mRNA_M-pyrifera_M_contig13774.6069.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig13774.6069.1 vs. uniprot
Match: D7FHI1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHI1_ECTSI) HSP 1 Score: 505 bits (1300), Expect = 1.180e-173 Identity = 273/393 (69.47%), Postives = 296/393 (75.32%), Query Frame = 1
Query: 1 AGGEASPLLLTSVGFTFGPEALLWKALGGTDTQDEAANEQVGVGTIDLYHXXXXXXXXXXXXXXXXXXXXVFL------TRQEEQPLFKWPGLRAARFDHGGTRAAAVIYPHPGGLNVPGGGRNPDQAWGAQVLDVETGSLLARLWDARSRPLYHLPDVGFNATDDLVVTDGALWDPRRGLRVYQFDKLGGGSGFGLFHPNGNEVLVDEGVWDLRTHRLLRTLPCQDGTVMRPSPGGDVLYTYRXXXXXXFLDMPQKRTAQETCFGVLDSSTYEQIHSHDTEKAVVQLSTDDWDGDGSYISVVERADPLLNTVDTVCSLYEIGRKRPDEADSDMDDAMSEDSDEEWEXXXHSDGGDEPNEGGVGGASW----GMDGDSTDXXXXXXDDEILVD 1149
AG SPLLLTSVG EALLWKALGGTD E A++Q+ + T +L T +EEQPLF+W GLRAARFDHGGTRAAAV+YP GGL G + +Q WGAQVLDVETGS+LARLWDARSRPLY LP+VGFNATDDLVVTDGALWDPRRGLRVYQFDKLGGG GFGLFHPNGNEV+VDEGVWDLRTHRLLRTLPCQDGTVM+P PGGDVLYTY+ F D+PQKR AQ+TCFGVLDSSTY+QIHSHDTEKAV+QLSTDD GDGS ISVVERADPLLNTVDTVCSLYEIGRKRPDEADSD+DDAMSEDSDEEWE HSDGGD+ E G + W G GDS D+ILVD
Sbjct: 32 AGSGMSPLLLTSVGSGSDSEALLWKALGGTDVNPEDADQQLWL-TSSADRAGRLRGDSALRSPVSILLGSSWLQGQQSCTEEEEQPLFRWQGLRAARFDHGGTRAAAVVYPQIGGL---GEDQRYNQTWGAQVLDVETGSVLARLWDARSRPLYPLPNVGFNATDDLVVTDGALWDPRRGLRVYQFDKLGGGGGFGLFHPNGNEVVVDEGVWDLRTHRLLRTLPCQDGTVMKPDPGGDVLYTYKPAPAGDFFDLPQKRAAQDTCFGVLDSSTYDQIHSHDTEKAVIQLSTDDGGGDGSCISVVERADPLLNTVDTVCSLYEIGRKRPDEADSDLDDAMSEDSDEEWEDADHSDGGDDLLEDGR--SRWTARGGSSGDS---------DDILVD 409
BLAST of mRNA_M-pyrifera_M_contig13774.6069.1 vs. uniprot
Match: A0A6H5JDL7_9PHAE (LisH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDL7_9PHAE) HSP 1 Score: 500 bits (1287), Expect = 1.330e-156 Identity = 269/387 (69.51%), Postives = 288/387 (74.42%), Query Frame = 1
Query: 1 AGGEASPLLLTSVGFTFGPEALLWKALGGTDTQDEAANEQVGVGTIDLYHXXXXXXXXXXXXXXXXXXXXVFLTRQEEQPLFKWPGLRAARFDHGGTRAAAVIYPHPGGLNVPGGGRNPDQAWGAQVLDVETGSLLARLWDARSRPLYHLPDVGFNATDDLVVTDGALWDPRRGLRVYQFDKLGGGSGFGLFHPNGNEVLVDEGVWDLRTHRLLRTLPCQDGTVMRPSPGGDVLYTYRXXXXXXFLDMPQKRTAQETCFGVLDSSTYEQIHSHDTEKAVVQLSTDDWDGDGSYISVVERADPLLNTVDTVCSLYEIGRKRPDEADSDMDDAMSEDSDEEWEXXXHSDGGDEPNEGGVGGASW----GMDGDSTDXXXXXXDDEILVD 1149
AG SPLLLTSVG F EALLWKALG TD E A++Q EEQPLF+W GLRAARFDHGGTRAAAV+YP GGL G + Q WGAQVLDVETGS+LARLWDARSRPLY LP++GFNATDDLVVTDGALWDPRRGLRVYQFDKLGGG GFGLFHPNGNEV+VDEGVWDLRTHRLLRTLPCQDGTVM+P PGGDVLYTY+ F D+PQKR AQ+TCFGVLDSSTY+QIHSHDTEKAV+QLSTDD GDGS ISVVERADPLLNTVDTVCSLYEIGRKRPDEADSD+DDAMSEDSDEEWE HSDGGD+ E G + W G GDS D+ILVD
