mRNA_M-pyrifera_M_contig13893.6097.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig13893.6097.1
Unique NamemRNA_M-pyrifera_M_contig13893.6097.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
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BLAST of mRNA_M-pyrifera_M_contig13893.6097.1 vs. uniprot
Match: A0A6H5JST1_9PHAE (TPT domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JST1_9PHAE)

HSP 1 Score: 400 bits (1027), Expect = 5.670e-136
Identity = 207/293 (70.65%), Postives = 240/293 (81.91%), Query Frame = 1 
Query:    1 MVSDKFVMGLYCLVTFTASGLLFGFRKLLLLDSANSRLSKAAEYVRPIEIAAWVSMWYGVSVSMVMANRWLFHEWQGVGFPFPVLTTMIHMWLKFFVSRGIFWSRGNKPPHLDMSVNLRTIIPIGIATAGDILLSNLSFMYVDVTFYTIVKSGSLMWILLWAVAFKFEVMTPGMLYVVGVICLGLFLASWDENDKQFSLPGLLMILGASCFSGLRWALVQLLQQVEPGCIDPLLVIFYISPWSAISMTPMALLDILDEDLTGAHLTPASIGQVAGLILATGMFSFMLIFAEVK 879
            MV+   VMG YCLVTF  + +LFG + LLL D+  SRLSKAA+YV  +EIAAWV  WYGVSVSMVMANRWLF+EWQGVGFPFPVLTTM+HMWLK  V+R ++  +G KPPHLD+SVNLRT+IPIG+ATAGDILLSNLSFM   V FYTIVKSGSL+WILLWAV F+FE +TP M+ VV +  +GLFLAS  E D  FS  GLL+ILGASC SGLRW L+QLLQ +EP C DPLLVI++I+P SAI+MTPMALLDILDE+L GA +TP SI QVA +IL TG+FSF LIFAEVK
Sbjct:    1 MVAKGDVMGAYCLVTFFGASILFGVKHLLLRDATFSRLSKAADYVPAVEIAAWVLTWYGVSVSMVMANRWLFYEWQGVGFPFPVLTTMVHMWLKVLVTRVMYCFKGEKPPHLDVSVNLRTVIPIGLATAGDILLSNLSFMVATVAFYTIVKSGSLIWILLWAVVFRFEALTPKMVSVVLITSVGLFLASLGETD--FSTEGLLLILGASCLSGLRWGLLQLLQAIEPSCHDPLLVIYHIAPSSAIAMTPMALLDILDENLKGAAVTPGSIAQVAVVILGTGLFSFALIFAEVK 291
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BLAST of mRNA_M-pyrifera_M_contig13893.6097.1 vs. uniprot
Match: A0A7S2FM58_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FM58_9STRA)

HSP 1 Score: 177 bits (450), Expect = 3.290e-49
Identity = 114/299 (38.13%), Postives = 174/299 (58.19%), Query Frame = 1 
Query:   31 YCLVTFTASGLLFGFRKLLLLDSANSRLSKAAEYVRPIEIAAWVSMWYGVSVSMVMANRWLFHEWQGVGFPFPVLTTMIHMWLKFFVSRGI-------FWSRGNKPPHLDMSVNLRTIIPIGIATAGDILLSNLSFMYVDVTFYTIVKSGSLMWILLWAVAFKFEVMTPGMLYVVGVICLGLFLASWDENDKQFSLPGLLMILGASCFSGLRWALVQLLQQVEPGCIDPLLVIFYISPWSAISMTPMALLDILDEDLTGAHLTPA-------SIGQVAGLILAT--GMFSFMLIFAEVK 879
            Y  V F+ +G+     ++L   S     +KAA  V+ +++  +V +W+G+SV+  + N+W    W+G GF FP+  T  H+ +K  ++RG+       ++ R  +P  L ++  L+ I PIG  TA D++LSN+SF +V VTFYTIVKS +L+WILLWAV F+ E     +   V VI LGL  AS+ E +  FS+ GLL+++GAS   GLRWAL+Q L  +E    DPL+ +++I+PWS I+M  MA+       + G H+          S   +  L+L    G+ +F+LI AEVK
Sbjct:   13 YSCVAFSLAGMSAVGARVLKHQSRYRPQAKAANLVQMMDVGTYVFLWFGISVTFTLLNKWFLTYWRG-GFSFPITGTTGHIAMKALLARGLVDGRCGKYFERTVEPVPLPLT--LQVIFPIGFMTATDVMLSNVSFKFVTVTFYTIVKSSTLVWILLWAVLFRIEKPNWAIAITVTVISLGLGCASYGETN--FSMVGLLILIGASASGGLRWALIQRLMALEEMFEDPLIALYHIAPWSFITMLIMAV------SIEGTHIFAKENLAQFQSQATLEALVLTFIGGIMAFVLIVAEVK 300
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BLAST of mRNA_M-pyrifera_M_contig13893.6097.1 vs. uniprot
Match: A0A7S2ANC6_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2ANC6_9STRA)

HSP 1 Score: 173 bits (439), Expect = 3.220e-48
