mRNA_M-pyrifera_M_contig13646.6021.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig13646.6021.1 vs. uniprot
Match: A0A6H5JWC3_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JWC3_9PHAE) HSP 1 Score: 343 bits (881), Expect = 1.380e-113 Identity = 179/246 (72.76%), Postives = 206/246 (83.74%), Query Frame = 1
Query: 1 QVGAVPSTVTTADIEQLASQFSSKEQEAVVNATAVMGFLNRFMDASGMTLEMEAIETSLAKLAPSGWTPGVAYDKKADQELMEEDRIEAQKRTERTKKSGFFSYLKMIFGAKWADSKSLGKIPSSDQAIFDRCKKDAGFVPYFIRKMQHSAAKRAFAFGFLLRINQGSDEVPVTLKQLMIYQCAINAGNTILRAHYAFLAMRSGVSLERLVQIADETSTGGGASAAEDAAMAFAQAARYALVRVVA 738
+VGAVPSTVTTADIE LA+ F+ KEQEAVVNA +MGFLNRFMDASGMTLEMEAIETSL KLAPSGW P AYDK AD ELM+EDR EA KR +R K SGFF ++KMIFG K AD++SL KIP+SD A+F +CKKD GFVPY+IR+MQH+ AK+A +FGFLLR+ QGSDEVPV LKQLM YQCA NA N +LRAH+AF+AMRSGV+L RL+Q+ D TSTGGG SAAEDAAMAFAQAA + R+ A
Sbjct: 173 KVGAVPSTVTTADIEMLATTFTRKEQEAVVNACTIMGFLNRFMDASGMTLEMEAIETSLQKLAPSGWVPNDAYDKDADVELMKEDREEAVKREKRKKSSGFFGFVKMIFGGKMADNRSLKKIPTSDSALFSQCKKDGGFVPYYIRQMQHANAKKALSFGFLLRLCQGSDEVPVQLKQLMAYQCATNAENNVLRAHFAFMAMRSGVTLSRLIQVTDITSTGGGDSAAEDAAMAFAQAASWTPTRMTA 418
BLAST of mRNA_M-pyrifera_M_contig13646.6021.1 vs. uniprot
Match: D7FMN7_ECTSI (Probable fusion protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FMN7_ECTSI) HSP 1 Score: 242 bits (618), Expect = 6.770e-75 Identity = 130/247 (52.63%), Postives = 168/247 (68.02%), Query Frame = 1
Query: 1 QVGAVPSTVTTADIEQLASQFSSKEQEAVVNATAVMGFLNRFMDASGMTLEMEAIETSLAKLAPSGWTPGVAYDKKADQELMEEDRIEAQKRTERTKKSGFFSYLKMIFGAKWADSKSLGKIPSSDQAIFDRCKKDAGFVPYFIRKMQHSAAKRAFAFGFLLRINQGSDEVPVTLKQLMIYQCAINAGNTILRAHYAFLAMRSGVSLERLVQIADETSTGGGASAAEDAAMAFAQAARYALVRVVAG 741
++G VPS VT DI +AS ++ KEQE V+N+ VMGFLNRFMD GMTLEME +E + +LAP+GW G +YD +AD ELM EDR+EA KR ER KS F SY+KMI GAK AD SL P+++Q + +C + AGFVPY++ +M+HS A+ AF + F LR+ QGS+EVP LKQLM Y CA NAGNTILRAHYAF+A R+G+ + Q+A T+T + A D + Q A AL +G
Sbjct: 89 KLGPVPSRVTADDIRDMASVYTEKEQEGVINSGVVMGFLNRFMDTIGMTLEMEPLEMGMEQLAPTGWEHGHSYDPEADAELMAEDRVEAVKRAERKSKSNFLSYIKMIIGAKLADRASLKNTPTAEQLVAQKCMELAGFVPYYLVQMKHSQARNAFVWAFTLRLCQGSEEVPAQLKQLMCYICATNAGNTILRAHYAFMAHRNGMPIR---QLATATNTDSSEAVAADDTIDAKQVAAMALAEACSG 332
BLAST of mRNA_M-pyrifera_M_contig13646.6021.1 vs. uniprot
Match: A0A6H5JXG8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXG8_9PHAE) HSP 1 Score: 191 bits (484), Expect = 3.980e-55 Identity = 118/261 (45.21%), Postives = 164/261 (62.84%), Query Frame = 1
Query: 1 QVGAVPSTVTTADIEQLASQFSSKEQEAVVNATAVMGFLNRFM------------DAS-----GMTLEMEAIETSLAKLAPSGWTPGVAYDKKADQELMEEDRIEAQKRTERTKKS-GFFSYLKMIFGAKWADSKSLGKIPSSDQAIFDRCKKDAGFVPYFI---RKMQHSAAKRAFAFGFLLRINQGSDEVPVTLKQLMIYQCAINAGNTILRAHYAFLAMRSGVSLERLVQIADETSTGGGASAAED----AAMAFAQA 708
++GAVP+ VT+ DI+ +A +S+EQE V+NA +MGFLNRFM D S GMTLE+E +ET LA SGWT G+++D + D+ELMEEDR A++R ER K++ G F++LKM+ GAK ADS SL P+S++ + C + AGF PY++ K + + A+ A + F R+ QGS+EVP KQ M Y A +A NTILRAH+AF+A R+GVS+ L A T+ GG ED AA++ A+A
