mRNA_M-pyrifera_M_contig13752.6059.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig13752.6059.1 vs. uniprot
Match: D8LS86_ECTSI (PARP catalytic domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LS86_ECTSI) HSP 1 Score: 163 bits (413), Expect = 3.360e-46 Identity = 75/105 (71.43%), Postives = 86/105 (81.90%), Query Frame = 1
Query: 1 PCGEPTCNVCNICTHGFKLADNTGATARRKNFPLRYGDGLYFSSVSGKANDYAELSEKTNPSGKAVRCMFMADVAVANVFKTFEYRLDPDKHECPPPGYDAVLGE 315
PCGE TC VCNICTHGF+L DN G TARR NF LRYGDGLYFSSVSGKANDYAELSEKT+ SGK VRCMF++ V V F T+E +L P+ +CPPPG+D+V+GE
Sbjct: 344 PCGESTCKVCNICTHGFQLRDNVGDTARRTNFDLRYGDGLYFSSVSGKANDYAELSEKTDRSGKKVRCMFLSSVTVGRAFITYEGKLPPE--QCPPPGFDSVVGE 446
BLAST of mRNA_M-pyrifera_M_contig13752.6059.1 vs. uniprot
Match: D8LS87_ECTSI (PARP catalytic domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS87_ECTSI) HSP 1 Score: 146 bits (368), Expect = 9.240e-40 Identity = 67/106 (63.21%), Postives = 81/106 (76.42%), Query Frame = 1
Query: 1 PCGEPTCNVCNICTHGFKLADNTGATARRKNFPLRYGDGLYFSSVSGKANDYAELSEKTNPSGKAVRCMFMADVAVANVFKTFEYRLDPDKHECPPPGYDAVLGEV 318
PC + C VC+ICTHGF L N G TARR NF LRYG+GLYFSSVSGKANDYA+ SEKT+ +G+ +RCMF+A+VA FKT E L ++ECPP GYD+V+GEV
Sbjct: 324 PCSDKGCKVCSICTHGFTLQGNVGGTARRTNFGLRYGEGLYFSSVSGKANDYADFSEKTDSNGRRLRCMFVANVAAGKAFKTHETSLQ--QNECPPAGYDSVVGEV 427
BLAST of mRNA_M-pyrifera_M_contig13752.6059.1 vs. uniprot
Match: D8LKU8_ECTSI (PARP catalytic domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKU8_ECTSI) HSP 1 Score: 137 bits (344), Expect = 2.990e-38 Identity = 64/106 (60.38%), Postives = 74/106 (69.81%), Query Frame = 1
Query: 1 PCGEPTCNVCNICTHGFKLADNTGATARRKNFPLRYGDGLYFSSVSGKANDYAELSEKTNPSGKAVRCMFMADVAVANVFKTFEYRLDPDKHECPPPGYDAVLGEV 318
PC CNVCNICTHGF L DN TARR N+ RYG+GLYFSSVSGK+NDYA+ SEK GK VRCMF+A+V N + T + L D CPP GYD+V+GEV
Sbjct: 102 PCSSKACNVCNICTHGFVLRDNVRGTARRANYRRRYGEGLYFSSVSGKSNDYAQQSEKVGSDGKKVRCMFVANVTAGNAYLTQQGSLGQDM--CPPAGYDSVVGEV 205
BLAST of mRNA_M-pyrifera_M_contig13752.6059.1 vs. uniprot
Match: D7FXR1_ECTSI (PARP catalytic domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXR1_ECTSI) HSP 1 Score: 125 bits (313), Expect = 1.330e-33 Identity = 59/106 (55.66%), Postives = 73/106 (68.87%), Query Frame = 1
Query: 1 PCGEPTCNVCNICTHGFKLADNTGATARRKNFPLRYGDGLYFSSVSGKANDYAELSEKTNPSGKAVRCMFMADVAVANVFKTFEYRLDPDKHECPPPGYDAVLGEV 318
PCG+ +C+VCNIC GFKL N TAR FPLRYG+G+Y +SVSGKANDYA S K + +RCMF+A+VAV FKT L + +CPPPGY +V+GEV