Identity = 106/254 (41.73%), Postives = 151/254 (59.45%), Query Frame = 1 
Query:  133 VRPIEIAAWVSMWYGVSVSMVMANRWLFHEWQGVGFPFPVLTTMIHMWLKFFVSRGIFWSRGNKPPH-----LDMSVNLRTIIPIGIATAGDILLSNLSFMYVDVTFYTIVKSGSLMWILLWAVAFKFEVMTPGMLYVVGVICLGLFLASWDENDKQFSLPGLLMILGASCFSGLRWALVQLLQQVEPGCIDPLLVIFYISPWSAISMTPMALLDILDEDLTGAHLTPASIGQVAGLILATGMFSFMLIFAEVK 879
            V+  EIAA+  +W+G SVS  + N+WLF  W   G P+P++ T +HM LK  +S+ IF      P H     L M +  + IIPI + TAGDI LSNLS   V VTFYTI+K+GSL+W+LLWAV F+ E  +  +  +  +I  GLFL+++   D  FS  GL++ILGASC SG+RW LVQ+L   +      ++V+++I+PW+A  M   AL     + L+    +   I     L L  G  +F+L+ AEVK
Sbjct:   21 VQSSEIAAFALLWFGTSVSFTIFNKWLFSYWHHDGLPYPLMATSLHMLLKAILSQ-IFVRCRCSPFHQTLDPLPMPLLFKVIIPIALCTAGDIALSNLSVQLVTVTFYTIIKAGSLLWVLLWAVIFRLEKPSLRLFGICFLIAGGLFLSTF--GDTAFSRIGLVLILGASCASGIRWGLVQVLMGHDNEQFTSMVVVYHIAPWAATFMFLTALGMEAPKMLSDTSFSNEEILLTILLTLVGGFAAFLLVLAEVK 271
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BLAST of mRNA_M-pyrifera_M_contig13893.6097.1 vs. uniprot
Match: A0A2R5GEA1_9STRA (Solute carrier family 35 member C2 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GEA1_9STRA)

HSP 1 Score: 169 bits (427), Expect = 3.450e-46
Identity = 97/249 (38.96%), Postives = 152/249 (61.04%), Query Frame = 1 
Query:  145 EIAAWVSMWYGVSVSMVMANRWLFHEWQGVGFPFPVLTTMIHMWLKFFVSRGIFWSRGNKPPHLDMSVNLRTIIPIGIATAGDILLSNLSFMYVDVTFYTIVKSGSLMWILLWAVAFKFEVMTPGMLYVVGVICLGLFLASWDENDKQFSLPGLLMILGASCFSGLRWALVQLLQQVEPGCIDPLLVIFYISPWSAISMTPMAL-LD---ILDEDLTGAHLTPASIGQVAGLILATGMFSFMLIFAEVK 879
            EIA W ++W+G SVSMV+ N+WL H W+G GF FP+L +M+HM +K+F+S  +        P +   V   + +P+G ATA D+  SN S++YV VTFYTIVKS SL++ LL++V +K +  +  +   V VI +G+ LAS    D +FS  G L+++G+S   G RW+L Q+L +     +D +L I+ ISP SA+S+ P++L +D           A L P ++  + G    +G+F+F +I  E++
Sbjct:   14 EIAYWSALWFGFSVSMVVYNKWLLHSWEG-GFNFPLLISMLHMGIKYFLSLAMVRCNSFAIPDIPRRVWWLSAVPVGCATALDVAASNASYLYVSVTFYTIVKSSSLVFTLLFSVLYKLQPCSLSLFCAVSVIVVGVVLASM--GDTEFSTIGFLLVIGSSAVGGFRWSLTQVLMKQIRCNLDAILTIYLISPASALSLIPLSLWVDGERFFQSKFIDASLLPYTVLNIVG----SGLFAFSMILVELE 255
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BLAST of mRNA_M-pyrifera_M_contig13893.6097.1 vs. uniprot
Match: A0A835ZEZ4_9STRA (Triose-phosphate transporter family-domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEZ4_9STRA)

HSP 1 Score: 163 bits (412), Expect = 3.300e-45
Identity = 92/217 (42.40%), Postives = 128/217 (58.99%), Query Frame = 1 
Query:  259 TMIHMWLKFFVSRGIFWS-----------RGNKPPHLDMSVNLRTIIPIGIATAGDILLSNLSFMYVDVTFYTIVKSGSLMWILLWAVAFKFEVMTPGMLYVVGVICLGLFLASWDENDKQFSLPGLLMILGASCFSGLRWALVQLLQQVEPGCIDPLLVIFYISPWSAISMTPMALLDILDEDLTGAHLTPASIGQVAGLILATGMFSFMLIFAEV 876
            T  HM +KF +SR  F +           R   P  L+  +  RT  PIG+ TA D+L+SN S M++ VTFYTI K+G+LMW LLWAV  + E        ++ VI  GL +ASW E D  FSLPGLL+++GA C  GLRWAL QLLQQ +P C DPL+V+++++  S   M P  L+D +    +    +PA + Q AG++ A G  +F L+  E+
Sbjct:    2 TACHMAVKFALSRAAFAAXXXXXXXGARLRRRAPEPLERRLYWRTAAPIGLLTAADVLMSNASLMFITVTFYTIAKTGTLMWTLLWAVVLRLEPARWVTALIISVITAGLAMASWGEID--FSLPGLLLVMGAGCAGGLRWALTQLLQQADPACKDPLVVVYHVAGASLAGMLPFVLIDAIPWAQSKFCDSPALLLQTAGIVAAGGCVAFALVATEI 216
