mRNA_M-pyrifera_M_contig13668.6026.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig13668.6026.1
Unique NamemRNA_M-pyrifera_M_contig13668.6026.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
[Close]
BLAST of mRNA_M-pyrifera_M_contig13668.6026.1 vs. uniprot
Match: D8LLC4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LLC4_ECTSI)

HSP 1 Score: 461 bits (1185), Expect = 5.390e-155
Identity = 275/296 (92.91%), Postives = 278/296 (93.92%), Query Frame = 1 
Query:   43 ERWMEWEPEDNAWSAYVKFEMRQEEPANXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRALAELADSEKTEKFFSAFAHFEERCKEFDRARVIYKYALDQMPREQVPELYRDFIGFEKRHGSVQGIEEVIMNNRRLQYEERASASPLDYDNWFDYLRLEESTGDLDRTREVYERAIANVPPVADKRYWRRYIYLWINYALFEELQAEDAQRTREVYRACLDVVPHKSFTFAKIWLMLAKFEVRHKDLQAARKVLGQAIGMCPKEKLFKGYVQLERDLGEIDRCRKVY 930
            ERWMEWEPEDNA                XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRALAEL+DSEKTEK FSAFAHFEERCKEFDRARVIYKYALDQMPREQVPELYRDFIGFEKRHGSVQGIEEVIMNNRRLQYEERASASPLDYDNWFDYLRLEESTGDLDRTREVYERAIANVPPV +KR+WRRYIYLWINYALFEELQAEDAQRTREVYRACLDVVPHKSFTFAKIWLMLAKFEVRHKDLQAARKVLGQAIGMCPKEKLFKGYVQLERDLGEIDRCRKVY
Sbjct:  163 ERWMEWEPEDNAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRALAELSDSEKTEKLFSAFAHFEERCKEFDRARVIYKYALDQMPREQVPELYRDFIGFEKRHGSVQGIEEVIMNNRRLQYEERASASPLDYDNWFDYLRLEESTGDLDRTREVYERAIANVPPVLEKRFWRRYIYLWINYALFEELQAEDAQRTREVYRACLDVVPHKSFTFAKIWLMLAKFEVRHKDLQAARKVLGQAIGMCPKEKLFKGYVQLERDLGEIDRCRKVY 458
[Close]
BLAST of mRNA_M-pyrifera_M_contig13668.6026.1 vs. uniprot
Match: A0A835ZA95_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZA95_9STRA)

HSP 1 Score: 354 bits (908), Expect = 2.470e-114
Identity = 214/296 (72.30%), Postives = 243/296 (82.09%), Query Frame = 1 
Query:   43 ERWMEWEPEDNAWSAYVKFEMRQEEPANXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRALAELADSEKTEKFFSAFAHFEERCKEFDRARVIYKYALDQMPREQVPELYRDFIGFEKRHGSVQGIEEVIMNNRRLQYEERASASPLDYDNWFDYLRLEESTGDLDRTREVYERAIANVPPVADKRYWRRYIYLWINYALFEELQAEDAQRTREVYRACLDVVPHKSFTFAKIWLMLAKFEVRHKDLQAARKVLGQAIGMCPKEKLFKGYVQLERDLGEIDRCRKVY 930
            ERWM+WEP+DNAW AY+KFE        XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX RAL+EL +  +TEK + +FA FEERCKE+DRARVIYKYALDQMPR+ VP+LYR+F GFEKR G+  GIE+ ++  RRLQYEE  +A P  YD WFDY RLEESTGD +R REVYERA+A VPPVA KR+WRRY++LWINYALFEEL A+D  R R V +ACL VVPH+SFTFAKIWLMLA  EVR +DL AARKVLG AIG CPK KLFKGY+ LE  LGEI+RCR +Y
Sbjct:  162 ERWMDWEPDDNAWGAYIKFETXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERALSELDEESRTEKLYISFAQFEERCKEYDRARVIYKYALDQMPRDLVPDLYREFAGFEKRRGTPSGIEDAVVGRRRLQYEEEVAADPHAYDTWFDYARLEESTGDGNRVREVYERAVACVPPVAQKRFWRRYVWLWINYALFEELAADDQARARAVLKACLQVVPHESFTFAKIWLMLAHLEVRARDLPAARKVLGNAIGRCPKGKLFKGYIALELQLGEIERCRTLY 457
[Close]
BLAST of mRNA_M-pyrifera_M_contig13668.6026.1 vs. uniprot
Match: A0A7S0RPR7_9CHLO (Hypothetical protein n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0RPR7_9CHLO)

HSP 1 Score: 340 bits (873), Expect = 9.610e-111
Identity = 198/307 (64.50%), Postives = 240/307 (78.18%), Query Frame = 1 
Query:   10 LGNSAKARAIFERWMEWEPEDNAWSAYVKFEMRQEEPANXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRALAELADSEKTEKFFSAFAHFEERCKEFDRARVIYKYALDQMPREQVPELYRDFIGFEKRHGSVQGIEEVIMNNRRLQYEERASASPLDYDNWFDYLRLEESTGDLDRTREVYERAIANVPPVADKRYWRRYIYLWINYALFEELQAEDAQRTREVYRACLDVVPHKSFTFAKIWLMLAKFEVRHKDLQAARKVLGQAIGMCPKEKLFKGYVQLERDLGEIDRCRKVY 930
            +GN A ARA+FERWM+WEP+ N W AYV+ E+R +E   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    RA+ EL +  +TE+ F  FA FEE  KE +RAR I+KYALD +P+ Q  ELYR F+ FEK+HG  +GIE+VI++ RR QYEE    +PL YD+WFDY RLEE+ GD D+ REVYERAIAN+PP  +KRYW+RYIYLWINYALFEEL+AED  RTREVYR CL  +PHK F+F+K+WLM A+FE+R K L +ARK+LG AIG  PK K+FK Y+ +E  LG +DRCR +Y