Sbjct: 1970 AGSGMSPLLLTSVGSGFDSEALLWKALGRTDVNPEDADQQ------------------------------------EEQPLFRWQGLRAARFDHGGTRAAAVVYPQIGGL---GEDQRYIQTWGAQVLDVETGSVLARLWDARSRPLYPLPNIGFNATDDLVVTDGALWDPRRGLRVYQFDKLGGGGGFGLFHPNGNEVVVDEGVWDLRTHRLLRTLPCQDGTVMKPDPGGDVLYTYKPAPAGDFFDLPQKRAAQDTCFGVLDSSTYDQIHSHDTEKAVIQLSTDDGGGDGSCISVVERADPLLNTVDTVCSLYEIGRKRPDEADSDLDDAMSEDSDEEWEDADHSDGGDDLLEDGR--SRWTARGGSSGDS---------DDILVD 2306
BLAST of mRNA_M-pyrifera_M_contig13774.6069.1 vs. uniprot
Match: A0A6A4G491_9STRA (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A4G491_9STRA) HSP 1 Score: 138 bits (347), Expect = 1.410e-32 Identity = 87/212 (41.04%), Postives = 124/212 (58.49%), Query Frame = 1
Query: 370 GAQVLDVETGSLLARLWDA-RSRPLYHLPDVGFNATDDLVVTDGALWDPRRGLR-VYQFDKLGGGSGFGLFHPNGNEVLVDEGVWDLRTHRLLRTLPCQDGTVMRPSPGGDVLYTYRXXXXXXFLDMPQKRTAQETCFGVLDSSTYEQIHSHDTEKAVVQLSTDDWDGDGSYISVVERADPLLNTVD---TVCSLYEIGRKRPDEADSDMDD 990
GA VLD+ TG +L L DA RS + F+ D ++TDG LWD R R +Y+FDKL G G FHPNGNEV+V+ VWDLRT+RLLR +P D ++ +P G VL+ Y +L+ ++++ ++ F VLDS Y+ I + D + V +S + +G+ +SVVE VD ++C LY++GRKRP E DSD +D
Sbjct: 121 GAVVLDIATGDVLCDLKDAMRSNDYGAETNCCFSPCDGTILTDGMLWDARIPTRALYKFDKLSN-VGCGFFHPNGNEVIVNSAVWDLRTYRLLRMVPALDKCTIKFNPSGSVLFAYYPYAGGDYLE--RRKSKLKSWFRVLDSRDYKDITTIDLGRPVFDISLNT---NGTLLSVVEGRYLDAGDVDDDDSICRLYDVGRKRPAEDDSDAED 326
BLAST of mRNA_M-pyrifera_M_contig13774.6069.1 vs. uniprot
Match: A0A4D9D9Z0_9STRA (LisH domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D9Z0_9STRA) HSP 1 Score: 140 bits (352), Expect = 6.070e-32 Identity = 114/321 (35.51%), Postives = 146/321 (45.48%), Query Frame = 1
Query: 232 EQPLFKWPGLRAARFDHGGTRAA-------AVIYPHPGG-----LNVPGGG--------RNPDQAWGAQVLDVETGSLL-----------------------ARLWDARSRPLYHLP------------DVGFN-ATDDLVVTDGALWDPRRGLRVYQFDKLG-GGSGFGLFHPNGNEVLVDEGVWDLRTHRLLRTLPCQDGTVMRPSPGGDVLYTYRXXXXXXF---LDMPQKRTAQETCFGVLDSSTYEQIHSHDTEKAVVQLSTDDWDGDGSYISVVERADPLLNTV---DTVCSLYEIGRKRPDEADSDMDDAMSED 1005
+ P PGLRAA FD GTR A A+IY G L V GG G +V GS A RS+P H +V F+ A + LV+ DG LWD R V++FD+L GGS G FHPNG +VL+D VWDLRT L +P + ++ S GDVLY YR KR + TCF V+D++ Y IH + E+ V+ ++ DD D Y+SVVE + + D VC LYE+GR+RPDEADSD+DDA S D
Sbjct: 1393 DTPYLTLPGLRAAVFDASGTRVAGLSNENVALIYDAEVGTLLRSLRVGSGGVXXXXXXXXXXXXXXGGRVRGGTRGSXXXXXXXXXXAEEDESAVGLSVGADAHHPSLRSQPPPHTSGPRLASGALRSLNVSFSPAENHLVLCDGVLWDDREPSVVHRFDRLSHGGSNLGAFHPNGIDVLLDGTVWDLRTQSLRTMMPGVEQCAVKFSASGDVLYAYRPGGLDEADVNFRPSSKRARELTCFQVIDAADYATIHVQEMERQVLDVAVDDVD---LYVSVVEGSGAPMGPFSADDAVCRLYEVGRRRPDEADSDLDDAHSSD 1710
