mRNA_M-pyrifera_M_contig13449.5963.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig13449.5963.1 vs. uniprot
Match: D8LLV5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLV5_ECTSI) HSP 1 Score: 421 bits (1081), Expect = 2.190e-131 Identity = 251/401 (62.59%), Postives = 282/401 (70.32%), Query Frame = 1
Query: 1 GRLSTLVRGVGDPMVAVFCHSFITAAGASIATIATDAAPTEESSHAVRSLQDYLFSLQEVRQGKLRGYLRANSLGVPDYLHLHTPAVDWLLGIVGPGASRGVFTSILTHYRNHCGNLEMLRLILRHFGPKHYAPFALEMALLIKQSDGVSSHCSAAEVMGLLGRNL--AGGVQPAGEDAVPLLNEAWQEIAPAPLEIYVEGASAWLGVLLHNPAYGPDEVAILVEDVACRVEAASPFELSRVQSRLAGGVVGALTRAGDVAALEAGGGHVVKA--ALDKNIRAQACLDLLAAHLRALPIAHEHQQRAPTRSMRNFLPXXXXXXXXXXRGQRAXXXXGTPGVPRGERVGGGPRGXXXXXXXXXXXXXXXXXXELELARTLVGVAKLLHDSLDALSAGERQRQ 1191
GRLSTLVRGVG PMVAV+C F+ AAGA +A ES+HAV SLQDYLFSLQEV+QGKL G+LRAN G+ +YLHLH PA+DWLLG+VGPGA RGVFTSIL HYRNHCG LE+LRLIL HF P+HYAPFALEMALLIKQ + + C+ EVMGLLG L AG P+G +AVPLLNEAWQEIAPAPL++YVEGA+AWLGVLL +PAYGPDEVAIL+EDVACR+E AS EL+ VQ RLA GV GAL A D +AL A G HVVK LDK+ RAQACLDLLAA LR+LP + P + P XXXXX X PG ER G R XXX E+ELAR LVGVAKLLHDS D LS+GERQRQ
Sbjct: 565 GRLSTLVRGVGSPMVAVYCRCFVAAAGAEVAP--------RESAHAVASLQDYLFSLQEVQQGKLEGHLRANQFGLSEYLHLHAPAIDWLLGVVGPGAPRGVFTSILAHYRNHCGILEVLRLILNHFSPEHYAPFALEMALLIKQGQELPTRCTVPEVMGLLGLKLSSAGSAHPSGPEAVPLLNEAWQEIAPAPLQVYVEGAAAWLGVLLQSPAYGPDEVAILMEDVACRMEDASTSELASVQGRLADGVAGALACAKDPSALRAAGVHVVKVLGVLDKSRRAQACLDLLAALLRSLP-----RHTPPPTGRVSARPATTPQXXXXXXXXXXXPESSAPG----EREDG--RSKSGXXXGEEKKKGAAIKGEVELARALVGVAKLLHDSFDLLSSGERQRQ 946
BLAST of mRNA_M-pyrifera_M_contig13449.5963.1 vs. uniprot
Match: A0A6H5JSK9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSK9_9PHAE) HSP 1 Score: 381 bits (979), Expect = 5.390e-118 Identity = 256/498 (51.41%), Postives = 286/498 (57.43%), Query Frame = 1
Query: 1 GRLSTLVRGVGDPMVAVFCHSFITAAGASIATIATDAAPTEESSHAVRSLQDYLFSLQEVRQGKLRGYLRANSLGVPDYLHLHTPAVDWLLGIVGPGASRGVFTSILTHYRNHCGNLEMLRLILRHFGPKHYAPFALEMALLIKQSDGVSSHCSAAEVMGLLGRNL--AGGVQPAGEDAVPLLNEAWQEIAPAPLEIYVEGASAWLGVLLHNPAYGPDEVAILVEDVACRVEAASPFELSRVQSRLAGGVVGALTRAGDVAALEAGGGHVVK-------------------------------------------------------------------------------------------AALDKNIRAQACLDLLAAHLRALPI--------AHEHQQRAPTRSMRNFLPXXXXXXXXXXRGQRAXXXXGTPGVPRGERVGGGPRGXXXXXXXXXXXXXXXXXXELELARTLVGVAKLLHDSLDALSAGERQRQ 1191