Sbjct: 99 PCGKSSCSVCNICKLGFKLGANVAGTARATGFPLRYGEGVYLTSVSGKANDYASRSAKKIGNDSELRCMFVANVAVGRTFKTKSTSLPAN--QCPPPGYQSVVGEV 202
BLAST of mRNA_M-pyrifera_M_contig13752.6059.1 vs. uniprot
Match: D8LKU6_ECTSI (PARP catalytic domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKU6_ECTSI) HSP 1 Score: 127 bits (318), Expect = 1.370e-33 Identity = 59/106 (55.66%), Postives = 74/106 (69.81%), Query Frame = 1
Query: 1 PCGEPTCNVCNICTHGFKLADNTGATARRKNFPLRYGDGLYFSSVSGKANDYAELSEKTNPSGKAVRCMFMADVAVANVFKTFEYRLDPDKHECPPPGYDAVLGEV 318
PC CNVCNICT+GF L N G TA+R + LRYG+GLYFSSVSGK+NDYA+ SEK GK VRCMF+A+V N + T + L ++ CPP G+D+V+GE
Sbjct: 164 PCSSRGCNVCNICTNGFMLQGNVGGTAKRTSIGLRYGEGLYFSSVSGKSNDYAQGSEKVGSDGKKVRCMFIANVTAGNAYLTQQVSLG--QNMCPPAGHDSVVGEA 267
BLAST of mRNA_M-pyrifera_M_contig13752.6059.1 vs. uniprot
Match: D8LS88_ECTSI (PARP catalytic domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS88_ECTSI) HSP 1 Score: 129 bits (325), Expect = 1.510e-33 Identity = 61/106 (57.55%), Postives = 76/106 (71.70%), Query Frame = 1
Query: 1 PCGEPTCNVCNICTHGFKLADNTGATARRKNFPLRYGDGLYFSSVSGKANDYAELSEKTNPSGKAVRCMFMADVAVANVFKTFEYRLDPDKHECPPPGYDAVLGEV 318
PCG +C++CNI GFKL +N G TA +NF LRYG G+YFSSVSGKANDYA+L+ KT G +RCMF+A+VA + T E LD K CPPPGY++V+GEV
Sbjct: 318 PCGLRSCSLCNISMRGFKLDENVGRTALARNFNLRYGKGVYFSSVSGKANDYADLTAKTAKDGTKLRCMFVANVAAGKAYSTKEKALDDGK--CPPPGYESVVGEV 421
BLAST of mRNA_M-pyrifera_M_contig13752.6059.1 vs. uniprot
Match: A0A6H5JBF5_9PHAE (PARP catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBF5_9PHAE) HSP 1 Score: 124 bits (310), Expect = 3.850e-33 Identity = 59/106 (55.66%), Postives = 71/106 (66.98%), Query Frame = 1
Query: 1 PCGEPTCNVCNICTHGFKLADNTGATARRKNFPLRYGDGLYFSSVSGKANDYAELSEKTNPSGKAVRCMFMADVAVANVFKTFEYRLDPDKHECPPPGYDAVLGEV 318
PCG+ +C+VCNIC GFKL N TAR PLRYG+G+Y +SVSGKANDYA S K +RCMF+A VAV FKT RL + +CPPPGY +V+GEV
Sbjct: 100 PCGKSSCSVCNICKLGFKLGANVAGTARATGVPLRYGEGIYLTSVSGKANDYASRSAKKIGIASELRCMFVASVAVGRAFKTKSTRLPAN--QCPPPGYQSVVGEV 203
BLAST of mRNA_M-pyrifera_M_contig13752.6059.1 vs. uniprot
Match: A0A6H5JYU8_9PHAE (PARP catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYU8_9PHAE) HSP 1 Score: 126 bits (317), Expect = 4.010e-32 Identity = 60/104 (57.69%), Postives = 74/104 (71.15%), Query Frame = 1
Query: 1 PCGEPTCNVCNICTHGFKLADNTGATARRKNFPLRYGDGLYFSSVSGKANDYAELSEKTNPSGKAVRCMFMADVAVANVFKTFEYRLDPDKHECPPPGYDAVLG 312
PCG +C+VC+IC GFK+ DN G TARR F LRYG+G+YFSSVSGKANDYA S+KT P G+ +RCMF+A VA N + T E L +K CPP G ++V G