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BLAST of mRNA_M-pyrifera_M_contig13893.6097.1 vs. uniprot
Match: A0A7S2WCK0_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2WCK0_9STRA)

HSP 1 Score: 161 bits (408), Expect = 6.950e-43
Identity = 96/256 (37.50%), Postives = 158/256 (61.72%), Query Frame = 1 
Query:  133 VRPIEIAAWVSMWYGVSVSMVMANRWLFHEWQGVGFPFPVLTTMIHMWLKFFVSRGIFWSRGNKP--PHLDMSVNLRTIIPIGIATAGDILLSNLSFMYVDVTFYTIVKSGSLMWILLWAVAFKFEVMTPGMLYVVGVICLGLFLASWDENDKQFSLPGLLMILGASCFSGLRWALVQLLQQVEPGCIDPLLVIFYISPWSAISMTPMAL-LD----ILDEDLTGAHLTPASIGQVAGLILATGMFSFMLIFAEVK 879
            V  ++I+ W  +W+  SVS+V+ N+WL + W+G GF FP+L +M HM LK+ +S        +K   P +  S+   + +P+GIATA D+  SN S+MY+ VTFYTIVKS SL+++L++++ +K + M  G++  V V+ LG+ LAS+   D  F+  G L++LG S   G RWAL Q+L +     ++ +L I++ISP SA+++ P++L L+    I  + +T  HL   SI  + G     G+F+F ++  E++
Sbjct:   63 VSVLDISIWAGLWFAFSVSLVVYNKWLLYSWEG-GFDFPLLISMFHMMLKYALSSLFVRCARSKEELPTIPRSIWWLSAVPVGIATALDVAGSNASYMYITVTFYTIVKSSSLIFVLVFSIMYKLQPMETGLIVSVFVVGLGVMLASY--GDTTFNGIGFLLVLGTSFVGGFRWALTQVLMKQIKCNLNAILTIYFISPASALTLIPLSLWLEGPRFITSKFVTQPHLLVLSILNIIG----AGIFAFAMLLVELE 311
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BLAST of mRNA_M-pyrifera_M_contig13893.6097.1 vs. uniprot
Match: A0A8K1CFW6_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CFW6_PYTOL)

HSP 1 Score: 152 bits (384), Expect = 1.980e-39
Identity = 91/247 (36.84%), Postives = 140/247 (56.68%), Query Frame = 1 
Query:  142 IEIAAWVSMWYGVSVSMVMANRWLFHEWQGVGFPFPVLTTMIHMWLKFFVSRGIFWSRGNKPPHLDMSVNLRTIIPIGIATAGDILLSNLSFMYVDVTFYTIVKSGSLMWILLWAVAFKFEVMTPGMLYVVGVICLGLFLASWDENDKQFSLPGLLMILGASCFSGLRWALVQ-LLQQVEPGCIDPLLVIFYISPWSAISMTPMALLDILDEDLTGAHLTPASIG-QVAGLILATGMFSFMLIFAEV 876
            ++++ ++ +WYG+S+ M + N+W    W   G+PF    T I+M+ K  +SR +    G K   L  ++  R  +PIGI T+ DI+LSNLSF Y+ VTFYTIVKSG  +W LL+++    +  +  +  V+ +I  G+ LAS+     QF L G L++L AS    LRW L Q LL++++      L V++YISP SA+ + P+AL     E L    L  + +  Q    I  +G  +F LIF E+
Sbjct:   71 VDVSVFIVLWYGISIGMTLFNKWFLRVWADGGYPFATTMTCINMFTKCLLSRVVNRCSGTKMTELPRAIYWRLAVPIGICTSLDIMLSNLSFFYITVTFYTIVKSGGNVWNLLFSICLGHQRPSYALFTVILLISSGIALASYGST--QFVLHGFLLVLSASIIGTLRWVLTQSLLKEMDESSNRILGVVYYISPASAVGLLPIALFSEGREILQSKFLLDSQLLIQSMIFIFVSGCLAFALIFVEI 315
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BLAST of mRNA_M-pyrifera_M_contig13893.6097.1 vs. uniprot
Match: A0A3R7IF39_9STRA (TPT domain-containing protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7IF39_9STRA)

HSP 1 Score: 145 bits (365), Expect = 2.080e-36
Identity = 95/260 (36.54%), Postives = 145/260 (55.77%), Query Frame = 1 
Query:  142 IEIAAWVSMWYGVSVSMVMANRWLFHEWQGVGFPFPVLTTMIHMWLKFFVSR-------GIFWSRGNKPPHLDM--SVNLRTIIPIGIATAGDILLSNLSFMYVDVTFYTIVKSGSLMWILLWAVAFKFEVMTPGMLYVVGVICLGLFLASWDENDKQFSLPGLLMILGASCFSGLRWALVQ-LLQQVEPGCIDP----LLVIFYISPWSAISMTPMALLDILDEDLTGAHLTPASIGQVAGL-ILATGMFSFMLIFAEV 876