GRLSTLVRGVG+PMVAV+C F+ AAGA++A ES+HAV SLQDYLFSLQEV+QGKL GYLRAN G+ +YLHLH PA+DWLLG+VGPGA RGVFTSIL +YRNHCG LE+LRLIL HF P+HYAPFALEMALLIKQ +S+ C+ EVMGLLG L AG P+G +AVPLLNEAWQEIAPAPLE+YVEGA+AWLGVLL +PAYGPDEVAIL+EDVACR+E AS EL+ VQ RLA GVV AL A D +AL A GGHVVK A LDK+ RAQACLDLLAA LRALP P XXXXXXXXXX XXXX E+ G G E+ELAR LV VAKLLHDS D LS+GERQRQ
Sbjct: 164 GRLSTLVRGVGNPMVAVYCRCFVAAAGAAVAP--------RESAHAVASLQDYLFSLQEVQQGKLEGYLRANQFGLSEYLHLHAPAIDWLLGVVGPGAPRGVFTSILANYRNHCGILEVLRLILNHFSPEHYAPFALEMALLIKQGQELSTRCTVPEVMGLLGLKLSGAGSAHPSGPEAVPLLNEAWQEIAPAPLEVYVEGAAAWLGVLLQSPAYGPDEVAILMEDVACRMEDASASELASVQGRLADGVVSALACAKDPSALRAAGGHVVKEGLEVYGMLKEGIGFKDYLHGPMDAGTKLKVKFRTGDIGLRERRRRHRTVDEEDDEFKCDCGFECEDRVHVVAECPLYQKEREVGQRDSVLAVLDKSRRAQACLDLLAAFLRALPRHTPPPTGRVSARSATTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEQKGATVNG------------------EVELARALVRVAKLLHDSFDLLSSGERQRQ 635
BLAST of mRNA_M-pyrifera_M_contig13449.5963.1 vs. uniprot
Match: A0A7S1UKF3_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UKF3_9STRA) HSP 1 Score: 133 bits (335), Expect = 2.900e-30 Identity = 87/239 (36.40%), Postives = 133/239 (55.65%), Query Frame = 1
Query: 1 GRLSTLVRGVGDPMVAVFCHSFITAAGASIATIATDAAPTEESSHAVRSLQDYLFSLQE-VRQGKLRGYLRA-NSLGVPDYLHLHTPAVDWLLGIVGPGASRGVFTSILTHYRNHCGNLEMLRLILRHFGPKHYAPFALEMALLIKQSDGVSSHCSAAEVMGLLGRNLAGGVQPAGEDAVPLLNEAWQEIAPAP-LEIYVEGASAWLGVLLHNPAYGPDEVAILVEDVACRVEAASPFE 708
GRL++++RGVGDP++A + ++T IA + AP + +A R+L DY+F+ R G LR L+ ++ + YLHLH PAV+WL VG GA + ++L HYR C N +L+ IL F YA A + +LIK++ S ++M +LGR LA P E + +LNE W+ ++ YVE ASAWL VL+ + Y EV +L++D+A +E A+ +
Sbjct: 225 GRLASIIRGVGDPLIAAYARCYLT-------RIAGEVAP-QVRDYAQRALFDYMFAFDSFTRYGGLRRTLKEYGAMDLKAYLHLHAPAVEWLCDCVGAGADQATLAAVLQHYRQRCSNATVLKHILYAFDSALYAGKAGAVVILIKEA--TEGSVSQVQLMTVLGRRLAE-TPPPPEQRLQVLNEVWRVVSACDDFAQYVEAASAWLEVLVRH--YSEREVLVLLKDLARHLEDAADVD 450
BLAST of mRNA_M-pyrifera_M_contig13449.5963.1 vs. uniprot
Match: F0Y850_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y850_AURAN) HSP 1 Score: 118 bits (295), Expect = 4.000e-25 Identity = 82/234 (35.04%), Postives = 120/234 (51.28%), Query Frame = 1
Query: 1 GRLSTLVRGVGDPMVAVFCHSFITAAGASIATIATDAAPTEESSHAVRSLQDYLFSLQEVRQGKLRGYLRANSLGVPDYLHLHTPAVDWLLGIVGPGASRGVFTSILTHYRNHCGNLEMLRLILRHFGPKHYAPFALEMALLIKQSDGVSSHCSAAEVMGLLGRNLAGGVQPAGEDAVPLLNEAWQEIAPAPLEI--YVEGASAWLGVLLHNPAYGPDEVAILVEDVACRVEAA 696
GRL ++ RGVGDP+V V+ ++ GA +A +AV L DYLF +EVR+ L A L Y+ L PAV+W+L +G GAS F +++ HYR++C + +L I+ F A L + L KQ++ S + ++G LGR A P + +LNE W+ +A E+ YV A+AWL LL + YG EV +L+ DV V+AA
