mRNA_M-pyrifera_M_contig1357.6000.1 (mRNA) Macrocystis pyrifera P11B4 male
|
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig1357.6000.1 vs. uniprot
Match: D7G5S6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G5S6_ECTSI) HSP 1 Score: 309 bits (792), Expect = 3.260e-105 Identity = 156/179 (87.15%), Postives = 162/179 (90.50%), Query Frame = 1
Query: 25 MVDGGSYITIGDMYKGNKIVLPDRWKGKGLSVPQLPKNAENGHFSRLEYRSEPYADMEKFSKTQPLDKRKLGFGTKDAFRPGEFTATIRTEQYRDLLRAEKAIMEKHRDTEKEHAAAEKYEKGFKEQRTFPGGLKEIKHLYDV-----TEFDPKNSRDRFYTLSTGPEKRRGPYRTMAQ 546
MVDGGSYI+IGDMYKGNKI+LPDRWKGKGLSVPQLPKNAENG+FSRLEYRSEPYADMEKFSKTQPLDKRKLGFGTKDAFRPGEFTATIRTEQYRDLLRAEK IMEKHRD K+ AAA+KYEK E R FP GLKEI+HLYDV TEFDPKNSRDRFYTLS G EKRRGPYRTMAQ
Sbjct: 1 MVDGGSYISIGDMYKGNKIILPDRWKGKGLSVPQLPKNAENGNFSRLEYRSEPYADMEKFSKTQPLDKRKLGFGTKDAFRPGEFTATIRTEQYRDLLRAEKNIMEKHRDPAKDQAAAQKYEKDCAEHRAFPDGLKEIEHLYDVGRSQVTEFDPKNSRDRFYTLSIGQEKRRGPYRTMAQ 179
BLAST of mRNA_M-pyrifera_M_contig1357.6000.1 vs. uniprot
Match: A0A836CAI9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAI9_9STRA) HSP 1 Score: 186 bits (471), Expect = 2.450e-56 Identity = 103/184 (55.98%), Postives = 127/184 (69.02%), Query Frame = 1
Query: 10 RLNKNMVDGGSYITIGDMYKGNKIVLPDRWKGKGLSVPQLPKNAENGHFSRLEYRSEPYADMEKFSKTQPLDKRKLGFGTKDAFRPGEFTATIRTEQYRDLLRAEKAIMEKHRDTEKEHAAAEKYEKGFKEQRTFPGGLKEIKHLYDV-----TEFDPKNSRDRFYTLSTGPEKRRGPYRTMAQ 546
R+N + +G YI++GD Y+G K LP RWKGKG V Q+P NAENG+FS+LEY+S + +ME++SKTQP RK GFGTKDAFR GEFTATIRTEQYRD LR E+ IM K D ++ + E+ + RTF GL E HLYDV T+FDPK+SRDRFYT E+R G +RTMAQ
Sbjct: 6 RVNDKIAEG--YISVGDPYRGTKDTLPGRWKGKGFKVLQVPVNAENGNFSKLEYKSCAFQEMERYSKTQP--DRKKGFGTKDAFRRGEFTATIRTEQYRDQLRKEQTIMAKFCDPVRDSEIIRRAEEKQRSTRTFCEGLPETDHLYDVGRTQVTKFDPKHSRDRFYTPDINRERRMGGFRTMAQ 185
BLAST of mRNA_M-pyrifera_M_contig1357.6000.1 vs. uniprot
Match: D7FNL0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNL0_ECTSI) HSP 1 Score: 175 bits (444), Expect = 4.680e-52 Identity = 92/184 (50.00%), Postives = 120/184 (65.22%), Query Frame = 1
Query: 10 RLNKNMVDGGSYITIGDMYKGNKIVLPDRWKGKGLSVPQLPKNAENGHFSRLEYRSEPYADMEKFSKTQPLDKRKLGFGTKDAFRPGEFTATIRTEQYRDLLRAEKAIMEKHRDTEKEHAAAEKYEKGFKEQRTFPGGLKEIKHLYDV-----TEFDPKNSRDRFYTLSTGPEKRRGPYRTMAQ 546
R+NKN+V+G +I++GD YK + LP RWKGK P NA+NG+F++L+Y SEP+ + E+F+KTQPL KR LGFGTKDAF+ GEFTATIRT+QYR++LR E+ +M R+ + E + + R F G +EIKHLYDV EF+P D FY KR GPYRTMAQ