            ++++ +V +WY VS+ M + N+W    W G G+PF    T I+M++K  +SR       G   S G     L +  SV  +  +PIG+ TA DI+LSNLS  Y+ VTFYTIVKSG  +W LL+++    +  +  +  V+ +I  G+ LAS+     QF L G L++L AS    LRW L Q LLQ +E   + P    L V++Y+SP SAI + P+AL     +  T   L  + +  ++ + I  +G  +F+LIF E+
Sbjct:   80 LDVSVYVVLWYAVSIGMTLFNKWFLRVWAGGGYPFATTMTCINMFVKCLLSRVIDRCSSGSCSSNGGGGTMLALPSSVYWKLAVPIGLCTALDIMLSNLSLFYITVTFYTIVKSGGNVWNLLFSICLGHQRPSWPLFTVIVLISSGIGLASY--GSAQFVLYGFLLVLSASVIGTLRWVLTQSLLQTMEDSSLSPRNKVLAVVYYVSPASAIGLLPIALFSEASDYATSRFLLDSQLLLMSLVFIFISGCLAFVLIFIEI 337
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BLAST of mRNA_M-pyrifera_M_contig13893.6097.1 vs. uniprot
Match: A0A2D4CJE1_PYTIN (TPT domain-containing protein (Fragment) n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CJE1_PYTIN)

HSP 1 Score: 140 bits (353), Expect = 6.220e-36
Identity = 87/248 (35.08%), Postives = 136/248 (54.84%), Query Frame = 1 
Query:  142 IEIAAWVSMWYGVSVSMVMANRWLFHEWQGVGFPFPVLTTMIHMWLKFFVSRGIFWSRGNKPPHLDMSVNLRTIIPIGIATAGDILLSNLSFMYVDVTFYTIVKSGSLMWILLWAVAFKFEVMTPGMLYVVGVICLGLFLASWDENDKQFSLPGLLMILGASCFSGLRWALVQ-LLQQVEPGCIDPLLVIFYISPWSAISMTPMALLDILDEDLTGAHLTPASI-GQVAGLILATGMFSFMLIFAEVK 879
            ++++ ++ +WY +S+ M + N+W    W   GFPF    T I+M+ K  +SR +     +K   L   V  R  +PIG+ T+ DI+LSNLSF Y+ VTFYTIVKSG  +W LL+++    +  +  +  V+ +I  G+ LAS+     QF L G +++L AS    LRW L Q LL+ ++      L V++YISP SA+ + P+AL       L    +  +S+  +  G I      +F LIF E+ 
Sbjct:   70 LDVSVYIVLWYAISIGMTLFNKWFLRVWADGGFPFSTTMTCINMFTKCLLSRLMNRCATSKMTALPARVYWRLAVPIGLCTSLDIMLSNLSFFYITVTFYTIVKSGGNVWNLLFSILLGHQRPSYALFTVILLISSGISLASYGST--QFVLHGFVLVLCASIIGTLRWVLTQSLLKAMDESSNRILAVVYYISPASALGLLPIALATEGPAMLQSKFVRDSSLLFESMGFIFLNSCLAFALIFVEIS 315
[Close]
BLAST of mRNA_M-pyrifera_M_contig13893.6097.1 vs. uniprot
Match: K3X2R3_GLOUD (TPT domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X2R3_GLOUD)

HSP 1 Score: 142 bits (358), Expect = 2.660e-35
Identity = 87/249 (34.94%), Postives = 140/249 (56.22%), Query Frame = 1 
Query:  142 IEIAAWVSMWYGVSVSMVMANRWLFHEWQGVGFPFPVLTTMIHMWLKFFVSRGI--FWSRGNKPPHLDMSVNLRTIIPIGIATAGDILLSNLSFMYVDVTFYTIVKSGSLMWILLWAVAFKFEVMTPGMLYVVGVICLGLFLASWDENDKQFSLPGLLMILGASCFSGLRWALVQ-LLQQVEPGCIDPLLVIFYISPWSAISMTPMALLDILDEDLTGAHL-TPASIGQVAGLILATGMFSFMLIFAEV 876
            ++++ ++ +WY +S+ M + N+W    W   G+PF    T I+M++K  +SR +    S  +    L      R  +PIG+ TA DI+LSNLSF Y+ VTFYTIVKSG  +W LL+++    +  +  ++ V+ +I  G+ LAS+     QF + G L++L AS    LRW L Q LL++++      L V++YISP SA+ + P+A++      L    L  P  +    G I  +G  +F+LIF E+
Sbjct:  101 LDVSVYIVLWYAISIGMTLFNKWFLRVWADGGYPFATTMTCINMFIKCLLSRIVNACSSSASIAGALTAKTYWRLAVPIGLCTALDIMLSNLSFFYITVTFYTIVKSGGNVWNLLFSICLGHQRASYSLVVVILLISSGIGLASFGST--QFVIHGFLLVLAASIIGTLRWVLTQSLLKEMDESSNRILAVVYYISPASAVGLLPIAIVTEGATLLQSKFLHDPRLLVLSMGFIFVSGCLAFVLIFVEI 347