Sbjct: 165 GRLGSIARGVGDPLVGVYARCYLAKVGADVAPACKP--------YAVTMLHDYLFCFKEVRREPFASRLAALGLSDGQYIRLGEPAVEWVLRCIGRGASYEHFETVVAHYRDYCNDATVLAHIVDAFDAASVAKHPLGVVGLAKQAE--PSRVTTVALLGRLGRRFAE-CPPPPHQRLAVLNEVWK-VATRCTELGDYVACATAWLDCLLKH--YGDREVKVLLGDVIDHVDAA 384
BLAST of mRNA_M-pyrifera_M_contig13449.5963.1 vs. uniprot
Match: A0A8K1CUG7_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CUG7_PYTOL) HSP 1 Score: 115 bits (287), Expect = 5.490e-24 Identity = 77/253 (30.43%), Postives = 136/253 (53.75%), Query Frame = 1
Query: 4 RLSTLVRGVGDPMVAVFCHSFITAAGASIATIATDAAPTEESSHAVRSLQDYLFSLQEVRQGKLRGYLRANSLGVPDYLHLHTPAVDWLLGIVGPGASRGVFTSILTHYRNHCGNLEMLRLILRHFGPKHYAPFALEMALLIK-QSDGVSSHCSAAEVMGLL---GRNLAGGVQPAGEDAVPLLNEAWQEI-APAPLEIYVEGASAWLGVLLHNPAYGPDEVAILVEDVACRVEAASPFELSRVQSRLAGGVV 747
RL+++++GVG+PMVA++ ++ A +T+ E + + SL DY F+ Q+ + KL YL + L YL LH+PA++WL+ ++ VF ++L+HYR N +L+ + FGP++YA + M L++ S S C ++ + R +AGG + E+ + LNEAW I + +E Y+E A+A++ +++ + Y E IL++DV + +A P EL+ L G ++
Sbjct: 406 RLASMIKGVGEPMVALYTRLYL-------ALASTELVNPGEKAAVLTSLYDYFFAFQQYQLNKLDQYLTSQQLTHEAYLALHSPAIEWLMKCAAHSSTEIVFEALLSHYREFSDNSMVLKHLCESFGPEYYALNPIPMLQLMRLASPSQYSKCHLYSILAIQLSSARAIAGGSK---EEKLQFLNEAWASITSQEKIEQYMECAAAYMKLIVAH--YTHREAMILLKDVVRHLNSAIPDELTAKVYNLLGALI 646
BLAST of mRNA_M-pyrifera_M_contig13449.5963.1 vs. uniprot
Match: K3WSD6_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WSD6_GLOUD) HSP 1 Score: 110 bits (276), Expect = 1.370e-22 Identity = 75/251 (29.88%), Postives = 130/251 (51.79%), Query Frame = 1
Query: 4 RLSTLVRGVGDPMVAVFCHSFITAAGASIATIATDAAPTEESSHAVRSLQDYLFSLQEVRQGKLRGYLRANSLGVPDYLHLHTPAVDWLLGIVGPGASRGVFTSILTHYRNHCGNLEMLRLILRHFGPKHYAPFALEMALLIKQSDGVSSHCSAAEVMGLLGRNLAGG--VQPAGEDAVPLLNEAWQEI-APAPLEIYVEGASAWLGVLLHNPAYGPDEVAILVEDVACRVEAASPFELSRVQSRLAGGVV 747
RLS +++GVG+PMVA++ ++ +G+ + P + + + SL DY FS + + KL +L N++ +YL LH+PAV+WL+ VF +IL HYR + N +L+ I FG + YA L M L++ S S + + LL L+ + + E + LN+AW I + + Y+E A+A++ +++ + + E IL++DV + AA+P EL+ L G ++
Sbjct: 345 RLSNMIKGVGEPMVALYTRVYLALSGSELL-------PPSDKTAVLSSLFDYFFSYNQFQATKLEKWLETNNMTQEEYLGLHSPAVEWLMKCAASDCHHEVFDTILAHYREYSDNSMVLKHICEAFGAQFYASRPLVMLHLMRLS--TPSQYTKCHLYSLLALQLSASPTLTTSKEGKLQFLNDAWTSITSQEDIAQYMECAAAYMKLIVAH--FSHREALILLKDVVRHLNAATPDELTPKVYNLMGALI 584
BLAST of mRNA_M-pyrifera_M_contig13449.5963.1 vs. uniprot
Match: A0A6A3Y5Q6_9STRA (Uncharacterized protein n=6 Tax=Phytophthora TaxID=4783 RepID=A0A6A3Y5Q6_9STRA) HSP 1 Score: 107 bits (267), Expect = 2.060e-21 Identity = 70/250 (28.00%), Postives = 132/250 (52.80%), Query Frame = 1
