA3.130e-2536.24Uncharacterized protein n=9 Tax=Aphanomyces astaci... [more]
A0A7R9U445_9STRA9.940e-2433.18Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A7S1TVZ6_9STRA1.600e-2334.67Hypothetical protein n=2 Tax=Phaeomonas parva TaxI... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig65522contigM-pyrifera_M_contig65522:691..1323 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score115.5
Seed ortholog evalue2.9e-23
Seed eggNOG ortholog157072.XP_008868476.1
Preferred nameERO1LB
KEGG koko:K10950,ko:K10976
KEGG Pathwayko04141,ko05110,map04141,map05110
Hectar predicted targeting categoryother localisation
GOsGO:0001666,GO:0003674,GO:0003756,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005788,GO:0005789,GO:0006082,GO:0006457,GO:0006458,GO:0006464,GO:0006508,GO:0006518,GO:0006520,GO:0006575,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0006816,GO:0006873,GO:0006874,GO:0006875,GO:0006915,GO:0006950,GO:0006979,GO:0006986,GO:0007154,GO:0007165,GO:0007204,GO:0007275,GO:0007568,GO:0008150,GO:0008152,GO:0008219,GO:0008593,GO:0009266,GO:0009628,GO:0009966,GO:0009987,GO:0010033,GO:0010260,GO:0010467,GO:0010646,GO:0010817,GO:0012501,GO:0012505,GO:0015035,GO:0015036,GO:0016020,GO:0016021,GO:0016043,GO:0016485,GO:0016486,GO:0016491,GO:0016667,GO:0016670,GO:0016853,GO:0016860,GO:0016864,GO:0016972,GO:0019471,GO:0019538,GO:0019725,GO:0019752,GO:0022417,GO:0023051,GO:0023052,GO:0030001,GO:0030003,GO:0030070,GO:0030154,GO:0030176,GO:0030198,GO:0030425,GO:0030968,GO:0031224,GO:0031227,GO:0031974,GO:0031984,GO:0032501,GO:0032502,GO:0032879,GO:0033500,GO:0033554,GO:0034220,GO:0034599,GO:0034620,GO:0034641,GO:0034975,GO:0034976,GO:0035556,GO:0035966,GO:0035967,GO:0036211,GO:0036293,GO:0036294,GO:0036477,GO:0042175,GO:0042221,GO:0042445,GO:0042592,GO:0042593,GO:0042995,GO:0043005,GO:0043062,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043436,GO:0043603,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044281,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044444,GO:0044446,GO:0044463,GO:0044464,GO:0045444,GO:0045454,GO:0048513,GO:0048519,GO:0048523,GO:0048583,GO:0048731,GO:0048856,GO:0048869,GO:0048878,GO:0050789,GO:0050794,GO:0050801,GO:0050873,GO:0050896,GO:0051082,GO:0051084,GO:0051085,GO:0051179,GO:0051209,GO:0051234,GO:0051282,GO:0051283,GO:0051480,GO:0051604,GO:0051641,GO:0051649,GO:0051716,GO:0055065,GO:0055074,GO:0055080,GO:0055082,GO:0055085,GO:0055114,GO:0060401,GO:0060402,GO:0061077,GO:0065007,GO:0065008,GO:0070013,GO:0070059,GO:0070482,GO:0070588,GO:0070838,GO:0070887,GO:0071310,GO:0071453,GO:0071456,GO:0071704,GO:0071840,GO:0072503,GO:0072507,GO:0072511,GO:0097190,GO:0097193,GO:0097447,GO:0097458,GO:0097553,GO:0098655,GO:0098660,GO:0098662,GO:0098771,GO:0098827,GO:0120025,GO:0120038,GO:0140096,GO:1901142,GO:1901564,GO:1901605
EggNOG free text desc.protein folding in endoplasmic reticulum
EggNOG OGsCOG5061@1,KOG2608@2759
COG Functional cat.OU
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Exons1
Model size633
Cds size633
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816543.249489-CDS-M-pyrifera_M_contig65522:690..13231622816543.249489-CDS-M-pyrifera_M_contig65522:690..1323Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig65522 691..1323 -
1692278037.298771-CDS-M-pyrifera_M_contig65522:690..13231692278037.298771-CDS-M-pyrifera_M_contig65522:690..1323Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig65522 691..1323 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig65522.15928.1prot_M-pyrifera_M_contig65522.15928.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig65522 691..1323 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig65522.15928.1

