mRNA_M-pyrifera_M_contig13863.6088.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig13863.6088.1 vs. uniprot
Match: A0A6H5JL23_9PHAE (1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamideisomerase n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JL23_9PHAE) HSP 1 Score: 134 bits (338), Expect = 1.470e-36 Identity = 67/91 (73.63%), Postives = 74/91 (81.32%), Query Frame = 1
Query: 1 SSMYKRDALPGGHVIMLGKGCQEAATAAIRLVEVGAFPGGFHVGGGVNASNAKAYLDAGASHVIVTSYVFKDGDIDWERLGDLRETVGKER 273
+ MY+RD L GGHVIMLG GC+EAA AAI+ AFPGG HVGGGVN SNA YLDAGASHVIVTSYVFKDG+IDWERL +LR VGK+R
Sbjct: 109 AKMYERDGLRGGHVIMLGGGCEEAALAAIK-----AFPGGLHVGGGVNPSNAMKYLDAGASHVIVTSYVFKDGEIDWERLEELRTVVGKDR 194
BLAST of mRNA_M-pyrifera_M_contig13863.6088.1 vs. uniprot
Match: A0A7S0W7T4_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0W7T4_9CRYP) HSP 1 Score: 122 bits (306), Expect = 5.450e-34 Identity = 60/91 (65.93%), Postives = 71/91 (78.02%), Query Frame = 1
Query: 1 SSMYKRDALPGGHVIMLGKGCQEAATAAIRLVEVGAFPGGFHVGGGVNASNAKAYLDAGASHVIVTSYVFKDGDIDWERLGDLRETVGKER 273
+ MYK D LPGGHVI LG G +EAA AA+R A+PGG H+GGGVN NAK +LDAGASHVIVTSYVFKDG +DW++L +L + VGKER
Sbjct: 45 AEMYKADNLPGGHVIALGPGNEEAALAALR-----AYPGGMHMGGGVNPGNAKKFLDAGASHVIVTSYVFKDGRLDWDKLEELLQAVGKER 130
BLAST of mRNA_M-pyrifera_M_contig13863.6088.1 vs. uniprot
Match: A0A7S1DU50_HEMAN (1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamideisomerase n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1DU50_HEMAN) HSP 1 Score: 119 bits (297), Expect = 4.740e-31 Identity = 57/91 (62.64%), Postives = 71/91 (78.02%), Query Frame = 1
Query: 1 SSMYKRDALPGGHVIMLGKGCQEAATAAIRLVEVGAFPGGFHVGGGVNASNAKAYLDAGASHVIVTSYVFKDGDIDWERLGDLRETVGKER 273
+ MYK D LPGGHVI LG G +EAA AA++ A+PGG H+GGGVN NA+ +LDAGASHVIVTSYVFKDG +DW++L ++ + VGKER
Sbjct: 56 ADMYKADKLPGGHVIALGPGNEEAALAALK-----AYPGGMHMGGGVNPGNAQKFLDAGASHVIVTSYVFKDGKLDWDKLEEVLKVVGKER 141
BLAST of mRNA_M-pyrifera_M_contig13863.6088.1 vs. uniprot
Match: A0A7S2GCA0_9STRA (1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamideisomerase n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GCA0_9STRA) HSP 1 Score: 117 bits (293), Expect = 2.760e-30 Identity = 56/89 (62.92%), Postives = 68/89 (76.40%), Query Frame = 1
Query: 7 MYKRDALPGGHVIMLGKGCQEAATAAIRLVEVGAFPGGFHVGGGVNASNAKAYLDAGASHVIVTSYVFKDGDIDWERLGDLRETVGKER 273
+Y RDALPGGHVIMLG G +EAA A+R ++PGGFHVGGG+ NA +LDAGASHVIVTSYVF+DGD+ W+ LG + VGK+R
Sbjct: 73 LYMRDALPGGHVIMLGLGNEEAAMEALR-----SYPGGFHVGGGITPDNASRFLDAGASHVIVTSYVFRDGDLCWDNLGKMVNAVGKDR 156
BLAST of mRNA_M-pyrifera_M_contig13863.6088.1 vs. uniprot
Match: A0A7S0BDC3_9RHOD (1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamideisomerase n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BDC3_9RHOD) HSP 1 Score: 115 bits (288), Expect = 1.380e-29 Identity = 56/91 (61.54%), Postives = 67/91 (73.63%), Query Frame = 1
Query: 1 SSMYKRDALPGGHVIMLGKGCQEAATAAIRLVEVGAFPGGFHVGGGVNASNAKAYLDAGASHVIVTSYVFKDGDIDWERLGDLRETVGKER 273
+ MYK D LPGGHVIMLG G +E A A+R AFPGG HVGGG+N NAK YLD GASHVIVTSYVF+DG++D +RL +L + K+R
Sbjct: 71 AKMYKEDDLPGGHVIMLGPGNEEVAKEALR-----AFPGGLHVGGGINPQNAKEYLDCGASHVIVTSYVFRDGNVDMDRLQELVSAISKDR 156
BLAST of mRNA_M-pyrifera_M_contig13863.6088.1 vs. uniprot
Match: A0A7X7DL37_9BACT (5-proFAR isomerase n=1 Tax=Fibrobacter sp. TaxID=35828 RepID=A0A7X7DL37_9BACT) HSP 1 Score: 114 bits (284), Expect = 3.170e-29 Identity = 55/91 (60.44%), Postives = 68/91 (74.73%), Query Frame = 1
Query: 1 SSMYKRDALPGGHVIMLGKGCQEAATAAIRLVEVGAFPGGFHVGGGVNASNAKAYLDAGASHVIVTSYVFKDGDIDWERLGDLRETVGKER 273
+ +YK+D + GGHVIMLGKG +EAA +A+ FPGG VGGG+N NAK+YLD GASHVIVTSYVF DG IDW R+ +L +T+GK R