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig13893.6097.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JST1_9PHAE5.670e-13670.65TPT domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A7S2FM58_9STRA3.290e-4938.13Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S2ANC6_9STRA3.220e-4841.73Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A2R5GEA1_9STRA3.450e-4638.96Solute carrier family 35 member C2 n=1 Tax=Hondaea... [more]
A0A835ZEZ4_9STRA3.300e-4542.40Triose-phosphate transporter family-domain-contain... [more]
A0A7S2WCK0_9STRA6.950e-4337.50Hypothetical protein n=1 Tax=labyrinthulid quahog ... [more]
A0A8K1CFW6_PYTOL1.980e-3936.84Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A3R7IF39_9STRA2.080e-3636.54TPT domain-containing protein n=3 Tax=Phytophthora... [more]
A0A2D4CJE1_PYTIN6.220e-3635.08TPT domain-containing protein (Fragment) n=1 Tax=P... [more]
K3X2R3_GLOUD2.660e-3534.94TPT domain-containing protein n=1 Tax=Globisporang... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig13893contigM-pyrifera_M_contig13893:133..5382 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score401.4
Seed ortholog evalue3.7e-109
Seed eggNOG ortholog2880.D7FRB1
KEGG koko:K15280
KEGG TC2.A.7
Hectar predicted targeting categorysignal peptide
EggNOG free text desc.UDP-glucose transmembrane transport
EggNOG OGsCOG0697@1,KOG1443@2759
COG Functional cat.EG
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko02000
Exons5
Model size879
Cds size879
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig13893.6097.1prot_M-pyrifera_M_contig13893.6097.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig13893 133..5382 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815828.4241302-CDS-M-pyrifera_M_contig13893:132..3671622815828.4241302-CDS-M-pyrifera_M_contig13893:132..367Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig13893 133..367 -
1692277592.7979288-CDS-M-pyrifera_M_contig13893:132..3671692277592.7979288-CDS-M-pyrifera_M_contig13893:132..367Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig13893 133..367 -
1622815828.4396193-CDS-M-pyrifera_M_contig13893:1995..21691622815828.4396193-CDS-M-pyrifera_M_contig13893:1995..2169Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig13893 1996..2169 -
1692277592.8131545-CDS-M-pyrifera_M_contig13893:1995..21691692277592.8131545-CDS-M-pyrifera_M_contig13893:1995..2169Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig13893 1996..2169 -
1622815828.453461-CDS-M-pyrifera_M_contig13893:2600..27551622815828.453461-CDS-M-pyrifera_M_contig13893:2600..2755Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig13893 2601..2755 -
1692277592.8216002-CDS-M-pyrifera_M_contig13893:2600..27551692277592.8216002-CDS-M-pyrifera_M_contig13893:2600..2755Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig13893 2601..2755 -
1622815828.464176-CDS-M-pyrifera_M_contig13893:4136..43041622815828.464176-CDS-M-pyrifera_M_contig13893:4136..4304Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig13893 4137..4304 -
1692277592.8345494-CDS-M-pyrifera_M_contig13893:4136..43041692277592.8345494-CDS-M-pyrifera_M_contig13893:4136..4304Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig13893 4137..4304 -
