mRNA_M-pyrifera_M_contig13893.6098.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_M-pyrifera_M_contig13893.6098.1
Unique Name	mRNA_M-pyrifera_M_contig13893.6098.1
Type	mRNA
Organism	Macrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))

Homology

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BLAST of mRNA_M-pyrifera_M_contig13893.6098.1 vs. uniprot
Match: TBB5_ECTVR (Tubulin beta-5 chain n=44 Tax=Eukaryota TaxID=2759 RepID=TBB5_ECTVR)

HSP 1 Score: 654 bits (1686), Expect = 2.240e-235
Identity = 315/315 (100.00%), Postives = 315/315 (100.00%), Query Frame = 1

Query:   10 QIGSKFWEVISDEHGIDPTGSYHGDSDLQLERINCYFNEATGGRYVPRAILMDLEPGTMDSVRAGPFGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCDALQGFQLTHSMGGGTGAGMGTLLISKVREEYPDRVMSTYSVIPSPKVSDTVVEPYNATLSVHQLVENADQCFTLDNEALYDICFRTLKLTTPTYGDLNHLVSAAICGTTCSLRFPGQLNCDLRKLAVNMVPFPRLHFFMIGFAPLTSRGSQQYRALTVPELTQQCFDSKNMMCAADPRHGRYLTCAVMFRGRMSTKEVDEQ 954
            QIGSKFWEVISDEHGIDPTGSYHGDSDLQLERINCYFNEATGGRYVPRAILMDLEPGTMDSVRAGPFGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCDALQGFQLTHSMGGGTGAGMGTLLISKVREEYPDRVMSTYSVIPSPKVSDTVVEPYNATLSVHQLVENADQCFTLDNEALYDICFRTLKLTTPTYGDLNHLVSAAICGTTCSLRFPGQLNCDLRKLAVNMVPFPRLHFFMIGFAPLTSRGSQQYRALTVPELTQQCFDSKNMMCAADPRHGRYLTCAVMFRGRMSTKEVDEQ
Sbjct:   15 QIGSKFWEVISDEHGIDPTGSYHGDSDLQLERINCYFNEATGGRYVPRAILMDLEPGTMDSVRAGPFGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCDALQGFQLTHSMGGGTGAGMGTLLISKVREEYPDRVMSTYSVIPSPKVSDTVVEPYNATLSVHQLVENADQCFTLDNEALYDICFRTLKLTTPTYGDLNHLVSAAICGTTCSLRFPGQLNCDLRKLAVNMVPFPRLHFFMIGFAPLTSRGSQQYRALTVPELTQQCFDSKNMMCAADPRHGRYLTCAVMFRGRMSTKEVDEQ 329

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BLAST of mRNA_M-pyrifera_M_contig13893.6098.1 vs. uniprot
Match: Q5G924_9STRA (Tubulin beta chain (Fragment) n=3 Tax=Ochrophyta TaxID=2696291 RepID=Q5G924_9STRA)

HSP 1 Score: 630 bits (1624), Expect = 1.290e-226
Identity = 300/315 (95.24%), Postives = 310/315 (98.41%), Query Frame = 1

Query:   10 QIGSKFWEVISDEHGIDPTGSYHGDSDLQLERINCYFNEATGGRYVPRAILMDLEPGTMDSVRAGPFGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCDALQGFQLTHSMGGGTGAGMGTLLISKVREEYPDRVMSTYSVIPSPKVSDTVVEPYNATLSVHQLVENADQCFTLDNEALYDICFRTLKLTTPTYGDLNHLVSAAICGTTCSLRFPGQLNCDLRKLAVNMVPFPRLHFFMIGFAPLTSRGSQQYRALTVPELTQQCFDSKNMMCAADPRHGRYLTCAVMFRGRMSTKEVDEQ 954
            QIG+KFWEVI+DEHG+DPTG+YHGDSDLQLERIN YFNEATGGRYVPRAILMDLEPGTMDSVRAGPFGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCD LQGFQ+THSMGGGTG+GMGTLLISK+REEYPDRVMST+SVIPSPKVSDTVVEPYNATLSVHQLVENADQCFTLDNEALYDICFRTLKLTTPTYGDLNHLVSAAICGTTC LRFPGQLNCDLRKLAVNMVPFPRLHFFM+GFAPLTSRGSQQYRALTVPELTQQ FD+KNMMCAADPRHGRYLTCA MFRGRMSTKEVDEQ
Sbjct:    8 QIGAKFWEVIADEHGVDPTGTYHGDSDLQLERINVYFNEATGGRYVPRAILMDLEPGTMDSVRAGPFGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCDCLQGFQMTHSMGGGTGSGMGTLLISKIREEYPDRVMSTFSVIPSPKVSDTVVEPYNATLSVHQLVENADQCFTLDNEALYDICFRTLKLTTPTYGDLNHLVSAAICGTTCCLRFPGQLNCDLRKLAVNMVPFPRLHFFMMGFAPLTSRGSQQYRALTVPELTQQQFDAKNMMCAADPRHGRYLTCACMFRGRMSTKEVDEQ 322

