mRNA_M-pyrifera_M_contig13640.6020.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig13640.6020.1 vs. uniprot
Match: D8LLL5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLL5_ECTSI) HSP 1 Score: 150 bits (380), Expect = 3.400e-42 Identity = 74/103 (71.84%), Postives = 88/103 (85.44%), Query Frame = 2
Query: 5 QKAKAFLRSYSGRSVRTLCALCVTNLESGRKAEGVHESNVYWREIPPGIVDAVVRRGTVMGSAGGFAVEDPDLRLLVDRIEGSFDSVLGLPVDLLCDLMKGAS 313
++AKAFLRSYS RSV+TL ALCVTNL++GR AEGVHES V WREI P +VD V+ RG VMGSAGGFA+E+P LR LVD+IEGS DSVLGLPV+LLC L++ A+
Sbjct: 127 EEAKAFLRSYSCRSVKTLSALCVTNLDNGRAAEGVHESTVAWREISPAVVDDVIARGNVMGSAGGFALEEPGLRSLVDKIEGSVDSVLGLPVELLCTLVERAT 229
BLAST of mRNA_M-pyrifera_M_contig13640.6020.1 vs. uniprot
Match: A0A7S2XZD4_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XZD4_9STRA) HSP 1 Score: 105 bits (263), Expect = 5.360e-25 Identity = 52/98 (53.06%), Postives = 70/98 (71.43%), Query Frame = 2
Query: 8 KAKAFLRSYSGRSVRTLCALCVTNLESGRKAEGVHESNVYWREIPPGIVDAVVRRGTVMGSAGGFAVEDPDLRLLVDRIEGSFDSVLGLPVDLLCDLM 301
+A+A+L SYSG SV T+ + VTN SG+ AEGV + V+W I P +++ VV RG +M SAGGF +ED DL LV I+G+ DSVLGLP+ L+CDL+
Sbjct: 105 QARAYLSSYSGNSVSTVSGVMVTNTGSGKSAEGVDVATVHWDTISPEVIERVVARGEIMTSAGGFRIEDVDLSPLVKNIQGTKDSVLGLPLALVCDLI 202
BLAST of mRNA_M-pyrifera_M_contig13640.6020.1 vs. uniprot
Match: A0A1G2MS12_9BACT (7-methyl-GTP pyrophosphatase n=1 Tax=Candidatus Taylorbacteria bacterium RIFCSPHIGHO2_02_FULL_46_13 TaxID=1802312 RepID=A0A1G2MS12_9BACT) HSP 1 Score: 78.2 bits (191), Expect = 1.450e-14 Identity = 41/100 (41.00%), Postives = 61/100 (61.00%), Query Frame = 2
Query: 5 QKAKAFLRSYSGRSVRTLCALCVTNLESGRKAEGVHESNVYWREIPPGIVDAVVRRGTVMGSAGGFAVEDPDLRLLVDRIEGSFDSVLGLPVDLLCDLMK 304
++A FL SY T A+ VTN +G+ A GV + VY++ IP I+D VV++G + +AGG +ED L ++RI+G+ DS+ GLP LL LM+
Sbjct: 86 KEAGYFLESYCEHPAETHSAVMVTNTANGKHAMGVDVARVYFKNIPKEIIDEVVKKGAIYTTAGGIQMEDALLAPYIERIDGTVDSLKGLPKALLTKLME 185
BLAST of mRNA_M-pyrifera_M_contig13640.6020.1 vs. uniprot
Match: A0A7S3XYP5_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XYP5_HETAK) HSP 1 Score: 75.9 bits (185), Expect = 1.480e-14 Identity = 35/87 (40.23%), Postives = 56/87 (64.37%), Query Frame = 2
Query: 44 SVRTLCALCVTNLESGRKAEGVHESNVYWREIPPGIVDAVVRRGTVMGSAGGFAVEDPDLRLLVDRIEGSFDSVLGLPVDLLCDLMK 304
SV+T+C + V + +GR A G + ++W EIP ++ V+ RG + SAGGF +EDP L V R+EG+ +S+ GLP+ L+ L++
Sbjct: 2 SVQTICGVAVRHTGTGRVAVGHDVAEIFWEEIPEEVMAGVIGRGEIFSSAGGFRMEDPALAPFVRRVEGTPESIQGLPLHLVEQLVQ 88
