mRNA_M-pyrifera_M_contig1373.6047.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig1373.6047.1
Unique NamemRNA_M-pyrifera_M_contig1373.6047.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
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BLAST of mRNA_M-pyrifera_M_contig1373.6047.1 vs. uniprot
Match: D7FSC9_ECTSI (Putative transcriptional regulator n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FSC9_ECTSI)

HSP 1 Score: 528 bits (1360), Expect = 9.070e-184
Identity = 278/432 (64.35%), Postives = 324/432 (75.00%), Query Frame = 1 
Query:    1 QALIQRYGAVRPPSDDFDVSRGDRRLYAAALEVVVGSQCHVRPARLTWSLQRLVRNMRRADENNLEIVAERAVENMNTGSDGLPLVDRQSWEEDAMAAISLETFFPGALRGVDGDDKINAGFAALRELSSKWALAKSLGLAETDXXXXXXXXXXXXXXXXXXRVARPRHKMTKRAMRVLRHQERYGSYPGGRRDRRTSSGASSGT-----TSEESGCSGVLVTPTEIPAKGVFLISHPLAGLHSPGDIFHRSVVFLVHHDAEGSYGLVVNKDRGETLEEALSSDAVPVAPDALKRVLGNPVRTGGPVMSRLAWLHHHEEVGGVRLSEDAEHPVFFCGAMEKASELLGEGVAEPMDFSLLVGASSWLGGQLRGELDHGMWIMAKAPASVAFAGGKDLWRDMLEAMGGPYAEMSRVPHGHHWAQIGVKSSPSDW 1281
            +ALIQR+G VRPP  + D   GDRRLYAAALEVVVGS CHVRP RL WSLQRL+R +R AD+NNLE+VA+RA EN    ++G+PL DR  WE+DAM AISLE FFPGAL+GVDG DK+ AGFAA+RELSSKWALA+SLGL  T+                  +VA PR+  TKRA+RVLRHQER          R TS   S G      T       G +V PT  PAKGV+LISHPL+ L++P ++FHRSVV LV H   GSYGLVVNKD+GETLEEAL  DA+P+A DAL++VL NPVR GGPVMSRLAWLH H+EVGGV L+E AE PVFFCG MEKA+ELL +G A+P DFSL+VGAS+W  GQL+GEL+HG+WIMAKAPAS A AGG+D+WRDMLEAMGGPYA M+RVPHG  WA+ GVK SPSDW
Sbjct:   26 KALIQRHGIVRPPLTESDAIGGDRRLYAAALEVVVGSHCHVRPERLAWSLQRLIRTIRMADQNNLEVVADRAAENEAKEAEGVPLEDRTVWEQDAMVAISLEIFFPGALKGVDGADKVGAGFAAIRELSSKWALAESLGL--TEYLENNGQTSCVKRRRRKGKVAGPRNTTTKRALRVLRHQERXXXXXXXXXXRSTSP-LSPGRGFELDTRNSLARPGDVVEPTGTPAKGVYLISHPLSFLYAPEEMFHRSVVLLVDHSPLGSYGLVVNKDKGETLEEALCEDALPLASDALQQVLKNPVRVGGPVMSRLAWLHPHKEVGGVPLAEGAEKPVFFCGKMEKAAELLTKGAAKPADFSLVVGASAWDAGQLQGELNHGLWIMAKAPASFALAGGEDMWRDMLEAMGGPYAAMARVPHGRQWARTGVKISPSDW 454
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BLAST of mRNA_M-pyrifera_M_contig1373.6047.1 vs. uniprot
Match: A0A484DYD7_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DYD7_BRELC)

HSP 1 Score: 110 bits (275), Expect = 1.560e-23
Identity = 73/199 (36.68%), Postives = 104/199 (52.26%), Query Frame = 1 
Query:  658 TEIPAKGVFLISHPLAGLHSPGDIFHRSVVFLVHHDAEGSY-GLVVNKDRGETLEEALSSDAVPVAPDALKRVLG-NPVRTGGPVMSRLAW-LHHHEEVGGVRLSEDA----EHPVFFCGA-MEKASELLGEGVAEPMDFSLLVGASSWLGGQLRGELDHGMWIMAKAPASVAFAGGKDLWRDMLEAMGGPYAEMSRVP 1230
            TE    GVFL++HPL        IF RSVV L  H  +GS  G +VNK   +TL            P  + R    + V  GGPV++R A  +H   E GG R+   +    + P  F G  ++ A+  + +  AEP +   + G S+W  GQL+ EL  G WI  +AP S+A     +LW+D++E++GG YAEMS +P
Sbjct:  134 TENVVPGVFLLAHPLLD-----GIFSRSVVILTSHKIDGSTTGYIVNKVSKKTLGRMFQ------VPSRVTRAFATSSVHMGGPVVTRDAEVIHGRAEFGGQRVPTPSFPTTDDPSLFVGVDLDAAARAIYDETAEPTEIVFMSGKSTWSPGQLKSELKQGSWIAVQAPVSLALNARTELWQDLMESLGGEYAEMSCMP 321
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BLAST of mRNA_M-pyrifera_M_contig1373.6047.1 vs. uniprot
Match: A0A0P1AP23_PLAHL (Uncharacterized protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AP23_PLAHL)

HSP 1 Score: 108 bits (269), Expect = 1.030e-22
Identity = 69/197 (35.03%), Postives = 98/197 (49.75%), Query Frame = 1 