Sbjct:    1 MGNVAGARAVFERWMQWEPDHNGWKAYVRMELRYDEVERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRCYERAVEELGEDGQTEELFIKFAEFEEHSKETERARTIFKYALDHIPKSQATELYRRFVTFEKQHGDREGIEDVIVSKRRFQYEEEVKRNPLSYDSWFDYARLEETHGDHDKVREVYERAIANMPPATEKRYWQRYIYLWINYALFEELEAEDPARTREVYRECLKQIPHKQFSFSKVWLMAAQFEIRQKQLTSARKILGLAIGTAPKNKIFKTYINIELQLGNVDRCRTLY 307
[Close]
BLAST of mRNA_M-pyrifera_M_contig13668.6026.1 vs. uniprot
Match: A0A4Z2BQ93_9TELE (Uncharacterized protein n=2 Tax=Takifugu TaxID=31032 RepID=A0A4Z2BQ93_9TELE)

HSP 1 Score: 334 bits (857), Expect = 3.780e-106
Identity = 162/309 (52.43%), Postives = 209/309 (67.64%), Query Frame = 1 
Query:    4 EMLGNSAKARAIFERWMEWEPEDNAWSAYVKFEMRQEEPANXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRALAELADSEKTEKFFSAFAHFEERCKEFDRARVIYKYALDQMPREQVPELYRDFIGFEKRHGSVQGIEEVIMNNRRLQYEERASASPLDYDNWFDYLRLEESTGDLDRTREVYERAIANVPPVADKRYWRRYIYLWINYALFEELQAEDAQRTREVYRACLDVVPHKSFTFAKIWLMLAKFEVRHKDLQAARKVLGQAIGMCPKEKLFKGYVQLERDLGEIDRCRKVY 930
            EMLGN A  R +FERWMEWEPE+ AW +Y+ FE+R +E  +                                       RA+    +    E  F AFA FEE  KEF+RARVIYKY+LD++P+++  EL++ +  FEK+ G  +GIE+VI++ RR QYEE   A+P +YD WFDYLRL E+  D D  R+VYERAIAN+PP+ +KR+WRRYIYLWINYAL+EEL+ +D +RTR+VY+ACLD++PHK FTFAKIWL+ A+FE+R K LQAARK +G AIG CPK KL KGY++LE  L E DRCRK+Y
Sbjct:  187 EMLGNPAGCRQVFERWMEWEPEEQAWHSYINFELRYKE-VDKARTIYERYILLLTMLIPEEYARFEERHGYIAHSRKVYERAVEFFGEDHIEENLFVAFAKFEETQKEFERARVIYKYSLDRIPKQEAQELFKHYTMFEKKFGDRRGIEDVIVSKRRFQYEEEVKANPHNYDAWFDYLRLVENDADPDTVRDVYERAIANIPPIQEKRHWRRYIYLWINYALYEELEVKDPERTRQVYQACLDLIPHKKFTFAKIWLLYAQFEIRQKSLQAARKTMGMAIGKCPKNKLLKGYIELELQLREFDRCRKLY 494
[Close]
BLAST of mRNA_M-pyrifera_M_contig13668.6026.1 vs. uniprot
Match: H3CZE3_TETNG (Crooked neck pre-mRNA splicing factor 1 n=1 Tax=Tetraodon nigroviridis TaxID=99883 RepID=H3CZE3_TETNG)

HSP 1 Score: 330 bits (846), Expect = 6.020e-105
Identity = 184/310 (59.35%), Postives = 234/310 (75.48%), Query Frame = 1 
Query:    4 EMLGNSAKARAIFERWMEWEPEDNAWSAYVKFEMRQEEPANXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRALAELADSEKTEK-FFSAFAHFEERCKEFDRARVIYKYALDQMPREQVPELYRDFIGFEKRHGSVQGIEEVIMNNRRLQYEERASASPLDYDNWFDYLRLEESTGDLDRTREVYERAIANVPPVADKRYWRRYIYLWINYALFEELQAEDAQRTREVYRACLDVVPHKSFTFAKIWLMLAKFEVRHKDLQAARKVLGQAIGMCPKEKLFKGYVQLERDLGEIDRCRKVY 930
            EMLGN A  R +FERWMEWEPE+ AW +Y+ FE+R +E                 XXXXXXXXXXXXXXXXXXXXXXXXX    E    +  E+  F AFA FEE  KEF+RARVIYKY+LD++P+++  +L++ +  FEK+ G  +GIE+VI++ RR QYEE   A+P +YD WFDYLRL E+  D+D  R+VYERAIAN+PP+ +KR+WRRYIYLWINYAL+EEL+ +D +RTR+VY+ACLD++PHK FTFAK+WL+ A+FE+R K+LQAARK +G AIG CPK KL KGY++LE  L E DRCRK+Y
Sbjct:  160 EMLGNPAGCRQVFERWMEWEPEEQAWHSYINFELRYKEVDKARSIYERYILLVHPXXXXXXXXXXXXXXXXXXXXXXXXXXXAVEFFGEDHIEENLFVAFAKFEEAQKEFERARVIYKYSLDRIPKQEAQQLFKHYTMFEKKFGDRRGIEDVIVSKRRFQYEEEVKANPHNYDAWFDYLRLVENDADVDTVRDVYERAIANIPPIQEKRHWRRYIYLWINYALYEELEVKDPERTRQVYQACLDLIPHKKFTFAKMWLLYAQFEIRQKNLQAARKTMGTAIGKCPKNKLLKGYIELELQLREFDRCRKLY 469
[Close]
BLAST of mRNA_M-pyrifera_M_contig13668.6026.1 vs. uniprot
Match: A0A672G2E6_SALFA (Crooked neck pre-mRNA splicing factor 1 n=1 Tax=Salarias fasciatus TaxID=181472 RepID=A0A672G2E6_SALFA)

HSP 1 Score: 330 bits (846), Expect = 6.320e-105
Identity = 182/312 (58.33%), Postives = 227/312 (72.76%), Query Frame = 1 
Query:    4 EMLGNSAKARAIFERWMEWEPEDNAWSAYVKFEMRQEE---PANXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRALAELADSEKTEKFFSAFAHFEERCKEFDRARVIYKYALDQMPREQVPELYRDFIGFEKRHGSVQGIEEVIMNNRRLQYEERASASPLDYDNWFDYLRLEESTGDLDRTREVYERAIANVPPVADKRYWRRYIYLWINYALFEELQAEDAQRTREVYRACLDVVPHKSFTFAKIWLMLAKFEVRHKDLQAARKVLGQAIGMCPKEKLFKGYVQLERDLGEIDRCRKVY 930
            EMLGN A  R  FERWMEWEPE+ AW +Y+ FE+R +E     +                   XXXXXXXXXXXXXXXXXXXX A+    +    E  F AFA FEE  KEF+R RVIYKYALD++P+ Q  EL++++  FEK+ G  +GIE+VI++ RR QYEE   A+P +YD WFDYLRL ES  D +  REVYERAIAN+PP+ +KR+WRRYIYLWINYAL+EEL+ +D +RTR+VY+ACLD++PHK FTFAKIWL+ A+FE+R K+LQ ARK++G AIG CPK KL KGY++LE  L E DRCRK+Y
