mRNA_M-pyrifera_M_contig13787.6073.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig13787.6073.1 vs. uniprot
Match: D8LEQ8_ECTSI (EGF-like domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEQ8_ECTSI) HSP 1 Score: 124 bits (311), Expect = 1.060e-31 Identity = 53/58 (91.38%), Postives = 56/58 (96.55%), Query Frame = 1
Query: 1 GPGKRWKFSIAYDGLSMMVFGGHRLWHGFATDNSERNSWSSFEDYPKGGYLQDLWVYT 174
GPGKRWKFS+AYDGLSMMVFGGHRLWHGFATDNSE NSWSSF +YP+GGYLQDLWVYT
Sbjct: 283 GPGKRWKFSVAYDGLSMMVFGGHRLWHGFATDNSEANSWSSFAEYPEGGYLQDLWVYT 340
BLAST of mRNA_M-pyrifera_M_contig13787.6073.1 vs. uniprot
Match: A0A1V9ZJ82_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZJ82_9STRA) HSP 1 Score: 92.8 bits (229), Expect = 1.030e-21 Identity = 39/58 (67.24%), Postives = 45/58 (77.59%), Query Frame = 1
Query: 1 GPGKRWKFSIAYDGLSMMVFGGHRLWHGFATDNSERNSWSSFEDYPKGGYLQDLWVYT 174
GPGKRWKFS + DG +M VFGG+RLWHGFA NS+ N WS + YPKGGYL DLW +T
Sbjct: 163 GPGKRWKFSSSGDGAAMYVFGGYRLWHGFAPQNSQANLWSDYSAYPKGGYLADLWRFT 220
BLAST of mRNA_M-pyrifera_M_contig13787.6073.1 vs. uniprot
Match: A0A835Z8A8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8A8_9STRA) HSP 1 Score: 94.4 bits (233), Expect = 3.690e-21 Identity = 39/58 (67.24%), Postives = 45/58 (77.59%), Query Frame = 1
Query: 1 GPGKRWKFSIAYDGLSMMVFGGHRLWHGFATDNSERNSWSSFEDYPKGGYLQDLWVYT 174
GPGKRWKFS+A DG M +FGGHRLW GFA+DNS+ N W+S P GGYL DLW+YT
Sbjct: 246 GPGKRWKFSVASDGARMFIFGGHRLWQGFASDNSQDNDWNSTALLPAGGYLSDLWIYT 303
BLAST of mRNA_M-pyrifera_M_contig13787.6073.1 vs. uniprot
Match: A0A7S1U6W4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U6W4_9STRA) HSP 1 Score: 90.1 bits (222), Expect = 7.390e-21 Identity = 37/57 (64.91%), Postives = 46/57 (80.70%), Query Frame = 1
Query: 4 PGKRWKFSIAYDGLSMMVFGGHRLWHGFATDNSERNSWSSFEDYPKGGYLQDLWVYT 174
P KRW+FS+ GLSM++FGGHRLWHGFA DNS N WSS++ P+GGY+ DLWV+T
Sbjct: 168 PKKRWRFSLLSRGLSMVMFGGHRLWHGFAADNSFDNKWSSYDLLPEGGYMDDLWVFT 224
BLAST of mRNA_M-pyrifera_M_contig13787.6073.1 vs. uniprot
Match: A0A1V9YJW2_9STRA (EGF-like domain-containing protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9YJW2_9STRA) HSP 1 Score: 89.0 bits (219), Expect = 2.870e-19 Identity = 37/58 (63.79%), Postives = 43/58 (74.14%), Query Frame = 1
Query: 1 GPGKRWKFSIAYDGLSMMVFGGHRLWHGFATDNSERNSWSSFEDYPKGGYLQDLWVYT 174
GPGKRWKFS + SM +FGG+RLWHGFA NSE N WS + YPKGGYL DLW ++
Sbjct: 38 GPGKRWKFSSSSSATSMYIFGGYRLWHGFAPQNSESNLWSDYSLYPKGGYLSDLWEFS 95
BLAST of mRNA_M-pyrifera_M_contig13787.6073.1 vs. uniprot
Match: A0A7S2G1Z8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G1Z8_9STRA) HSP 1 Score: 82.8 bits (203), Expect = 4.210e-19 Identity = 33/56 (58.93%), Postives = 42/56 (75.00%), Query Frame = 1
Query: 4 PGKRWKFSIAYDGLSMMVFGGHRLWHGFATDNSERNSWSSFEDYPKGGYLQDLWVY 171
PGKR+KFS+ +G +M +FGG RLWHG+A+DNS N W S + YP GGYL D+W Y
Sbjct: 37 PGKRYKFSVVTNGETMWMFGGFRLWHGYASDNSWENDWDSHDVYPSGGYLNDMWTY 92
BLAST of mRNA_M-pyrifera_M_contig13787.6073.1 vs. uniprot
