mRNA_M-pyrifera_M_contig13524.5983.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig13524.5983.1 vs. uniprot
Match: D7G1C0_ECTSI (Lissencephaly-1 homolog n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1C0_ECTSI) HSP 1 Score: 224 bits (572), Expect = 1.140e-68 Identity = 114/146 (78.08%), Postives = 128/146 (87.67%), Query Frame = 1
Query: 1 HCRHVGVLEYMRSQGEAFDEAAEAFASATGLEDSSGNEGAKGLLEKKWTSVVRLQRKVMDLEARLEQAQQDLRSGLRPGRDKGGXXXXXXSDRILPRAPAKSVLAGHRSPVTCVALHPLYSIVASSSEDATIKVWDYETGECERTL 438
H HVG+LEYM+ QGE F +AA AFA ATGLED++GNE +GLLEKKWTSVVRLQRKVMDLEARL+QAQQDL+SG+RPGR+KG SDR+LPRAPAK VL GHR+PVTCVALHPLYS+VASSSEDAT+KVWDYETGECERTL
Sbjct: 9 HDMHVGMLEYMKGQGEDFADAAAAFAVATGLEDATGNESFRGLLEKKWTSVVRLQRKVMDLEARLDQAQQDLKSGVRPGREKGAGG----SDRVLPRAPAKGVLTGHRNPVTCVALHPLYSVVASSSEDATVKVWDYETGECERTL 150
BLAST of mRNA_M-pyrifera_M_contig13524.5983.1 vs. uniprot
Match: A0A418AZ71_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A418AZ71_9STRA) HSP 1 Score: 164 bits (415), Expect = 1.070e-47 Identity = 89/166 (53.61%), Postives = 115/166 (69.28%), Query Frame = 1
Query: 10 HVGVLEYMRSQGEAFDEAAEAFASATGLEDSSGNEGAK-GLLEKKWTSVVRLQRKVMDLEARLEQAQQDLR-SGLRPGRDKGGXXXXXXSDRILPRAPAKSVLAGHRSPVTCVALHPLYSIVASSSEDATIKVWDYETGECERTLKGHTNVVQSVTFSPDGQALAS 501
H +LEY+ G F ++A AF GL + ++ K GLLEKKWTSVVRLQRKVM+LE++++Q ++D + G+ RD G S LPRAP K ++GHRSP+TCV HP++S+V +SSEDATIKVWD+ETGE ERTLKGHTN VQSV F+P G L +
Sbjct: 12 HQAILEYLSGLGSTFAQSASAFQQDAGLMMTGESDTTKTGLLEKKWTSVVRLQRKVMELESKIQQLEEDAKLGGVVSRRDVIGIGHDASS--FLPRAPPKHSMSGHRSPITCVVFHPVFSVVVTSSEDATIKVWDFETGEFERTLKGHTNAVQSVAFNPTGTLLGT 175
BLAST of mRNA_M-pyrifera_M_contig13524.5983.1 vs. uniprot
Match: H2YVD8_CIOSA (LisH domain-containing protein n=1 Tax=Ciona savignyi TaxID=51511 RepID=H2YVD8_CIOSA) HSP 1 Score: 152 bits (384), Expect = 1.860e-43 Identity = 82/165 (49.70%), Postives = 109/165 (66.06%), Query Frame = 1
Query: 10 HVGVLEYMRSQGEAFDEAAEAFASATGLEDSSGNEGAKGLLEKKWTSVVRLQRKVMDLEARLEQAQQDLRSGLRPGRDKGGXXXXXXSDRILPRAPAKSVLAGHRSPVTCVALHPLYSIVASSSEDATIKVWDYETGECERTLKGHTNVVQSVTFSPDGQALASC 504
++ + EY+RS G + +A EAF L D + GL+EKKWTSVVRLQRKVMDLEA+L + ++ R G+ P K +PR P + L+GHRSP+T V HP+Y +V S++ED+TIKVWDYETG+ ERTLKGHT+ VQ ++F P G+ LASC
Sbjct: 12 NLAISEYLRSNG--YSKALEAFKEEADLSDQVDKK-YDGLMEKKWTSVVRLQRKVMDLEAKLNELTKETRDGITPQHKKD-------PSEWIPRPPERYALSGHRSPITRVIFHPVYGLVLSAAEDSTIKVWDYETGDFERTLKGHTDSVQDISFDPTGKILASC 166
BLAST of mRNA_M-pyrifera_M_contig13524.5983.1 vs. uniprot
Match: A0A3R7BSP6_9STRA (Uncharacterized protein n=4 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R7BSP6_9STRA) HSP 1 Score: 155 bits (391), Expect = 4.780e-43 Identity = 84/174 (48.28%), Postives = 117/174 (67.24%), Query Frame = 1
Query: 7 RHVGVLEYMRSQGEAFDEAAEAFASATGLEDSSGNEGAK-GLLEKKWTSVVRLQRKVMDLEARLEQAQQDLR-SGLRPGRDKGGXXXXXXSDRILPRAPAKSVLAGHRSPVTCVALHPLYSIVASSSEDATIKVWDYETGECERTLKGHTNVVQSVTFSPDGQALASCGADTTI 522