Sbjct:  160 EMLGNVAGCRQAFERWMEWEPEEQAWHSYINFELRYKEVDKARSIYERYILLDGLSLCVKNWIXXXXXXXXXXXXXXXXXXXXXAVEFFGEEYVDENLFVAFARFEETQKEFERVRVIYKYALDRIPKHQAQELFKNYTMFEKKFGDRRGIEDVIVSKRRFQYEEEVKANPHNYDAWFDYLRLVESDADPETVREVYERAIANIPPIQEKRHWRRYIYLWINYALYEELEVKDTERTRQVYQACLDLIPHKKFTFAKIWLLCAQFEIRQKNLQGARKIMGTAIGKCPKNKLLKGYIELELQLREFDRCRKLY 471
[Close]
BLAST of mRNA_M-pyrifera_M_contig13668.6026.1 vs. uniprot
Match: A0A8C0YJZ9_CYPCA (Crooked neck pre-mRNA splicing factor 1 n=2 Tax=Cyprinus carpio TaxID=7962 RepID=A0A8C0YJZ9_CYPCA)

HSP 1 Score: 328 bits (841), Expect = 8.660e-105
Identity = 160/308 (51.95%), Postives = 207/308 (67.21%), Query Frame = 1 
Query:   13 GNSAKARAIFERWMEWEPEDNAWSAYVKFEMRQEE--PANXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRALAELADSEKTEKFFSAFAHFEERCKEFDRARVIYKYALDQMPREQVPELYRDFIGFEKRHGSVQGIEEVIMNNRRLQYEERASASPLDYDNWFDYLRLEESTGDLDRTREVYERAIANVPPVADKRYWRRYIYLWINYALFEELQAEDAQRTREVYRACLDVVPHKSFTFAKIWLMLAKFEVRHKDLQAARKVLGQAIGMCPKEKLFKGYVQLERDLGEIDRCRKVY 930
            GN A  R +FERWMEWEPE+ AW +Y+ FE+R +E   +                                        RA+    +   +E  + AFA FEE+ KEF+R RVIYKYALD++P++Q  EL++++  FEKR G  +GIE+VI++ RR QYEE   A+P +YD WFDYLRL ES  D D  REVYERAIAN PP+ +KR+WRRYIYLWINYAL+EEL+ +D +RTR+VY+ACL+++PHK FTFAKIWL+  +FE+R K+LQ AR+ LG AIG CPK KLFKGY++LE  L E DRCRK+Y
Sbjct:  137 GNIAGCRQVFERWMEWEPEEQAWHSYINFELRYKEVDKSRIILNGKALVMVHPEVKNWIKYAHFEEKHGYIALARKVFERAVEFFGEEHISESLYVAFARFEEKQKEFERVRVIYKYALDRIPKQQAQELFKNYTVFEKRFGDRRGIEDVIVSKRRFQYEEEVKANPHNYDAWFDYLRLVESDTDADTVREVYERAIANTPPIQEKRHWRRYIYLWINYALYEELEVKDPERTRQVYQACLELIPHKKFTFAKIWLLYGQFEIRQKNLQNARRGLGTAIGKCPKNKLFKGYIELELQLREFDRCRKLY 444
[Close]
BLAST of mRNA_M-pyrifera_M_contig13668.6026.1 vs. uniprot
Match: A0A4W5MS29_9TELE (Crooked neck pre-mRNA splicing factor 1 n=14 Tax=Euteleosteomorpha TaxID=1489388 RepID=A0A4W5MS29_9TELE)

HSP 1 Score: 329 bits (844), Expect = 2.010e-104
Identity = 185/311 (59.49%), Postives = 229/311 (73.63%), Query Frame = 1 
Query:    7 MLGNSAKARAIFERWMEWEPEDNAWSAYVKFEMRQEE---PANXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRALAELADSEKTEKFFSAFAHFEERCKEFDRARVIYKYALDQMPREQVPELYRDFIGFEKRHGSVQGIEEVIMNNRRLQYEERASASPLDYDNWFDYLRLEESTGDLDRTREVYERAIANVPPVADKRYWRRYIYLWINYALFEELQAEDAQRTREVYRACLDVVPHKSFTFAKIWLMLAKFEVRHKDLQAARKVLGQAIGMCPKEKLFKGYVQLERDLGEIDRCRKVY 930
            MLGN A  R +FERW EWEPE+ AW +Y+ FE+R +E     +                XXXXXXXXXXXXXXXXXXXXXXX ++    +    E  F AFA FEE+ KEF+R RVIYKYALD++P+ Q  EL++ +  FEK+ G  +GIE+VI++ RR QYEE   ASP +YD WFDYLRL ES  D D  REVYERAIAN+PP+ +KR+WRRYIYLWINYAL+EEL+ +D +RTR+VY+ACLD++PHK FTFAKIWL+  +FE+R K+LQAAR+ LG AIG CPK KLFKGY++LE  L E DRCRK+Y
Sbjct:  167 MLGNIAGCRQVFERWTEWEPEEQAWHSYINFELRYKEVDKARSIYERYILLMGIHPDVKXXXXXXXXXXXXXXXXXXXXXXXXSVEFFGEEHVNENLFVAFARFEEKQKEFERVRVIYKYALDRIPKHQAQELFKFYTVFEKKFGDRRGIEDVIVSKRRFQYEEEVKASPHNYDAWFDYLRLVESDADPDTAREVYERAIANIPPIQEKRHWRRYIYLWINYALYEELEVKDPERTRQVYQACLDLIPHKKFTFAKIWLLYGQFEIRQKNLQAARRGLGTAIGKCPKNKLFKGYIELELQLREFDRCRKLY 477
[Close]
BLAST of mRNA_M-pyrifera_M_contig13668.6026.1 vs. uniprot
Match: A0A8D3D5A8_SCOMX (Crooked neck pre-mRNA splicing factor 1 n=3 Tax=Scophthalmus maximus TaxID=52904 RepID=A0A8D3D5A8_SCOMX)

HSP 1 Score: 330 bits (846), Expect = 3.640e-104
Identity = 163/309 (52.75%), Postives = 206/309 (66.67%), Query Frame = 1 
Query:    4 EMLGNSAKARAIFERWMEWEPEDNAWSAYVKFEMRQEEPANXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRALAELADSEKTEKFFSAFAHFEERCKEFDRARVIYKYALDQMPREQVPELYRDFIGFEKRHGSVQGIEEVIMNNRRLQYEERASASPLDYDNWFDYLRLEESTGDLDRTREVYERAIANVPPVADKRYWRRYIYLWINYALFEELQAEDAQRTREVYRACLDVVPHKSFTFAKIWLMLAKFEVRHKDLQAARKVLGQAIGMCPKEKLFKGYVQLERDLGEIDRCRKVY 930
            EMLGN A  R  FERWMEWEPE+ AW +Y+ FE+R +E                                          RA+    +    E  F AFA FEE  KE +R RVIYKYALD++P++Q  EL++++  FEK+ G  +GIE+VI++ RR QYEE   A+P +YD WFDYLRL ES  D D  REVYERAIAN+PP+ +KR+WRRYIYLWINYAL+EEL+ +D + TR+VY+ACLD++PHK FTFAKIWL+ A+FE+R K+LQ ARKV+G AIG CPK KL KGY++LE  L E DRCRK+Y