Query:  661 EIPAKGVFLISHPLAGLHSPGDIFHRSVVFLVHHDAEGSYGLVVNKDRGETLEEALSSDAVPVAPDALKRVLG-NPVRTGGPV-MSRLAWLHHHEEVGGVRLSED----AEHPVFFCGA-MEKASELLGEGVAEPMDFSLLVGASSWLGGQLRGELDHGMWIMAKAPASVAFAGGKDLWRDMLEAMGGPYAEMSRVP 1230
            E  A G+FL++HP+        IF RSVV L  H  EGS G +VNK   + L            P  + R    + V  GGPV M     LH   + GG RLS      A+ P  F G  ++ A+  + +  A+  D   + G S+W  GQL  E+  G WI   AP ++A     +LW+D+++++GG YAEMS +P
Sbjct:  135 ENAASGMFLLAHPVLN-----GIFSRSVVILTEHTPEGSKGFIVNKVMEKPLGRVFQ------VPSRVTRAFATSTVHKGGPVSMKNAEVLHGRADFGGQRLSTSNFPMADDPSLFVGVDLDAAARAIYDETAKQTDLVFISGMSTWSSGQLDTEIKQGSWITVNAPVTLALNARAELWQDLMQSLGGEYAEMSCMP 320
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BLAST of mRNA_M-pyrifera_M_contig1373.6047.1 vs. uniprot
Match: A0A317IID9_9BACT (UPF0301 protein C5B52_12015 n=1 Tax=Bacteroidetes bacterium TaxID=1898104 RepID=A0A317IID9_9BACT)

HSP 1 Score: 94.7 bits (234), Expect = 3.690e-19
Identity = 67/192 (34.90%), Postives = 96/192 (50.00%), Query Frame = 1 
Query:  667 PAKGVFLISHPLAGLHSPGDIFHRSVVFLVHHDAEGSYGLVVNKDRGETLEEALSSDAVPVAPDALKRVLGNPVRTGGPV-MSRLAWLHHHEEV--GGVRLSEDAEHPVFFCGAMEKASELLGEGVAEPMDFSLLVGASSWLGGQLRGELDHGMWIMAKAPASVAFAGG-KDLWRDMLEAMGGPYAEMSRVP 1230
            P  G+ LI+ P   L  P   F R+VV L  H AEGS+G V+N+D   TL+E      VP   D     +  PV  GGPV M  L +LH   ++  GG  + +     +F+ G  E A +LL     +P      +G S W GGQL+ EL+   W+ A+A   + F    +++W+D L+ +GG Y  M   P
Sbjct:    4 PGPGILLIAEPF--LKDPN--FMRTVVLLCEHQAEGSFGFVLNRDFKHTLDEL-----VPELED-----IKLPVFYGGPVQMDTLHFLHQCPDLIPGGFEIIDG----IFWGGDFETAVDLLKNNEIDPAKIRFYIGYSGWSGGQLKDELNEKSWLTAEATKPLVFHRKLEEIWKDSLKLLGGDYEMMVNFP 177
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BLAST of mRNA_M-pyrifera_M_contig1373.6047.1 vs. uniprot
Match: UPI001E4C871B (YqgE/AlgH family protein n=1 Tax=Ferruginibacter lapsinanis TaxID=563172 RepID=UPI001E4C871B)

HSP 1 Score: 90.9 bits (224), Expect = 8.900e-18
Identity = 62/191 (32.46%), Postives = 95/191 (49.74%), Query Frame = 1 
Query:  667 PAKGVFLISHPLAGLHSPGDIFHRSVVFLVHHDAEGSYGLVVNKDRGETLEEALSS-DAVPVAPDALKRVLGNPVRTGGPV-MSRLAWLHHHEEVGGVRLSEDAEHPVFFCGAMEKASELLGEGVAEPMDFSLLVGASSWLGGQLRGELDHGMWIMAKAPASVAF-AGGKDLWRDMLEAMGGPYAEMSRVP 1230
            PA G+ LI+ P   L  P   F R+VVF+  H+AEGS+G V+NK    TL+E ++S +  PV           PV  GGPV M  + +LH + +   +  S++    V++ G  E  +EL+     +       +G S W  GQL  EL    W+   A  ++ F    +++W+D L+ +GG Y  M   P
Sbjct:    4 PAAGILLIADPF--LKDPN--FMRTVVFMCEHNAEGSFGFVLNKQFDYTLDELITSFEGYPV-----------PVYYGGPVDMDTIHFLHQYPDK--IPDSQEVMKGVYWGGNFETLTELVKNNEIDFSKIRFFIGYSGWGKGQLNNELSEKTWLTVSAKRNIVFHENPQEVWKDSLKHLGGDYEMMVNFP 177
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BLAST of mRNA_M-pyrifera_M_contig1373.6047.1 vs. uniprot
Match: A0A7M1T5M9_9BACT (UPF0301 protein IMW88_06670 n=1 Tax=Thermoflavifilum sp. TaxID=1968839 RepID=A0A7M1T5M9_9BACT)

HSP 1 Score: 89.4 bits (220), Expect = 3.160e-17
Identity = 60/193 (31.09%), Postives = 95/193 (49.22%), Query Frame = 1 
Query:  664 IPAKGVFLISHPLAGLHSPGDIFHRSVVFLVHHDAEGSYGLVVNKDRGETLEEAL--SSDAVPVAPDALKRVLGNPVRTGGPV-MSRLAWLHHHEEVGGVRLSEDAEHPVFFCGAMEKASELLGEGVAEPMDFSLLVGASSWLGGQLRGELDHGMWIMAKAPASVAFAGGKD-LWRDMLEAMGGPYAEMSRVP 1230
            +PA G FLI+ P   L  P   F R+VV L  H AEGS+G V+N+   +TL E L  + D  P+           P+  GGPV +  + ++H + +V  +    +    +++ G  E+  EL+  GV +       +G S W  GQL  EL+   WI++ A   + F   ++ +W+  L  +G  YA M+  P
