mRNA_M-pyrifera_M_contig13737.6052.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig13737.6052.1
Unique NamemRNA_M-pyrifera_M_contig13737.6052.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
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BLAST of mRNA_M-pyrifera_M_contig13737.6052.1 vs. uniprot
Match: A0A6H5KMW4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMW4_9PHAE)

HSP 1 Score: 364 bits (934), Expect = 1.940e-116
Identity = 197/228 (86.40%), Postives = 204/228 (89.47%), Query Frame = 1 
Query:    1 VNKKIFVRGLPWETTDQSLRAVFEQYGEIAEATVVMDKMTQKSKGYGFVTFKGMDGAHAALENPEKNIDGRVSLCNLAALRSSQPLPQRGGAGAVQGGGMXXXXXXXXXXX-GASGEDVSARKIFVRGLSWDTTTESLRTMFSQFGELEDAVVTTDRVSGKSKGYGFVTFRYAASASSAVAEPEKQLDGRLTHCNIAAEGASNRNKPQGFGAPQASQQWGMMGQQQQF 681
            VNKKIFVRGLPWET DQSLRAVFEQYGEIAEATVVMDKMTQKSKGYGFVTFK MDGAHAALENPEK IDGRVSLCNLAALRSSQPLPQR G G +QGG M     XXXXXX G SGED+SARKIFVRGLSWDTTTESLRTMFSQFGELED VVTTDR SGKSKGYGFVTFRYA +A++AVAEPEKQLDGRLTHCNIAAEGAS R K Q +G PQA Q WGMMGQQQQ+
Sbjct:   61 VNKKIFVRGLPWETNDQSLRAVFEQYGEIAEATVVMDKMTQKSKGYGFVTFKSMDGAHAALENPEKMIDGRVSLCNLAALRSSQPLPQRAGGG-MQGGVMQGGAGXXXXXXVGGSGEDISARKIFVRGLSWDTTTESLRTMFSQFGELEDCVVTTDRASGKSKGYGFVTFRYAVNAAAAVAEPEKQLDGRLTHCNIAAEGASGR-KNQNYGGPQAGQHWGMMGQQQQY 286
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BLAST of mRNA_M-pyrifera_M_contig13737.6052.1 vs. uniprot
Match: D7FN41_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN41_ECTSI)

HSP 1 Score: 365 bits (938), Expect = 1.360e-115
Identity = 194/228 (85.09%), Postives = 201/228 (88.16%), Query Frame = 1 
Query:    1 VNKKIFVRGLPWETTDQSLRAVFEQYGEIAEATVVMDKMTQKSKGYGFVTFKGMDGAHAALENPEKNIDGRVSLCNLAALRSSQPLPQRGGAGAVQGGGMXXXXXXXXXXX-GASGEDVSARKIFVRGLSWDTTTESLRTMFSQFGELEDAVVTTDRVSGKSKGYGFVTFRYAASASSAVAEPEKQLDGRLTHCNIAAEGASNRNKPQGFGAPQASQQWGMMGQQQQF 681
            VNKKIFVRGLPWET DQSLRAVFEQYGEIAEATVVMDKMTQKSKGYGFVTFK MDGAHAALENPEK IDGRVSLCNLAALRSSQPLP R G G +QGG M        XX  G SGEDVSARKIFVRGLSWDTTTESLRTMFSQFGELED VVTTDR SGKSKGYGFVTFR+AA+A++AVAEPEKQLDGRLTHCNIAAEGASNR K Q +G PQA Q WGMMGQQQQ+
Sbjct:  161 VNKKIFVRGLPWETNDQSLRAVFEQYGEIAEATVVMDKMTQKSKGYGFVTFKSMDGAHAALENPEKMIDGRVSLCNLAALRSSQPLPARAGGG-MQGGAMQGGAGGMMXXAVGGSGEDVSARKIFVRGLSWDTTTESLRTMFSQFGELEDCVVTTDRASGKSKGYGFVTFRFAANAAAAVAEPEKQLDGRLTHCNIAAEGASNR-KNQNYGGPQAGQHWGMMGQQQQY 386
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BLAST of mRNA_M-pyrifera_M_contig13737.6052.1 vs. uniprot
Match: A0A388KX58_CHABU (Uncharacterized protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388KX58_CHABU)

HSP 1 Score: 187 bits (474), Expect = 3.240e-49
Identity = 93/202 (46.04%), Postives = 130/202 (64.36%), Query Frame = 1 
Query:    4 NKKIFVRGLPWETTDQSLRAVFEQYGEIAEATVVMDKMTQKSKGYGFVTFKGMDGAHAALENPEKNIDGRVSLCNLAALRSSQPLPQRGGAGAVQGGGMXXXXXXXXXXXGASGEDVSARKIFVRGLSWDTTTESLRTMFSQFGELEDAVVTTDRVSGKSKGYGFVTFRYAASASSAVAEPEKQLDGRLTHCNIAAEGASNR 609
            ++K+FVRGL WETT Q+LR  F ++GEI E  V+ DK T KS+G+GF+TFK MD A  AL  P K IDGR+++CNLAA          G  G  QGGG               G D S RK+++ GLS++T+TE+L  +F QFGE+E+  V  D+ +GKS+G+GFVT++    A+ A++EP + +DGR  HC +AAEG + +