Sbjct: 398 PCGLSSCSVCSICMQGFKIKDNVGTTARRTGFSLRYGEGVYFSSVSGKANDYARFSQKTAPDGRRLRCMFVAYVAKGNPYLTKEASLPRNK--CPPSGLESVEG 499
BLAST of mRNA_M-pyrifera_M_contig13752.6059.1 vs. uniprot
Match: D7FXR2_ECTSI (PARP catalytic domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXR2_ECTSI) HSP 1 Score: 122 bits (307), Expect = 4.600e-31 Identity = 60/106 (56.60%), Postives = 71/106 (66.98%), Query Frame = 1
Query: 1 PCGEPTCNVCNICTHGFKLADNTGATARRKNFPLRYGDGLYFSSVSGKANDYAELSEKTNPSGKAVRCMFMADVAVANVFKTFEYRLDPDKHECPPPGYDAVLGEV 318
PCGE +C+VCNIC GF+L N TAR FPLRYG G+Y +SVSGKANDYA S K +RCMF+A VA+ N FKT RL D +CPPPGY +V+GE
Sbjct: 297 PCGESSCSVCNICKLGFQLGPNVARTARATRFPLRYGAGIYLTSVSGKANDYASRSAK-KVGELELRCMFVASVALGNTFKTTSARLPAD--QCPPPGYHSVVGEA 399
BLAST of mRNA_M-pyrifera_M_contig13752.6059.1 vs. uniprot
Match: D8LKU5_ECTSI (TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKU5_ECTSI) HSP 1 Score: 123 bits (308), Expect = 1.760e-30 Identity = 60/106 (56.60%), Postives = 70/106 (66.04%), Query Frame = 1
Query: 1 PCGEPTCNVCNICTHGFKLADNTGATARRKNFPLRYGDGLYFSSVSGKANDYAELSEKTNPSGKAVRCMFMADVAVANVFKTFEYRLDPDKHECPPPGYDAVLGEV 318
PCG +C+VCNIC GFKL N TAR PLRYG G+YFSSVSGKANDYA LS KT G +RCMF+A+VA F T + L + ECPP G +V+GEV
Sbjct: 546 PCGLSSCSVCNICMLGFKLGKNVARTARASGIPLRYGTGIYFSSVSGKANDYARLSAKTGSDGAELRCMFVANVAGGKAFSTKKSHLP--QSECPPSGCQSVVGEV 649 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig13752.6059.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig13752.6059.1 >prot_M-pyrifera_M_contig13752.6059.1 ID=prot_M-pyrifera_M_contig13752.6059.1|Name=mRNA_M-pyrifera_M_contig13752.6059.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=106bp PCGEPTCNVCNICTHGFKLADNTGATARRKNFPLRYGDGLYFSSVSGKANback to top mRNA from alignment at M-pyrifera_M_contig13752:7442..8119- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig13752.6059.1 ID=mRNA_M-pyrifera_M_contig13752.6059.1|Name=mRNA_M-pyrifera_M_contig13752.6059.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=678bp|location=Sequence derived from alignment at M-pyrifera_M_contig13752:7442..8119- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig13752:7442..8119- >mRNA_M-pyrifera_M_contig13752.6059.1 ID=mRNA_M-pyrifera_M_contig13752.6059.1|Name=mRNA_M-pyrifera_M_contig13752.6059.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=636bp|location=Sequence derived from alignment at M-pyrifera_M_contig13752:7442..8119- (Macrocystis pyrifera P11B4 male)back to top |