Sbjct:    2 VPANGTFLIADPF--LKDPN--FARTVVLLCEHQAEGSFGFVINRPFEQTLNELLPGTEDLQPI-----------PLYFGGPVQLDTVHFIHQYPDV--IEDGYEVGEGIYWGGNFEQTLELIRIGVIDLKKIKFFIGYSGWGSGQLEAELEEHSWIVSPAHPELIFDTRQETVWKQSLRELGDEYALMANFP 177
[Close]
BLAST of mRNA_M-pyrifera_M_contig1373.6047.1 vs. uniprot
Match: UPI0018ECF617 (YqgE/AlgH family protein n=2 Tax=Hymenobacteraceae TaxID=1853232 RepID=UPI0018ECF617)

HSP 1 Score: 89.4 bits (220), Expect = 3.640e-17
Identity = 68/192 (35.42%), Postives = 94/192 (48.96%), Query Frame = 1 
Query:  667 PAKGVFLISHPLAGLHSPGDIFHRSVVFLVHH-DAEGSYGLVVNKDRGETLEEALSSDAVPVAPDALKRVLGNPVRTGGPVM-SRLAWLHHHEEVG-GVRLSEDAEHPVFFCGAMEKASELLGEGVAEPMDFSLLVGASSWLGGQLRGELDHGMWIMAKAPASVAFAGGKD-LWRDMLEAMGGPYAEMSRVP 1230
            P  G  LIS P  G   P   F RSVV L +H +AEG++GLV+NK     L +   SD V +  D     LG     GGPV  + L +LH   ++   V+L ED    +++ G  E    ++G G+    D    +G S W  GQL+ E+D  +WI+     +  F    D LWR +L  MGG Y  +S  P
Sbjct:    9 PQSGSILISEPYQG--DPN--FERSVVLLCNHNEAEGTFGLVLNK-----LSDMKLSDVVDIYNDTFDVTLG----IGGPVQFNTLHYLHRIPDLPQAVKLGED----LYWGGDFEMLRTMIGSGLVTSDDVRFFLGYSGWTAGQLQEEIDKNVWIVNNNAVNKLFNLEADTLWRSILRQMGGKYKVLSNYP 183
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BLAST of mRNA_M-pyrifera_M_contig1373.6047.1 vs. uniprot
Match: A0A4V1UQ20_9BACT (UPF0301 protein EOO01_34085 n=1 Tax=Chitinophagaceae bacterium TaxID=1869212 RepID=A0A4V1UQ20_9BACT)

HSP 1 Score: 88.6 bits (218), Expect = 5.960e-17
Identity = 62/194 (31.96%), Postives = 98/194 (50.52%), Query Frame = 1 
Query:  667 PAKGVFLISHPLAGLHSPGDIFHRSVVFLVHHDAEGSYGLVVNKDRGETLEEALSSDAVPVAPDALKRVLGN---PVRTGGPV-MSRLAWLHHH-EEVGGVRLSEDAEHPVFFCGAMEKASELLGEGVAEPMDFSLLVGASSWLGGQLRGELDHGMWIMAKAPASVAFAGGKD-LWRDMLEAMGGPYAEMSRVP 1230
            PA G  LI+ P   L  P   F R+VVF+  H  +GS+G V+N+  G TL+E ++              +G+   PV  GGPV M  + +LH + EE+ G   S +  + +++ G  E A +LL +G  +       +G S W  GQL  EL+   W+  +A   + F    D LW++ ++++GG Y+ M   P
Sbjct:    4 PAPGTLLIAEPF--LKDPN--FSRTVVFICDHHEQGSFGFVLNRSYGHTLDELMND-------------MGDMKIPVFYGGPVQMDTIHFLHQYPEEIAG---SYEIMNGIYWGGDFELAIDLLRKGQIDLARIRFFIGYSGWSEGQLSEELNQKSWLTLEANRKLVFFKDVDELWKEAVKSLGGDYSMMINFP 177
[Close]
BLAST of mRNA_M-pyrifera_M_contig1373.6047.1 vs. uniprot
Match: G8TCS0_NIAKG (UPF0301 protein Niako_7310 n=7 Tax=Niastella TaxID=354354 RepID=G8TCS0_NIAKG)

HSP 1 Score: 87.8 bits (216), Expect = 1.120e-16
Identity = 64/190 (33.68%), Postives = 93/190 (48.95%), Query Frame = 1 
Query:  667 PAKGVFLISHPLAGLHSPGDIFHRSVVFLVHHDAEGSYGLVVNKDRGETLEEALSSDAVPVAPDALKRVLGNPVRTGGPV-MSRLAWLHHHEEVGGVRLSEDAEHPVFFCGAMEKASELLGEGVAEPMDFSLLVGASSWLGGQLRGELDHGMWIMAKAPASVAFAGGKD-LWRDMLEAMGGPYAEMSRVP 1230
            P  G+ LI+ P   L  P   F R+VVFL  H  EGS+G V+N+  G TL E L +D      D LK     PV  GGPV M  + +LH + ++  +  S +    +++ G  E A  L+  G  +       +G S W  GQL  EL    W+ A+A   + F    D +W++ L+ +GG Y  M+  P
Sbjct:    4 PGPGILLIAEPF--LKDPN--FSRTVVFLCDHQDEGSFGFVINRVFGHTLNE-LMNDL-----DELKL----PVFYGGPVQMDTIHFLHQYPDL--IPGSYEVLDGIYWGGDFETAITLIKAGSIDTTKIRFFIGYSGWGSGQLNDELKEKSWLTAQATRKLVFHRKADEIWKESLKHLGGDYEMMANFP 177
[Close]
BLAST of mRNA_M-pyrifera_M_contig1373.6047.1 vs. uniprot
Match: A0A1I7N5P6_9BACT (UPF0301 protein SAMN05660895_0671 n=2 Tax=Thermoflavifilum TaxID=1649506 RepID=A0A1I7N5P6_9BACT)