RH +LEY+ G F ++A AF GL + ++ K GLLEKKWTSVVRLQRKVM+LE++++Q ++D + G+ RD G + LPRAP K ++GHRSP+TCV HP++S+V +SSEDATIK+W+ E+G C +TLKGH++ V+ + + DGQ LAS G D I
Sbjct: 7 RHQAILEYLSGLGSTFAQSATAFQQDAGLTMAGESDTTKTGLLEKKWTSVVRLQRKVMELESKIQQLEEDSKLGGVVSRRDVTGIGRDPST--FLPRAPPKYSMSGHRSPITCVVFHPVFSVVVTSSEDATIKIWEVESGYCTQTLKGHSDWVRDICITDDGQFLASGGNDRAI 178
BLAST of mRNA_M-pyrifera_M_contig13524.5983.1 vs. uniprot
Match: A0A183HCR9_9BILA (LisH domain-containing protein n=1 Tax=Onchocerca flexuosa TaxID=387005 RepID=A0A183HCR9_9BILA) HSP 1 Score: 142 bits (359), Expect = 4.090e-40 Identity = 80/159 (50.31%), Postives = 110/159 (69.18%), Query Frame = 1
Query: 19 VLEYMRSQGEAFDEAAEAFASATGLEDSSGNEGAKGLLEKKWTSVVRLQRKVMDLEARLEQAQQDLRSGLRPGRDKGGXXXXXXSDRILPRAPAKSVLAGHRSPVTCVALHPLYSIVASSSEDATIKVWDYETGECERTLKGHTNVVQSVTFSPDGQAL 495
+ +Y++S G ++E+ +AF TGL ++ + GLLEKKWTSVVRLQ+KVMDLEA+L++A+++ G P R+K +PR P K L GHRSP+T V HP+YSI+ASSSED+TIKVWD+ETG+ ER+LKGHT+ VQ + F G+ L
Sbjct: 17 IADYLQSYG--YNESFDAFRRETGLMENDDKK-VMGLLEKKWTSVVRLQKKVMDLEAKLQEAEREYIHGA-PTREK------RQPGEWIPRPPEKFCLNGHRSPITRVIFHPVYSIIASSSEDSTIKVWDFETGDFERSLKGHTDAVQDIAFDNSGKLL 165
BLAST of mRNA_M-pyrifera_M_contig13524.5983.1 vs. uniprot
Match: A0A482WL60_LAOST (LisH domain-containing protein n=1 Tax=Laodelphax striatellus TaxID=195883 RepID=A0A482WL60_LAOST) HSP 1 Score: 141 bits (355), Expect = 1.970e-39 Identity = 74/134 (55.22%), Postives = 93/134 (69.40%), Query Frame = 1
Query: 124 GLLEKKWTSVVRLQRKVMDLEARLEQAQQDLRSGLRPGRDKGGXXXXXXSDRILPRAPAKSVLAGHRSPVTCVALHPLYSIVASSSEDATIKVWDYETGECERTLKGHTNVVQSVTFSPDGQALASCGADTTIK 525
GLLEKKWTSV+RLQ+KVM+LE++L +A+++ G P R K +PR P K LAGHR+PVT V HP++S+ SSSEDATIKVWDYETGE ER LKGHT+ VQ + F G+ L SC AD ++K
Sbjct: 49 GLLEKKWTSVIRLQKKVMELESKLSEAEKEFIEGA-PTRAKRSPTEW------IPRPPEKFCLAGHRAPVTKVIFHPVFSLAVSSSEDATIKVWDYETGEYERALKGHTDAVQDIAFDQSGKLLVSCSADMSVK 175
BLAST of mRNA_M-pyrifera_M_contig13524.5983.1 vs. uniprot
Match: A0A0N5CJK4_THECL (Lissencephaly-1 homolog n=1 Tax=Thelazia callipaeda TaxID=103827 RepID=A0A0N5CJK4_THECL) HSP 1 Score: 144 bits (364), Expect = 2.680e-38 Identity = 84/170 (49.41%), Postives = 112/170 (65.88%), Query Frame = 1
Query: 19 VLEYMRSQGEAFDEAAEAFASATGLEDSSGNEGAKGLLEKKWTSVVRLQRKVMDLEARLEQAQQDLRSGLRPGRDKGGXXXXXXSDRILPRAPAKSVLAGHRSPVTCVALHPLYSIVASSSEDATIKVWDYETGECERTLKGHTNVVQSVTFSPDGQALASCGADTTIKV 528
+ +Y++S G + E+ +AF TGL + + GLLEKKWTSVVRLQ+KVMDLEA+L++A+++ G P R+K +PR P K L GHRSP+T V HP+YSI+ASSSED+TIKVWD+ETG+ ER+LKGHT+ VQ + F SC AD IK+
Sbjct: 17 IADYLQSYG--YSESLDAFRRETGLIQNDDKK-VTGLLEKKWTSVVRLQKKVMDLEAKLQEAEREYIHGA-PTREK------RQPGEWIPRPPEKFSLTGHRSPITRVIFHPVYSIIASSSEDSTIKVWDFETGDFERSLKGHTDAVQDLAFDT-----TSCSADMAIKI 171
BLAST of mRNA_M-pyrifera_M_contig13524.5983.1 vs. uniprot
Match: A0A397CYV0_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397CYV0_9STRA) HSP 1 Score: 141 bits (355), Expect = 5.340e-38 Identity = 82/174 (47.13%), Postives = 113/174 (64.94%), Query Frame = 1