Sbjct:  154 EMLGNVAGCRQAFERWMEWEPEEQAWHSYINFELRYKE----VDKARTIYERYILLWNWIKYARFEEKHGYIAHSRKVFERAVEFFGEEYVNENLFVAFARFEEAQKEMERVRVIYKYALDRIPKQQAQELFKNYTMFEKKFGDRRGIEDVIVSKRRFQYEEEVKANPHNYDAWFDYLRLVESDADPDTVREVYERAIANIPPIQEKRHWRRYIYLWINYALYEELEVKDPETTRQVYQACLDLMPHKKFTFAKIWLLYAQFEIRQKNLQGARKVMGTAIGKCPKNKLLKGYIELELQLREFDRCRKLY 458
[Close]
BLAST of mRNA_M-pyrifera_M_contig13668.6026.1 vs. uniprot
Match: A0A8C7UVR3_ONCMY (Crooked neck pre-mRNA splicing factor 1 n=3 Tax=Oncorhynchus TaxID=8016 RepID=A0A8C7UVR3_ONCMY)

HSP 1 Score: 327 bits (837), Expect = 5.330e-104
Identity = 182/308 (59.09%), Postives = 226/308 (73.38%), Query Frame = 1 
Query:    7 MLGNSAKARAIFERWMEWEPEDNAWSAYVKFEMRQEEPANXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRALAELADSEKTEKFFSAFAHFEERCKEFDRARVIYKYALDQMPREQVPELYRDFIGFEKRHGSVQGIEEVIMNNRRLQYEERASASPLDYDNWFDYLRLEESTGDLDRTREVYERAIANVPPVADKRYWRRYIYLWINYALFEELQAEDAQRTREVYRACLDVVPHKSFTFAKIWLMLAKFEVRHKDLQAARKVLGQAIGMCPKEKLFKGYVQLERDLGEIDRCRKVY 930
            MLGN A  R +FERW EWEPE+ AW +Y+ FE+R +E                    XXXXXXXXXXXXXXXXXXXXX  ++    +    E  F AFA FEE+ KEF+R RVIYKYALD++P++Q  EL++ +  FEK+ G  +GIE+VI++ RR QYEE   ASP +YD WFDYLRL ES  D D  REVYERAIAN+PP+ +KR+WRRYIYLWINYAL+EEL+ +D +RTR+VY ACLD++PHK FTFAK+WL+  +FE+R K+LQAAR+ LG AIG CPK KLFKGY++LE  L E DRCRK+Y
Sbjct:  160 MLGNIAGCRQVFERWTEWEPEEQAWHSYINFELRYKEVDKARSIYERYILLMGSNWIXXXXXXXXXXXXXXXXXXXXX--SVEFFGEEHVDEHLFVAFARFEEKQKEFERVRVIYKYALDRIPKQQAQELFKFYTVFEKKFGDRRGIEDVIVSKRRFQYEEEVKASPHNYDAWFDYLRLVESDADPDTAREVYERAIANIPPIQEKRHWRRYIYLWINYALYEELEVKDPERTRQVYLACLDLIPHKKFTFAKMWLLYGQFEIRQKNLQAARQGLGTAIGKCPKNKLFKGYIELELQLREFDRCRKLY 465
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig13668.6026.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LLC4_ECTSI5.390e-15592.91Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835ZA95_9STRA2.470e-11472.30Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S0RPR7_9CHLO9.610e-11164.50Hypothetical protein n=1 Tax=Pyramimonas obovata T... [more]
A0A4Z2BQ93_9TELE3.780e-10652.43Uncharacterized protein n=2 Tax=Takifugu TaxID=310... [more]
H3CZE3_TETNG6.020e-10559.35Crooked neck pre-mRNA splicing factor 1 n=1 Tax=Te... [more]
A0A672G2E6_SALFA6.320e-10558.33Crooked neck pre-mRNA splicing factor 1 n=1 Tax=Sa... [more]
A0A8C0YJZ9_CYPCA8.660e-10551.95Crooked neck pre-mRNA splicing factor 1 n=2 Tax=Cy... [more]
A0A4W5MS29_9TELE2.010e-10459.49Crooked neck pre-mRNA splicing factor 1 n=14 Tax=E... [more]
A0A8D3D5A8_SCOMX3.640e-10452.75Crooked neck pre-mRNA splicing factor 1 n=3 Tax=Sc... [more]
A0A8C7UVR3_ONCMY5.330e-10459.09Crooked neck pre-mRNA splicing factor 1 n=3 Tax=On... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig13668contigM-pyrifera_M_contig13668:217..8367 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score467.6
Seed ortholog evalue4.5e-129
Seed eggNOG ortholog2880.D8LLC4
Preferred nameCRNKL1
KEGG koko:K12869
KEGG Pathwayko03040,map03040
KEGG ModuleM00355
Hectar predicted targeting categoryother localisation
GOsGO:0000245,GO:0000375,GO:0000377,GO:0000398,GO:0000974,GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005681,GO:0005684,GO:0006139,GO:0006396,GO:0006397,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008380,GO:0009987,GO:0010467,GO:0016043,GO:0016070,GO:0016071,GO:0022607,GO:0022613,GO:0022618,GO:0031974,GO:0031981,GO:0032991,GO:0034622,GO:0034641,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0046483,GO:0065003,GO:0070013,GO:0071007,GO:0071010,GO:0071011,GO:0071012,GO:0071013,GO:0071014,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1902494,GO:1990904
EggNOG free text desc.spliceosomal complex assembly
EggNOG OGsKOG1915@1,KOG1915@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko03036,ko03041