HSP 1 Score: 87.4 bits (215), Expect = 1.540e-16
Identity = 61/190 (32.11%), Postives = 94/190 (49.47%), Query Frame = 1 
Query:  667 PAKGVFLISHPLAGLHSPGDIFHRSVVFLVHHDAEGSYGLVVNKDRGETLEEALSSDAVPVAPDALKRVLGNPVRTGGPVM-SRLAWLHHHEEVGGVRLSEDAEHPVFFCGAMEKASELLGEGVAEPMDFSLLVGASSWLGGQLRGELDHGMWIMAKAPASVAFAGGKD-LWRDMLEAMGGPYAEMSRVP 1230
            PA G FLI+ P   L  P   F R+VV L  H AEGS+G V+N+   E+L E L        PDA   +   P+  GGPV    + ++H + E+  +  S +    +++ G  E+  EL+  G+ +       +G S W  GQL  EL+   WI++ A   + F   ++ +W+  L  +G  YA M+  P
Sbjct:    3 PASGTFLIADPF--LKDPH--FARTVVLLCEHQAEGSFGFVINRPFQESLNELL--------PDAAD-MQSIPLYFGGPVQPDTVHFIHQYPEL--IENSYEVGEGIYWGGNFEQTLELIQMGLIDLRKIKFFIGYSGWGEGQLEAELEEHSWIVSPAHPELVFHRQEERIWQQSLRELGDEYALMANFP 177
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig1373.6047.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FSC9_ECTSI9.070e-18464.35Putative transcriptional regulator n=2 Tax=Ectocar... [more]
A0A484DYD7_BRELC1.560e-2336.68Uncharacterized protein n=1 Tax=Bremia lactucae Ta... [more]
A0A0P1AP23_PLAHL1.030e-2235.03Uncharacterized protein n=1 Tax=Plasmopara halsted... [more]
A0A317IID9_9BACT3.690e-1934.90UPF0301 protein C5B52_12015 n=1 Tax=Bacteroidetes ... [more]
UPI001E4C871B8.900e-1832.46YqgE/AlgH family protein n=1 Tax=Ferruginibacter l... [more]
A0A7M1T5M9_9BACT3.160e-1731.09UPF0301 protein IMW88_06670 n=1 Tax=Thermoflavifil... [more]
UPI0018ECF6173.640e-1735.42YqgE/AlgH family protein n=2 Tax=Hymenobacteraceae... [more]
A0A4V1UQ20_9BACT5.960e-1731.96UPF0301 protein EOO01_34085 n=1 Tax=Chitinophagace... [more]
G8TCS0_NIAKG1.120e-1633.68UPF0301 protein Niako_7310 n=7 Tax=Niastella TaxID... [more]
A0A1I7N5P6_9BACT1.540e-1632.11UPF0301 protein SAMN05660895_0671 n=2 Tax=Thermofl... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig1373contigM-pyrifera_M_contig1373:19289..26114 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score530.0
Seed ortholog evalue1e-147
Seed eggNOG ortholog2880.D7FSC9
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Uncharacterized ACR, COG1678
EggNOG OGs2QV60@2759,COG1678@1
Ec32 ortholog descriptionProtein of unknown function UPF0301
Ec32 orthologEc-20_005040.1
COG Functional cat.K
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons7
Model size1287
Cds size1287
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815824.357659-CDS-M-pyrifera_M_contig1373:19288..194411622815824.357659-CDS-M-pyrifera_M_contig1373:19288..19441Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1373 19289..19441 -
1692277590.1929216-CDS-M-pyrifera_M_contig1373:19288..194411692277590.1929216-CDS-M-pyrifera_M_contig1373:19288..19441Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1373 19289..19441 -
1622815824.3713555-CDS-M-pyrifera_M_contig1373:20434..204851622815824.3713555-CDS-M-pyrifera_M_contig1373:20434..20485Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1373 20435..20485 -
1692277590.2053123-CDS-M-pyrifera_M_contig1373:20434..204851692277590.2053123-CDS-M-pyrifera_M_contig1373:20434..20485Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1373 20435..20485 -
1622815824.4188764-CDS-M-pyrifera_M_contig1373:21349..214511622815824.4188764-CDS-M-pyrifera_M_contig1373:21349..21451Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1373 21350..21451 -