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BLAST of mRNA_M-pyrifera_M_contig13893.6098.1 vs. uniprot
Match: C0SK85_PARIM (Tubulin beta chain (Fragment) n=13 Tax=Ochrophyta TaxID=2696291 RepID=C0SK85_PARIM)

HSP 1 Score: 628 bits (1619), Expect = 4.120e-226
Identity = 299/315 (94.92%), Postives = 309/315 (98.10%), Query Frame = 1

Query:   10 QIGSKFWEVISDEHGIDPTGSYHGDSDLQLERINCYFNEATGGRYVPRAILMDLEPGTMDSVRAGPFGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCDALQGFQLTHSMGGGTGAGMGTLLISKVREEYPDRVMSTYSVIPSPKVSDTVVEPYNATLSVHQLVENADQCFTLDNEALYDICFRTLKLTTPTYGDLNHLVSAAICGTTCSLRFPGQLNCDLRKLAVNMVPFPRLHFFMIGFAPLTSRGSQQYRALTVPELTQQCFDSKNMMCAADPRHGRYLTCAVMFRGRMSTKEVDEQ 954
            QIG+KFWEVISDEHG+DPTG+YHGDSDLQLERIN Y+NEATGGRYVPRAILMDLEPGTMDSVRAGPFGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAES D LQGFQ+THSMGGGTG+GMGTLLISK+REEYPDR+MSTYSVIPSPKVSDTVVEPYNATLSVHQLVENADQCFTLDNEALYDICFRTLKLTTPTYGDLNHLVSAAICGTTC LRFPGQLNCDLRKLAVNM+PFPRLHFFMIGFAPLTSRGSQQYRALTVPELTQQ FD+KNMMCAADPRHGRYLTCA MFRGRMSTKEVDEQ
Sbjct:    7 QIGAKFWEVISDEHGVDPTGTYHGDSDLQLERINVYYNEATGGRYVPRAILMDLEPGTMDSVRAGPFGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESSDCLQGFQMTHSMGGGTGSGMGTLLISKIREEYPDRIMSTYSVIPSPKVSDTVVEPYNATLSVHQLVENADQCFTLDNEALYDICFRTLKLTTPTYGDLNHLVSAAICGTTCCLRFPGQLNCDLRKLAVNMIPFPRLHFFMIGFAPLTSRGSQQYRALTVPELTQQQFDAKNMMCAADPRHGRYLTCACMFRGRMSTKEVDEQ 321

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BLAST of mRNA_M-pyrifera_M_contig13893.6098.1 vs. uniprot
Match: A0A7S2DBE6_9STRA (Tubulin beta chain n=6 Tax=Sar TaxID=2698737 RepID=A0A7S2DBE6_9STRA)

HSP 1 Score: 630 bits (1625), Expect = 5.050e-226
Identity = 300/315 (95.24%), Postives = 309/315 (98.10%), Query Frame = 1

Query:   10 QIGSKFWEVISDEHGIDPTGSYHGDSDLQLERINCYFNEATGGRYVPRAILMDLEPGTMDSVRAGPFGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCDALQGFQLTHSMGGGTGAGMGTLLISKVREEYPDRVMSTYSVIPSPKVSDTVVEPYNATLSVHQLVENADQCFTLDNEALYDICFRTLKLTTPTYGDLNHLVSAAICGTTCSLRFPGQLNCDLRKLAVNMVPFPRLHFFMIGFAPLTSRGSQQYRALTVPELTQQCFDSKNMMCAADPRHGRYLTCAVMFRGRMSTKEVDEQ 954
            QIG+KFWEVISDEHG+DPTG+YHGDSDLQLERIN Y+NEATGGRYVPRAILMDLEPGTMDSVRAGPFGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCD LQGFQLTHSMGGGTG+GMGTLLISK+REEYPDRVM+TYSVIPSPKVSDTVVEPYNATLSVHQLVENADQCF LDNEALYDICFRTLKLTTPTYGDLNHLVSAAICGTTC LRFPGQLNCDLRKLAVNMVPFPRLHFFM+GFAPLTSRGSQQYRALTVPELTQQ FD+KNMMCAADPRHGRYLTCA MFRGRMSTKEVDEQ
Sbjct:   23 QIGAKFWEVISDEHGVDPTGTYHGDSDLQLERINVYYNEATGGRYVPRAILMDLEPGTMDSVRAGPFGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCDCLQGFQLTHSMGGGTGSGMGTLLISKIREEYPDRVMTTYSVIPSPKVSDTVVEPYNATLSVHQLVENADQCFALDNEALYDICFRTLKLTTPTYGDLNHLVSAAICGTTCGLRFPGQLNCDLRKLAVNMVPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQQFDAKNMMCAADPRHGRYLTCACMFRGRMSTKEVDEQ 337