Sbjct: 93 KLGAVPNEVTSDDIQSMARALTSEEQECVINAMVLMGFLNRFMLMMTNDCFCSRMDESPRGTFGMTLELEPLETGNKHLAESGWTAGISFDPEGDEELMEEDRAMAERREERKKQACGGFTFLKMLVGAKMADSASLKGTPTSEKNVKQLCTERAGFAPYYLVGEEKSKMANARNALVWAFTRRLCQGSEEVPAATKQTMGYMLATSADNTILRAHFAFMAHRNGVSVSNL---ASATAEGGDTDGGEDLKKAAALSMARA 350
BLAST of mRNA_M-pyrifera_M_contig13646.6021.1 vs. uniprot
Match: A0A0C2D7D5_9DELT (Uncharacterized protein n=1 Tax=Enhygromyxa salina TaxID=215803 RepID=A0A0C2D7D5_9DELT) HSP 1 Score: 103 bits (257), Expect = 8.110e-22 Identity = 68/195 (34.87%), Postives = 99/195 (50.77%), Query Frame = 1
Query: 49 LASQFSSKEQEAVVNATAVMGFLNRFMDASGMTLEMEAIETSLAKLAPSGWTPGVAYDKKADQELMEEDRIEAQKRTERTKKSGFFSYLKMIFGAKWADSKSLGKIPSSDQAIFDRCKKDAGFVPYFIRKMQHSAAKRAFAFGFLLRINQGSDEVPVTLKQLMIYQCAINAGNTILRAHYAFLAMRSGVSLERLV 633
LA+ FS +++E++V A +MGFLN MD G+ LE + S A LA S WTP YD++ D+EL +EA +T+ G + I G SL I I+ + + GFVP +I + AAKR FA + R++ + LK M + A N +L AH+AF AMRSG ++ L+
Sbjct: 168 LATHFSERDEESIVLAATLMGFLNCAMDTLGVVLEQRLLTQSQAHLAASAWTPNKNYDERYDREL-----VEADAQTDDGDTLGPIELAQTIAGVINYSRTSLSSIEKRADKIYAQVEAALGFVPSYILNVDRIAAKRVFAHVLIERLHTMQGPTAMWLKYAMGFVAARACNNQLLAAHFAFGAMRSGANVGMLL 357
BLAST of mRNA_M-pyrifera_M_contig13646.6021.1 vs. uniprot
Match: A0A2S9YSM1_9DELT (Uncharacterized protein n=1 Tax=Enhygromyxa salina TaxID=215803 RepID=A0A2S9YSM1_9DELT) HSP 1 Score: 96.3 bits (238), Expect = 3.180e-19 Identity = 67/209 (32.06%), Postives = 103/209 (49.28%), Query Frame = 1
Query: 4 VGAVPSTVTTADIEQLASQFSSKEQEAVVNATAVMGFLNRFMDASGMTLEMEAIETSLAKLAPSGWTPGVAYDKKADQELMEEDRIEAQKRTERTKKSGFFSYLKMIFGAKWADSKSLGKIPSSDQAIFDRCKKDAGFVPYFIRKMQHSAAKRAFAFGFLLRINQGSDEVPVTLKQLMIYQCAINAGNTILRAHYAFLAMRSGVSLERL 630
V +P+ VT LA FS +++E+VV A +MGFLN +D G+ LE + S A LA S WTP YD++ D+E+ +EA T+ + + I G SL I I+ + + GFVP ++ ++ + AKR A + R++ + LK M + A + N +L AHYA+ AMRSG ++ L
Sbjct: 153 VAQMPTEVTLDHRLALARHFSERDEESVVLAATLMGFLNCAVDTLGVVLEQRLLTQSQAHLAASAWTPSKNYDERYDREV-----VEADAETDDGETLNPLELAQTIAGVIGYSRASLSTIEKRPDKIYAQVEAALGFVPSYLLRISRTPAKRVLAHLLIERLHTMQGPTGMWLKYAMGFVAAKASHNELLAAHYAYGAMRSGANVGML 356
BLAST of mRNA_M-pyrifera_M_contig13646.6021.1 vs. uniprot
Match: A0A7S1TD96_9RHOD (Hypothetical protein n=2 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TD96_9RHOD) HSP 1 Score: 79.3 bits (194), Expect = 2.700e-13 Identity = 64/216 (29.63%), Postives = 105/216 (48.61%), Query Frame = 1
Query: 4 VGAVPSTVTTADIEQLASQFSSKEQEAVVNATAVMGFLNRFMDASGMTLEMEAIETSLAKLAPSG-------WTPGVAYDKKADQELMEEDRIEAQKRTE-RTKKSGFFSYLK---MIFGAKWADSKSLGKIPSSDQAIFDRCKKDAGFVPYFIRKMQHSAAKRAFAFGFLLRIN-QGSDEVPVTLKQLMIYQCAINAGNTILRAHYAFLAMRSGV 615
+G VP+ VT D +LA FS +E V+ ++VM + RF D G+ LE++ + + L P W PG Y D + +E + +A + + KK G LK M+ + D K+ IP + K++ GF PY++ +++ +RA A + +N + S ++PV LK Y A + ILRAH+ +LA+ SG+