1692277590.2140243-CDS-M-pyrifera_M_contig1373:21349..214511692277590.2140243-CDS-M-pyrifera_M_contig1373:21349..21451Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1373 21350..21451 -
1622815824.4303436-CDS-M-pyrifera_M_contig1373:23040..235111622815824.4303436-CDS-M-pyrifera_M_contig1373:23040..23511Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1373 23041..23511 -
1692277590.2238302-CDS-M-pyrifera_M_contig1373:23040..235111692277590.2238302-CDS-M-pyrifera_M_contig1373:23040..23511Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1373 23041..23511 -
1622815824.442182-CDS-M-pyrifera_M_contig1373:24007..241561622815824.442182-CDS-M-pyrifera_M_contig1373:24007..24156Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1373 24008..24156 -
1692277590.236159-CDS-M-pyrifera_M_contig1373:24007..241561692277590.236159-CDS-M-pyrifera_M_contig1373:24007..24156Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1373 24008..24156 -
1622815824.4537919-CDS-M-pyrifera_M_contig1373:24827..250631622815824.4537919-CDS-M-pyrifera_M_contig1373:24827..25063Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1373 24828..25063 -
1692277590.2471347-CDS-M-pyrifera_M_contig1373:24827..250631692277590.2471347-CDS-M-pyrifera_M_contig1373:24827..25063Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1373 24828..25063 -
1622815824.4674532-CDS-M-pyrifera_M_contig1373:25989..261141622815824.4674532-CDS-M-pyrifera_M_contig1373:25989..26114Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1373 25990..26114 -
1692277590.255281-CDS-M-pyrifera_M_contig1373:25989..261141692277590.255281-CDS-M-pyrifera_M_contig1373:25989..26114Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1373 25990..26114 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig1373.6047.1prot_M-pyrifera_M_contig1373.6047.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig1373 19289..26114 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig1373.6047.1

>prot_M-pyrifera_M_contig1373.6047.1 ID=prot_M-pyrifera_M_contig1373.6047.1|Name=mRNA_M-pyrifera_M_contig1373.6047.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=429bp
QALIQRYGAVRPPSDDFDVSRGDRRLYAAALEVVVGSQCHVRPARLTWSL
QRLVRNMRRADENNLEIVAERAVENMNTGSDGLPLVDRQSWEEDAMAAIS
LETFFPGALRGVDGDDKINAGFAALRELSSKWALAKSLGLAETDDDDDSS
HDGTVARKRRRRRVARPRHKMTKRAMRVLRHQERYGSYPGGRRDRRTSSG
ASSGTTSEESGCSGVLVTPTEIPAKGVFLISHPLAGLHSPGDIFHRSVVF
LVHHDAEGSYGLVVNKDRGETLEEALSSDAVPVAPDALKRVLGNPVRTGG
PVMSRLAWLHHHEEVGGVRLSEDAEHPVFFCGAMEKASELLGEGVAEPMD
FSLLVGASSWLGGQLRGELDHGMWIMAKAPASVAFAGGKDLWRDMLEAMG
GPYAEMSRVPHGHHWAQIGVKSSPSDWS*
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mRNA from alignment at M-pyrifera_M_contig1373:19289..26114-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig1373.6047.1 ID=mRNA_M-pyrifera_M_contig1373.6047.1|Name=mRNA_M-pyrifera_M_contig1373.6047.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=6826bp|location=Sequence derived from alignment at M-pyrifera_M_contig1373:19289..26114- (Macrocystis pyrifera P11B4 male)
CAGGCTCTGATTCAGCGGTACGGTGCGGTGAGACCACCGTCCGACGACTT
CGACGTGAGTCGGGGAGATCGCCGCTTATACGCCGCGGCATTGGAAGTCG
TCGTCGGCAGTCAATGCCATGTCAGGTCAGTCCTGCCATGAAAGCAGCCT
GCATCAGTAACGGGGTGCATGAGAGCAGTACGTCAGCTCTGTTATCCGTG
ACCCAACATTTAATCCTGTTGATTAACACCGTTGATTGACAATCGTTGAA