Sbjct:   73 HRKLFVRGLAWETTSQALRDAFAEFGEIEEGAVITDKATGKSRGFGFITFKHMDSAQRALREPSKKIDGRITVCNLAAA---------GTLGGSQGGG---------------GGDQSQRKLYIGGLSYETSTETLLNIFGQFGEIEEGSVAYDKATGKSRGFGFVTYKTVEGANRALSEPTRTIDGRTVHCKLAAEGQAQK 250
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BLAST of mRNA_M-pyrifera_M_contig13737.6052.1 vs. uniprot
Match: A0A2D4CE34_PYTIN (Uncharacterized protein n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CE34_PYTIN)

HSP 1 Score: 181 bits (460), Expect = 5.870e-47
Identity = 108/221 (48.87%), Postives = 140/221 (63.35%), Query Frame = 1 
Query:    4 NKKIFVRGLPWETTDQSLRAVFEQYGEIAEATVVMDKMTQKSKGYGFVTFKGMDGAHAALENPEKNIDGRVSLCNLAALR----------SSQPLPQRGGAGAVQGGGMXXXXXXXXXXXGA----------SGEDVSARKIFVRGLSWDTTTESLRTMFSQFGELEDAVVTTDRVSGKSKGYGFVTFRYAASASSAVAEPEKQLDGRLTHCNIAAEGASN 606
            ++K+FVRGL WETT + LR  F  +G++ EA V+ DK + KS+GYGFVTF  M GA  A+E     IDGRV+ CNLAA+R          S Q  P R     +Q   M XXXXXXXXX  +           G D S RK+FVRGL+WDT+ E+LR +F  FGEL +A V  +R +GKSKG+GFVT+R+ ASA  A+ +P K +DGR  +CN+A+ G SN
Sbjct:   91 HRKVFVRGLAWETTSERLREAFSVFGDVDEAAVIYDKASGKSRGYGFVTFIDMHGAEQAVEKQTLEIDGRVTTCNLAAVRTQQSDEHASHSQQQTPSRNSQPQLQPSVMMXXXXXXXXXMASVSTPPGQGFRGGNDESERKLFVRGLAWDTSDETLRAVFQVFGELVEASVVRERKTGKSKGFGFVTYRHRASAELALQQPAKMIDGRQVNCNLASLGRSN 311
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BLAST of mRNA_M-pyrifera_M_contig13737.6052.1 vs. uniprot
Match: A0A2K1L9M1_PHYPA (Uncharacterized protein n=2 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1L9M1_PHYPA)

HSP 1 Score: 178 bits (452), Expect = 5.060e-46
Identity = 88/207 (42.51%), Postives = 128/207 (61.84%), Query Frame = 1 
Query:    1 VNKKIFVRGLPWETTDQSLRAVFEQYGEIAEATVVMDKMTQKSKGYGFVTFKGMDGAHAALENPEKNIDGRVSLCNLAALRSSQPLPQRGGAGAVQGGGMXXXXXXXXXXXGASGEDVSARKIFVRGLSWDTTTESLRTMFSQFGELEDAVVTTDRVSGKSKGYGFVTFRYAASASSAVAEPEKQLDGRLTHCNIAAEGASNRNKPQ 621
            V++K+FVRGL WET+  +LR  FEQYGE+ EA V+ DK T KS+G+GF+TFK MD AH AL+ P KNIDGR+++CNLA+  S+                            G S  D + RK+++ GLS+DTT+++L  +FSQ+GE+E+  +  D+ + KS+G+ FVTF+    A  A+ +  K ++GR     +AAEG   R +PQ
Sbjct:   92 VHRKLFVRGLAWETSSMALREAFEQYGEVEEACVITDKGTGKSRGFGFITFKHMDSAHRALKEPSKNIDGRITVCNLASAGSTS---------------------------GTSSTDQAQRKLYIGGLSYDTTSDTLLNIFSQYGEIEEGAIAYDKNTNKSRGFAFVTFKSIEGAKRAIEDSNKSIEGRHVTVKLAAEGQRERTQPQ 271
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BLAST of mRNA_M-pyrifera_M_contig13737.6052.1 vs. uniprot
Match: A0A2K1JG53_PHYPA (Uncharacterized protein n=2 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1JG53_PHYPA)

HSP 1 Score: 170 bits (430), Expect = 5.400e-43
Identity = 89/207 (43.00%), Postives = 126/207 (60.87%), Query Frame = 1 
Query:    1 VNKKIFVRGLPWETTDQSLRAVFEQYGEIAEATVVMDKMTQKSKGYGFVTFKGMDGAHAALENPEKNIDGRVSLCNLAALRSSQPLPQRGGAGAVQGGGMXXXXXXXXXXXGASGEDVSARKIFVRGLSWDTTTESLRTMFSQFGELEDAVVTTDRVSGKSKGYGFVTFRYAASASSAVAEPEKQLDGRLTHCNIAAEGASNRNKPQ 621
            V++K+FVRGL WET+  +LR  FEQYGE+ EA V+ DK T KS+G+GFVTFK MD A  AL+ P KNIDGR+++CNLA+            AG   G                S  D + RK+++ GLS+DTT+++L  +FSQ GE+E+  +  D+ + KS+G+ FVTF+    A  A+ +  K ++GR     +AAEG   R +PQ