Exons8
Model size936
Cds size930
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815822.5029259-UTR-M-pyrifera_M_contig13668:216..2221622815822.5029259-UTR-M-pyrifera_M_contig13668:216..222Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig13668 217..222 +
1692277589.033546-UTR-M-pyrifera_M_contig13668:216..2221692277589.033546-UTR-M-pyrifera_M_contig13668:216..222Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig13668 217..222 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815822.5133073-CDS-M-pyrifera_M_contig13668:222..3471622815822.5133073-CDS-M-pyrifera_M_contig13668:222..347Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig13668 223..347 +
1692277589.04537-CDS-M-pyrifera_M_contig13668:222..3471692277589.04537-CDS-M-pyrifera_M_contig13668:222..347Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig13668 223..347 +
1622815822.5238023-CDS-M-pyrifera_M_contig13668:944..10431622815822.5238023-CDS-M-pyrifera_M_contig13668:944..1043Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig13668 945..1043 +
1692277589.0579538-CDS-M-pyrifera_M_contig13668:944..10431692277589.0579538-CDS-M-pyrifera_M_contig13668:944..1043Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig13668 945..1043 +
1622815822.5432284-CDS-M-pyrifera_M_contig13668:1544..16551622815822.5432284-CDS-M-pyrifera_M_contig13668:1544..1655Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig13668 1545..1655 +
1692277589.070015-CDS-M-pyrifera_M_contig13668:1544..16551692277589.070015-CDS-M-pyrifera_M_contig13668:1544..1655Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig13668 1545..1655 +
1622815822.554153-CDS-M-pyrifera_M_contig13668:2668..27801622815822.554153-CDS-M-pyrifera_M_contig13668:2668..2780Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig13668 2669..2780 +
1692277589.0864263-CDS-M-pyrifera_M_contig13668:2668..27801692277589.0864263-CDS-M-pyrifera_M_contig13668:2668..2780Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig13668 2669..2780 +
1622815822.5682554-CDS-M-pyrifera_M_contig13668:4195..43211622815822.5682554-CDS-M-pyrifera_M_contig13668:4195..4321Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig13668 4196..4321 +
1692277589.0971725-CDS-M-pyrifera_M_contig13668:4195..43211692277589.0971725-CDS-M-pyrifera_M_contig13668:4195..4321Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig13668 4196..4321 +
1622815822.5788357-CDS-M-pyrifera_M_contig13668:6815..69431622815822.5788357-CDS-M-pyrifera_M_contig13668:6815..6943Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig13668 6816..6943 +
1692277589.1070578-CDS-M-pyrifera_M_contig13668:6815..69431692277589.1070578-CDS-M-pyrifera_M_contig13668:6815..6943Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig13668 6816..6943 +
1622815822.5897255-CDS-M-pyrifera_M_contig13668:7446..75761622815822.5897255-CDS-M-pyrifera_M_contig13668:7446..7576Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig13668 7447..7576 +
1692277589.116219-CDS-M-pyrifera_M_contig13668:7446..75761692277589.116219-CDS-M-pyrifera_M_contig13668:7446..7576Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig13668 7447..7576 +
1622815822.5994718-CDS-M-pyrifera_M_contig13668:8268..83671622815822.5994718-CDS-M-pyrifera_M_contig13668:8268..8367Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig13668 8269..8367 +
1692277589.1273353-CDS-M-pyrifera_M_contig13668:8268..83671692277589.1273353-CDS-M-pyrifera_M_contig13668:8268..8367Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig13668 8269..8367 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig13668.6026.1prot_M-pyrifera_M_contig13668.6026.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig13668 223..8367 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig13668.6026.1