Sbjct: 177 LGQVPTKVTLDDRLRLARVFSRAHEETVILMSSVMALMIRFTDTFGVPLELKTLLLAEQYLQPDDEEVDGLRWNPG-KYISPWDSDRLERELAQALEAGDLERKKEGIRERLKVFGMLARSGLGDEKAKTGIPLMKGRLSVVMKRELGFCPYYLERIRFLFPRRAIAATLVHYLNVESSPQLPVELKYATCYLMANKLNSEILRAHFGYLAIASGM 391
BLAST of mRNA_M-pyrifera_M_contig13646.6021.1 vs. uniprot
Match: D7G5G2_ECTSI (Probable fusion protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5G2_ECTSI) HSP 1 Score: 67.0 bits (162), Expect = 1.330e-9 Identity = 39/87 (44.83%), Postives = 53/87 (60.92%), Query Frame = 1
Query: 130 DASGMTLEMEAIETSLAKLAPSGWTPGVAYDKKADQELMEEDRIEAQKRTERTKKS--GFFSYLKMIFGAKWADSKSLGKIPSSDQA 384
D GMTLE+E +ET LA SGWT G+++D + D+ELMEEDR+ A++R ER K++ GF S I A +A + SD A
Sbjct: 44 DTLGMTLELEPLETGNEHLAESGWTAGISFDPEGDEELMEEDRVMAERREERKKQACGGFTSADNTILRAHFAFMAHRNGVSVSDLA 130
BLAST of mRNA_M-pyrifera_M_contig13646.6021.1 vs. uniprot
Match: A0A504J111_9FLAO (Uncharacterized protein n=1 Tax=Aquimarina algicola TaxID=2589995 RepID=A0A504J111_9FLAO) HSP 1 Score: 57.8 bits (138), Expect = 4.700e-6 Identity = 38/181 (20.99%), Postives = 86/181 (47.51%), Query Frame = 1
Query: 4 VGAVPSTVTTADIEQLASQFSSKEQEAVVNATAVMGFLNRFMDASGMTLEMEAIETSLAKLAPSGWTPGVAYDKKADQELMEEDRIEAQKRTERTKKSGFFSYLKMIF---GAKWADSKSLGKIPSSDQAIFDRCKKDAGFVPYFIRKMQHSAAKRAFAFGFLLRINQGSDEVPVTLKQLM 537
+ ++P T+T S+KE E +V + +MGFLN+FMDA+G+T+E +++ L+ GW PG ++ D ++ I ++ F ++L+++ G + + K +P S +K G+ ++ +++ +A + +++ + ++ + +K L+
Sbjct: 132 LSSIPVTLTKERYNDFRKHLSAKEIERIVYSIGLMGFLNKFMDATGITIEQNSLQDVGKLLSSDGWQPGKHFEGSFDASEIQSKPI---------RQDSFMTFLRVLKHAPGVVFLEKKWTRGVPGSYARAKVYLQKHTGYTFPILKNIKNRKILKAITTVIKINLDKETTQLGLRVKYLL 303 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig13646.6021.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 8
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig13646.6021.1 >prot_M-pyrifera_M_contig13646.6021.1 ID=prot_M-pyrifera_M_contig13646.6021.1|Name=mRNA_M-pyrifera_M_contig13646.6021.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=248bp QVGAVPSTVTTADIEQLASQFSSKEQEAVVNATAVMGFLNRFMDASGMTLback to top mRNA from alignment at M-pyrifera_M_contig13646:1602..8624+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig13646.6021.1 ID=mRNA_M-pyrifera_M_contig13646.6021.1|Name=mRNA_M-pyrifera_M_contig13646.6021.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=7023bp|location=Sequence derived from alignment at M-pyrifera_M_contig13646:1602..8624+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig13646:1602..8624+ >mRNA_M-pyrifera_M_contig13646.6021.1 ID=mRNA_M-pyrifera_M_contig13646.6021.1|Name=mRNA_M-pyrifera_M_contig13646.6021.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1488bp|location=Sequence derived from alignment at M-pyrifera_M_contig13646:1602..8624+ (Macrocystis pyrifera P11B4 male)back to top |