Sbjct:   92 VHRKLFVRGLAWETSSVALREAFEQYGEVEEACVITDKGTGKSRGFGFVTFKHMDSAQRALKEPSKNIDGRITVCNLAS------------AGGTSG---------------TSSSDQAQRKLYIGGLSYDTTSDTLLNIFSQHGEIEEGAIAYDKNTNKSRGFAFVTFKTIDGAKRAMEDSNKIIEGRHVTVKLAAEGQRERTQPQ 271
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BLAST of mRNA_M-pyrifera_M_contig13737.6052.1 vs. uniprot
Match: D8QPR6_SELML (Uncharacterized protein n=1 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8QPR6_SELML)

HSP 1 Score: 169 bits (427), Expect = 7.750e-43
Identity = 87/216 (40.28%), Postives = 130/216 (60.19%), Query Frame = 1 
Query:    4 NKKIFVRGLPWETTDQSLRAVFEQYGEIAEATVVMDKMTQKSKGYGFVTFKGMDGAHAALENPEKNIDGRVSLCNLAALRSSQPLPQRGGAGAVQGGGMXXXXXXXXXXXGASGEDVSARKIFVRGLSWDTTTESLRTMFSQFGELEDAVVTTDRVSGKSKGYGFVTFRYAASASSAVAEPEKQLDGRLTHCNIAAEG----ASNRNKPQGFGAPQ 639
            ++K+FVRGL WETT Q+LR  F+ YGEI E  V+ DK T KS+G+GF+TFK MD A  AL+ P K IDGR+++CNLA++ SS                            GA   D + RK+++ GLS++T+ E+L  +FSQ+GE+E+  V  D+ + KS+G+ F+T++   +A  A+ +P K ++GR     +AAEG    A +++  Q  G PQ
Sbjct:   70 HRKLFVRGLAWETTSQALRDAFQHYGEIEEGAVITDKATGKSRGFGFITFKHMDSAQRALKEPSKTIDGRITVCNLASVGSSA---------------------------GAGSADQAQRKLYIGGLSYETSNETLLNIFSQYGEIEEGAVAYDKNTNKSRGFAFITYKSVEAARKAIDDPNKTIEGRHVIVKLAAEGQKEKAVSQSSAQNQGGPQ 258
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BLAST of mRNA_M-pyrifera_M_contig13737.6052.1 vs. uniprot
Match: A0A1Y1I415_KLENI (RNA binding domain protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1I415_KLENI)

HSP 1 Score: 171 bits (433), Expect = 8.080e-43
Identity = 92/205 (44.88%), Postives = 125/205 (60.98%), Query Frame = 1 
Query:    7 KKIFVRGLPWETTDQSLRAVFEQYGEIAEATVVMDKMTQKSKGYGFVTFKGMDGAHAALENPEKNIDGRVSLCNLAALRSSQPLPQRGGAGAVQGGGMXXXXXXXXXXXGASGEDVSARKIFVRGLSWDTTTESLRTMFSQFGELEDAVVTTDRVSGKSKGYGFVTFRYAASASSAVAEPEKQLDGRLTHCNIAAEGASNRNKPQ 621
            +K+FVRGLPWETT + L A +E++G+I EA V++DK++ KSKG+GFVTF+ +D A  AL NP+K I  R    NLAAL SS          A Q                    DVS RK++V GL++DTT E+L  +F +FGE+E+  + T+R +GKS+G+ FVTFR A  A +A AEP K +D R     +AAEG   R + Q
Sbjct:   69 RKLFVRGLPWETTTEELTAAYEEFGDIDEAAVIVDKISGKSKGFGFVTFRHIDSAQKALRNPKKQIRDRTVHANLAALGSS----------ATQ----------------RDNNDVSQRKVYVGGLNYDTTNETLLEVFGKFGEIEEGSIATERTTGKSRGFAFVTFRTAEGAQAACAEPVKHIDTRNVQVKLAAEGRQQRQQEQ 247
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BLAST of mRNA_M-pyrifera_M_contig13737.6052.1 vs. uniprot
Match: A0A067CRS6_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CRS6_SAPPC)

HSP 1 Score: 169 bits (427), Expect = 8.950e-43
Identity = 103/215 (47.91%), Postives = 133/215 (61.86%), Query Frame = 1 
Query:    1 VNKKIFVRGLPWETTDQSLRAVFEQYGEIAEATVVMDKMTQKSKGYGFVTFKGMDGAHAALENPEKNIDGRVSLCNLAALRSSQPLPQRGGAGA------------VQGGGMXXXXXXXXXXXGASGE-----DVSARKIFVRGLSWDTTTESLRTMFSQFGELEDAVVTTDRVSGKSKGYGFVTFRYAASASSAVAEPEKQLDGRLTHCNIAAE 594
            V++KIFVRGLPW+ T   LR  F Q+G I +A V+MDK T KSKG+GFVTF  M+ A  ALE    +IDGR   CNLAA   S    QR    A                  XXXXXXXXX    SG+     D + RK+FVRGL WDT  E++ T F+++GE+ED  V  DR +GKSKGYGF+ +R+  +A  A+A+P K ++GR THCN+A++