BLAST of mRNA_M-pyrifera_M_contig13640.6020.1 vs. uniprot
Match: A0A7S1F3R5_NOCSC (Hypothetical protein n=1 Tax=Noctiluca scintillans TaxID=2966 RepID=A0A7S1F3R5_NOCSC) HSP 1 Score: 80.5 bits (197), Expect = 3.060e-14 Identity = 41/113 (36.28%), Postives = 65/113 (57.52%), Query Frame = 2
Query: 5 QKAKAFLRSYS-GRSVRTLCALCVTNLESGRKAEGVHESNVYWREIPPGIVDAVVRRGTVMGSAGGFAVEDPDLRLLVDRIEGSFDSVLGLPVDLLCDLMKGASS*ALVF*LF 340
Q+A+A+L SY G + L N +G++ V + +YWR P +VD ++ G + AG F VEDP+LR +DR EGS DS++GLPV L ++++ ++ + LF
Sbjct: 116 QQARAYLASYQRGAGASCVNGLVAHNTRTGKRVTEVDIATLYWRPFPDSVVDHLLSNGEIFTCAGAFNVEDPELRPYLDRTEGSIDSIVGLPVKTLREMLRRVAAPPVTHVLF 228
BLAST of mRNA_M-pyrifera_M_contig13640.6020.1 vs. uniprot
Match: B9PNA8_TOXGV (Maf family protein n=15 Tax=Toxoplasma gondii TaxID=5811 RepID=B9PNA8_TOXGV) HSP 1 Score: 76.3 bits (186), Expect = 2.820e-13 Identity = 42/105 (40.00%), Postives = 65/105 (61.90%), Query Frame = 2
Query: 2 RQKAKAFLRSYSGRS--VRTLCALCVTNLESGRKAEGVHESNVYWREIPPGIVDAVVRRGTVMGSAGGFAVEDPDLRLLVDRIEGSFDSVLGLPVDLLCDLMKGA 310
R++A+AFLR YSG S + A+ + N S + E V ++ V++R +P + A++ G VM SAGG V+D + VDRIEGS D ++GLP+ ++ L+K A
Sbjct: 140 REEAEAFLRDYSGSSEPAHIIVAVVLVNTYSKMRLEYVDKAMVWFRHMPDAAIKAILDDGMVMTSAGGLVVDDDIMSTYVDRIEGSRDCLMGLPMAVVSQLIKEA 244
BLAST of mRNA_M-pyrifera_M_contig13640.6020.1 vs. uniprot
Match: A0A1F7VCJ6_9BACT (Nucleoside triphosphate pyrophosphatase n=1 Tax=Candidatus Uhrbacteria bacterium RIFCSPLOWO2_02_FULL_48_18 TaxID=1802408 RepID=A0A1F7VCJ6_9BACT) HSP 1 Score: 74.7 bits (182), Expect = 3.200e-13 Identity = 35/84 (41.67%), Postives = 52/84 (61.90%), Query Frame = 2
Query: 53 TLCALCVTNLESGRKAEGVHESNVYWREIPPGIVDAVVRRGTVMGSAGGFAVEDPDLRLLVDRIEGSFDSVLGLPVDLLCDLMK 304
T A+CV N +G + GV + VY+ IP ++D ++ G V+ S+G F V DP + VD IEG+ DS+ GLP+DL+ L+K
Sbjct: 102 TATAVCVANTSTGERVCGVDFAKVYFSSIPDDLIDRLIADGRVLISSGSFIVNDPIIDAYVDHIEGTLDSIEGLPLDLVQSLLK 185
BLAST of mRNA_M-pyrifera_M_contig13640.6020.1 vs. uniprot
Match: A0A837IKZ0_9BACT (Uncharacterized protein n=4 Tax=Parcubacteria group TaxID=1794811 RepID=A0A837IKZ0_9BACT) HSP 1 Score: 73.9 bits (180), Expect = 4.440e-13 Identity = 35/100 (35.00%), Postives = 60/100 (60.00%), Query Frame = 2
Query: 5 QKAKAFLRSYSGRSVRTLCALCVTNLESGRKAEGVHESNVYWREIPPGIVDAVVRRGTVMGSAGGFAVEDPDLRLLVDRIEGSFDSVLGLPVDLLCDLMK 304
++AK FLR+Y + + V N +G++A V S VY++EIP ++ + + AGGFA+ DP L+ ++++EG+ DSV+GLP +L L++