Query: 4 RLSTLVRGVGDPMVAVFCHSFITAAGASIATIATDAAPTEESSHAVRSLQDYLFSLQEVRQGKLRGYLRANSLGVPDYLHLHTPAVDWLLGIVGPGASRGVFTSILTHYRNHCGNLEMLRLILRHFGPKHYAPFALEMALLIK-QSDGVSSHCSAAEVMGLLGRNLAGGVQPAGEDAVPLLNEAWQEIAPAP-LEIYVEGASAWLGVLLHNPAYGPDEVAILVEDVACRVEAASPFELSRVQSRLAGGVV 747
RLS +++GVG+PMVA++ ++ A + + + P+E++ SL DY ++ R+ KL +L + + +YL LH+PAV+WL+ PGA++ F ++L HY+ + + +L+ + FG K YA EM LI+ S + S C ++ + N+ + + LN++W I + Y+E A+A++ +++ + + E IL++DV + +A+P EL+ L G ++
Sbjct: 373 RLSNMLKGVGEPMVALYARLYLALASSELLGTTS---PSEQAIVVSSSLFDYFYAFNWFRRNKLEHWLLTHKMEHDEYLALHSPAVEWLVKCAAPGATQDSFDTLLAHYQEYSDSSMVLKHLCECFGAKFYASTPTEMLELIRVSSPSLVSKCHLYSLVAVQLSNVPVIAENEPGGKLQFLNDSWSSITSQENITQYMECAAAYMKLIVVH--FSHREALILLKDVVRHLNSATPEELTAKTYNLLGALI 617
BLAST of mRNA_M-pyrifera_M_contig13449.5963.1 vs. uniprot
Match: D0NQN4_PHYIT (Uncharacterized protein n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0NQN4_PHYIT) HSP 1 Score: 105 bits (261), Expect = 1.170e-20 Identity = 73/257 (28.40%), Postives = 131/257 (50.97%), Query Frame = 1
Query: 4 RLSTLVRGVGDPMVAVFCHSFITAAGASIATIATDAAPTEESSHAVRSLQDYLFSLQEVRQGKLRGYLRANSLGVPDYLHLHTPAVDWLLGIVGPGASRGVFTSILTHYRNHCGNLEMLRLILRHFGPKHYAPFALEMALLIKQ-SDGVSSHCSAAEVMGL-------LGRNLAGGVQPAGEDAVPLLNEAWQEI-APAPLEIYVEGASAWLGVLLHNPAYGPDEVAILVEDVACRVEAASPFELSRVQSRLAGGVV 747
RLS +++GVG+PMVA++ ++ + + + P E++ SL DY ++ RQ KL +L + + +YL LH+PAV+WL+ PGAS+ F ++L HY+ + + +L+ + FG Y EM LI+ S + S C ++ + + N AGG + LN++W I + + Y+E A+A++ +++ + + E IL++DV + AA+P EL+ L G ++
Sbjct: 318 RLSNMIKGVGEPMVALYARLYLALTSSELLGTTS---PAEQTIVVNSSLFDYFYAFNWFRQKKLEHWLLTHKMEYDEYLALHSPAVEWLVKCAAPGASQDSFDTLLAHYQEYSYSSMVLKHLCECFGATFYVSTPSEMLELIRTASPSLISQCHLYSLVAVQLSSVPAIAENEAGG-------KLQFLNDSWSAITSQEDITQYMECAAAYMKLIVAH--FSHREALILLKDVVRHLNAATPEELTAKTYNLLGALI 562
BLAST of mRNA_M-pyrifera_M_contig13449.5963.1 vs. uniprot
Match: H3GGU9_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GGU9_PHYRM) HSP 1 Score: 103 bits (257), Expect = 3.930e-20 Identity = 72/256 (28.12%), Postives = 134/256 (52.34%), Query Frame = 1
Query: 4 RLSTLVRGVGDPMVAVFCHSFITAAGASIATIATDAAPTEESSHAVRSLQDYLFSLQEVRQGKLRGYLRANSLGVPDYLHLHTPAVDWLLGIVGPGASRGVFTSILTHYRNHCGNLEMLRLILRHFGPKHYAPFALEMALLIKQ-SDGVSSHCSAAEVMGLLGRNLAGGVQPAGEDAVPLLNEAWQEI-APAPLEIYVEGASAWLGVLLHN------PAYGPDEVAILVEDVACRVEAASPFELSRVQSRLAGGVV 747
RLS +++GVG+PMVA++ ++ A S + T + P E++ SL DY ++ R+ KL +L +++ +YL LH+PAV+WL+ PGA++ F +++ HY+ + + +L+ + FG + YA EM LI+ S + S C ++ + ++ + + LN++W I + + Y+E A+A+L +++ + A E IL++DV + AA+P EL+ L G ++