Sbjct:   65 VHRKIFVRGLPWDITSDRLRLHFVQFGPIDDAIVIMDKATGKSKGFGFVTFADMEAADHALEAQPHDIDGRKCPCNLAATHESSSSRQRADVAASYQKAPPAAYTPXXXXXXXXXXXXXXXSSSTSGDAGPPGDETDRKLFVRGLHWDTQVETVTTEFAKYGEIEDISVMKDRQTGKSKGYGFIVYRHQNAAKRALAQPMKLIEGRNTHCNLASQ 279
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BLAST of mRNA_M-pyrifera_M_contig13737.6052.1 vs. uniprot
Match: A0A2R6X2I3_MARPO (Uncharacterized protein n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6X2I3_MARPO)

HSP 1 Score: 168 bits (426), Expect = 1.260e-42
Identity = 84/202 (41.58%), Postives = 125/202 (61.88%), Query Frame = 1 
Query:    4 NKKIFVRGLPWETTDQSLRAVFEQYGEIAEATVVMDKMTQKSKGYGFVTFKGMDGAHAALENPEKNIDGRVSLCNLAALRSSQPLPQRGGAGAVQGGGMXXXXXXXXXXXGASGEDVSARKIFVRGLSWDTTTESLRTMFSQFGELEDAVVTTDRVSGKSKGYGFVTFRYAASASSAVAEPEKQLDGRLTHCNIAAEGASNR 609
            ++K+FVRGL WETT Q+LR  FEQYGEI E  V+ DK T KS+G+GF+TFK MD A  AL+ P KNIDGR+++CNLA+  S+                              +  D + RK+++ GLS++T++++L T+FSQ+GE+E+  V  D+ + KS+G+ FVTF+   +A  A+ +P K ++GR     +AAEG   +
Sbjct:   80 HRKLFVRGLAWETTSQALRDAFEQYGEIEEGAVITDKATGKSRGFGFITFKHMDSAQRALKEPSKNIDGRITVCNLASSGST-----------------------------TTATDQAQRKLYIGGLSYETSSDTLLTIFSQYGEIEEGAVAYDKNTNKSRGFAFVTFKTLEAAKRAMDDPNKNIEGRHVIVKLAAEGQKEK 252
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig13737.6052.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KMW4_9PHAE1.940e-11686.40Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FN41_ECTSI1.360e-11585.09Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A388KX58_CHABU3.240e-4946.04Uncharacterized protein n=1 Tax=Chara braunii TaxI... [more]
A0A2D4CE34_PYTIN5.870e-4748.87Uncharacterized protein n=2 Tax=Pythium insidiosum... [more]
A0A2K1L9M1_PHYPA5.060e-4642.51Uncharacterized protein n=2 Tax=Physcomitrium pate... [more]
A0A2K1JG53_PHYPA5.400e-4343.00Uncharacterized protein n=2 Tax=Physcomitrium pate... [more]
D8QPR6_SELML7.750e-4340.28Uncharacterized protein n=1 Tax=Selaginella moelle... [more]
A0A1Y1I415_KLENI8.080e-4344.88RNA binding domain protein n=1 Tax=Klebsormidium n... [more]
A0A067CRS6_SAPPC8.950e-4347.91Uncharacterized protein n=2 Tax=Saprolegnia TaxID=... [more]
A0A2R6X2I3_MARPO1.260e-4241.58Uncharacterized protein n=2 Tax=Marchantia polymor... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig13737contigM-pyrifera_M_contig13737:1674..6594 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeViridiplantae
Seed ortholog score133.7
Seed ortholog evalue1.4e-28
Seed eggNOG ortholog3218.PP1S59_30V6.1
KEGG koko:K12741
KEGG Pathwayko03040,map03040
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003730,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005849,GO:0006139,GO:0006378,GO:0006379,GO:0006396,GO:0006397,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016071,GO:0031123,GO:0031124,GO:0031974,GO:0031981,GO:0032991,GO:0034641,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043631,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044451,GO:0044464,GO:0046483,GO:0070013,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0097159,GO:1901360,GO:1901363