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BLAST of mRNA_M-pyrifera_M_contig13893.6098.1 vs. uniprot
Match: A9LGL0_9STRA (Tubulin beta chain (Fragment) n=3 Tax=Chrysophyceae TaxID=2825 RepID=A9LGL0_9STRA)

HSP 1 Score: 622 bits (1603), Expect = 3.330e-224
Identity = 298/311 (95.82%), Postives = 304/311 (97.75%), Query Frame = 1

Query:   22 KFWEVISDEHGIDPTGSYHGDSDLQLERINCYFNEATGGRYVPRAILMDLEPGTMDSVRAGPFGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCDALQGFQLTHSMGGGTGAGMGTLLISKVREEYPDRVMSTYSVIPSPKVSDTVVEPYNATLSVHQLVENADQCFTLDNEALYDICFRTLKLTTPTYGDLNHLVSAAICGTTCSLRFPGQLNCDLRKLAVNMVPFPRLHFFMIGFAPLTSRGSQQYRALTVPELTQQCFDSKNMMCAADPRHGRYLTCAVMFRGRMSTKEVDEQ 954
            KFWEVISD HG+DPTG+YHGDSDLQLERIN YFNEATGGRYVPRAILMDLEPGTMDSVRAGPFGQLFRPDN VFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCD LQGFQLTHSMGGGTG+GMGTLLISK+REEYPDRVMSTYSVIPSPKVSDTVVEPYNATLSVHQLVENADQCFTLDNEALYDICFRTLKLTTPTYGDLNHLVSAAICGTTC LRFPGQLNCDLRKLAVNMVPFPRLHFFM+GFAPLTSRGSQQYRALTVPELTQQ FD+KNMMCAADPRHGRYLTCA MFRGRMSTKEVDEQ
Sbjct:    1 KFWEVISDGHGVDPTGTYHGDSDLQLERINVYFNEATGGRYVPRAILMDLEPGTMDSVRAGPFGQLFRPDNLVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCDCLQGFQLTHSMGGGTGSGMGTLLISKIREEYPDRVMSTYSVIPSPKVSDTVVEPYNATLSVHQLVENADQCFTLDNEALYDICFRTLKLTTPTYGDLNHLVSAAICGTTCCLRFPGQLNCDLRKLAVNMVPFPRLHFFMMGFAPLTSRGSQQYRALTVPELTQQQFDAKNMMCAADPRHGRYLTCACMFRGRMSTKEVDEQ 311

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BLAST of mRNA_M-pyrifera_M_contig13893.6098.1 vs. uniprot
Match: F0Y8A1_AURAN (Uncharacterized protein n=4 Tax=Sar TaxID=2698737 RepID=F0Y8A1_AURAN)

HSP 1 Score: 630 bits (1625), Expect = 6.430e-222
Identity = 298/315 (94.60%), Postives = 311/315 (98.73%), Query Frame = 1

Query:   10 QIGSKFWEVISDEHGIDPTGSYHGDSDLQLERINCYFNEATGGRYVPRAILMDLEPGTMDSVRAGPFGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCDALQGFQLTHSMGGGTGAGMGTLLISKVREEYPDRVMSTYSVIPSPKVSDTVVEPYNATLSVHQLVENADQCFTLDNEALYDICFRTLKLTTPTYGDLNHLVSAAICGTTCSLRFPGQLNCDLRKLAVNMVPFPRLHFFMIGFAPLTSRGSQQYRALTVPELTQQCFDSKNMMCAADPRHGRYLTCAVMFRGRMSTKEVDEQ 954
            QIG+KFWEVISDEHG+DPTG+YHGDSDLQLERIN Y+NEATGGRYVPRAILMDLEPGTMDSVRAGPFGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCD LQGFQLTHSMGGGTGAGMGTLLISK+REEYPDRVMSTYSVIPSPKVSDTVVEPYNATLSVHQLVEN+DQCFTLDNEALYDICFRTLKLTTPTYGDLNHL++AA+CGTTCSLRFPGQLNCDLRKLAVNMVPFPRLHFFM+GFAPLTSRGSQQYRALTVPELTQQ FD+KNMMCAADPRHGRYLTC+ +FRGRMSTKEVDEQ
Sbjct:   15 QIGAKFWEVISDEHGVDPTGTYHGDSDLQLERINVYYNEATGGRYVPRAILMDLEPGTMDSVRAGPFGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCDCLQGFQLTHSMGGGTGAGMGTLLISKIREEYPDRVMSTYSVIPSPKVSDTVVEPYNATLSVHQLVENSDQCFTLDNEALYDICFRTLKLTTPTYGDLNHLIAAALCGTTCSLRFPGQLNCDLRKLAVNMVPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQQFDAKNMMCAADPRHGRYLTCSCLFRGRMSTKEVDEQ 329