>prot_M-pyrifera_M_contig13668.6026.1 ID=prot_M-pyrifera_M_contig13668.6026.1|Name=mRNA_M-pyrifera_M_contig13668.6026.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=310bp
MLGNSAKARAIFERWMEWEPEDNAWSAYVKFEMRQEEPANARLVFQRYVE
AHPHSRAFLKWARWEDKQSQYALARGVYERALAELADSEKTEKFFSAFAH
FEERCKEFDRARVIYKYALDQMPREQVPELYRDFIGFEKRHGSVQGIEEV
IMNNRRLQYEERASASPLDYDNWFDYLRLEESTGDLDRTREVYERAIANV
PPVADKRYWRRYIYLWINYALFEELQAEDAQRTREVYRACLDVVPHKSFT
FAKIWLMLAKFEVRHKDLQAARKVLGQAIGMCPKEKLFKGYVQLERDLGE
IDRCRKVYR*
back to top

mRNA from alignment at M-pyrifera_M_contig13668:217..8367+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig13668.6026.1 ID=mRNA_M-pyrifera_M_contig13668.6026.1|Name=mRNA_M-pyrifera_M_contig13668.6026.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=8151bp|location=Sequence derived from alignment at M-pyrifera_M_contig13668:217..8367+ (Macrocystis pyrifera P11B4 male)
CAGGAAATGCTGGGGAACTCGGCGAAGGCGAGGGCCATATTCGAGCGGTG
GATGGAGTGGGAACCGGAGGACAACGCGTGGAGCGCCTACGTGAAGTTCG
AGATGCGTCAGGAAGAGCCGGCGAACGCGAGGTGGGCTGGGGAAAACCCG
TTTTCATTTTATTTCGTAACATTAAGAAGGGACACCTTAGTTGTGTGAGA
TCGAGAATCTCGTCGGAGTCTTAGCAGGCTGCGGGTGATACTTCGATCGC
ACGTGTACTATTTTGCAGGGCGTTTTTTTCTACCCTGTGCTGCATCCGAT
ACACGGTCTTTTTTTCCGCCCCGGTTTGTCATCATGTGTCCAGCAAGGAT
TGCGAAACGTGGAGGAGCCTCTTTTTGTTTTGATGGGGGGGGGGGGGGGG
TTATGGTGAATTTTTATGAATACTTGGTGGTCCTGACGTTATCTCCTTGT
TCTCTCGTTTCTTTCGTTTGTTTTGCCTGTTCTTCCTTCCGAAATAGCTC
ATCTGGAAGCGAACAAAAAACATTGAGAGACAAATAATCACCTTTTGGTC
ACGACATGCATTGTCACTCGTCCCCAGGGAGTGTTCAGCGCGTCACACAC
ATATGCCTTCAACGCCGTTTGTTGTTGGCGTGGGGTTTCCCCGAAGAGTG
GCGGGATAAAGAGGGAGTTCCTTTCTAATTGTGACATCTCGGCGCGATTT
TTTTTCCCCGCGGCGTTGGTCTTGCCAGGTTGGTGTTCCAGCGCTACGTG
GAGGCGCACCCGCACTCGCGCGCGTTCCTGAAGTGGGCGAGATGGGAGGA
CAAGCAGTCGCAGTACGCGCTCGCACGGTGAGTGGGTAGTTGTGTTGTTT
GGTCTCCGTCGCTATATGTCGGTGGTGTTGGTGTTGGTGGTGGTATTAGT
GGTGGTGTTGGTATTGGTGGTGTTGTGGTGTTGGTGTGTTGTTTTTGTGG
TATTGGTATTGTTGGTACTGGTGTTGTTGGCGTTTGTGCTACTGGTGTCA
TTTGTGTTGTTGATGTTGGGTGTTGGTGTCAGTGTTGTACTCTAGAGCTT
GCCCTCTTGCCAGTTGTGTCCGTTTACGTGACCGACTACAACGAGCCGCG
AACCGTCCATCTATCCGTCTGGCGGCCTGTTTACACCGCTGTCTCAATGT
TCTTTCTGCCTTTGCCATCTTTCTGATCCGCCGGTCTATCTTTCCGACCG
TTCTGATTCGTCGGCCTGTCTCCCCTCCCCCTCGCCACGGTTTTGGTTTC
GCTCGCCCTCTCATGGCATCCCACCCGCGAAAAACACGCCTCCCGTTCTT
TGGTCGTCGTATGTACCTGGTATTGCAGAGGGGTTTACGAGCGAGCGCTG
GCGGAGCTGGCCGACTCGGAGAAGACGGAAAAGTTCTTCAGTGCTTTCGC
GCACTTCGAGGAGCGCTGCAAGGAGTTCGACCGCGCACGGTAAGTTTAGA
ACACCCACCCCACCCGCCCGCCCGCCCCATGCATGAGTACCCACCGACCA
CATGCATGGTATTTGTTGTTGGCGGTGGAAGTTGTTGTTGTGGTGACGTC
GGCGGTGCTGTCGGTGTTAGCGTTGGTGGTTGTTGCATTAGGGGTGATGG
CGGTGTTGTCTGTGTGGTCTGCATCATTGATATTAATATTGTTGGTGGTG
ATGGTGCTGTTGGTGGGGGCGGTGGTGCTGTTGGCGTCGTTGTTGGTAGT
GGTGCCGATGGTGGTAGTGGTGGTGGTGATGGTGGTGGTGGTGGTGGTGG
TGGTGGTGATGGTGGGCGATCACTTTGCATCGCCTGGGTCGTGTGATCGC
TCGGCGAGCGTCACCTCTAGAAGGGCGAGGCGTTATCGTTGCCAACAGGG
TGTCGGGGCGGGCGGACAGGGCTGTTGGCGTCGCGGGACAAGAGAGCTGG
CGGCCGCGGCCGAGTGGTGGCAGTGGTGTGCGCGTGGTTGGCAGACGGCT
GTCGATACGCCCCGGGGGGGTTACGCTCAGAGAAGCACCCTGACACGCCA
CCATATATCATGCAGAGGGGAAGACCCCCCTGATCACGGCGCTTCGCGCT
TGGTAAAAGCTTTGTCTGCCCGGTCGTTGAATACCCCACGTGTTCCGTCC
CGCCATTGTAGGCATGCGAGGGTCCATGGGCATTCGACTACGACCATGTG
CGTGATATCAGTACGACCCCCCCCCCCCCCCCCCCCCCCCCTCCCGGTCT
CGCCGTGTGCTTGTTTTTTGTTTTTCTGGCCCCTTGTTTTCCGTGGCGGC
GTGGGGGTTGCNNNNNNNNNNGGCGTTGAATACCCCCCGTGTTCCGGCCC
GCCCTTTTTGGCATGCGGGGGGCCAAGGGCATTCGACTACCACCCTGTTC
GTGGTATCCGGTCCCCCCCCCCCCCCCCCCCCCCGTCCTGATCTCGGTTC
GCGCTGTTTCGTTGTTGTCCGTCTTCGCGGCCTTTGGTTCCACGTGGCGC
AGTGTGATCTACAAGTACGCGTTGGACCAGATGCCTAGGGAGCAGGTTCC
CGAGCTGTACCGTGATTTCATCGGCTTCGAGAAGAGGCACGGATCTGTGC
AGGGCATCGAAGAGGTTAGAAGAACCGCGGCCCCGTTCTTACCCCATTTG
CGAAACTGCCTCCATATATTTTTGGGAAAATAATAATTGGAATTAAAGTA
GTGTGGGGTATATTCTGCACCCACGTTTTTTGTGAACAACCTACTTGAAA
TTTGTGTGGGTTGTATTATGCACTCACGCTATTACGGGGGAACATACTGT
AATTCCGAACCAAACATTATGTGCACTCGTATAGGGATACCTGTTTTTTG
GGCCCACCTTTGGTTCTGATTGCTGTGTTCTCCCCGCATTACTTTAATTT
TGTCTGGGTTAAATTCGGCACCGACGTTTTTGGGAGCAATGTACTTGAAA
TTTGTGTGGTACATTTTTTGCAGTGGCACCAGGTTTGACGGTGGTGGGGC