1622815828.4760478-CDS-M-pyrifera_M_contig13893:5235..53821622815828.4760478-CDS-M-pyrifera_M_contig13893:5235..5382Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig13893 5236..5382 -
1692277592.8454902-CDS-M-pyrifera_M_contig13893:5235..53821692277592.8454902-CDS-M-pyrifera_M_contig13893:5235..5382Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig13893 5236..5382 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig13893.6097.1

>prot_M-pyrifera_M_contig13893.6097.1 ID=prot_M-pyrifera_M_contig13893.6097.1|Name=mRNA_M-pyrifera_M_contig13893.6097.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=293bp
MVSDKFVMGLYCLVTFTASGLLFGFRKLLLLDSANSRLSKAAEYVRPIEI
AAWVSMWYGVSVSMVMANRWLFHEWQGVGFPFPVLTTMIHMWLKFFVSRG
IFWSRGNKPPHLDMSVNLRTIIPIGIATAGDILLSNLSFMYVDVTFYTIV
KSGSLMWILLWAVAFKFEVMTPGMLYVVGVICLGLFLASWDENDKQFSLP
GLLMILGASCFSGLRWALVQLLQQVEPGCIDPLLVIFYISPWSAISMTPM
ALLDILDEDLTGAHLTPASIGQVAGLILATGMFSFMLIFAEVK
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mRNA from alignment at M-pyrifera_M_contig13893:133..5382-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig13893.6097.1 ID=mRNA_M-pyrifera_M_contig13893.6097.1|Name=mRNA_M-pyrifera_M_contig13893.6097.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=5250bp|location=Sequence derived from alignment at M-pyrifera_M_contig13893:133..5382- (Macrocystis pyrifera P11B4 male)
ATGGTCTCCGACAAATTTGTGATGGGCTTATACTGTCTGGTGACGTTCAC
AGCGTCTGGGCTGCTGTTCGGGTTTAGGAAGCTTCTGCTGCTGGACTCTG
CGAACAGTCGACTGAGCAAGGCAGCGGAATACGTCCGACCTATTGAGGTG
TGATATGATATGATGCCTACCCCAGGGTATATATACTTTGACAATACGTG
GCACAGCAGAGCTCTCAAACTAAAGGCAGCAGCCTTTCTCTAACAACCTG
TTTGCTGCTGCCCTCTCCTGTACGTTTGCTGGTTGTCGTGGTGTCTGCGC
GGACGATCTGCCTCCTCCGCGCACCGTTTGCTGTTCTTGGAGCTACAGCG
ATATGTTGAAATCAGTACAGCAGTACGGCGTTCACGACGTGCCTGGCCCG
AAGGAAGCACACCTCTCTCAAGATGAATCCACATATGACACCCTCGGGTA
CTAAGAACACAAGTATATGACACTCTCGAGCACCACAACTCACAATCTCA
CAAGACAACACGATGCAGTCATCGTGTGGGAGATTTATGTATGTAGAGGT
ATCAATAGCGGCAGTTCCTACAAAACAACAGCATTAGTGTAGTACTCGCA
CAATTGTCTCGGAGTATACAGCAGTTAGTCGACACGACGAACAGGGATTT
TGGTATATCACTACATCCGTAAATATAAGGAAATTTTGTTAATTAATTTA
AATACTCAAAATATCCTTACATTTACGGCCAAAATGGTACGTACCTCTGG
TACAGGGGTACCCGGCAGGTACAGCCTACCAGGGTATACTGATACATCAG
TCAGTAACTTGCAGAGTATCATCCGCAACCCGTGACACACAACTGCTTTT
GTCGACGTACCGGTATGCCTATGATGCAATATAACACGAGGTACCAGGTA
TGTATGAATTTTACTTGTGCTGAGTGAAATACTTTTGACCTGACAGAATC
GACTACGATACTACTCGACGTGCCTTCCTTCGTATTCCCCCCCCGCACTC
CGTTCATTCCTACTCCTAAAATCCTGCTGCTGCTGCCGCCGCTGCTACCG
CTGGATCGTAATGTTTTTCTTCGTCCAGATCGCAGCGTGGGTGTCCATGT
GGTACGGCGTGAGCGTCTCGATGGTGATGGCAAATCGCTGGCTCTTTCAC
GAGTGGCAGGGCGTTGGGTTCCCGTTTCCCGTGCTCACCACCATGATTCA
TATGTGGCTCAAGTTTTTCGTGTCAAGGGGCATTTTCTGGTCGAGGGTGA
GCGTAACGCATAATATATACTTGTACGAATAACGCTGTGGACGCTTCATG
TAATACTTCGAAGTATGATTCAGCAGCATTATACGCGTACATAGCTTCAG
TCACAACGGCATTCCACCCAACTGGTTAGGTAAATAGTTGGTGTATTAAT
ATTACCTGGTAGTACATATAACGCGGTTTTTGTTGCGATAGATACCAGGG
ATGGTAGCTACCGGCACGAGGCAATCACCGGTAGTGAATCCCGTATGAAG
TTTCGTCTTTTTTCGGCCCTTTTTTCTGCCGTAATTTGTTTGAAATTTTC