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BLAST of mRNA_M-pyrifera_M_contig13893.6098.1 vs. uniprot
Match: G3ET98_9BIVA (Tubulin beta chain (Fragment) n=3 Tax=Eukaryota TaxID=2759 RepID=G3ET98_9BIVA)

HSP 1 Score: 608 bits (1567), Expect = 1.650e-219
Identity = 290/306 (94.77%), Postives = 300/306 (98.04%), Query Frame = 1

Query:   37 ISDEHGIDPTGSYHGDSDLQLERINCYFNEATGGRYVPRAILMDLEPGTMDSVRAGPFGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCDALQGFQLTHSMGGGTGAGMGTLLISKVREEYPDRVMSTYSVIPSPKVSDTVVEPYNATLSVHQLVENADQCFTLDNEALYDICFRTLKLTTPTYGDLNHLVSAAICGTTCSLRFPGQLNCDLRKLAVNMVPFPRLHFFMIGFAPLTSRGSQQYRALTVPELTQQCFDSKNMMCAADPRHGRYLTCAVMFRGRMSTKEVDEQ 954
            ISDEHG+DPTG+YHGDSDLQLERIN YFNEATGGRYVPRAILMDLEPGTMDSVRAGPFGQLFRPDNFVFGQ GAGNNWAKGHYTEGAELIDSVLDVVRKEAESCD LQGFQLTHSMGGGTGAGMGTLLISK+REEYPDRVM+T+SVIPSPKVSDTVVEPYN TLSVHQLVEN+DQCF+LDNEALYDICFRTLKLTTPTYGDLNHLVSAAICGTTCSLRFPGQLNCDLRKLAVNMVPFPRLHFFM+GFAPLTSRGSQQYRALTVPELTQQ FD+KNMMCAADPRHGRYLTCA +FRGRMSTKEVDEQ
Sbjct:    1 ISDEHGVDPTGTYHGDSDLQLERINVYFNEATGGRYVPRAILMDLEPGTMDSVRAGPFGQLFRPDNFVFGQNGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCDCLQGFQLTHSMGGGTGAGMGTLLISKIREEYPDRVMTTFSVIPSPKVSDTVVEPYNCTLSVHQLVENSDQCFSLDNEALYDICFRTLKLTTPTYGDLNHLVSAAICGTTCSLRFPGQLNCDLRKLAVNMVPFPRLHFFMMGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMCAADPRHGRYLTCACIFRGRMSTKEVDEQ 306

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BLAST of mRNA_M-pyrifera_M_contig13893.6098.1 vs. uniprot
Match: C0SKD5_9STRA (Tubulin beta chain (Fragment) n=1 Tax=Thalassiosira tumida TaxID=340023 RepID=C0SKD5_9STRA)

HSP 1 Score: 608 bits (1568), Expect = 6.920e-219
Identity = 287/306 (93.79%), Postives = 301/306 (98.37%), Query Frame = 1