AGGATGATACGTCCCGTGGTGCGTTCTTCAAATAAGGTGTTTACTGGTGC
GTTTCTTTCGGTTCGTGCACCGTGTTTGTTCGCCATGAATCGCCCGACGT
TGTTTGACTGGTTTCTGCTTGGGAGGCTCTACTCAGAGAAGAGCCGGCCG
TCTGTCTGTCTGTCTGGTGTACCACTGCTTCCGCAATATAGTTGGGTTGC
GTAGTCAACATCAAGCATCATACCACTACATCCACTACAAGCTAATGAAA
TTCATTTTTAACAGCGTCAGTACTACAACATAATGGTATTCATTTTAACA
CAGCGGCAGTAGTTACGGTCAGCTCTACTGCTGTACGAGTACACTATTAA
AAGAATCATATGAGTATCATATCGATAGGTGTGTGCGAGGTGCGGCTCGA
TGTAATACCTATTGTAGTTCCGAACTGGTTGAGTATGTGCGCGCTGTCGA
GGAAAAACGTTCGGCTCTTTCGTCGGCGGCGACCTAGGCTAAGGAACAGC
GTCTCGGTGTTTTCGGCAGCTCGTTGCTGCCGTGTTGCCGTATTTAGCGT
GTTGGCTACCGTGGTACTACCGTGATACTACCGTGCTGCCCTACCATATT
GCCGTATCACCGTGTTACCCTATACTCGTAGCCGCATCACGTTGTTGCTC
TGGCGGCATGTAAACAACGACCATCCACGGGGTCTCCCCTGTGCTTCGTT
GGCCTGCTCTGATTGGCTGACTGACTCACTAGCTGTGCGCCACTGCTTTT
ACGTACCAGTACCAAGTATGGGCGCTTTTTGTTCTGTCTCGCGCCCTCCA
GGCCGGCACGGCTCACGTGGTCCCTCCAACGGCTCGTCCGCAACATGCGC
CGCGCGGACGAAAACAATCTGGAGATAGTCGCAGAGAGGGCGGTGGAGAA
CATGAACACCGGCAGCGATGGCTTGCCCCTTGTGGACAGACAGTCGTGGG
AGGAAGATGCGATGGCCGCGATTTCTCTGGAAACGTTCTTTCCCGGGGCG
TTGAGAGGCGTTGATGGAGATGACAAGATTAATGCAGGTGATCCCTTCAA
GCTCTAAGCGGACGGGGCGCGAAAATTTTCATGGATGGGACAGATCACGA
TCTAGATAGGCTAGATAATCCACGGCAGTAGACGTTGTAGTTGATCAGAT
GATATGTTGTGTGAGAGCCTCACTATTCAGATCCCACTTGGCAAAAACAT
GATCTACTATATTGTACAGGTTTTATATTATATATCAGGAGTCTCTGCAC
CGAAATAACTACTGTAGATGATCTAGATCATCAAATGGTGATATATCTGA
TATATGTGATCTACATGATCTATGTGATCTGCGTCATGTGTATGATGTGT
GAAGAGGTTTGTGTGACAGGTTTCCTTCAAGTGGGCGTTGGAATTGGACG
GGGTCGCAGGGATTTGCAGTCGGCAAATGCATGGGCAGAGCGGTGCGCTT
GTGGACCCTCGAAAGGAATGCGATGTTCGACCTTGGTGTCTTGCTAAGAA
ATGCCCCAACATGTTAATACTTTTTTTCTCGAAATAGAGGCAATTTGTTA
TGTACCAGGTATACGTGTAGCGTTTGTGTTGAATGGTCAGATATGGTGAC
CGTAGTTCCCGCACAGGCGTGGCAAAGCAGCGCCATATATTTCGCTGCTG
GTTTTTTTCTGTTTTCGACAAGAGGAGGGTTTCCATGTGCACATGTTTTT
TGCCGCAGGGTTTGCAGCCCTCCGAGAGCTTTCGTCCAAGTGGGCGCTGG
CAAAATCCTTAGGGCTGGCAGAGACAGACGACGATGATGATTCCAGTCAT
GATGGCACGGTTGCCAGGAAAAGGAGAAGAAGGAGAGTCGCACGCCCTAG
ACACAAGGTACTTACCAGGGGACTTCGCTCTTTTTCCCCTCTCCCCGCAT
TTCTTATTACCTCTCTTTCTCGGGCTTGTTGGCATCCGTGCTGTTTTGTG
GCCGTTCGAAAGATATGGCGAATGACGTCAGCCGGGAGCGACGTCATTGG
TTGGTCGAATTCCGCCGCCTCGCGTTGCAGGATAGGAACGCATCGACCGC
CTGTTCTTCAAGTGTTTATTTGCTGCTCTCCTGATCTGCCGTGTTTCTTA
TTTTTTTGTTGCAACTGGGCTGGGATCAATCAAACGCAGAGAGTATCTCA
CAGGCAATCCAACGGGCAGATGGCACCCTACTGTTTCGATCAACCCCGCT
TGGGCTCAACCGTCCTTTGGTCATGAAGGAAAAACTGGCCCGTTCGTTTT
CTTCCCGTCTCTGCGGGCGGTATCCTATCCAGTTTACGGTAACTCAAGCA
ATCTAAACCCACTGTTGTATCCATGCACCCTGATGATGAAAACGCCTTTC
AAGATGACGAAGCGGGCGATGAGAGTGCTGCGGCATCAGGAGCGATACGG
AAGCTACCCCGGGGGCAGGCGCGACCGTCGAACGTCATCGGGGGCCTCAA
GCGGAACCACTTCCGAGGAGTCCGGGTGCTCGGGGGTACTGGTGACGCCC
ACGGAGATCCCAGCGAAGGGGGTGTTCCTGATATCACACCCGCTGGCAGG
GCTTCATTCCCCGGGGGACATTTTTCACCGATCGGTTGTGTTTTTAGTGC
ATCACGACGCGGAGGGATCGTACGGGCTGGTGGTCAACAAGGACAGGGGG
GAGACTTTGGAGGAGGCGCTGAGCAGTGACGCTGTACCTGTGGCGCCGGA
CGCGCTAAAGCGAGTCCTCGGCAACCCGGTTCGAACCGGGGGTCCGGTGA
TGTCGCGCCTGGCGTGGCTGCATCACCACGAGGAGGTCGGAGGGGTGCGG
CTTTCGGAGGACGCGGAGCACCCGGTGAGAAACCAAGCGAAGGCTGTAAG
GGGTGTGCCGGATCCACATGTACATGAAAGTGGCAGACCTATGGGACGTG
GACTTATAGTTGCCCTGGCCCAACTACAGTAGTTCACCGAGTGTATTGTT
GGTTCTTGACATTAAGCGGGTATTTCAGGGCTCTTCATGGGTCATGACTC
GAAGTCGGGTTGAAAAGTAACGAACTCTAACGGGTCGAGCCGGGTCGGGT
CGGGTCGGGTCGGGTCGAGTCAGGAGGTTTTCAAATTCTCACGGATCGGG
TCCGGTCGGTCACCGTTACCCGACCTGGCCCGACTCGACCCAGCCCGCGA