GTTTTGCTGGTTTCCGGCGTTTTTATGGGGCCGAGGGGGGGATGGTTGAG
CACGATGGTTGATGTTCGGTGCGTCTTTTGCGGGGACGAGGTCGAGCCAT
AGCGTCTCTACGGCTGCTGTTCCGTCTCGCGGGTGTTGGTGTAGGACCCT
GTAGGTAGGGGACTGGTGTGTTGCGAAACATTGAACGCCGTATCTTCGAT
GGTGTAGGTGTTGGTGTCGCTGTTGGTGTTGGTGGTGTTCCTGTTGATTG
TTGGTGTTGGTGTTGGTATTGACGTCGTGGTTGCTGTTGCGTTGCTAGTG
TTGCTGATGTTGGTTGTCGGCGAAAATGTTGTTGTCGTTGCTGTTCTTGT
TCTTGTTCTTGTTGGTGGTGTTTGTGTTACTGGTGGTGTTGGTGTTGATG
GTGGTGGTGGTGTTGCTGTCGTACGTACTGTATGTAGTTGCTGTTGATGT
CTTTGCTGGTGTTGGTGCTGGTACTGGCGTCAATGTCGTCATTCATTTTG
GTGTTCTGTGTGGGTGTTGGCGTCGATGCCGTTGCCGATTTTTGTGCTTA
TTTGTTAACGTTTCGTCAGGTGCCTTCCCTCCCCGCCACCCGTCGCCGAC
CTTCCTCTCCTCCCCGTACCCCTTCCCTTTCTCGCGTGAAAATGTCGACT
ATCCTGGCACCCAATCAGTCGAACTCACAGCTGATGTAATACAGTGTTTC
CACACCTCGAACGGATCATCTACTGATCATTCCCACTTTATGATCTAGAT
CTTTCAAGGCAGATAGATCATATAAATCATAGGTCCGATTTTGTATGATC
TAGGTCATGTTGCCGGGTGAGACCTGTATGTTCGGCATGCTCTTTATAGC
ACATGTTTCCTTGGTTGGATCTGTATTAGTGCAGATCCTGTAAAGCTTCT
CACAGGGGCAGGTAATAAACTAGATGATGTACTGTAGACAGATCAAGATA
GATCATCATCTATCTGCCCGAGGTGTGAGAAATTTGGGAATAACCCCGTA
TGAACGGTGACGGTACCGTTTTTTAACAGGTCATCATGAACAACCGACGC
CTCCAGTACGAGGAGCGGGCTTCGGCATCCCCGTTGGACTACGACAACTG
GTTCGACTACTTGCGGCTGGAGGAGTCTACGGGCGACCTGGACCGCACGC
GAGAGGTAATCACATGCGCGATGCAGCAGCGGTAGGTAGTCCTGCCGTTT
TTTTGTTTTTTGTTTTTTTTTTGTTTTTCCTGTTTTACGTATCCATGTGA
GGTTCGCGCTGAACGAGCAGCAAACCGTGCCGTCCTCGATGCCCTGGATC
TCTTGTCGCAGCCACTATTCCGTTTCCCCACCTGCGAAATGCGTCCCACA
CCCACACTATTCAGAGCTGCAACTATTGTGTCCCAAAAGAAGTGCGAACG
GTAATAGAGGGGTGCATTGGTACCCGGGTGACATCCCTACTTTTATCCCT
TGCACCCAGTGCACTCCCGCTGTATTGGTATACCCTTGCAAGGCCATGTC
GTTCCACCGTGATATCACTACACCGCCCAGCCATTCTATATAGCGTTATA
CCAATACGCCGCTTCACCAACACCTGCTATGGTGGAGTAGTGGTCCCTCT
ATTATACGTAATGCCGGTATATATGCGCCAGCCAACAATACCGGCACTAT
AACGGCGACCGGCACTACTTCGCACGCTACTACACTGGTGAATCCCATGT
GTGCCAAGCCATTCCGCAGGCTCTACAGCGGGCAACCGGCACTATAGAGG
GACCACTACCGCGCACCTATCCCCAGGGATAGTAGACGTTCTCTGTTGAG
GAGGGAGCCCAGGCAGTTCGAAAATGCTCGGCCCAAAAAAAGGCCCCTCT
CCTGTACCATGGCTCAGCGGGGCGTTTTTTTTTTCGGTTGTTCTTTTTGT
GAAAGAAGCGTAACATCAGCAGTCGACGTAAAGTCAATTACCTTGATATC
CTTTGTTAACGCCCCGCCCCCATTGCTTCCCTCCCCCCCCCCCCTCAAAT
GGCCGAAAAAGTCAAAACGTTGTGTTATCTCCGGGGAGTAAGCTTTTATT
TACGAACTCCCCCCTACCTCTTTGGTATCCCCGGGAACAACTTTGTACTC
GAAATTTGTCGCTGTCCCCCGGGGGACAGGACGAAAAAACGAAAAAACGA
TGTCACCCCGCGGGGAGAACATAAAGTGTTTTTCACGCTTCCCCGCCCCT
GCGTACCTCGCGCTCAATGACCAGCGATGTCGCGTCTCAACATCATCTAC
GAGCAAGTACATGAAGAGCAAAGGACGGACAACACTTGGGAATGCTTGCA
CACTTTCTTTGGGGGGGTAGTCGTGACTCGCGACGAGGAGAAGGGGGATG
GCCCCTCTGACAACCAAACGAAAGGAGTCTAAGGACTCGAGCGTACCCTC
CTGATATGCGCAAGCATCTCCCCCGGGCGAAATCAAAGAAACTTAGGTCT
AGTAGCAGCATCAGGGAGGGTAAGCAGCAGCAGCAGAGGAGTCGGAGCAA
GCAGTTGGGGTACGCTCGCGGGCGTGCTGCAACTGTTGGCGGGGAAGCAG
CACCCGACGCAAGCACCCAGGGTCAGCTGGAAAATACAATGACAACAACT
AATTCACCTGTGTGTTTCCGACGAAGTGTTTGAAGCTTGTTGAGACTCTA
AAAATCCCTGATGTCCTGCCGCGGGGCCCTACCCCCGACCGCTTGGTCAC
GATGTACCACTCTGGCCGGAAATATATGGAGCCTTTTAACTTAAATATGA
AGACCCAACGGTGCTTATATTTTCGATCAAAGTGGTACAGTGGACCATCT
AGCTCGTAACCTACCTTTCTGATAATGAGGTGGAGGATCTGTATAGTACA
CAGATCCAATCCAGGAAACATGTGCTATAATGCTAGTGTTGTAGACCATA
CCTGGTACAGATTATACGTCTGCCACCCGGCAACGTGAGCTAGATCATGC
AGATCGGGGGCATATCTGTCTTGAATGATCTGCGCTATTAATATTACGAG
ACCATAGTAAATAGGAACAAATACTATTATTACGGGGGACCATAGTAAGC
AGGACCAAATATTGTTAGTAAAACTAGGTAAATGTACAGGTTTTTATGTA
TACCATAGGTCCTATTAACTATGGACCCCCGTAATAGTAAAAATATGTAA
ATGTATAGGGTTTGTGTGTGCCGTAGGTCCTCTTTACTATGATCCCCCGT
AGATCATTTGCAATAGTGCCGGTCCCTCTATAGTGCCGGTATGATATGCG
CCATGCAGCCAATTCAATACCGGCACTACAGCAGCAACGTCAACCGGCAC
TAATTACTCCGCACGCCACCCCCCTTCAGTGAATCTTACATGTGCGGAGC
GATTCCACAGACACAACATCGGGCAACCGGCACTATAGAGAAACCACTAC
CGTATTGGATATCAATGATCCGTCCGTTGTGCAGAACGTTATCGGAATTA
ATATATATATATATATGCTGAGGCGTTTTTGTGGTACTATCGATACCTTT
TTTCCGGAGGAGCTGGTCCAAGCCATCTATGCCGGGTACGCTGTCGCTCA
TCTCGGCCTGTGCTTTTCTTTTTTGCTCATTTGTCCAATCACCCGGCCCT
CCCCCCCTCGCCCTCCCCTCCCGCTGTTGGTACGAACCCCGAACTCAAGG
TGTACGAGCGCGCGATCGCTAACGTCCCCCCTGTAGCGGACAAGCGGTAC