EggNOG free text desc.UBP1-associated protein 2C-like
EggNOG OGs37M3X@33090,3GFRS@35493,KOG0118@1,KOG0118@2759
Ec32 ortholog descriptionUncharacterized protein
Ec32 orthologEc-06_008310.1
COG Functional cat.A
Best tax levelStreptophyta
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03019,ko03041
Exons7
Model size2196
Cds size840
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815824.809425-UTR-M-pyrifera_M_contig13737:1673..17661622815824.809425-UTR-M-pyrifera_M_contig13737:1673..1766Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig13737 1674..1766 +
1692277590.460718-UTR-M-pyrifera_M_contig13737:1673..17661692277590.460718-UTR-M-pyrifera_M_contig13737:1673..1766Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig13737 1674..1766 +
1622815824.8240862-UTR-M-pyrifera_M_contig13737:3058..30701622815824.8240862-UTR-M-pyrifera_M_contig13737:3058..3070Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig13737 3059..3070 +
1692277590.4718468-UTR-M-pyrifera_M_contig13737:3058..30701692277590.4718468-UTR-M-pyrifera_M_contig13737:3058..3070Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig13737 3059..3070 +
1622815824.896432-UTR-M-pyrifera_M_contig13737:5343..65941622815824.896432-UTR-M-pyrifera_M_contig13737:5343..6594Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig13737 5344..6594 +
1692277590.5311558-UTR-M-pyrifera_M_contig13737:5343..65941692277590.5311558-UTR-M-pyrifera_M_contig13737:5343..6594Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig13737 5344..6594 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815824.8365233-CDS-M-pyrifera_M_contig13737:3070..31721622815824.8365233-CDS-M-pyrifera_M_contig13737:3070..3172Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig13737 3071..3172 +
1692277590.4797096-CDS-M-pyrifera_M_contig13737:3070..31721692277590.4797096-CDS-M-pyrifera_M_contig13737:3070..3172Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig13737 3071..3172 +
1622815824.848371-CDS-M-pyrifera_M_contig13737:3558..37401622815824.848371-CDS-M-pyrifera_M_contig13737:3558..3740Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig13737 3559..3740 +
1692277590.487967-CDS-M-pyrifera_M_contig13737:3558..37401692277590.487967-CDS-M-pyrifera_M_contig13737:3558..3740Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig13737 3559..3740 +
1622815824.8578043-CDS-M-pyrifera_M_contig13737:3895..40671622815824.8578043-CDS-M-pyrifera_M_contig13737:3895..4067Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig13737 3896..4067 +
1692277590.4994404-CDS-M-pyrifera_M_contig13737:3895..40671692277590.4994404-CDS-M-pyrifera_M_contig13737:3895..4067Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig13737 3896..4067 +
1622815824.867411-CDS-M-pyrifera_M_contig13737:4423..45531622815824.867411-CDS-M-pyrifera_M_contig13737:4423..4553Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig13737 4424..4553 +