Query:   37 ISDEHGIDPTGSYHGDSDLQLERINCYFNEATGGRYVPRAILMDLEPGTMDSVRAGPFGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCDALQGFQLTHSMGGGTGAGMGTLLISKVREEYPDRVMSTYSVIPSPKVSDTVVEPYNATLSVHQLVENADQCFTLDNEALYDICFRTLKLTTPTYGDLNHLVSAAICGTTCSLRFPGQLNCDLRKLAVNMVPFPRLHFFMIGFAPLTSRGSQQYRALTVPELTQQCFDSKNMMCAADPRHGRYLTCAVMFRGRMSTKEVDEQ 954
            +SDEHG+DPTG+YHGDSDLQLERIN YFNEATGGRYVPRAILMDLEPGTMDSVRAGPFGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLD+VRKEAESCD +QGFQLTHS+GGGTGAGMGTLLISK+REEYPDRVMSTYSVIPSPKVSDTVVEPYNATLSVHQLVENADQCF LDNEALYDICFRTLKLTTPTYGDLNHL++AAICGTTC LRFPGQLNCDLRKLAVNMVPFPRLHFFM+G+APLTSRGSQQYRALTVPELTQQ FD+KNMMCAADPRHGRYLTCAV+FRGRMS+KEVDEQ
Sbjct:    1 MSDEHGVDPTGTYHGDSDLQLERINVYFNEATGGRYVPRAILMDLEPGTMDSVRAGPFGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDIVRKEAESCDCMQGFQLTHSLGGGTGAGMGTLLISKIREEYPDRVMSTYSVIPSPKVSDTVVEPYNATLSVHQLVENADQCFALDNEALYDICFRTLKLTTPTYGDLNHLIAAAICGTTCCLRFPGQLNCDLRKLAVNMVPFPRLHFFMVGYAPLTSRGSQQYRALTVPELTQQVFDAKNMMCAADPRHGRYLTCAVLFRGRMSSKEVDEQ 306

[Close]

BLAST of mRNA_M-pyrifera_M_contig13893.6098.1 vs. uniprot
Match: G3ETA5_9BIVA (Tubulin beta chain (Fragment) n=2 Tax=Eukaryota TaxID=2759 RepID=G3ETA5_9BIVA)

HSP 1 Score: 602 bits (1553), Expect = 2.340e-217
Identity = 287/305 (94.10%), Postives = 298/305 (97.70%), Query Frame = 1

Query:   40 SDEHGIDPTGSYHGDSDLQLERINCYFNEATGGRYVPRAILMDLEPGTMDSVRAGPFGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCDALQGFQLTHSMGGGTGAGMGTLLISKVREEYPDRVMSTYSVIPSPKVSDTVVEPYNATLSVHQLVENADQCFTLDNEALYDICFRTLKLTTPTYGDLNHLVSAAICGTTCSLRFPGQLNCDLRKLAVNMVPFPRLHFFMIGFAPLTSRGSQQYRALTVPELTQQCFDSKNMMCAADPRHGRYLTCAVMFRGRMSTKEVDEQ 954
            SDEHG+DPTG+YHGDSDLQLERIN Y+NEATGGRYVPRAILMDLEPGTMDSVRAGPFGQLFRPDNFVFGQ+GAGNNWAKGHYTEGAELIDSVLDVVRKEAES D LQGFQ THS+GGGTG+GMGTLLISK+REEYPDR+MST+SVIPSPKVSDTVVEPYN TLSVHQLVENADQCFTLDNEALYDICFRTLKLTTPTYGDLNHLVSAAICGTTCSLRFPGQLNCDLRKLAVNM+PFPRLHFFMIGFAPLTSRGSQQYRALTVPELTQQ FD+KNMMCAADPRHGRYLTCA MFRGRMSTKEVDEQ
Sbjct:    2 SDEHGVDPTGTYHGDSDLQLERINVYYNEATGGRYVPRAILMDLEPGTMDSVRAGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAESSDCLQGFQFTHSLGGGTGSGMGTLLISKIREEYPDRIMSTFSVIPSPKVSDTVVEPYNCTLSVHQLVENADQCFTLDNEALYDICFRTLKLTTPTYGDLNHLVSAAICGTTCSLRFPGQLNCDLRKLAVNMIPFPRLHFFMIGFAPLTSRGSQQYRALTVPELTQQQFDAKNMMCAADPRHGRYLTCACMFRGRMSTKEVDEQ 306

[Close]

BLAST of mRNA_M-pyrifera_M_contig13893.6098.1 vs. uniprot
Match: L1IEU9_GUITC (Tubulin beta chain n=18 Tax=Eukaryota TaxID=2759 RepID=L1IEU9_GUITC)

HSP 1 Score: 604 bits (1558), Expect = 6.450e-216
Identity = 283/315 (89.84%), Postives = 304/315 (96.51%), Query Frame = 1