Sbjct: 378 RLSNMIKGVGEPMVALYARLYL--ALTSSEPLGTSS-PAEQTLVVSSSLFDYFYAFNWFRRNKLEHWLLTHNMEYGEYLALHSPAVEWLVKCAAPGATQDTFDALVVHYQEYSDSSMVLKHLCECFGARFYASTPTEMLELIRTASPSLVSKCHLYSLVAVQLSSVPAMAENEPGGKLQFLNDSWSSITSQEDITQYMECAAAYLKLIVAHFSVRNVLAMKHREALILLKDVVRHLNAATPEELTAKTYNLLGALI 630
BLAST of mRNA_M-pyrifera_M_contig13449.5963.1 vs. uniprot
Match: A0A2G8JZF1_STIJA (Putative UPF0505 protein C16orf62 n=1 Tax=Stichopus japonicus TaxID=307972 RepID=A0A2G8JZF1_STIJA) HSP 1 Score: 98.2 bits (243), Expect = 1.800e-18 Identity = 67/239 (28.03%), Postives = 117/239 (48.95%), Query Frame = 1
Query: 4 RLSTLVRGVGDPMVAVFCHSFITAAGASIATIATDAAPTEESSHAVRSLQDYLFSLQEVRQGKLRGYLRANSLGVPDYLHLHTPAVDWLLGIVGPGASRGVFTSILTHYRNHCGNLEMLRLILRHFGPKHYAPFALEMALLIKQSD--GVSSHCSAAEVMGLLGRNLAGGVQPAGEDAVPLLNEAWQEIAP--APLEIYVEGASAWLGVLLHNPAYGPDEVAILVEDVACRVEAASPFE 708
RL+T +RG+GDP+VA++ ++++ G ++A + SH + +L D++ S ++ ++ L L +P YLHL++PA+DWLL + A+ T IL + HC N +L I+ F P+ + A+E LI++ + G H + LG NL PA + +LNE W+ + P+E Y+ A W+ + + EV ++ D+ + FE
Sbjct: 331 RLTTQIRGIGDPLVAIYGRAYLSRVGMAVAP--------QVKSHHINNLYDFINSFSQLDSDTVQNVLAMQRLDMPSYLHLYSPALDWLLQCIAFKAAENTLTEILGKCKKHCNNALLLNSIMSAFKPEFISRRAIEFLELIRECEEAGFPKH----NLYKSLGTNLMLAA-PAEQHRRGILNEVWKAVMKFQTPME-YITCAEVWVEFPCKH--FSKKEVNTILNDIIKHMTPDRAFE 553 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig13449.5963.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig13449.5963.1 >prot_M-pyrifera_M_contig13449.5963.1 ID=prot_M-pyrifera_M_contig13449.5963.1|Name=mRNA_M-pyrifera_M_contig13449.5963.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=397bp GRLSTLVRGVGDPMVAVFCHSFITAAGASIATIATDAAPTEESSHAVRSLback to top mRNA from alignment at M-pyrifera_M_contig13449:934..8801+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig13449.5963.1 ID=mRNA_M-pyrifera_M_contig13449.5963.1|Name=mRNA_M-pyrifera_M_contig13449.5963.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=7868bp|location=Sequence derived from alignment at M-pyrifera_M_contig13449:934..8801+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig13449:934..8801+ >mRNA_M-pyrifera_M_contig13449.5963.1 ID=mRNA_M-pyrifera_M_contig13449.5963.1|Name=mRNA_M-pyrifera_M_contig13449.5963.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=2382bp|location=Sequence derived from alignment at M-pyrifera_M_contig13449:934..8801+ (Macrocystis pyrifera P11B4 male)back to top |