Match: A0A067CIQ6_SAPPC (EGF-like domain-containing protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067CIQ6_SAPPC) HSP 1 Score: 87.4 bits (215), Expect = 1.000e-18 Identity = 36/57 (63.16%), Postives = 42/57 (73.68%), Query Frame = 1
Query: 1 GPGKRWKFSIAYDGLSMMVFGGHRLWHGFATDNSERNSWSSFEDYPKGGYLQDLWVY 171
GPGKRWKFS + DG +M +FGG+R+WHGFA NS N WS YPKGGYL DLW +
Sbjct: 199 GPGKRWKFSSSGDGTNMYIFGGYRIWHGFAPQNSRANRWSDHTIYPKGGYLADLWQF 255
BLAST of mRNA_M-pyrifera_M_contig13787.6073.1 vs. uniprot
Match: A0A7S2LC70_9STRA (Hypothetical protein (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2LC70_9STRA) HSP 1 Score: 83.2 bits (204), Expect = 2.890e-18 Identity = 35/59 (59.32%), Postives = 45/59 (76.27%), Query Frame = 1
Query: 1 GPGKRWKFSIAYDGLS-MMVFGGHRLWHGFATDNSERNSWSSFEDYPKGGYLQDLWVYT 174
GPG+RWKFS+ D S + +FGGHRLWHGF++DN+ N W + E PKGGYL DLW+Y+
Sbjct: 6 GPGERWKFSMVADSSSNIYIFGGHRLWHGFSSDNNFENRWENSELLPKGGYLDDLWMYS 64
BLAST of mRNA_M-pyrifera_M_contig13787.6073.1 vs. uniprot
Match: T0QIK0_SAPDV (EGF-like domain-containing protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0QIK0_SAPDV) HSP 1 Score: 85.9 bits (211), Expect = 3.490e-18 Identity = 35/57 (61.40%), Postives = 42/57 (73.68%), Query Frame = 1
Query: 1 GPGKRWKFSIAYDGLSMMVFGGHRLWHGFATDNSERNSWSSFEDYPKGGYLQDLWVY 171
GPGKRWKFS + DG +M +FGG+R+WHGFA NS N WS YP+GGYL DLW +
Sbjct: 214 GPGKRWKFSSSGDGTNMYIFGGYRIWHGFAPQNSRANRWSDHTIYPEGGYLADLWQF 270
BLAST of mRNA_M-pyrifera_M_contig13787.6073.1 vs. uniprot
Match: A0A813BNU4_9DINO (Tnr protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A813BNU4_9DINO) HSP 1 Score: 85.5 bits (210), Expect = 4.770e-18 Identity = 32/57 (56.14%), Postives = 41/57 (71.93%), Query Frame = 1
Query: 1 GPGKRWKFSIAYDGLSMMVFGGHRLWHGFATDNSERNSWSSFEDYPKGGYLQDLWVY 171
GPG+RW+ ++ DG M +FGGHR+WHGF DN+ NSW + +P GGYL DLWVY
Sbjct: 219 GPGRRWRATVVGDGTHMFLFGGHRMWHGFGKDNTRSNSWQFLDQFPLGGYLDDLWVY 275 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig13787.6073.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig13787.6073.1 >prot_M-pyrifera_M_contig13787.6073.1 ID=prot_M-pyrifera_M_contig13787.6073.1|Name=mRNA_M-pyrifera_M_contig13787.6073.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=58bp GPGKRWKFSIAYDGLSMMVFGGHRLWHGFATDNSERNSWSSFEDYPKGGYback to top mRNA from alignment at M-pyrifera_M_contig13787:8250..8423+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig13787.6073.1 ID=mRNA_M-pyrifera_M_contig13787.6073.1|Name=mRNA_M-pyrifera_M_contig13787.6073.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=174bp|location=Sequence derived from alignment at M-pyrifera_M_contig13787:8250..8423+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig13787:8250..8423+ >mRNA_M-pyrifera_M_contig13787.6073.1 ID=mRNA_M-pyrifera_M_contig13787.6073.1|Name=mRNA_M-pyrifera_M_contig13787.6073.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=348bp|location=Sequence derived from alignment at M-pyrifera_M_contig13787:8250..8423+ (Macrocystis pyrifera P11B4 male)back to top |