Query:   10 QIGSKFWEVISDEHGIDPTGSYHGDSDLQLERINCYFNEATGGRYVPRAILMDLEPGTMDSVRAGPFGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCDALQGFQLTHSMGGGTGAGMGTLLISKVREEYPDRVMSTYSVIPSPKVSDTVVEPYNATLSVHQLVENADQCFTLDNEALYDICFRTLKLTTPTYGDLNHLVSAAICGTTCSLRFPGQLNCDLRKLAVNMVPFPRLHFFMIGFAPLTSRGSQQYRALTVPELTQQCFDSKNMMCAADPRHGRYLTCAVMFRGRMSTKEVDEQ 954
            QIG+KFWEVISDEHG+DPTG+YHGDSDLQLERIN YFNEATGGRYVPRA+LMDLEPGTMDSVRAGP+GQ+FRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCD LQGFQ++HS+GGGTGAGMGTLLISK+REEYPDR+M T+S++PSPKVSDTVVEPYNATLSVHQLVENAD+CF +DNEALYDICFRTLKLTTPT+GDLNHLVSA + G TCSLRFPGQLN DLRKLAVN+VPFPRLHFFM+GFAPLTSRGSQQYRALTVPELTQQ FD+KNMMCAADPRHGRYLT A MFRGRMSTKEVDEQ
Sbjct:   15 QIGAKFWEVISDEHGVDPTGTYHGDSDLQLERINVYFNEATGGRYVPRAVLMDLEPGTMDSVRAGPYGQIFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCDCLQGFQISHSLGGGTGAGMGTLLISKIREEYPDRIMLTFSIVPSPKVSDTVVEPYNATLSVHQLVENADECFCIDNEALYDICFRTLKLTTPTFGDLNHLVSAVMSGVTCSLRFPGQLNSDLRKLAVNIVPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMCAADPRHGRYLTAAAMFRGRMSTKEVDEQ 329

The following BLAST results are available for this feature:

BLAST of mRNA_M-pyrifera_M_contig13893.6098.1 vs. uniprot

BLAST of mRNA_M-pyrifera_M_contig13893.6098.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
TBB5_ECTVR	2.240e-235	100.00	Tubulin beta-5 chain n=44 Tax=Eukaryota TaxID=2759...	[more]
Q5G924_9STRA	1.290e-226	95.24	Tubulin beta chain (Fragment) n=3 Tax=Ochrophyta T...	[more]
C0SK85_PARIM	4.120e-226	94.92	Tubulin beta chain (Fragment) n=13 Tax=Ochrophyta ...	[more]
A0A7S2DBE6_9STRA	5.050e-226	95.24	Tubulin beta chain n=6 Tax=Sar TaxID=2698737 RepID...	[more]
A9LGL0_9STRA	3.330e-224	95.82	Tubulin beta chain (Fragment) n=3 Tax=Chrysophycea...	[more]
F0Y8A1_AURAN	6.430e-222	94.60	Uncharacterized protein n=4 Tax=Sar TaxID=2698737 ...	[more]
G3ET98_9BIVA	1.650e-219	94.77	Tubulin beta chain (Fragment) n=3 Tax=Eukaryota Ta...	[more]
C0SKD5_9STRA	6.920e-219	93.79	Tubulin beta chain (Fragment) n=1 Tax=Thalassiosir...	[more]
G3ETA5_9BIVA	2.340e-217	94.10	Tubulin beta chain (Fragment) n=2 Tax=Eukaryota Ta...	[more]
L1IEU9_GUITC	6.450e-216	89.84	Tubulin beta chain n=18 Tax=Eukaryota TaxID=2759 R...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
M-pyrifera_M_contig13893	contig	M-pyrifera_M_contig13893:6929..7882 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90	2022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male	2021-02-24

Properties


Property Name	Value
Taxonomic scope	Eukaryota
Seed ortholog score	651.4
Seed ortholog evalue	2.2e-184
Seed eggNOG ortholog	2880.D7FNQ3
KEGG ko	ko:K07375
KEGG Pathway	ko04145,ko04540,ko05130,map04145,map04540,map05130
Hectar predicted targeting category	other localisation
GOs	GO:0005575,GO:0005622,GO:0005623,GO:0005856,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044424,GO:0044464
EggNOG free text desc.	structural constituent of cytoskeleton
EggNOG OGs	COG5023@1,KOG1375@2759
COG Functional cat.	Z
Best tax level	Eukaryota
Best eggNOG OG	NA\|NA\|NA
BRITE	ko00000,ko00001,ko03036,ko04147,ko04812
Exons	1
Model size	954
Cds size	954
Stop	0
Start	1