Sbjct: 6 RVNKNIVEGNRFISVGDPYKELRR-LPGRWKGKQFQTEGCPANADNGNFAKLKYSSEPFQETERFTKTQPLSKRNLGFGTKDAFKRGEFTATIRTQQYREMLRQEQRLMNASRNVKDEREKVAQAKAKHASSRRFVEGKEEIKHLYDVGRSLQNEFNPYRKHDAFYDFQKSTGKRMGPYRTMAQ 188
BLAST of mRNA_M-pyrifera_M_contig1357.6000.1 vs. uniprot
Match: A0A6V1R9I1_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1R9I1_HETAK) HSP 1 Score: 152 bits (383), Expect = 5.030e-43 Identity = 89/183 (48.63%), Postives = 114/183 (62.30%), Query Frame = 1
Query: 10 RLNKNMVDGGSYITIGDMYKGNKIVLPDRWKGKGLSVPQLPKNAENGHFSRLEYRSEPYADMEKFSKTQPLDKRKLGFGTKDAFRPGEFTATIRTEQYRDLLRAEKAIMEKHRDTEKEHAAAEKYEKGFKEQRTFPGGLKEIKHLYD-----VTEFDPKNSRDRFYTLSTGPEKRRGPYRTMA 543
R+NKN +D SYI+I D Y N+ LP RWK K +V LP G+F++ Y +PY + F K QP D RKLGFGTKDA + GEFTATIRTEQYR+ L+ E+ I++ RD E E+ K +E+R+FP GL E + LYD VT+FDP+ SRD FYTL KR G ++T A
Sbjct: 6 RINKNKIDV-SYISIQDPYVENRK-LPPRWKEKQFAVAHLPNPENGGYFAKKTYAPDPYKEAVHFIKEQPADSRKLGFGTKDASKRGEFTATIRTEQYRETLKKEQRILDHQRDPAAETMTLERARKR-EEERSFPEGLSETRRLYDIGRQNVTDFDPRQSRDTFYTLRKDRPKRLGHHQTAA 185
BLAST of mRNA_M-pyrifera_M_contig1357.6000.1 vs. uniprot
Match: A0A7S2XZN8_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XZN8_9STRA) HSP 1 Score: 151 bits (381), Expect = 1.060e-42 Identity = 88/189 (46.56%), Postives = 114/189 (60.32%), Query Frame = 1
Query: 7 HRLNKNMVD-GGSYITIGDMYKGNKIVLPDRWKGKGLSVPQLPKNAENGHFSRLEYRSEPYADMEKFSKTQPLDKRKLGFGTKDAFRPGEFTATIRTEQYRDLLRAEKAIMEKHRDTEKEH---AAAEKYEKGFKEQRTFPGGLKEIKHLYD-----VTEFDPKNSRDRFYTLSTGPEKRRGPYRTMAQ 546
HR +KN++D SY+TIGD Y +P RWK K V P ++G+F +Y+ E Y +ME + K+QP D+RK GFG+ DA R GEFT+TIRTEQYR+ L+ E + EK RD E E A A + E G RTF GL E +HLYD VTEFDP++SRD FY + KR G + T +Q
Sbjct: 5 HRTHKNLLDKDASYVTIGDPYIDPNRTIPPRWKEKQFVVQHKPALKQSGYFEEFKYQPEEYKEMESYLKSQPQDRRKNGFGSHDATRRGEFTSTIRTEQYRETLKQELRVHEKQRDPESERKVMAIAAEREMG----RTFTEGLTETRHLYDIGKKQVTEFDPRSSRDTFYVMRKDRPKRLGAHTTSSQ 189
BLAST of mRNA_M-pyrifera_M_contig1357.6000.1 vs. uniprot
Match: F0YHZ6_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YHZ6_AURAN) HSP 1 Score: 142 bits (358), Expect = 3.550e-39 Identity = 92/190 (48.42%), Postives = 111/190 (58.42%), Query Frame = 1
Query: 13 LNKNM-VDGGSYITIGDMYKGNKIVLPDRWKGKGLSVPQLPKNAENGHFS----RLEYRSEPYADMEKFSKTQPLDKRKLGFGTKDAFRPGEFTATIRTEQYRDLLRAEKAIMEKHRDTEKEHAAAEKYEKGFKEQRTFPGGLKEIKHLYDV-----TEFDPKNSRDRFYTLSTGP--EKRRGPYRTMAQ 546