GGTTTGACCCGACCCGTGAACAGCCCTGCTACTTTGTATTAATACCGATC
GACATCAAGCACATGCATCGAGTGTACGTTCTGATTCTTCGCCGTAGAGA
GATACCAGCTGCAGCATGTGCTCATAAACCACGAGACAGGTATTACATAG
GATGCGGCGGATGCATATATATATGTGTATGTATATATGCATGTATGCAT
GTATGTGTATGTGACATATGACCGGCCTTTGGTACCTGTGGTTGCCTTGG
TCCGCCCGAATCTCTGAGAGTTGTGAGTTGAGGGAATGTCGAGAACATCT
TGTTTCGTTGGGGGAGTTTCGGGGATAGTTTTTGTTGGAGAAAATCCGGA
ATATTTTGTGAGAACGTAAAGGGAACATTTTTTTTTTCTTTTTGAGATTT
AGTAGTATTGGCCGTGGAAATTGGGCACTAGGCGGCAAGCCCCTTCGCCT
AGGGGGGGGTGTACTCGATAGGAGAGATGTGCTCGATGTCATGCATGGCC
ATAGTCGTATGGCCTTAAACCCTCGCATCCCTAAAATACCGGGACGGAGC
ATGTCGGGTTTTCACCGACCAGGCAGACATTGCTTGCACCAAGCGGAAGC
GAAACGTGAGGTGTCCGGCGGGTCGCATGAAGGGTGAGCTGCATCCTACT
AAGGACCACTTGTGAGGCGGACTTGCATATGCATGGCAGCTTCAATGAGT
TAATTTCTATTTCCGGTGTAGCCACTTCCAGAGAGCAATGAGAGTACTAT
GTGACTGCCTCTTGGGTGCCTTAACATTAACACTACGTGATACGATCACT
CCCCTTGTGCGGAGTAAAGGCTCTTCACGTCGTACAAATGATCTAGCTCG
ACCACCAGCTGTGACCGACCGCCAAAAAAAGAAGAAGAAAATGGCGGTAC
CCTGGTTGTCTAGCTCAAAAGCGGTGAGCGACATGAGGTACTGCTGTGTC
GTTTCCAACCAACGCCTACCCGACCTATATAAAATTGGGGCGGGGGGGGA
CACTTCGCCTAAGGGGGGCATATCTAGGATTGCGCGTGTGCGCTTTCCTT
CCTGTTGTGACGATGCTTTGTCCCTGGTGCCAAGGCCCTAACCCTAAACA
GGTGCCAAGTATGTCGAATGCTATCATACTCGGGACGGTATGTATGACGC
TTGGACATTTGCATGAGATGTTCAGAGTGGCTGTCTCACCTGTTTTCATA
GCAGCCACCGGTGCTTAGGTGATGTCCTGTGCTGAAATGTTTTCTTCGTT
TTTGACATGCCAGGTGTTCTTTTGCGGGGCGATGGAAAAGGCGTCCGAGC
TGCTGGGCGAGGGTGTCGCCGAACCCATGGACTTTTCCTTGCTAGTTGGC
GCATCATCGTGGTTGGTGAGCCTATTTAATCCTGTCCGTACTGCACCCCA
CTGTGCACGCACCCAAATTTCACTCTAATTCCAAGTCTTCTGTTCCCACG
ACGGGAGTGCAGTCGTAACCCTAAGTCGATAGATCGCTTTTTGCACATTG
TCTTGCACTCAGTGTTTCTTGAAGCATGTGCTTGTGAATCTTCTCGAGAT
GATTTGTTTGGCACACGCTCGCCTCGCGCCAGTTTGATCGCTGAGCATTC
GCTGGAATCCATTGCTACCTTAGGAAGGGCTTTGGAGATATTATCCACTG
ATAGCTGGTGCTGGTGCTTCGGTTGCCGAGCGTTTTTCTCTTCCTGTTAA
TAGCTGGACGTTCCCGCCTTTTTGTCTGGGCTGAATACCCTGCAGCAGCT
GGCTGCCGATAGCCAAAACTTGCTATTGATGCTGCATTCTGCCTGCACAG
AGTTGAACCATTTGACTTTATTATGCAATTTTTTAATCATGTGTTCTGTT
CTGCATTTATAGAGTATATAAGCTGCGCTTGTAGTGTAATTTTGTTTTGT
TTTTCCGTCCCGTCCCATTTATCTTCGCCCGCCGTTTGTCTTTCCCTCGT
ATTTTGTAGGCGGTGTACTGTATGTTGCGCATTATATTTGTATTGTTATG
TGCTCTGCTGCCTTGTGGTGTTGTTCTGTGGCTTACCGTATGTATTTGCC
GTTAACGCTGCTCGTGGTATGCCTGTCATGCCTCGTGTAAATAAGGTCCA
TCGACGGGCGATCCATCAATTAAGTCTAAAGCCCTCTGTCCCATCGCTCC
CTTGCGCATCCGCCCATGCCCCTGAACCGGTTTCTTTGAATCGTTTGCAA
TGCACCGTTTCGTCCGCCTCCTGGTGAAGGGTGGCCAGTTGCGAGGCGAG
CTCGACCACGGCATGTGGATTATGGCCAAGGTAATAAATAAGTGCTGTCA
GTTGTACGTTCAACAGTGCTGTCGGTAGTATATGTTCGGTAGTGCTGTCG
GTAGATGTTTGGTGGTGCTGTCGGTGGTACAATTTGAGTAGTGCTGTCGG
TAATATGGGTTCAGTACTTCTGTCACGTAGAGGTTCGGTAGTGCTGTGGG
TAAAGGCTCGGTACTTGAGCCGGTAGAGTTTCAATGGTGATGTCGGTAGA
TGTTCAGCAGTGATGTCGGTTGAAGTTCAGCAGTACACTCGATAGTACAG
GTTCCGTAGTGCTGTGGGTGAATGTTCGTAGGTGTTGTGGATAGAGGTTC
AATAGTGCTGTTGGTCGATGTTGGGTAGTGTCGTCGGTAGATGTCCAGTA
GTGCTGTCGGTAGATGTCCAGTGTGCTATCTCTAGATGTTAAGTAGTGCT
GCCGGTAGAGGTCAAGTGATGATGTCTGTATATAGATATTCAGTAGTGCT
GTCGGTAGAAGTTCATAAGTACTCTGAAGATAGACTCGGTATCGTAGTGC
TGCTGATATTGTTCGGTATTGCTGTCGGTAGACTCTCAGTAGTAGTAACG
TTTCGGTCGGCATGACGTACGGCGGTGCCGGTCACCACCCTGTCGCGTTA
ACAGTAGGCAGTAGTCGTCCTGTCGTCTTCTGACGGTAGAATACCAACCA
CCTTCTGCTGCTCAAGTCCACACCTCTTGGGAGCTGTTTGTTCCCACCGG
CATAGTATTTGGTACGACTATACGAGCACTCCATGCCTGGTACACCCACC
CAGGCATGCCAACGCCGCCGCGTGTACATATATAAACGATTTTGAAGTCT
GACTATGCCTCCTTCCTGTACCCCCCGCCAACGCTACGCCTCCCTCCTCC
TTCCCCTCCTGTCGGTTTTCCTCGTGCATGGAAGTCATTATTGTATCCTG