CCGGGTGAAAAAAAATGCCTCCACATACACTGGAAACCCCTGGATTTTCT
TTTGCGTTTCTTGATGGCTCTAGCTCCCTAGCTAGACTACTAGTAGCGCG
CGCAGGTGACACACAACACAGGCTCTTCCGTGTTTGGTTCGGATGTTAAC
GATCATCCTTGACCGAGGATAATAAGGATACATACCCTGAATTGAAAACT
TTGCGGTAGTTCCGGTATAGGTGTCTGATTTTCAGCTAGAATCGATGACA
ACCGGTACGTCACAGCTCTAAATTATGGTACTCGTATCGACCAGCGCTGA
TAAATACACGTTCTCTTCGGTATGGTTTCAGGTAACCTTACCGTATGTAT
ATTTGCAACATTTTGGTGTTTAGCGTGTACGTAGAACCGGCAGCGTACGG
ATTAGTTCGTATCCTGCCGGCACTTACCGCAGCGGCGGCAGCAACAACAG
CAGCAGAACAGCAGCAGCAGCAGCGGTACGACACACGAGGTGTCGAAGTC
TGTCCAGTGTCCTTATGCTCACTATCACTACGTCACTCTGTCCCTGAATG
TAAGGAGCGTTTGCGTACTAATATTCAATCAAAACTGTCCCTATATTTAG
GGACAGTGGTAATATTTACCTCTATACCCAACCTTCCAAACCTCAATAAT
CCTGATGTATAACGTTAAGGCGAACGTCGTTTTATGCGGCGGTATGATTC
CTGGGTAAACGACATTCTCGCGGTTCTCGTCCTCGGTACGTAGTGTTTAT
GACTTTGCCCAGCTCCGATACAATGATGTTCTGTGTAGTCCGGACTTCAC
ACTGCCTCCTCATTAGATGTTCACTCCGAGAAATTTCCCAGAAATTTCCC
AGGCGGTCAGGGTTGGGTTTTGGGTTAGTGTTTGCAGTGAAGTACCGGTA
TGAACACTCTAATAATAGTCGAAGCTGGATCAAGGTCTTTGCATCCTCGT
AGAACACCTCTCTTTGTCCTTGCATATACAGTAAATCTCCTCCGCTCACC
ACCGACGGTGCAATTTCGTTTGTCCCTGATTGACTCACCGTGAGTAACCA
ACCAAACCTCACCAACCAATCACGCAGGGCAACAAGCCACCACACCTGGA
CATGTCGGTGAACCTTCGGACCATCATCCCCATCGGCATCGCCACGGCGG
GAGACATCCTGCTGTCGAATCTCTCGTTCATGTACGTGGACGTCACGTTC
TACACTATCGTCAAGTCGGGCTCGCTCATGTGGTGAGTAAGGCCTGCCCG
CACCCTACACCAGGCACCAGAGAACACAGAACACCTCCTTTTATATGGAT
CCCACTCAGCAAGCAGCAGTCTATCGTTACCTGGTACGGTATTGTTCTTC
GGACATCGTTCTATGTGGGACACGGTGACCGAGACTCCATCCACCTCGAC
CGCCGATATTTACTAGCCGCGGCGCGAAATGTACGTAATGTAGGAGCACG
TACATACTGCTTTCGTGTCGTCGATTTATTGTAGTACTGACCATGGGCTG
CTTGGATACGACGCACTGACGGTTTGGCTGTTGACATGATCTACTGCTTT
ACTGCGGTGTCGTACTTGTAGTAGTGTTACCGGTGTGTCTTGTGCTGGTT
GCGACGCGTTGTACCTCACCCACCACCCGTCCTTGACCCTACGACTCTCC
CGCCATTCTATAGGATTCTCTTGTGGGCTGTGGCCTTCAAGTTCGAAGTG
ATGACGCCCGGAATGCTGTATGTGGTGGGCGTCATTTGCTTAGGGCTGTT
TTTGGCGAGCTGGGATGAAAATGACAAGCAATTTTCTCTGCCGGGGTTGT
TGATGATTCTGGGCGCTTCTTGCTTTTCAGGACTCAGGTTAGTCTGCTGC
CGCCCCTTATTCTCCCCTTCCTTCCGCCCGAGAACGCCGCTCATGCGCGC
TACGACGTTGTTTCGTGCTTAAGGACATAGTCTGCAGCAAAATCGGCAAC
GCATTCATAGTATCCACTCTTGATAATATGAAGGGGGAACATGTATCATT
CATTGGTGGTATTCTTCATGTTTTGCATATATAGTGGCAGTTTGGAGTCT
GGACTTGTCGAAGAGCCGGCTATGGGTCAAGCTTTTGTTTGTCTCTTGAG
TGTCTGGTTCTGTTCCATACCCCTCCGTTGCGGGACCTCGCCGGCTTATA
GTTCACTCCTACGAACCAGGTATACGAAACTATGTTTTTTTTCATCGTTT
TCTTTGTTCAATTTGTCTTTTCCGCAGCAGCTATTTGTTTCCAGTATAAT
AGTGGCCTATGAAACACGCCTTAGGAAAAAGGGCACACCTCCCGACCTAC
CCAAACCTGTTGAGCGCATCCGTCCGAGCTGAGAAGAAACCGTACATTCA
CCCCAATTCACCCCAGTGTTTTTTTTTCAACTAGTACGGGGGTCCATAGT
TAATAGGACCCACGGTACACACAAAACCTATATATTTCCCTATTTTTACT
AACAATATTTGGTCCTATATACTATGCCTCCCCAGTAGATAACTAAAAGG
CACGCCTTGTTGTGATTGCATCCCGTAAAGCTGTACCTGCATTTTGTTGA
TTCTGCTGTCCTCTCCCGTAGAGCTACGTTGCGTCGTTCGTGCTTCACGG
GACGCGGGCTCCGTTAGAGGCTTGCATCGGTCGGTATGCGAATGGGTTGG
CATTTCCGCCGAAGTTCAATTTTAACCAACATTGGTGGCGTGAGAACTCG
TACCTTTTCAAGTTGACCATTAGATGGCGGAGTGTCACTTATAGCGTTCG
TCTGCGAATCGTTTTTCGGGTTGAAAAATGCGCCGATTTTTTCCGTAAGC
CGTGTTTCCTACCGCTAGAATATGTATGCCAGAAATAGTGTGTTCAAACA
AGCAGTGCTCGAGTAGTCAACGAAAACACAAGAACAGAAATCCGGCGAAC
GGGTGTCGTAATTTTTTGCGTACTACGCACCTGATAGTCGGTCTGAGCTT