1692277590.5074873-CDS-M-pyrifera_M_contig13737:4423..45531692277590.5074873-CDS-M-pyrifera_M_contig13737:4423..4553Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig13737 4424..4553 +
1622815824.876948-CDS-M-pyrifera_M_contig13737:4709..48471622815824.876948-CDS-M-pyrifera_M_contig13737:4709..4847Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig13737 4710..4847 +
1692277590.5151024-CDS-M-pyrifera_M_contig13737:4709..48471692277590.5151024-CDS-M-pyrifera_M_contig13737:4709..4847Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig13737 4710..4847 +
1622815824.8867488-CDS-M-pyrifera_M_contig13737:5227..53431622815824.8867488-CDS-M-pyrifera_M_contig13737:5227..5343Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig13737 5228..5343 +
1692277590.5233057-CDS-M-pyrifera_M_contig13737:5227..53431692277590.5233057-CDS-M-pyrifera_M_contig13737:5227..5343Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig13737 5228..5343 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig13737.6052.1prot_M-pyrifera_M_contig13737.6052.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig13737 3071..5343 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig13737.6052.1

>prot_M-pyrifera_M_contig13737.6052.1 ID=prot_M-pyrifera_M_contig13737.6052.1|Name=mRNA_M-pyrifera_M_contig13737.6052.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=280bp
MDKMTQKSKGYGFVTFKGMDGAHAALENPEKNIDGRVSLCNLAALRSSQP
LPQRGGAGAVQGGGMQGGTGMVGGGMGASGEDVSARKIFVRGLSWDTTTE
SLRTMFSQFGELEDAVVTTDRVSGKSKGYGFVTFRYAASASSAVAEPEKQ
LDGRLTHCNIAAEGASNRNKPQGFGAPQASQQWGMMGQQQQFQTQAGQGS
GQWGAGAAAGAAAGAGAGGAQAQGFGGQGQWGQQQQFGAQARGYVGGQNA
AAYGTNGAFPAGQATGGAGAWGGQQQQGY*
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mRNA from alignment at M-pyrifera_M_contig13737:1674..6594+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig13737.6052.1 ID=mRNA_M-pyrifera_M_contig13737.6052.1|Name=mRNA_M-pyrifera_M_contig13737.6052.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=4921bp|location=Sequence derived from alignment at M-pyrifera_M_contig13737:1674..6594+ (Macrocystis pyrifera P11B4 male)
GTCAACAAGAAGATTTTTGTCCGTGGCCTGCCGTGGGAGACGACCGACCA
ATCCCTTCGCGCCGTCTTCGAGCAGTACGGAGAGATTGCTGAGGTAAAGT
GGTGATGAGGGTGGATTGTATCCATGGGTATACTCGTGGTGTAAAGTGTC
AAGTGCGCATCCTACCACGTGACGTACTGGTCGGTACCTACATACATACA
AATCACACACACCTGGTATATACTGACACTGATTGCTCAGTTCCATTCTC
GGAGTTTGGACGGTATCATATGATAGCGGTATGTCAATGTGCAATTGGGA
AAGACATGAGCTACACAACCTTGATATATACTGTATACAACTAACGTACA
GAGAGCTTACGAGTAGCACGCCGAAAAGGTTTATCGTACATGGTCTTAAC
GCCACGTACAAAATTGAAACCATGTTCTTGGAAAGTTTGTTCAAACCAAA
CTTCGAAATACTACGTAAATGGCTCATGATCTAACGCGCGTTGGTGTTGC
TCATGCGGTATTGGATAGGATTTGTTCGAAGAACGCACAGTTTATAATTC
AGTTTAGGGCACAACGTTCCTTTGTTGTATCATGATTAGCGACGATGACT
TGTGACCATATGTTTCACTATTTAAACATGTACATGAGTAGCGTGTACTT
GAACACGTTACATACGTGGTGTGTACAAGTTCGAAAGCATCATGGACAAC
GAATTGTTTATTTGTTGTAACTACTCGTACACCTTAAAACATATCTGCTG
TACAATGTTGTTTACCTGGCACATGATCTCTTTTCGTTGGCAGCCTACAA
TGCACTAGCAGCAACCATGCCGTTTGCTTTCGCCGTCTCTCTTTGAATCG
GTTGTCGTTTATATGCATGTTGAAAGTCGGCGGCGGGTAGTTTTGTAGCG
CTGACTGATTATACGGTGCCCTGGTTCAAACGTATTTGATTTAGTTTCTC
CATCTCGATCTTGCTTTCGGCGTATAATAGGTTTGTACATGTGTATGAAG