BLAST of mRNA_M-pyrifera_M_contig13774.6069.1 vs. uniprot
Match: G5A448_PHYSP (LisH domain-containing protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G5A448_PHYSP) HSP 1 Score: 139 bits (349), Expect = 1.430e-31 Identity = 89/221 (40.27%), Postives = 128/221 (57.92%), Query Frame = 1
Query: 370 GAQVLDVETGSLLARLWDA-RSRPLYHLPDVGFNATDDLVVTDGALWDPRRGLR-VYQFDKLGGGSGFGLFHPNGNEVLVDEGVWDLRTHRLLRTLPCQDGTVMRPSPGGDVLYTYRXXXXXXFLDMPQKRTAQETCFGVLDSSTYEQIHSHDTEKAVVQLSTDDWDGDGSYISVVERADPLLNTVD---TVCSLYEIGRKRPDEADSDMDDAMSEDSDEE 1017
GA VLD+ TG +L L DA RS + F+ D ++TDG LWD R R +Y+FDKL G G FHPNGNEV+V+ VWDLRT+RLLR +P D ++ +P G VL+ Y +L+ ++++ ++ F VLDS Y+ I + D + V +S + +G+ +SVVE VD ++C LY++GRKRP E DSD +D + S +E
Sbjct: 1370 GAVVLDIATGDVLCDLKDATRSNDYGAETNCCFSPCDGTILTDGMLWDARIPTRALYKFDKLSN-VGCGFFHPNGNEVIVNSAVWDLRTYRLLRMVPALDKCTIKFNPSGSVLFAYYPYAGGDYLE--RRKSKLKSWFRVLDSRDYKDITTIDLGRPVFDISLNT---NGTLLSVVEGRYLEAGDVDDDDSICRLYDVGRKRPAEDDSDAEDVHGQYSSDE 1584
BLAST of mRNA_M-pyrifera_M_contig13774.6069.1 vs. uniprot
Match: A0A8K1FRA3_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FRA3_PYTOL) HSP 1 Score: 138 bits (348), Expect = 1.550e-31 Identity = 86/220 (39.09%), Postives = 127/220 (57.73%), Query Frame = 1
Query: 370 GAQVLDVETGSLLARLWDA-RSRPLYHLPDVGFNATDDLVVTDGALWDPRRGLR-VYQFDKLGGGSGFGLFHPNGNEVLVDEGVWDLRTHRLLRTLPCQDGTVMRPSPGGDVLYTYRXXXXXXFLDMPQKRTAQETCFGVLDSSTYEQIHSHDTEKAVVQLSTDDWDGDGSYISVVER----ADPLLNTVDTVCSLYEIGRKRPDEADSDMDDAMSEDSD 1011
GA ++D+ TG++L L D S + F+ D ++T G LWD R R +Y+FDKL G+G FHPNGNE++++ VWDLRT +LLR +P D +R + G V+++Y D+ ++R +T F VLD+ Y +I + + E+ + LS D S +SVVE A+ ++ D VC LYE+GRKRP E DSD++DA +DSD
Sbjct: 573 GAVMVDIATGNVLCELKDTMHSNDYKRATNCCFSTDDSTILTGGILWDARIPTRALYKFDKLSN-VGYGCFHPNGNEIIINSAVWDLRTFQLLRMVPALDKCNVRFNSVGSVMFSYNPHQLTE--DIERRRGRAKTWFRVLDARDYREISTIELERPIYDLSIDQ---KSSLLSVVEGRYLDAESYVDD-DPVCRLYEVGRKRPSEDDSDVEDAHDQDSD 785
BLAST of mRNA_M-pyrifera_M_contig13774.6069.1 vs. uniprot
Match: A0A6A3F5T6_9STRA (LisH domain-containing protein n=2 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3F5T6_9STRA) HSP 1 Score: 138 bits (347), Expect = 2.190e-31 Identity = 87/212 (41.04%), Postives = 124/212 (58.49%), Query Frame = 1
