mRNA_M-pyrifera_M_contig13475.5970.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig13475.5970.1 vs. uniprot
Match: A0A6H5JYU1_9PHAE (2Fe-2S ferredoxin-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JYU1_9PHAE) HSP 1 Score: 151 bits (381), Expect = 1.010e-44 Identity = 75/95 (78.95%), Postives = 80/95 (84.21%), Query Frame = 1
Query: 1 KVNMTFVEDDGTEVQVEAELGATLLEVAHDNDVELEGEAPSINHPVRRYRVRACGGDLACSTCHVILPKEYYDKLDEKEEEEDDMLDLAWGLTDT 285
KVNMTF+EDDGTE++VEAELGATLLEVAH+NDVELEG ACGGDLACSTCHV+LPKEYYDKLDEKEEEEDDMLDLAWGLTDT
Sbjct: 70 KVNMTFLEDDGTEIKVEAELGATLLEVAHENDVELEG---------------ACGGDLACSTCHVVLPKEYYDKLDEKEEEEDDMLDLAWGLTDT 149
BLAST of mRNA_M-pyrifera_M_contig13475.5970.1 vs. uniprot
Match: A0A835YS64_9STRA (2Fe-2S ferredoxin-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YS64_9STRA) HSP 1 Score: 117 bits (294), Expect = 2.750e-32 Identity = 59/94 (62.77%), Postives = 69/94 (73.40%), Query Frame = 1
Query: 4 VNMTFVEDDGTEVQVEAELGATLLEVAHDNDVELEGEAPSINHPVRRYRVRACGGDLACSTCHVILPKEYYDKLDEKEEEEDDMLDLAWGLTDT 285
VN+TFVE DG +V V+A LG +LLEVAH+NDVELEG ACGGDLACSTCH++ PK+ YD L K+EEE+DMLDLAWGLTDT
Sbjct: 5 VNVTFVEADGRKVSVKAPLGKSLLEVAHENDVELEG---------------ACGGDLACSTCHLVFPKDVYDTLPPKQEEEEDMLDLAWGLTDT 83
BLAST of mRNA_M-pyrifera_M_contig13475.5970.1 vs. uniprot
Match: A0A024GFP2_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GFP2_9STRA) HSP 1 Score: 105 bits (262), Expect = 7.880e-27 Identity = 52/103 (50.49%), Postives = 70/103 (67.96%), Query Frame = 1
Query: 1 KVNMTFVEDDGTEVQVEAELGATLLEVAHDNDVELEGEAPSINHPVRRYRVR--------ACGGDLACSTCHVILPKEYYDKLDEKEEEEDDMLDLAWGLTDT 285
KV+ F++++G + A +G TLL+VAHDND+ELEG + S+ ++ + ACGG+LACSTCH+I KE YD L E EEE+DMLDLAWGLT+T
Sbjct: 63 KVSFCFIDNEGQRNCISAAIGETLLDVAHDNDIELEGSSSSLTIFLKFFNPDSSSPFLKGACGGELACSTCHLIFEKEVYDALPEVSEEEEDMLDLAWGLTET 165
BLAST of mRNA_M-pyrifera_M_contig13475.5970.1 vs. uniprot
Match: A0A2D4BR67_PYTIN (2Fe-2S ferredoxin, putative n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BR67_PYTIN) HSP 1 Score: 105 bits (261), Expect = 1.210e-26 Identity = 52/95 (54.74%), Postives = 65/95 (68.42%), Query Frame = 1
Query: 1 KVNMTFVEDDGTEVQVEAELGATLLEVAHDNDVELEGEAPSINHPVRRYRVRACGGDLACSTCHVILPKEYYDKLDEKEEEEDDMLDLAWGLTDT 285
KV+ TF++ DG QV A G TLL+VAH+ND+ELEG ACGG+LACSTCH++ K+ +D+L E EEE+DMLDLAWGLTDT
Sbjct: 61 KVSFTFIDGDGNASQVIANAGQTLLDVAHENDIELEG---------------ACGGELACSTCHLVFEKDVFDQLPEITEEEEDMLDLAWGLTDT 140
BLAST of mRNA_M-pyrifera_M_contig13475.5970.1 vs. uniprot
Match: A0A5D6XTI2_9STRA (2Fe-2S ferredoxin-type domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XTI2_9STRA) HSP 1 Score: 104 bits (260), Expect = 1.270e-26 Identity = 54/94 (57.45%), Postives = 64/94 (68.09%), Query Frame = 1
Query: 4 VNMTFVEDDGTEVQVEAELGATLLEVAHDNDVELEGEAPSINHPVRRYRVRACGGDLACSTCHVILPKEYYDKLDEKEEEEDDMLDLAWGLTDT 285
V+ TF++ DG V V AE G TLL+VA +NDVELEG ACGG+LACSTCH++ KE +DKL E EEE+DMLDLAWGLTDT
Sbjct: 51 VSFTFIDADGGSVAVTAEPGKTLLDVAQENDVELEG---------------ACGGELACSTCHLVFEKELFDKLPEISEEEEDMLDLAWGLTDT 129
BLAST of mRNA_M-pyrifera_M_contig13475.5970.1 vs. uniprot
Match: K3W9Y4_GLOUD (2Fe-2S ferredoxin-type domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3W9Y4_GLOUD) HSP 1 Score: 103 bits (257), Expect = 3.340e-26 Identity = 51/95 (53.68%), Postives = 64/95 (67.37%), Query Frame = 1
Query: 1 KVNMTFVEDDGTEVQVEAELGATLLEVAHDNDVELEGEAPSINHPVRRYRVRACGGDLACSTCHVILPKEYYDKLDEKEEEEDDMLDLAWGLTDT 285
KV TF++ +G V A LG +LL+VAH+ND+ELEG ACGG+LACSTCH++ KE ++KL E EEE+DMLDLAWGLTDT