ATATATGGAACTGTACATTGCTCCGAAATTCTGTCAGTTTTTGTTTCTGC
GAAGAATACGAGGAAATGTTGTGGCCATAAGGATGTACAGCAGCGAAAAT
GGCGCAAAGCTACAGTAGTCAGGGCGCGCGCGGCGAAAACGACATGGATT
GGTGGTTAGCCAATATGGGCTCGATGAGTGACTCATCAACGCTAGAAATA
AAGTACAAATAGTTTCGATCAAAGCACAGGTCAAGTACTTGGTATTGTGT
ACATTAGCTGTAAAACACTTTTCGCTTGGCGCACAAGTAAAGCGACAATG
GGTATGACGTGGTTAATGTTTGTAAGCAGAGGAGCTAACAACGCGTCGCC
TCTTCCCTCCGTTCAAATCTGCCGGATGAACTCAGGCAACTGTCGTGATG
GACAAAATGACGCAAAAATCTAAAGGATACGGCTTCGTCACGTTCAAGGG
AATGGACGGCGCTCACGCCGCGCTTGAAAACCCCGAGAAAAACATCGATG
TGAGTTTGTGACCACGTGCCGCCAAACGTTGTATTGATAGTACTCTTAGC
TCTTATCTACAAAAAGCTCGTCTTATAACGTTTCGTGCGTCACATAGGCG
GAGAGATTATTGTTGCGAATAAGATTGAGCTGAAGACGTGTCGTGTGTAA
TATTGGCGGAGAGACTATTGTTGCGAATCAGATTCACCTCGAGTGGAAAT
GTTGACGTCAATCGAAAGCAACCTTAAACAAAAAGTAGAACACTTGTCGG
TGCGTGGTTTGTAATGGACTACTGTTCCGTAGGTTTTTCGTTGTACTCAC
AGTTTGGTCGCAGTTTGCTTGATGTCCTTGTTTTTTGCGAACAAAACTGA
AAACTGTTGCATTGCTACTTTTCCGTTGCTTGTAGGGGCGGGTGAGTTTG
TGCAACCTGGCCGCCCTGCGTTCATCGCAGCCCTTGCCTCAAAGGGGCGG
AGCCGGTGCGGTTCAGGGCGGTGGTATGCAAGGAGGTACGGGCATGGTTG
GCGGCGGTATGGGAGCCTCGGGAGAGGACGTCAGTGCAAGGAAGATTTTC
GTCAGAGGACTCTCATGGTGAGGGCCAAAGAAGCTGCTTCGTGTATCAAC
GCAATGTTTTACAGTAAACCTGTCCTGAATTGGCCTGGCCATTCGTGGGA
CATTATATTTTCACCGCAATGAACACAAAAAAGTCAAAATTGAATTGTTT
CTCGTTGTCTCGTCTGCGGCAGGGACACCACAACGGAGTCTCTGCGCACG
ATGTTCTCTCAGTTCGGCGAACTTGAGGATGCCGTGGTGACAACAGACCG
CGTGTCGGGAAAATCCAAGGGTTACGGCTTCGTCACCTTCCGCTACGCTG
CCAGCGCTAGCTCTGCTGTTGCTGAGCCGGAGAAGCAGCTTGACGTGAGA
AACACTTTCGTTGTTCGTCTTTGCCCCCCGGTAGAACGCGAGCTGCTGTT
GATGAATGGCATGACAAAGGCCAGAGATTGCATCTTGGATGGAGAGTGCT
CACCTAATTTTATACCCGTACCAGATGTTGGTAGCTTTCACCATCAAAGT
GCACATGCCACCCTCGTGTGGCCGCAGAAAAAACCAGTCTGCCAACAAAA
CGGTGCCGCTTGTTGACTGTAGTTCTCTATCATTACGCGTTGATCCGCTG
ACCTGTCTATTTGTGCCCAGATCCAAGTTTTAACACGTGCGGTTTGCAAA
CTCTTTATCAACCGTTCGATACCTACGACGTTGCTCTGTTGCACGAACAG
GGCCGCCTGACGCACTGCAACATCGCTGCTGAGGGGGCGTCGAACAGAAA
CAAGCCTCAAGGCTTTGGTGCTCCCCAAGCTAGCCAGCAATGGGGCATGA
TGGGCCAGCAGCAGCAGTTCCAGACTCAAGGTAGGTGGGATTTTTCGCTG
ACTCTGTACATCTTGTCCCATCTTATGTTTCCATTGTTCTCATCTTTAAA
CGTTATCTTAAACCGACGACGTTTTCGGGGGTCGCACGCCAATCGTGTTA
TCTTGAACGAAGGTTCACCGCCCGAACGCGACTCAGCAGGTCAAGGCTCT
GGTCAGTGGGGTGCCGGTGCTGCTGCTGGTGCCGCTGCTGGTGCTGGTGC
TGGCGGTGCTCAAGCGCAGGGCTTCGGTGGCCAAGGACAATGGGGACAGC
AGCAGCAGTTTGGTGCCCAGGCGAGTTGCGCATTATGGTGGTTGAATACC
AAGACGTTGGCAGGGCAAGTCGTTGTGTCGGTCCGTTTATCTATACTCCC
CGTTTGTTTGGACTAATATACTCGTACAGTAGTTCATCTAGTGAACTGTG
ATGTTCACCACACCAGGTAGCTTCATTTTCTACCAATGCCTGGTCCTGGT
CCGGATCTGATTTGAATTTCCTTTTTAAAAAAGTGTATCGAGACCAGCGG
GACAGTGCGTGACCTTCACCATCTCACGGATGAAATGTATATCTCCACCC
TGCCACACGATAACACACAAGTCACGCCGTGGTGCCGGCAAAGCTTGTTT
GTTGACATGCTTTCGTTCTGACACGTACTCTCCAGGGTGGATACGGCAAT
GGAGGAGGGTACGTCGGTGGACAAAATGCGGCCGCGTATGGCACCAACGG
GGCTTTCCCCGCTGGCCAGGCTACTGGAGGAGCAGGCGCATGGGGAGGAC
AGCAACAGCAAGGATACTGACTTGGTCGCGTCGAAGAAAGTTGCATGTAG
GAAAAAGCATAACCTTAGTCACCATGAAACACCGCAAACCCTTCAAGGCA
AACCGATGAAATTAGAGGTTGCGTCTGCTAGCTGTCCTACTGTGTTATGT
CACCAAAACGGTGAGAGTTGACGTACGCGACCTTGCGAATCCGACTCGTC
GATGGTTGGGCTAAGATCGAGGGCCTGGTTTTGGGGCTAAGATCGAGGGG
CCTGGTTGTGGGCCGATCAACACCCCATCAAAATGGCCGCCTGAAACGGT
CTAGTTTCAAGTTGTCGATCGATCCCGCTATTTTCGGCATGCGTCTGAGG