+NKN+ VD G YIT+GD Y G K LP RWK K VPQ+P NA G+F Y+SE Y + + KTQP DKRKLGFGT DA R EF+ TIRTEQYR+ L+ E D E A E +K + + F KEI +LYDV TEFDPKN RD+FY++ G EKR G RT +Q
Sbjct: 7 MNKNVTVDNGRYITVGDPYIGTKDKLPLRWKEKQFHVPQVPSNAGEGYFGFSGKAFSYQSELYTEQRPYMKTQPPDKRKLGFGTHDASRRDEFSQTIRTEQYRETLKKEGRANNNGYD---EDAIEELMKKENAKVKKFVETKKEIGNLYDVGRSIHTEFDPKNGRDQFYSMKHGYTYEKRMGNNRTASQ 193
BLAST of mRNA_M-pyrifera_M_contig1357.6000.1 vs. uniprot
Match: A0A8K1FR81_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FR81_PYTOL) HSP 1 Score: 127 bits (318), Expect = 3.390e-33 Identity = 78/173 (45.09%), Postives = 104/173 (60.12%), Query Frame = 1
Query: 13 LNKNMVDGGSYITIGDMYKGNKIVLPDRWKGKGLSVPQLP-KNAENG--HFSRLEYRSEPYADMEKFSKTQPLDKRKLGFGTKDAFRPGEFTATIRTEQYRDLLRAEKAIMEKHRDTEKEHAAAEKYEKGFKEQRTFPGGLKEIKHLYDV-----TEFDPKNSRDRFYTLSTG 507
LNKN+ GSY+TIGD Y+ ++ + KG + +P KN NG +F + Y S+P D + KTQP+DKRK GFG+KDA R EF + +RTEQYR+ L E I++K + E E+ E +EQRTFP GL E K LYD+ TEF+ K+ RD FYT+ TG
Sbjct: 7 LNKNIA--GSYLTIGDPYRDPHLIDGKGPRHKGKQMTTIPAKNTCNGIGYFEKKTYSSDPLQDTTMYLKTQPMDKRKSGFGSKDASRREEFMSHVRTEQYRETLTKEMEIVDKQKKALSEEGRFEELE-ALEEQRTFPEGLTETKFLYDIGRTQNTEFNQKSHRDTFYTMRTG 176
BLAST of mRNA_M-pyrifera_M_contig1357.6000.1 vs. uniprot
Match: A0A7S2EF12_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EF12_TRICV) HSP 1 Score: 123 bits (308), Expect = 1.510e-31 Identity = 71/164 (43.29%), Postives = 101/164 (61.59%), Query Frame = 1
Query: 40 SYITIGDMYKGNKIVLPDRWKGKGLSVPQLPKNAENGHFSRLEYRSEPYADM-EKFSKTQPLDKRKLGFGTKDAFRPGEFTATIRTEQYRDLLRAEKAIMEKHRDTEKEHAAAEKYEKGFKEQRTFPGG-----LKEIKHLYDV-----TEFDPKNSRDRFYTL 498
+Y +IGD Y+ + LP RWK K P+ PKNA NG F + +Y +PY + E++SKTQPL+KR+LGFG+ DAF+PGEFT+ TE+YR+++R E+ +++ RD +E +K RT P LKE K LYDV T + P+++RD FY L
Sbjct: 18 TYTSIGDPYRNSVEELPSRWKKKQFVTPKCPKNAYNGLFVKPQYTPDPYTERAEQYSKTQPLEKRRLGFGSHDAFKPGEFTSDKATERYRNVVRQEQKLLDSVRDEMRERELIQKLRD---RPRTTPKDKLGKDLKEPKFLYDVGRTHVTLYSPQSTRDSFYKL 178
BLAST of mRNA_M-pyrifera_M_contig1357.6000.1 vs. uniprot
Match: A0A8J2SVQ1_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SVQ1_9STRA) HSP 1 Score: 122 bits (305), Expect = 8.020e-31 Identity = 79/192 (41.15%), Postives = 103/192 (53.65%), Query Frame = 1
Query: 31 DGGSYITIGDMYKGNKIVLPDRWKGKGLSVPQLPKNAENGHFSRLE----YRSEPYADMEKFSKTQPLDKRKLGFGTKDAFRPGEFTATIRTEQYRDLLRAEKAIMEKHRDTEKEHAAAEKYEKGFK---------EQRTFPGGLKEIKHLYDV-----TEFDPKNSRDRFYTL--STGPEKRRGPYRTMAQ 546