Sbjct: 72 EEAKEFLRTYYQAPAEVINGIVVVNTGTGKRASAVDSSRVYFKEIPTDALEQFAKLEHIYRRAGGFAIRDPLLQPYIEKVEGTDDSVMGLPKELTKQLIR 171
BLAST of mRNA_M-pyrifera_M_contig13640.6020.1 vs. uniprot
Match: A0A1F5PKW2_9BACT (Nucleoside triphosphate pyrophosphatase n=1 Tax=Candidatus Doudnabacteria bacterium RIFCSPHIGHO2_12_FULL_48_16 TaxID=1817838 RepID=A0A1F5PKW2_9BACT) HSP 1 Score: 73.6 bits (179), Expect = 8.210e-13 Identity = 32/99 (32.32%), Postives = 60/99 (60.61%), Query Frame = 2
Query: 8 KAKAFLRSYSGRSVRTLCALCVTNLESGRKAEGVHESNVYWREIPPGIVDAVVRRGTVMGSAGGFAVEDPDLRLLVDRIEGSFDSVLGLPVDLLCDLMK 304
+A+ L SY + +C + VTN ++G+ A+G+ + VY+ +IP ++D +V+ G V+ AG F ++DP ++ + I+G +V+GLP L L++
Sbjct: 87 EARRMLESYGAKPAEVICGVVVTNTKTGKTAQGLDSTKVYFHKIPAKLIDEMVKLGRVLDFAGAFHLDDPPIKPYIVHIDGELGTVMGLPRILTKQLIE 185
BLAST of mRNA_M-pyrifera_M_contig13640.6020.1 vs. uniprot
Match: A0A4Y7K367_PAPSO (Uncharacterized protein n=1 Tax=Papaver somniferum TaxID=3469 RepID=A0A4Y7K367_PAPSO) HSP 1 Score: 71.2 bits (173), Expect = 2.330e-12 Identity = 33/95 (34.74%), Postives = 59/95 (62.11%), Query Frame = 2
Query: 2 RQKAKAFLRSYSGRSVRTLCALCVTNLESGRKAEGVHESNVYWREIPPGIVDAVVRRGTVMGSAGGFAVEDPDLRLLVDRIEGSFDSVLGLPVDL 286
+++A+ F++ YSG T+ ++ VTNL +G + +Y+REIP +++ +V G V+ AGG +E P + ++++EG+ DSV+GLP L
Sbjct: 40 KEEARQFIKGYSGGRAATVGSVLVTNLTTGTRRGEWDRVEIYFREIPDEVIEKLVDEGVVLYVAGGLIIEHPLILPFIEKVEGTTDSVMGLPKAL 134 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig13640.6020.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig13640.6020.1 >prot_M-pyrifera_M_contig13640.6020.1 ID=prot_M-pyrifera_M_contig13640.6020.1|Name=mRNA_M-pyrifera_M_contig13640.6020.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=124bp APKGEGVPQELLRPVGANTVRPLRDEPRERAEGRGSARVKRLLAGDTARNback to top mRNA from alignment at M-pyrifera_M_contig13640:7495..8557- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig13640.6020.1 ID=mRNA_M-pyrifera_M_contig13640.6020.1|Name=mRNA_M-pyrifera_M_contig13640.6020.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=1063bp|location=Sequence derived from alignment at M-pyrifera_M_contig13640:7495..8557- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig13640:7495..8557- >mRNA_M-pyrifera_M_contig13640.6020.1 ID=mRNA_M-pyrifera_M_contig13640.6020.1|Name=mRNA_M-pyrifera_M_contig13640.6020.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=744bp|location=Sequence derived from alignment at M-pyrifera_M_contig13640:7495..8557- (Macrocystis pyrifera P11B4 male)back to top |