Query: 370 GAQVLDVETGSLLARLWDA-RSRPLYHLPDVGFNATDDLVVTDGALWDPRRGLR-VYQFDKLGGGSGFGLFHPNGNEVLVDEGVWDLRTHRLLRTLPCQDGTVMRPSPGGDVLYTYRXXXXXXFLDMPQKRTAQETCFGVLDSSTYEQIHSHDTEKAVVQLSTDDWDGDGSYISVVERADPLLNTVD---TVCSLYEIGRKRPDEADSDMDD 990
GA VLD+ TG +L L DA RS + F+ D ++TDG LWD R R +Y+FDKL G G FHPNGNEV+V+ VWDLRT+RLLR +P D ++ +P G VL+ Y +L+ ++++ ++ F VLDS Y+ I + D + V +S + +G+ +SVVE VD ++C LY++GRKRP E DSD +D
Sbjct: 699 GAVVLDIATGDVLCDLKDAMRSNDYGAETNCCFSPCDGTILTDGMLWDARIPTRALYKFDKLSN-VGCGFFHPNGNEVIVNSAVWDLRTYRLLRMVPALDKCTIKFNPSGSVLFAYYPYAGGDYLE--RRKSKLKSWFRVLDSRDYKDITTIDLGRPVFDISLNT---NGTLLSVVEGRYLDAGDVDDDDSICRLYDVGRKRPAEDDSDAED 904
BLAST of mRNA_M-pyrifera_M_contig13774.6069.1 vs. uniprot
Match: A0A6A3N5G8_9STRA (LisH domain-containing protein n=1 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A3N5G8_9STRA) HSP 1 Score: 138 bits (347), Expect = 2.500e-31 Identity = 87/212 (41.04%), Postives = 124/212 (58.49%), Query Frame = 1
Query: 370 GAQVLDVETGSLLARLWDA-RSRPLYHLPDVGFNATDDLVVTDGALWDPRRGLR-VYQFDKLGGGSGFGLFHPNGNEVLVDEGVWDLRTHRLLRTLPCQDGTVMRPSPGGDVLYTYRXXXXXXFLDMPQKRTAQETCFGVLDSSTYEQIHSHDTEKAVVQLSTDDWDGDGSYISVVERADPLLNTVD---TVCSLYEIGRKRPDEADSDMDD 990
GA VLD+ TG +L L DA RS + F+ D ++TDG LWD R R +Y+FDKL G G FHPNGNEV+V+ VWDLRT+RLLR +P D ++ +P G VL+ Y +L+ ++++ ++ F VLDS Y+ I + D + V +S + +G+ +SVVE VD ++C LY++GRKRP E DSD +D
Sbjct: 1070 GAVVLDIATGDVLCDLKDAMRSNDYGAETNCCFSPCDGTILTDGMLWDARIPTRALYKFDKLSN-VGCGFFHPNGNEVIVNSAVWDLRTYRLLRMVPALDKCTIKFNPSGSVLFAYYPYAGGDYLE--RRKSKLKSWFRVLDSRDYKDITTIDLGRPVFDISLNT---NGTLLSVVEGRYLDAGDVDDDDSICRLYDVGRKRPAEDDSDAED 1275
BLAST of mRNA_M-pyrifera_M_contig13774.6069.1 vs. uniprot
Match: F0VZP7_9STRA (Uncharacterized protein AlNc14C3G376 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0VZP7_9STRA) HSP 1 Score: 138 bits (347), Expect = 2.680e-31 Identity = 98/276 (35.51%), Postives = 147/276 (53.26%), Query Frame = 1
Query: 223 RQEEQPLFKWPGLRAARFDHGGTRAAAVI------YPHPGGLNVPGGGRNPDQAWGAQVLDVETGSLLARLWDARSRPLYHLPDVGFNATDDL-VVTDGALWDPRRG-LRVYQFDKLGGGSGFGLFHPNGNEVLVDEGVWDLRTHRLLRTLPCQDGTVMRPSPGGDVLYTYRXXXXXX--FLDMPQKRTAQETCFGVLDSSTYEQIHSHDTEKAVVQLSTDDWDGDGSYISVVERADPLLNTV---DTVCSLYEIGRKRPDEADSDMDDAMSEDSD 1011
R+E+ ++ G+R +++H G A+ + PG + G P GA ++DV +G +++ L D Y L + DD ++TDG LWD R V++FDKL +G G FHPNGNEV+++ VWDLRT+RLLR +P D + SP G VL+ Y + D+ ++R+ T F VLD+ Y++I + + E+ +V L D G+++SVVE + C LYEIGR+R EADSD++D SED D