Sbjct: 47 KVTFTFIDAEGESTTVAATLGQSLLDVAHENDIELEG---------------ACGGELACSTCHLVFEKELFEKLPEISEEEEDMLDLAWGLTDT 126
BLAST of mRNA_M-pyrifera_M_contig13475.5970.1 vs. uniprot
Match: A0A6A3MC83_9STRA (2Fe-2S ferredoxin-type domain-containing protein n=5 Tax=Phytophthora TaxID=4783 RepID=A0A6A3MC83_9STRA) HSP 1 Score: 102 bits (253), Expect = 1.210e-25 Identity = 52/95 (54.74%), Postives = 63/95 (66.32%), Query Frame = 1
Query: 1 KVNMTFVEDDGTEVQVEAELGATLLEVAHDNDVELEGEAPSINHPVRRYRVRACGGDLACSTCHVILPKEYYDKLDEKEEEEDDMLDLAWGLTDT 285
+V TFV+ +G +V AE G TLL+VAH+NDVELEG ACGG+LACSTCH++ K +D L E EEE+DMLDLAWGLTDT
Sbjct: 43 QVTFTFVDGEGESTRVAAEEGQTLLDVAHENDVELEG---------------ACGGELACSTCHLVFEKRIFDGLPEISEEEEDMLDLAWGLTDT 122
BLAST of mRNA_M-pyrifera_M_contig13475.5970.1 vs. uniprot
Match: A0A8K1CBJ2_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CBJ2_PYTOL) HSP 1 Score: 102 bits (253), Expect = 1.350e-25 Identity = 52/95 (54.74%), Postives = 63/95 (66.32%), Query Frame = 1
Query: 1 KVNMTFVEDDGTEVQVEAELGATLLEVAHDNDVELEGEAPSINHPVRRYRVRACGGDLACSTCHVILPKEYYDKLDEKEEEEDDMLDLAWGLTDT 285
KV TF++ +G +V AE G TL +VAHDND+ELE ACGG+LACSTCH+I +E +DKL E EEE+DMLDLAWGLTDT
Sbjct: 47 KVTFTFIDGEGVPTEVTAEEGQTLNDVAHDNDIELEC---------------ACGGELACSTCHLIFEQEVFDKLPEISEEEEDMLDLAWGLTDT 126
BLAST of mRNA_M-pyrifera_M_contig13475.5970.1 vs. uniprot
Match: A0A2P4XWM3_9STRA (2Fe-2S ferredoxin n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XWM3_9STRA) HSP 1 Score: 101 bits (251), Expect = 2.120e-25 Identity = 51/95 (53.68%), Postives = 63/95 (66.32%), Query Frame = 1
Query: 1 KVNMTFVEDDGTEVQVEAELGATLLEVAHDNDVELEGEAPSINHPVRRYRVRACGGDLACSTCHVILPKEYYDKLDEKEEEEDDMLDLAWGLTDT 285
+V TFV+ +G V+AE G +LL+VAH+NDVELEG ACGG+LACSTCH++ K +D L E EEE+DMLDLAWGLTDT
Sbjct: 38 QVTFTFVDGEGERTTVKAEEGQSLLDVAHENDVELEG---------------ACGGELACSTCHLVFEKRIFDNLPEISEEEEDMLDLAWGLTDT 117
BLAST of mRNA_M-pyrifera_M_contig13475.5970.1 vs. uniprot
Match: L8GR90_ACACA (Adrenodoxinlike ferredoxin 2 n=2 Tax=Acanthamoeba castellanii TaxID=5755 RepID=L8GR90_ACACA) HSP 1 Score: 101 bits (252), Expect = 2.420e-25 Identity = 51/94 (54.26%), Postives = 66/94 (70.21%), Query Frame = 1
Query: 4 VNMTFVEDDGTEVQVEAELGATLLEVAHDNDVELEGEAPSINHPVRRYRVRACGGDLACSTCHVILPKEYYDKLDEKEEEEDDMLDLAWGLTDT 285
V++TF++ DGTE+ +EA +G ++LE+AHDN ++LEG AC LACSTCHVIL KEYYDKL EEE+DMLDLA+GLT+T
Sbjct: 56 VHVTFIDKDGTEIPLEAPVGKSVLELAHDNKIDLEG---------------ACEASLACSTCHVILDKEYYDKLPAPVEEEEDMLDLAFGLTET 134 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig13475.5970.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig13475.5970.1 >prot_M-pyrifera_M_contig13475.5970.1 ID=prot_M-pyrifera_M_contig13475.5970.1|Name=mRNA_M-pyrifera_M_contig13475.5970.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=93bp MTFVEDDGTEVQVEAELGATLLEVAHDNDVELEGEAPSINHPVRRYRVRAback to top mRNA from alignment at M-pyrifera_M_contig13475:7131..8196- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig13475.5970.1 ID=mRNA_M-pyrifera_M_contig13475.5970.1|Name=mRNA_M-pyrifera_M_contig13475.5970.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=1066bp|location=Sequence derived from alignment at M-pyrifera_M_contig13475:7131..8196- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig13475:7131..8196- >mRNA_M-pyrifera_M_contig13475.5970.1 ID=mRNA_M-pyrifera_M_contig13475.5970.1|Name=mRNA_M-pyrifera_M_contig13475.5970.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=558bp|location=Sequence derived from alignment at M-pyrifera_M_contig13475:7131..8196- (Macrocystis pyrifera P11B4 male)back to top |