GTCGTTCAAGAGCCGGCCTTTCTACGGTATGTCTTCAAGCATGTACATCA
GTTACCCTTTCCAACTGCACGCACTTTTGGGGACAAACTACTTGGAATTA
TAGTTGAAACATGCTTGCACTACTGCTGTAGTAAAAAGGTGAAGCTCTCG
TTTGCGGCTCCGAGTGCCCGTTTCTATGACGCCCCAATCCGTACACGCAC
TTTGAACAACGCGCAGCAGTATACATGCCAGGTGTGCGCCACGCCGCTAT
CAGAACGTCGTTGTGCGGGCGGGGTTACTACTTTTCTATCGTCACAACGA
CACTCTTGACTCTTTACTGAAGACATCGTAGACAACGTAGGTATGTAGTA
GCTCGTCTTCCGCACGCACAGCTGAGCACAGCATGGTGCCACGATGTGAA
CCTATGATCGCTCTCTCTCTGCTCTCTCTCTCGCGCGCGCGCCTTTTCCA
CTATTAATAGCGCCTGGCCAATTTCGTTTTTCGTTTTTGCCGGTTTCAAA
TCTTCTATGTACCAGATGGGCGCTGGTGCAGCTCCTTCAGCAAGTGGAGC
CGGGGTGTATCGACCCCCTGCTGGTGATTTTCTACATCTCCCCGTGGAGC
GCGATATCGATGACGCCCATGGCCCTGCTGGACATACTAGACGAAGACCT
CACAGGCGCTCACCTGACTCCCGCCTCAATCGGTCAAGTGGCGGGGTTGA
TTTTGGCGACCGGAATGTTTTCCTTCATGCTCATTTTCGCCGAGGTGAAA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig13893:133..5382-

>mRNA_M-pyrifera_M_contig13893.6097.1 ID=mRNA_M-pyrifera_M_contig13893.6097.1|Name=mRNA_M-pyrifera_M_contig13893.6097.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1758bp|location=Sequence derived from alignment at M-pyrifera_M_contig13893:133..5382- (Macrocystis pyrifera P11B4 male)
ATGGTCTCCGACAAATTTGTGATGGGCTTATACTGTCTGGTGACGTTCAC
AGCGTCTGGGCTGCTGTTCGGGTTTAGGAAGCTTCTGCTGCTGGACTCTG
CGAACAGTCGACTGAGCAAGGCAGCGGAATACGTCCGACCTATTGAGATG
GTCTCCGACAAATTTGTGATGGGCTTATACTGTCTGGTGACGTTCACAGC
GTCTGGGCTGCTGTTCGGGTTTAGGAAGCTTCTGCTGCTGGACTCTGCGA
ACAGTCGACTGAGCAAGGCAGCGGAATACGTCCGACCTATTGAGATCGCA
GCGTGGGTGTCCATGTGGTACGGCGTGAGCGTCTCGATGGTGATGGCAAA
TCGCTGGCTCTTTCACGAGTGGCAGGGCGTTGGGTTCCCGTTTCCCGTGC
TCACCACCATGATTCATATGTGGCTCAAGTTTTTCGTGTCAAGGGGCATT
TTCTGGTCGAGGATCGCAGCGTGGGTGTCCATGTGGTACGGCGTGAGCGT
CTCGATGGTGATGGCAAATCGCTGGCTCTTTCACGAGTGGCAGGGCGTTG
GGTTCCCGTTTCCCGTGCTCACCACCATGATTCATATGTGGCTCAAGTTT
TTCGTGTCAAGGGGCATTTTCTGGTCGAGGGGCAACAAGCCACCACACCT
GGACATGTCGGTGAACCTTCGGACCATCATCCCCATCGGCATCGCCACGG
CGGGAGACATCCTGCTGTCGAATCTCTCGTTCATGTACGTGGACGTCACG
TTCTACACTATCGTCAAGTCGGGCTCGCTCATGTGGGCAACAAGCCACCA
CACCTGGACATGTCGGTGAACCTTCGGACCATCATCCCCATCGGCATCGC
CACGGCGGGAGACATCCTGCTGTCGAATCTCTCGTTCATGTACGTGGACG
TCACGTTCTACACTATCGTCAAGTCGGGCTCGCTCATGTGGATTCTCTTG
TGGGCTGTGGCCTTCAAGTTCGAAGTGATGACGCCCGGAATGCTGTATGT
GGTGGGCGTCATTTGCTTAGGGCTGTTTTTGGCGAGCTGGGATGAAAATG
ACAAGCAATTTTCTCTGCCGGGGTTGTTGATGATTCTGGGCGCTTCTTGC
TTTTCAGGACTCAGGATTCTCTTGTGGGCTGTGGCCTTCAAGTTCGAAGT
GATGACGCCCGGAATGCTGTATGTGGTGGGCGTCATTTGCTTAGGGCTGT
TTTTGGCGAGCTGGGATGAAAATGACAAGCAATTTTCTCTGCCGGGGTTG
TTGATGATTCTGGGCGCTTCTTGCTTTTCAGGACTCAGATGGGCGCTGGT
GCAGCTCCTTCAGCAAGTGGAGCCGGGGTGTATCGACCCCCTGCTGGTGA
TTTTCTACATCTCCCCGTGGAGCGCGATATCGATGACGCCCATGGCCCTG
CTGGACATACTAGACGAAGACCTCACAGGCGCTCACCTGACTCCCGCCTC
AATCGGTCAAGTGGCGGGGTTGATTTTGGCGACCGGAATGTTTTCCTTCA
TGCTCATTTTCGCCGAGGTGAAAATGGGCGCTGGTGCAGCTCCTTCAGCA
AGTGGAGCCGGGGTGTATCGACCCCCTGCTGGTGATTTTCTACATCTCCC
CGTGGAGCGCGATATCGATGACGCCCATGGCCCTGCTGGACATACTAGAC
GAAGACCTCACAGGCGCTCACCTGACTCCCGCCTCAATCGGTCAAGTGGC
GGGGTTGATTTTGGCGACCGGAATGTTTTCCTTCATGCTCATTTTCGCCG
AGGTGAAA
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