Sbjct: 1427 REEDMIQWRRIGVRCPKYNHFGDHLVALDVTNTEDHDRPGNTGLSTRGNRPR---GALIVDVLSGQVISSLKDVNRSNDYGLDTNACYSQDDTKILTDGMLWDVRSPKTAVHKFDKLSN-AGNGFFHPNGNEVVINAAVWDLRTYRLLRVVPALDKSQASFSPQGSVLFVYYPLKSLGGDYDDLKRRRSKLRTWFRVLDARDYKEISTVELERDIVDLRVDPL---GNFLSVVEGFSAKEGASIKRNNSCILYEIGRRRAAEADSDVED-HSEDED 1694
BLAST of mRNA_M-pyrifera_M_contig13774.6069.1 vs. uniprot
Match: A0A024G1Q1_9STRA (LisH domain-containing protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024G1Q1_9STRA) HSP 1 Score: 138 bits (347), Expect = 2.680e-31 Identity = 101/277 (36.46%), Postives = 150/277 (54.15%), Query Frame = 1
Query: 223 RQEEQPLFKWPGLRAARFDHGGTRAAAVI------YPHPGGLNVPGGGRNPDQAWGAQVLDVETGSLLARLWDARSRPLYHLPDVGFNATDDL-VVTDGALWDPRRG-LRVYQFDKLGGGSGFGLFHPNGNEVLVDEGVWDLRTHRLLRTLPCQDGTVMRPSPGGDVLYTYRXXXXXX--FLDMPQKRTAQETCFGVLDSSTYEQIHSHDTEKAVVQLSTDDWDGDGSYISVVE----RADPLLNTVDTVCSLYEIGRKRPDEADSDMDDAMSEDSD 1011
R+E+ +++ G R +++H G A+ + G ++ G P GA +LDV TG + +RL D Y + A DD ++TDG LWD R +++FDKL +G G FHPNGNEV+++ VWDLRT+RLLR +P D + SP G VL+ Y + D+ +KR T F VLD+ Y++I + + E+ +V L D G+++SVVE + +N ++ C LYEIGR+R EADSD++D SED D
Sbjct: 1434 REEDMLQWRYIGARCPKYNHFGDHLVALDVTNSEEHDRSGNTSLALRGTRPR---GALILDVITGQVTSRLNDVNRSNDYGVDTNACYAQDDTRILTDGMLWDVRSTKTALHKFDKLSN-AGNGFFHPNGNEVVINAAVWDLRTYRLLRVVPALDKSQAFFSPQGSVLFVYYPLKSLGGDYDDVKRKRCKLRTWFRVLDARDYKEISTVELERDIVDLRVDPL---GNFLSVVEGSSAKEGASINRNNS-CLLYEIGRRRAAEADSDVED-HSEDED 1701 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig13774.6069.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig13774.6069.1 >prot_M-pyrifera_M_contig13774.6069.1 ID=prot_M-pyrifera_M_contig13774.6069.1|Name=mRNA_M-pyrifera_M_contig13774.6069.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=444bp AGGEASPLLLTSVGFTFGPEALLWKALGGTDTQDEAANEQVGVGTIDLYHback to top mRNA from alignment at M-pyrifera_M_contig13774:416..7223- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig13774.6069.1 ID=mRNA_M-pyrifera_M_contig13774.6069.1|Name=mRNA_M-pyrifera_M_contig13774.6069.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=6808bp|location=Sequence derived from alignment at M-pyrifera_M_contig13774:416..7223- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig13774:416..7223- >mRNA_M-pyrifera_M_contig13774.6069.1 ID=mRNA_M-pyrifera_M_contig13774.6069.1|Name=mRNA_M-pyrifera_M_contig13774.6069.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=2664bp|location=Sequence derived from alignment at M-pyrifera_M_contig13774:416..7223- (Macrocystis pyrifera P11B4 male)back to top |