Relationships

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622815828.5106688-CDS-M-pyrifera_M_contig13893:6928..7882	1622815828.5106688-CDS-M-pyrifera_M_contig13893:6928..7882	Macrocystis pyrifera P11B4 male	CDS	M-pyrifera_M_contig13893 6929..7882 +
1692277592.8571556-CDS-M-pyrifera_M_contig13893:6928..7882	1692277592.8571556-CDS-M-pyrifera_M_contig13893:6928..7882	Macrocystis pyrifera P11B4 male	CDS	M-pyrifera_M_contig13893 6929..7882 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_M-pyrifera_M_contig13893.6098.1	prot_M-pyrifera_M_contig13893.6098.1	Macrocystis pyrifera P11B4 male	polypeptide	M-pyrifera_M_contig13893 6929..7882 +

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at M-pyrifera_M_contig13893:6929..7882+
coding sequence from alignment at M-pyrifera_M_contig13893:6929..7882+

protein sequence of mRNA_M-pyrifera_M_contig13893.6098.1

>prot_M-pyrifera_M_contig13893.6098.1 ID=prot_M-pyrifera_M_contig13893.6098.1|Name=mRNA_M-pyrifera_M_contig13893.6098.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=318bp
MCQQIGSKFWEVISDEHGIDPTGSYHGDSDLQLERINCYFNEATGGRYVP
RAILMDLEPGTMDSVRAGPFGQLFRPDNFVFGQTGAGNNWAKGHYTEGAE
LIDSVLDVVRKEAESCDALQGFQLTHSMGGGTGAGMGTLLISKVREEYPD
RVMSTYSVIPSPKVSDTVVEPYNATLSVHQLVENADQCFTLDNEALYDIC
FRTLKLTTPTYGDLNHLVSAAICGTTCSLRFPGQLNCDLRKLAVNMVPFP
RLHFFMIGFAPLTSRGSQQYRALTVPELTQQCFDSKNMMCAADPRHGRYL
TCAVMFRGRMSTKEVDEQ

mRNA from alignment at M-pyrifera_M_contig13893:6929..7882+

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_M-pyrifera_M_contig13893.6098.1 ID=mRNA_M-pyrifera_M_contig13893.6098.1|Name=mRNA_M-pyrifera_M_contig13893.6098.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=954bp|location=Sequence derived from alignment at M-pyrifera_M_contig13893:6929..7882+ (Macrocystis pyrifera P11B4 male)
ATGTGTCAACAGATCGGATCTAAGTTCTGGGAAGTCATCTCCGACGAGCA
CGGCATCGACCCCACCGGATCGTACCATGGTGACTCCGACCTCCAGCTGG
AACGCATCAACTGCTACTTTAACGAGGCCACCGGCGGCCGGTACGTCCCG
CGCGCCATCCTCATGGACCTCGAGCCCGGAACCATGGACTCGGTGCGCGC
GGGCCCTTTCGGCCAGCTCTTCAGGCCTGACAACTTCGTCTTCGGGCAGA
CGGGCGCGGGCAACAACTGGGCCAAGGGCCACTACACGGAGGGGGCAGAG
CTGATCGATTCGGTGCTGGACGTCGTCCGGAAAGAGGCGGAGTCTTGCGA
CGCCCTCCAGGGGTTCCAGCTGACGCACTCCATGGGCGGTGGCACGGGCG
CGGGGATGGGCACCCTACTCATTTCCAAGGTCCGCGAGGAGTACCCCGAC
CGCGTTATGTCGACATACTCCGTCATCCCGTCGCCGAAGGTGTCGGACAC
CGTCGTCGAGCCGTACAACGCCACGCTGTCGGTGCACCAGCTGGTGGAGA
ACGCCGACCAGTGCTTCACGCTCGACAACGAGGCGCTGTACGACATCTGC
TTCCGCACGCTCAAACTCACCACGCCCACCTATGGTGACCTGAACCACCT
TGTGTCGGCGGCCATCTGCGGAACCACCTGCTCCCTGCGCTTCCCGGGCC
AGCTCAACTGCGACCTCCGCAAGCTCGCCGTGAACATGGTGCCCTTCCCC
CGCCTCCACTTCTTCATGATCGGCTTCGCGCCCCTGACCAGCCGCGGCTC
CCAGCAGTACCGCGCGCTGACTGTGCCGGAGCTGACCCAGCAGTGCTTCG
ACTCTAAGAACATGATGTGCGCAGCCGACCCTCGCCACGGGCGGTACCTG
ACGTGTGCCGTGATGTTCCGCGGGCGCATGTCGACGAAGGAAGTAGATGA
GCAG