Query: 7 RHVGVLEYMRSQGEAFDEAAEAFASATGLEDSSGNEGAK-GLLEKKWTSVVRLQRKVMDLEARLEQAQQDLR-SGLRPGRDKGGXXXXXXSDRILPRAPAKSVLAGHRSPVTCVALHPLYSIVASSSEDATIKVWDYETGECERTLKGHTNVVQSVTFSPDGQALASCGADTTI 522
RH +LEY+ G F ++A AF GL + ++ K GLLEKKWTSVVRLQRKVM+LE++++Q ++D + G+ RD G + LPRAP K ++GHRSP+TCV HP++S+V +SSEDATIK +G C +TLKGH++ V+ + + DGQ LAS G D I
Sbjct: 11 RHQAILEYLSGLGSTFAQSATAFQQDAGLTMAGESDTTKTGLLEKKWTSVVRLQRKVMELESKIQQLEEDSKLGGVVSRRDVTGIGRDPST--FLPRAPPKYSMSGHRSPITCVVFHPVFSVVVTSSEDATIK-----SGYCTQTLKGHSDWVRDICITDDGQFLASGGNDRAI 177
BLAST of mRNA_M-pyrifera_M_contig13524.5983.1 vs. uniprot
Match: A0A6H5JKZ3_9PHAE (Ge1_WD40 domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKZ3_9PHAE) HSP 1 Score: 141 bits (355), Expect = 6.290e-38 Identity = 69/88 (78.41%), Postives = 78/88 (88.64%), Query Frame = 1
Query: 175 MDLEARLEQAQQDLRSGLRPGRDKGGXXXXXXSDRILPRAPAKSVLAGHRSPVTCVALHPLYSIVASSSEDATIKVWDYETGECERTL 438
M+LEARL+QAQ DL+SG+RPGR+KG SDR+LPRAPAK VL GHR+PVTCVALHPLYS+VASSSEDAT+KVWDYETGECERTL
Sbjct: 1 MELEARLDQAQDDLKSGVRPGREKGAGG----SDRVLPRAPAKGVLTGHRNPVTCVALHPLYSVVASSSEDATVKVWDYETGECERTL 84
BLAST of mRNA_M-pyrifera_M_contig13524.5983.1 vs. uniprot
Match: A0A6A5AET7_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5AET7_9STRA) HSP 1 Score: 140 bits (353), Expect = 3.400e-37 Identity = 77/147 (52.38%), Postives = 102/147 (69.39%), Query Frame = 1
Query: 7 RHVGVLEYMRSQGEAFDEAAEAFASATGLEDSSGNEGAK-GLLEKKWTSVVRLQRKVMDLEARLEQAQQDLR-SGLRPGRDKGGXXXXXXSDRILPRAPAKSVLAGHRSPVTCVALHPLYSIVASSSEDATIKVWDYETGECERTLK 441
RH +LEY+ G F ++A AF GL + ++ K GLLEKKWTSVVRLQRKVM+LE++++Q ++D + G+ RD G + LPRAP K ++GHRSP+TCV HP++S+V +SSEDATIKVWD+ETGE ERTLK
Sbjct: 14 RHQAILEYLSGLGSTFAQSATAFQQDAGLTMAGESDTTKTGLLEKKWTSVVRLQRKVMELESKIQQLEEDSKLGGVVSRRDVTGIGRDPST--FLPRAPPKYSMSGHRSPITCVVFHPVFSVVVTSSEDATIKVWDFETGEFERTLK 158 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig13524.5983.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig13524.5983.1 >prot_M-pyrifera_M_contig13524.5983.1 ID=prot_M-pyrifera_M_contig13524.5983.1|Name=mRNA_M-pyrifera_M_contig13524.5983.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=166bp MRSQGEAFDEAAEAFASATGLEDSSGNEGAKGLLEKKWTSVVRLQRKVMDback to top mRNA from alignment at M-pyrifera_M_contig13524:375..4265+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig13524.5983.1 ID=mRNA_M-pyrifera_M_contig13524.5983.1|Name=mRNA_M-pyrifera_M_contig13524.5983.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=3891bp|location=Sequence derived from alignment at M-pyrifera_M_contig13524:375..4265+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig13524:375..4265+ >mRNA_M-pyrifera_M_contig13524.5983.1 ID=mRNA_M-pyrifera_M_contig13524.5983.1|Name=mRNA_M-pyrifera_M_contig13524.5983.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=996bp|location=Sequence derived from alignment at M-pyrifera_M_contig13524:375..4265+ (Macrocystis pyrifera P11B4 male)back to top |