Sbjct: 43 AGIYKKDNITGGHVIMLGKGNEEAARSALTT-----FPGGLQVGGGINTLNAKSYLDDGASHVIVTSYVFHDGYIDWTRIRELADTIGKNR 128
BLAST of mRNA_M-pyrifera_M_contig13863.6088.1 vs. uniprot
Match: A0A7X7I6C0_9BACT (5-proFAR isomerase n=1 Tax=Fibrobacter sp. TaxID=35828 RepID=A0A7X7I6C0_9BACT) HSP 1 Score: 113 bits (283), Expect = 4.090e-29 Identity = 55/91 (60.44%), Postives = 69/91 (75.82%), Query Frame = 1
Query: 1 SSMYKRDALPGGHVIMLGKGCQEAATAAIRLVEVGAFPGGFHVGGGVNASNAKAYLDAGASHVIVTSYVFKDGDIDWERLGDLRETVGKER 273
+ +YK++ L GGHVIMLGKG + AA A++ AFPGGFH+GGG+ NA YLDAGASHVIVTSYVFKDG + W+RL L ++VGKE+
Sbjct: 43 AGLYKKENLYGGHVIMLGKGNESAALDALK-----AFPGGFHIGGGITPDNAHLYLDAGASHVIVTSYVFKDGMVHWDRLEHLMKSVGKEK 128
BLAST of mRNA_M-pyrifera_M_contig13863.6088.1 vs. uniprot
Match: A0A3C1VG89_9BACT (5-proFAR isomerase n=1 Tax=Verrucomicrobia subdivision 3 bacterium TaxID=2052186 RepID=A0A3C1VG89_9BACT) HSP 1 Score: 113 bits (282), Expect = 5.520e-29 Identity = 54/91 (59.34%), Postives = 69/91 (75.82%), Query Frame = 1
Query: 1 SSMYKRDALPGGHVIMLGKGCQEAATAAIRLVEVGAFPGGFHVGGGVNASNAKAYLDAGASHVIVTSYVFKDGDIDWERLGDLRETVGKER 273
+ +YK D L GGHVIMLG G A AA+ AFPGG H+GGGVNASNA+ +L+AGASHVIVTS+VF++G +DW RLG+L + +GK+R
Sbjct: 40 AELYKSDRLTGGHVIMLGSGNDAEARAALA-----AFPGGLHIGGGVNASNARGWLEAGASHVIVTSWVFREGRVDWARLGELVKAIGKDR 125
BLAST of mRNA_M-pyrifera_M_contig13863.6088.1 vs. uniprot
Match: A0A835YTK8_9STRA (1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamideisomerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTK8_9STRA) HSP 1 Score: 113 bits (282), Expect = 7.360e-29 Identity = 54/90 (60.00%), Postives = 68/90 (75.56%), Query Frame = 1
Query: 1 SSMYKRDALPGGHVIMLGKGCQEAATAAIRLVEVGAFPGGFHVGGGVNASNAKAYLDAGASHVIVTSYVFKDGDIDWERLGDLRETVGKE 270
+++Y++D LPGGHVIMLG C+EAA AA+R A+P G HVGGG+ A+ A Y++AGASHVIVTSYVFK G I W+RL +L VGKE
Sbjct: 46 AALYRKDRLPGGHVIMLGPNCEEAAMAALR-----AYPQGLHVGGGITAATASKYIEAGASHVIVTSYVFKGGQIAWDRLDELVAAVGKE 130
BLAST of mRNA_M-pyrifera_M_contig13863.6088.1 vs. uniprot
Match: A0A2R5G2D0_9STRA (1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamideisomerase n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G2D0_9STRA) HSP 1 Score: 114 bits (284), Expect = 9.420e-29 Identity = 57/91 (62.64%), Postives = 69/91 (75.82%), Query Frame = 1
Query: 1 SSMYKRDALPGGHVIMLGKGCQEAATAAIRLVEVGAFPGGFHVGGGVNASNAKAYLDAGASHVIVTSYVFKDGDIDWERLGDLRETVGKER 273
+++Y+ D L GGHVIMLGKG +EAA A+ GAFP G HVGGGV NA+ YLDAGASHVIVTSYVF+DG ID+++L +L VGKER
Sbjct: 44 AALYQEDGLQGGHVIMLGKGNEEAALEAL-----GAFPDGMHVGGGVTPENAQKYLDAGASHVIVTSYVFRDGTIDFDKLHELESAVGKER 129 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig13863.6088.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig13863.6088.1 >prot_M-pyrifera_M_contig13863.6088.1 ID=prot_M-pyrifera_M_contig13863.6088.1|Name=mRNA_M-pyrifera_M_contig13863.6088.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=90bp MYKRDALPGGHVIMLGKGCQEAATAAIRLVEVGAFPGGFHVGGGVNASNAback to top mRNA from alignment at M-pyrifera_M_contig13863:6458..8371+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig13863.6088.1 ID=mRNA_M-pyrifera_M_contig13863.6088.1|Name=mRNA_M-pyrifera_M_contig13863.6088.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=1914bp|location=Sequence derived from alignment at M-pyrifera_M_contig13863:6458..8371+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig13863:6458..8371+ >mRNA_M-pyrifera_M_contig13863.6088.1 ID=mRNA_M-pyrifera_M_contig13863.6088.1|Name=mRNA_M-pyrifera_M_contig13863.6088.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=540bp|location=Sequence derived from alignment at M-pyrifera_M_contig13863:6458..8371+ (Macrocystis pyrifera P11B4 male)back to top |