Coding sequence (CDS) from alignment at M-pyrifera_M_contig13893:6929..7882+

>mRNA_M-pyrifera_M_contig13893.6098.1 ID=mRNA_M-pyrifera_M_contig13893.6098.1|Name=mRNA_M-pyrifera_M_contig13893.6098.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1908bp|location=Sequence derived from alignment at M-pyrifera_M_contig13893:6929..7882+ (Macrocystis pyrifera P11B4 male)
ATGTGTCAACAGATCGGATCTAAGTTCTGGGAAGTCATCTCCGACGAGCA
CGGCATCGACCCCACCGGATCGTACCATGGTGACTCCGACCTCCAGCTGG
AACGCATCAACTGCTACTTTAACGAGGCCACCGGCGGCCGGTACGTCCCG
CGCGCCATCCTCATGGACCTCGAGCCCGGAACCATGGACTCGGTGCGCGC
GGGCCCTTTCGGCCAGCTCTTCAGGCCTGACAACTTCGTCTTCGGGCAGA
CGGGCGCGGGCAACAACTGGGCCAAGGGCCACTACACGGAGGGGGCAGAG
CTGATCGATTCGGTGCTGGACGTCGTCCGGAAAGAGGCGGAGTCTTGCGA
CGCCCTCCAGGGGTTCCAGCTGACGCACTCCATGGGCGGTGGCACGGGCG
CGGGGATGGGCACCCTACTCATTTCCAAGGTCCGCGAGGAGTACCCCGAC
CGCGTTATGTCGACATACTCCGTCATCCCGTCGCCGAAGGTGTCGGACAC
CGTCGTCGAGCCGTACAACGCCACGCTGTCGGTGCACCAGCTGGTGGAGA
ACGCCGACCAGTGCTTCACGCTCGACAACGAGGCGCTGTACGACATCTGC
TTCCGCACGCTCAAACTCACCACGCCCACCTATGGTGACCTGAACCACCT
TGTGTCGGCGGCCATCTGCGGAACCACCTGCTCCCTGCGCTTCCCGGGCC
AGCTCAACTGCGACCTCCGCAAGCTCGCCGTGAACATGGTGCCCTTCCCC
CGCCTCCACTTCTTCATGATCGGCTTCGCGCCCCTGACCAGCCGCGGCTC
CCAGCAGTACCGCGCGCTGACTGTGCCGGAGCTGACCCAGCAGTGCTTCG
ACTCTAAGAACATGATGTGCGCAGCCGACCCTCGCCACGGGCGGTACCTG
ACGTGTGCCGTGATGTTCCGCGGGCGCATGTCGACGAAGGAAGTAGATGA
GCAGATGTGTCAACAGATCGGATCTAAGTTCTGGGAAGTCATCTCCGACG
AGCACGGCATCGACCCCACCGGATCGTACCATGGTGACTCCGACCTCCAG
CTGGAACGCATCAACTGCTACTTTAACGAGGCCACCGGCGGCCGGTACGT
CCCGCGCGCCATCCTCATGGACCTCGAGCCCGGAACCATGGACTCGGTGC
GCGCGGGCCCTTTCGGCCAGCTCTTCAGGCCTGACAACTTCGTCTTCGGG
CAGACGGGCGCGGGCAACAACTGGGCCAAGGGCCACTACACGGAGGGGGC
AGAGCTGATCGATTCGGTGCTGGACGTCGTCCGGAAAGAGGCGGAGTCTT
GCGACGCCCTCCAGGGGTTCCAGCTGACGCACTCCATGGGCGGTGGCACG
GGCGCGGGGATGGGCACCCTACTCATTTCCAAGGTCCGCGAGGAGTACCC
CGACCGCGTTATGTCGACATACTCCGTCATCCCGTCGCCGAAGGTGTCGG
ACACCGTCGTCGAGCCGTACAACGCCACGCTGTCGGTGCACCAGCTGGTG
GAGAACGCCGACCAGTGCTTCACGCTCGACAACGAGGCGCTGTACGACAT
CTGCTTCCGCACGCTCAAACTCACCACGCCCACCTATGGTGACCTGAACC
ACCTTGTGTCGGCGGCCATCTGCGGAACCACCTGCTCCCTGCGCTTCCCG
GGCCAGCTCAACTGCGACCTCCGCAAGCTCGCCGTGAACATGGTGCCCTT
CCCCCGCCTCCACTTCTTCATGATCGGCTTCGCGCCCCTGACCAGCCGCG
GCTCCCAGCAGTACCGCGCGCTGACTGTGCCGGAGCTGACCCAGCAGTGC
TTCGACTCTAAGAACATGATGTGCGCAGCCGACCCTCGCCACGGGCGGTA
CCTGACGTGTGCCGTGATGTTCCGCGGGCGCATGTCGACGAAGGAAGTAG
ATGAGCAG