+ G YI+IGD Y LP RWK K + PKNA NG+F + Y + Y + ++KTQP D RKLGFGT DA + EFT +RTEQYRDLL+ EK I++ R+ +K AE+ K K E++ GL LYD+ T+FDPK D FY + E RRG YR+M+Q
Sbjct: 43 EAGRYISIGDPYVDEAERLPARWKEKQMGTTMYPKNAGNGYFGNMGKPFMYMPDKYVEQLPYAKTQPYDTRKLGFGTHDASKRDEFTDRVRTEQYRDLLKREKRILQ--RNEQKRGGLAEQIRKAHKKLAEAAVEEERQREVCGLSAAPFLYDIGRSRETQFDPKTKTDCFYNAYQARKREMRRGGYRSMSQ 232
BLAST of mRNA_M-pyrifera_M_contig1357.6000.1 vs. uniprot
Match: K3WQ34_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WQ34_GLOUD) HSP 1 Score: 117 bits (292), Expect = 2.360e-29 Identity = 74/175 (42.29%), Postives = 104/175 (59.43%), Query Frame = 1
Query: 13 LNKNMVDGGSYITIGDMYKGNKIVLPDRWKGKGLSVPQLP-KNAENG--HFSRLEYRSEPYADMEKFSKTQPLDKRKLGFGTKDAFRPGEFTATIRTEQYRDLLRAEKAIMEKHRDTEKEHAAAEKYEK--GFKEQRTFPGGLKEIKHLYDV-----TEFDPKNSRDRFYTLSTG 507
LNK++ SY+TIGD Y+ ++ + KG + +P KN NG +F R Y S+P D + KTQP+DKRK GFG+KDA R EF + +RTEQYR+ L E I+EK +K++ A +E+ + R FP GL+E K+LYD+ TEF+ K+ RD FYT+ G
Sbjct: 7 LNKSIAK--SYLTIGDPYRDPHVIEGKNSRHKGKQLMTVPAKNTCNGVGYFERKTYSSDPLQDNTMYLKTQPMDKRKAGFGSKDASRRDEFMSHVRTEQYRETLDTEMQILEK----QKKNEPAYDFEELDALSKARKFPEGLEETKYLYDIGRSQTTEFNQKSHRDTFYTMRVG 175 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig1357.6000.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 18
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig1357.6000.1 >prot_M-pyrifera_M_contig1357.6000.1 ID=prot_M-pyrifera_M_contig1357.6000.1|Name=mRNA_M-pyrifera_M_contig1357.6000.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=182bp MLHRLNKNMVDGGSYITIGDMYKGNKIVLPDRWKGKGLSVPQLPKNAENGback to top mRNA from alignment at M-pyrifera_M_contig1357:11862..17053- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig1357.6000.1 ID=mRNA_M-pyrifera_M_contig1357.6000.1|Name=mRNA_M-pyrifera_M_contig1357.6000.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=5192bp|location=Sequence derived from alignment at M-pyrifera_M_contig1357:11862..17053- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig1357:11862..17053- >mRNA_M-pyrifera_M_contig1357.6000.1 ID=mRNA_M-pyrifera_M_contig1357.6000.1|Name=mRNA_M-pyrifera_M_contig1357.6000.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1092bp|location=Sequence derived from alignment at M-pyrifera_M_contig1357:11862..17053- (Macrocystis pyrifera P11B4 male)back to top |