GCGGCTGGAGCTCTTGAATCAGCCGCAATCGTATGGGGTGAGGGATAGTT
GCCTGATGGATCGAGCATTTTTTTGCCTGTAAAATATATTCACGGCACGT
ATTGATGTTCGTTATGTCCCCGAAGTATTGGTATTAATAGGAGCAACACA
GGGTGTTTTTGGTATATATATTGGAAAGAGGTTTCTCGCGGGGTCAACCC
ACCCAGTTCCAAGTGTGGTGCGGTCTATCTACAGTAGCATGTGGTCGTTC
CCCTCGTATTTGTGGCATTACCTTTTCGCCGAGAGGATCCCACGATCACT
GCAGTGAAATGTTGACTTATCACTGTGCGGTAGCCGACGGAACGCGAACG
CGGGCTTGTAGAAACCCTTTTCTCTCATCCATATCGAAAGCTTTCACGCA
ATCGCTTAAGGCTGCTCTTGGGAATTTTACGCTCGGGTATACAAGTGAAC
ATGCAAGTTGTACAACAGTCGAGTCTAATTTATTTAGCTTCTCGCTGTCT
TGATTGTTTTTTCCATGCATTGGATTAGGGCGTGTACAACGTAACGTAAC
GTGTATTCCTTTGTTTTTCAGCCACTTTTACTTGCACCGGCTGATCTGCA
TGAAGCATACGCTCGACAAGCTCTTGGATAGGCCGTGGCCACAGTTGCTT
AAGCCTCTCTTTTCCTCTACTCGCCTTTTTTGTGTTCTAGTTGCGTCGAG
TTCAGCAATCTCACAGCTCTTGCATAGTGGCCGAATTTGCCAACTCTCGC
TTTTCGCGTTTTGAATGATTCATACGAACCGCGTTGTCTTCTGGCAGGAT
TCTATTTCCACAGGGTTAGACCGTTGACATCGGAAACGCGAAGTTTGAAG
GTTTTCTTTCAAGAAGCAGCTAAAAACATTATCGTACCGCCGCTGTGGGA
AAAAAGTGAAAATATGTTAGA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig13737:1674..6594+

>mRNA_M-pyrifera_M_contig13737.6052.1 ID=mRNA_M-pyrifera_M_contig13737.6052.1|Name=mRNA_M-pyrifera_M_contig13737.6052.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1680bp|location=Sequence derived from alignment at M-pyrifera_M_contig13737:1674..6594+ (Macrocystis pyrifera P11B4 male)
ATGGACAAAATGACGCAAAAATCTAAAGGATACGGCTTCGTCACGTTCAA
GGGAATGGACGGCGCTCACGCCGCGCTTGAAAACCCCGAGAAAAACATCG
ATATGGACAAAATGACGCAAAAATCTAAAGGATACGGCTTCGTCACGTTC
AAGGGAATGGACGGCGCTCACGCCGCGCTTGAAAACCCCGAGAAAAACAT
CGATGGGCGGGTGAGTTTGTGCAACCTGGCCGCCCTGCGTTCATCGCAGC
CCTTGCCTCAAAGGGGCGGAGCCGGTGCGGTTCAGGGCGGTGGTATGCAA
GGAGGTACGGGCATGGTTGGCGGCGGTATGGGAGCCTCGGGAGAGGACGT
CAGTGCAAGGAAGATTTTCGTCAGAGGACTCTCATGGGGCGGGTGAGTTT
GTGCAACCTGGCCGCCCTGCGTTCATCGCAGCCCTTGCCTCAAAGGGGCG
GAGCCGGTGCGGTTCAGGGCGGTGGTATGCAAGGAGGTACGGGCATGGTT
GGCGGCGGTATGGGAGCCTCGGGAGAGGACGTCAGTGCAAGGAAGATTTT
CGTCAGAGGACTCTCATGGGACACCACAACGGAGTCTCTGCGCACGATGT
TCTCTCAGTTCGGCGAACTTGAGGATGCCGTGGTGACAACAGACCGCGTG
TCGGGAAAATCCAAGGGTTACGGCTTCGTCACCTTCCGCTACGCTGCCAG
CGCTAGCTCTGCTGTTGCTGAGCCGGAGAAGCAGCTTGACGGACACCACA
ACGGAGTCTCTGCGCACGATGTTCTCTCAGTTCGGCGAACTTGAGGATGC
CGTGGTGACAACAGACCGCGTGTCGGGAAAATCCAAGGGTTACGGCTTCG
TCACCTTCCGCTACGCTGCCAGCGCTAGCTCTGCTGTTGCTGAGCCGGAG
AAGCAGCTTGACGGCCGCCTGACGCACTGCAACATCGCTGCTGAGGGGGC
GTCGAACAGAAACAAGCCTCAAGGCTTTGGTGCTCCCCAAGCTAGCCAGC
AATGGGGCATGATGGGCCAGCAGCAGCAGTTCCAGACTCAAGGGCCGCCT
GACGCACTGCAACATCGCTGCTGAGGGGGCGTCGAACAGAAACAAGCCTC
AAGGCTTTGGTGCTCCCCAAGCTAGCCAGCAATGGGGCATGATGGGCCAG
CAGCAGCAGTTCCAGACTCAAGCAGGTCAAGGCTCTGGTCAGTGGGGTGC
CGGTGCTGCTGCTGGTGCCGCTGCTGGTGCTGGTGCTGGCGGTGCTCAAG
CGCAGGGCTTCGGTGGCCAAGGACAATGGGGACAGCAGCAGCAGTTTGGT
GCCCAGGCGACAGGTCAAGGCTCTGGTCAGTGGGGTGCCGGTGCTGCTGC
TGGTGCCGCTGCTGGTGCTGGTGCTGGCGGTGCTCAAGCGCAGGGCTTCG
GTGGCCAAGGACAATGGGGACAGCAGCAGCAGTTTGGTGCCCAGGCGAGA
GGGTACGTCGGTGGACAAAATGCGGCCGCGTATGGCACCAACGGGGCTTT
CCCCGCTGGCCAGGCTACTGGAGGAGCAGGCGCATGGGGAGGACAGCAAC
AGCAAGGATACTGAGAGGGTACGTCGGTGGACAAAATGCGGCCGCGTATG
GCACCAACGGGGCTTTCCCCGCTGGCCAGGCTACTGGAGGAGCAGGCGCA
TGGGGAGGACAGCAACAGCAAGGATACTGA
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