ACACAAATATGCCCAACACAACCGCCACCCCCATGGGAAATTCACGTGTG
CGTTTTGCGATGTAATGCGCCAGGCGCCAGCAAGCGTCGCCTTTGCCGGA
GGGAAGGACCTTTGGCGAGACATGCTGGAGGCCATGGGAGGGCCGTACGC
CGAAATGAGCCGTGTGCCTCACGGTCACCATTGGGCACAGATAGGGGTGA
AGAGCTCGCCGTCTGATTGGTCGTGA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig1373:19289..26114-

>mRNA_M-pyrifera_M_contig1373.6047.1 ID=mRNA_M-pyrifera_M_contig1373.6047.1|Name=mRNA_M-pyrifera_M_contig1373.6047.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=2574bp|location=Sequence derived from alignment at M-pyrifera_M_contig1373:19289..26114- (Macrocystis pyrifera P11B4 male)
CAGGCTCTGATTCAGCGGTACGGTGCGGTGAGACCACCGTCCGACGACTT
CGACGTGAGTCGGGGAGATCGCCGCTTATACGCCGCGGCATTGGAAGTCG
TCGTCGGCAGTCAATGCCATGTCAGCAGGCTCTGATTCAGCGGTACGGTG
CGGTGAGACCACCGTCCGACGACTTCGACGTGAGTCGGGGAGATCGCCGC
TTATACGCCGCGGCATTGGAAGTCGTCGTCGGCAGTCAATGCCATGTCAG
GCCGGCACGGCTCACGTGGTCCCTCCAACGGCTCGTCCGCAACATGCGCC
GCGCGGACGAAAACAATCTGGAGATAGTCGCAGAGAGGGCGGTGGAGAAC
ATGAACACCGGCAGCGATGGCTTGCCCCTTGTGGACAGACAGTCGTGGGA
GGAAGATGCGATGGCCGCGATTTCTCTGGAAACGTTCTTTCCCGGGGCGT
TGAGAGGCGTTGATGGAGATGACAAGATTAATGCAGGCCGGCACGGCTCA
CGTGGTCCCTCCAACGGCTCGTCCGCAACATGCGCCGCGCGGACGAAAAC
AATCTGGAGATAGTCGCAGAGAGGGCGGTGGAGAACATGAACACCGGCAG
CGATGGCTTGCCCCTTGTGGACAGACAGTCGTGGGAGGAAGATGCGATGG
CCGCGATTTCTCTGGAAACGTTCTTTCCCGGGGCGTTGAGAGGCGTTGAT
GGAGATGACAAGATTAATGCAGGGTTTGCAGCCCTCCGAGAGCTTTCGTC
CAAGTGGGCGCTGGCAAAATCCTTAGGGCTGGCAGAGACAGACGACGATG
ATGATTCCAGTCATGATGGCACGGTTGCCAGGAAAAGGAGAAGAAGGAGA
GTCGCACGCCCTAGACACAAGGGTTTGCAGCCCTCCGAGAGCTTTCGTCC
AAGTGGGCGCTGGCAAAATCCTTAGGGCTGGCAGAGACAGACGACGATGA
TGATTCCAGTCATGATGGCACGGTTGCCAGGAAAAGGAGAAGAAGGAGAG
TCGCACGCCCTAGACACAAGATGACGAAGCGGGCGATGAGAGTGCTGCGG
CATCAGGAGCGATACGGAAGCTACCCCGGGGGCAGGCGCGACCGTCGAAC
GTCATCGGGGGCCTCAAGCGGAACCACTTCCGAGGAGTCCGGGTGCTCGG
GGGTACTGGTGACGCCCACGGAGATCCCAGCGAAGGGGGTGTTCCTGATA
TCACACCCGCTGGCAGGGCTTCATTCCCCGGGGGACATTTTTCACCGATC
GGTTGTGTTTTTAGTGCATCACGACGCGGAGGGATCGTACGGGCTGGTGG
TCAACAAGGACAGGGGGGAGACTTTGGAGGAGGCGCTGAGCAGTGACGCT
GTACCTGTGGCGCCGGACGCGCTAAAGCGAGTCCTCGGCAACCCGGTTCG
AACCGGGGGTCCGGTGATGTCGCGCCTGGCGTGGCTGCATCACCACGAGG
AGGTCGGAGGGGTGCGGCTTTCGGAGGACGCGGAGCACCCGATGACGAAG
CGGGCGATGAGAGTGCTGCGGCATCAGGAGCGATACGGAAGCTACCCCGG
GGGCAGGCGCGACCGTCGAACGTCATCGGGGGCCTCAAGCGGAACCACTT
CCGAGGAGTCCGGGTGCTCGGGGGTACTGGTGACGCCCACGGAGATCCCA
GCGAAGGGGGTGTTCCTGATATCACACCCGCTGGCAGGGCTTCATTCCCC
GGGGGACATTTTTCACCGATCGGTTGTGTTTTTAGTGCATCACGACGCGG
AGGGATCGTACGGGCTGGTGGTCAACAAGGACAGGGGGGAGACTTTGGAG
GAGGCGCTGAGCAGTGACGCTGTACCTGTGGCGCCGGACGCGCTAAAGCG
AGTCCTCGGCAACCCGGTTCGAACCGGGGGTCCGGTGATGTCGCGCCTGG
CGTGGCTGCATCACCACGAGGAGGTCGGAGGGGTGCGGCTTTCGGAGGAC
GCGGAGCACCCGGTGTTCTTTTGCGGGGCGATGGAAAAGGCGTCCGAGCT
GCTGGGCGAGGGTGTCGCCGAACCCATGGACTTTTCCTTGCTAGTTGGCG
CATCATCGTGGTTGGTGTTCTTTTGCGGGGCGATGGAAAAGGCGTCCGAG
CTGCTGGGCGAGGGTGTCGCCGAACCCATGGACTTTTCCTTGCTAGTTGG
CGCATCATCGTGGTTGGGTGGCCAGTTGCGAGGCGAGCTCGACCACGGCA
TGTGGATTATGGCCAAGGGTGGCCAGTTGCGAGGCGAGCTCGACCACGGC
ATGTGGATTATGGCCAAGGCGCCAGCAAGCGTCGCCTTTGCCGGAGGGAA
GGACCTTTGGCGAGACATGCTGGAGGCCATGGGAGGGCCGTACGCCGAAA
TGAGCCGTGTGCCTCACGGTCACCATTGGGCACAGATAGGGGTGAAGAGC
TCGCCGTCTGATTGGTCGTGAGCGCCAGCAAGCGTCGCCTTTGCCGGAGG
GAAGGACCTTTGGCGAGACATGCTGGAGGCCATGGGAGGGCCGTACGCCG
AAATGAGCCGTGTGCCTCACGGTCACCATTGGGCACAGATAGGGGTGAAG
AGCTCGCCGTCTGATTGGTCGTGA
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