>prot_M-pyrifera_M_contig65522.15928.1 ID=prot_M-pyrifera_M_contig65522.15928.1|Name=mRNA_M-pyrifera_M_contig65522.15928.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=211bp
NLYVTYLFVARAIHRASPLLTHMTFATGKEEEDARARALVAQLVRGEGRS
KEAVERVQSGFNETRLFSLTPAEIAAACPPVVHGLEDLAALQTRMQSALE
RKLRLRDLFREKFRNISRIMDCVDCHRCRLWGKVQFMGIGTAMAILFGDA
AEHLHDHLVEETPDGGIRLLDQRGKVMLDLRHNAVVALFNVFHRLAESVA
FAQQHRTLAIQ
back to top

mRNA from alignment at M-pyrifera_M_contig65522:691..1323-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig65522.15928.1 ID=mRNA_M-pyrifera_M_contig65522.15928.1|Name=mRNA_M-pyrifera_M_contig65522.15928.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=633bp|location=Sequence derived from alignment at M-pyrifera_M_contig65522:691..1323- (Macrocystis pyrifera P11B4 male)
AACCTCTACGTCACCTACCTGTTTGTGGCACGAGCGATTCACCGCGCATC
TCCTTTGCTGACACACATGACTTTTGCGACTGGGAAGGAGGAGGAGGATG
CGAGAGCAAGGGCGTTGGTGGCGCAGCTGGTGCGAGGCGAGGGCAGGAGC
AAGGAGGCGGTGGAGAGAGTGCAGTCTGGGTTCAATGAGACGCGGCTCTT
CTCCCTCACTCCCGCAGAAATCGCAGCAGCTTGTCCCCCAGTGGTGCACG
GGTTGGAAGACTTGGCGGCGTTGCAGACTCGGATGCAGAGTGCGCTGGAG
CGGAAATTGCGACTGCGCGATTTGTTCCGCGAAAAGTTCCGCAATATCTC
CCGCATCATGGACTGCGTCGACTGCCACCGCTGCAGGCTGTGGGGCAAAG
TCCAGTTCATGGGCATCGGAACCGCAATGGCAATCCTCTTTGGAGACGCA
GCAGAACATCTCCATGACCACCTCGTGGAAGAGACGCCAGACGGAGGCAT
TCGACTCCTCGACCAACGAGGAAAAGTCATGCTAGACCTGCGACACAATG
CAGTCGTCGCTCTCTTCAACGTCTTCCATCGCCTCGCTGAATCTGTCGCA
TTCGCACAACAACACAGAACACTTGCTATTCAG
back to top

Coding sequence (CDS) from alignment at M-pyrifera_M_contig65522:691..1323-

>mRNA_M-pyrifera_M_contig65522.15928.1 ID=mRNA_M-pyrifera_M_contig65522.15928.1|Name=mRNA_M-pyrifera_M_contig65522.15928.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1266bp|location=Sequence derived from alignment at M-pyrifera_M_contig65522:691..1323- (Macrocystis pyrifera P11B4 male)
AACCTCTACGTCACCTACCTGTTTGTGGCACGAGCGATTCACCGCGCATC
TCCTTTGCTGACACACATGACTTTTGCGACTGGGAAGGAGGAGGAGGATG
CGAGAGCAAGGGCGTTGGTGGCGCAGCTGGTGCGAGGCGAGGGCAGGAGC
AAGGAGGCGGTGGAGAGAGTGCAGTCTGGGTTCAATGAGACGCGGCTCTT
CTCCCTCACTCCCGCAGAAATCGCAGCAGCTTGTCCCCCAGTGGTGCACG
GGTTGGAAGACTTGGCGGCGTTGCAGACTCGGATGCAGAGTGCGCTGGAG
CGGAAATTGCGACTGCGCGATTTGTTCCGCGAAAAGTTCCGCAATATCTC
CCGCATCATGGACTGCGTCGACTGCCACCGCTGCAGGCTGTGGGGCAAAG
TCCAGTTCATGGGCATCGGAACCGCAATGGCAATCCTCTTTGGAGACGCA
GCAGAACATCTCCATGACCACCTCGTGGAAGAGACGCCAGACGGAGGCAT
TCGACTCCTCGACCAACGAGGAAAAGTCATGCTAGACCTGCGACACAATG
CAGTCGTCGCTCTCTTCAACGTCTTCCATCGCCTCGCTGAATCTGTCGCA
TTCGCACAACAACACAGAACACTTGCTATTCAGAACCTCTACGTCACCTA
CCTGTTTGTGGCACGAGCGATTCACCGCGCATCTCCTTTGCTGACACACA
TGACTTTTGCGACTGGGAAGGAGGAGGAGGATGCGAGAGCAAGGGCGTTG
GTGGCGCAGCTGGTGCGAGGCGAGGGCAGGAGCAAGGAGGCGGTGGAGAG
AGTGCAGTCTGGGTTCAATGAGACGCGGCTCTTCTCCCTCACTCCCGCAG
AAATCGCAGCAGCTTGTCCCCCAGTGGTGCACGGGTTGGAAGACTTGGCG
GCGTTGCAGACTCGGATGCAGAGTGCGCTGGAGCGGAAATTGCGACTGCG
CGATTTGTTCCGCGAAAAGTTCCGCAATATCTCCCGCATCATGGACTGCG
TCGACTGCCACCGCTGCAGGCTGTGGGGCAAAGTCCAGTTCATGGGCATC
GGAACCGCAATGGCAATCCTCTTTGGAGACGCAGCAGAACATCTCCATGA
CCACCTCGTGGAAGAGACGCCAGACGGAGGCATTCGACTCCTCGACCAAC
GAGGAAAAGTCATGCTAGACCTGCGACACAATGCAGTCGTCGCTCTCTTC
AACGTCTTCCATCGCCTCGCTGAATCTGTCGCATTCGCACAACAACACAG
AACACTTGCTATTCAG
back to top