TGGAGGCGTTACATCTACCTCTGGATCAACTACGCCCTCTTCGAGGAGCT
CCAGGCGGAGGACGCTCAGAGGACGCGGTGGGTTGATTGTAGACGTACGC
TTTAGCTTCAGTTCTATATCACATCAATGTAGGCGTTTTTTGGTTGCTGT
AGTTTTCCCTGGGGTATTGTTCCACTCCAAGCGTATTGGAGCCTACCTTA
TGGCGATTTGTTAATGCGAGAACAACCGCTGCTGCAGCAGGAATTCAGCG
CAGGAGAGCGGGAAAAGTCGAGAATGGGACACGGGGGGGGGGCGGGGCAC
GGTGACCAGAGGCAACAGAGACAGAAAGGAAGAGGCGACGAGGATGGGAG
GGGGGGGGGGCGGGTCGCTCAGCAATACGGGTGGTCTCGACGGCAAGCAT
GCTGGGTATGTTTCAAGATGGTGGAGGAGGGCACACGCCGGGATAGACTG
AGTGGCGTTGTTCAACGTGCTTCCATTTTTATGTTGGTCTACATATTCCT
TACCGCCCCAGTCCCCTCCGACCCCCCCCCACCCCCCCGCTTTTTCCCTA
CATCTCTACTATTGCTTCCGGGCCGCGCAGCGAGGTGTACCGCGCGTGTC
TCGACGTGGTCCCACACAAGTCCTTCACCTTCGCCAAGATTTGGCTCATG
CTGGCCAAGTTCGAGGTTCGCCACAAAGACCTGCAGGCGGCGAGGAAGGT
CCTAGGACAGGTGAGGGGAGGCGTCTCGGCGGTGGGGGGTGGTGTAAGCC
TCAGCCTTCCCTTGCGGCGGTGCGCGCTGGGGTTTTGCTGTAGAAGTATG
GATATTTAGTGGCCGGGGGGGGGCGGGGAGCGGGGGGTGTACTCATGTCA
CGTATGGCCGTAGTCGTATGACCGTAGATGAAGGGGACGAGGGCGGCAGA
AACATGATACCGCGCTTGGTCCTCTCAAGAGAGTCTCACGATTGCCGATC
GTTCGTCTCCTTCTACTGCTGTCTTTTGCTCTAGGATTCCTCTCGCTTGC
CTTGGGAATGGACCCTGTCGTAAAGGCGGCCGACCTAACATATATATGGC
GCGGTGGAGTTGCTCGGGCGTAGCAAGCGGCAGTGGCTCTTCTGTGCGCT
CACGCGCTTGCTTGTCTGCGATCAGGCACCGATGAAGAGACCCGCGCGCG
TGTAGAGCAAGATTATTCACGCTTCTAGTCCGATATTTCGGTTCACCACG
TGAACGTACAAACTGCAGCGGCAAGAGCGCTTGCACGGTCGAGCAACCAC
GTGATGTATGTCTACGGTAGTGACGACCAAACCGGCGAACAAAGCCCCGC
TAGGCACCAACGCTCGCGCAAAGGGAGGAACTCAAGCTGACCAACCCGGC
TTTTACGGGTGCTGCTCGCGTGTACCACCCCCCGACCTACCTACCACCCC
AGGCGATCGGCATGTGCCCGAAAGAGAAGCTGTTCAAGGGGTACGTGCAG
CTGGAGAGGGACTTGGGAGAGATCGACCGATGTCGCAAGGTTTACAGGTG
A
back to top

Coding sequence (CDS) from alignment at M-pyrifera_M_contig13668:217..8367+

>mRNA_M-pyrifera_M_contig13668.6026.1 ID=mRNA_M-pyrifera_M_contig13668.6026.1|Name=mRNA_M-pyrifera_M_contig13668.6026.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1860bp|location=Sequence derived from alignment at M-pyrifera_M_contig13668:217..8367+ (Macrocystis pyrifera P11B4 male)
ATGCTGGGGAACTCGGCGAAGGCGAGGGCCATATTCGAGCGGTGGATGGA
GTGGGAACCGGAGGACAACGCGTGGAGCGCCTACGTGAAGTTCGAGATGC
GTCAGGAAGAGCCGGCGAACGCGAGATGCTGGGGAACTCGGCGAAGGCGA
GGGCCATATTCGAGCGGTGGATGGAGTGGGAACCGGAGGACAACGCGTGG
AGCGCCTACGTGAAGTTCGAGATGCGTCAGGAAGAGCCGGCGAACGCGAG
GTTGGTGTTCCAGCGCTACGTGGAGGCGCACCCGCACTCGCGCGCGTTCC
TGAAGTGGGCGAGATGGGAGGACAAGCAGTCGCAGTACGCGCTCGCACGG
TTGGTGTTCCAGCGCTACGTGGAGGCGCACCCGCACTCGCGCGCGTTCCT
GAAGTGGGCGAGATGGGAGGACAAGCAGTCGCAGTACGCGCTCGCACGAG
GGGTTTACGAGCGAGCGCTGGCGGAGCTGGCCGACTCGGAGAAGACGGAA
AAGTTCTTCAGTGCTTTCGCGCACTTCGAGGAGCGCTGCAAGGAGTTCGA
CCGCGCACGAGGGGTTTACGAGCGAGCGCTGGCGGAGCTGGCCGACTCGG
AGAAGACGGAAAAGTTCTTCAGTGCTTTCGCGCACTTCGAGGAGCGCTGC
AAGGAGTTCGACCGCGCACGTGTGATCTACAAGTACGCGTTGGACCAGAT
GCCTAGGGAGCAGGTTCCCGAGCTGTACCGTGATTTCATCGGCTTCGAGA
AGAGGCACGGATCTGTGCAGGGCATCGAAGAGTGTGATCTACAAGTACGC
GTTGGACCAGATGCCTAGGGAGCAGGTTCCCGAGCTGTACCGTGATTTCA
TCGGCTTCGAGAAGAGGCACGGATCTGTGCAGGGCATCGAAGAGGTCATC
ATGAACAACCGACGCCTCCAGTACGAGGAGCGGGCTTCGGCATCCCCGTT
GGACTACGACAACTGGTTCGACTACTTGCGGCTGGAGGAGTCTACGGGCG
ACCTGGACCGCACGCGAGAGGTCATCATGAACAACCGACGCCTCCAGTAC
GAGGAGCGGGCTTCGGCATCCCCGTTGGACTACGACAACTGGTTCGACTA
CTTGCGGCTGGAGGAGTCTACGGGCGACCTGGACCGCACGCGAGAGGTGT
ACGAGCGCGCGATCGCTAACGTCCCCCCTGTAGCGGACAAGCGGTACTGG
AGGCGTTACATCTACCTCTGGATCAACTACGCCCTCTTCGAGGAGCTCCA
GGCGGAGGACGCTCAGAGGACGCGGTGTACGAGCGCGCGATCGCTAACGT
CCCCCCTGTAGCGGACAAGCGGTACTGGAGGCGTTACATCTACCTCTGGA
TCAACTACGCCCTCTTCGAGGAGCTCCAGGCGGAGGACGCTCAGAGGACG
CGCGAGGTGTACCGCGCGTGTCTCGACGTGGTCCCACACAAGTCCTTCAC
CTTCGCCAAGATTTGGCTCATGCTGGCCAAGTTCGAGGTTCGCCACAAAG
ACCTGCAGGCGGCGAGGAAGGTCCTAGGACAGCGAGGTGTACCGCGCGTG
TCTCGACGTGGTCCCACACAAGTCCTTCACCTTCGCCAAGATTTGGCTCA
TGCTGGCCAAGTTCGAGGTTCGCCACAAAGACCTGCAGGCGGCGAGGAAG
GTCCTAGGACAGGCGATCGGCATGTGCCCGAAAGAGAAGCTGTTCAAGGG
GTACGTGCAGCTGGAGAGGGACTTGGGAGAGATCGACCGATGTCGCAAGG
TTTACAGGTGAGCGATCGGCATGTGCCCGAAAGAGAAGCTGTTCAAGGGG
TACGTGCAGCTGGAGAGGGACTTGGGAGAGATCGACCGATGTCGCAAGGT
TTACAGGTGA
back to top