mRNA_M-pyrifera_M_contig13348.5927.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig13348.5927.1
Unique NamemRNA_M-pyrifera_M_contig13348.5927.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
[Close]
BLAST of mRNA_M-pyrifera_M_contig13348.5927.1 vs. uniprot
Match: D7FMC2_ECTSI (Solanesyl diphosphate synthase-like protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FMC2_ECTSI)

HSP 1 Score: 499 bits (1284), Expect = 1.740e-174
Identity = 258/274 (94.16%), Postives = 264/274 (96.35%), Query Frame = 1 
Query:    1 PEDVDPFKLANKDLSPFTDTIKELVESEHPVLSMAAKHFFEKRHGKRFRPTIVALMALATCDKTMEDHRVSLEYTRQGQLGQITEMIHVASLIHDDVLDEAEVRRGGMAVHKLYSNKVAVLAGDYLLARASVLLARLNDVQVVEIMATALDSLVQGEIMQLKMDPEKMLDISQYLKKSYYKTASLITNACKSCALLGGHEFGSDVATAAEEYGYHMGLAFQIVDDILDIVGAADVLGKPAMADMSLGLATAPILYAAEGTPEIKKIIKRRFKKD 822
            P DVDPFKLA+KDLSPFTDTIKELVESEHPVLSMAAKHFFEKRHGKRFRPTIVALMALATCDK ME HR S EYTRQGQLGQITEMIHVASLIHDDVLDEAEVRRGGMAVHKLYSNKVAVLAGDYLLARASVLLARL DVQVVEIMATALDSLVQGEIMQLKMDPEK+LDIS YL+KSYYKTASLITNACKSCA+LGGHEF SDVATAAEEYGYHMGLAFQIVDDILDIVGAADVLGKPAMADMSLGLATAPILYAAE  PEIKKI+KRRFKK+
Sbjct:  148 PYDVDPFKLASKDLSPFTDTIKELVESEHPVLSMAAKHFFEKRHGKRFRPTIVALMALATCDKPMEAHRESEEYTRQGQLGQITEMIHVASLIHDDVLDEAEVRRGGMAVHKLYSNKVAVLAGDYLLARASVLLARLGDVQVVEIMATALDSLVQGEIMQLKMDPEKLLDISLYLRKSYYKTASLITNACKSCAILGGHEFDSDVATAAEEYGYHMGLAFQIVDDILDIVGAADVLGKPAMADMSLGLATAPILYAAENAPEIKKIVKRRFKKE 421
[Close]
BLAST of mRNA_M-pyrifera_M_contig13348.5927.1 vs. uniprot
Match: A0A835YRD5_9STRA (Isoprenoid synthase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRD5_9STRA)

HSP 1 Score: 413 bits (1062), Expect = 2.750e-141
Identity = 210/269 (78.07%), Postives = 238/269 (88.48%), Query Frame = 1 
Query:   10 VDPFKLANKDLSPFTDTIKELVESEHPVLSMAAKHFFEKRHGKRFRPTIVALMALATCDKTMEDHRVSLEYTRQGQLGQITEMIHVASLIHDDVLDEAEVRRGGMAVHKLYSNKVAVLAGDYLLARASVLLARLNDVQVVEIMATALDSLVQGEIMQLKMDPEKMLDISQYLKKSYYKTASLITNACKSCALLGGHEFGSDVATAAEEYGYHMGLAFQIVDDILDIVGAADVLGKPAMADMSLGLATAPILYAAEGTPEIKKIIKRRFK 816
            +D F++  +DL+PFTD+IKELV+++HPVLSMAAKHFFE+RHGKRFRPTIV LM+ A  ++  E  R S +Y RQGQLG ITEMIHVASLIHDDVLDEAE RRGG+AVHKLYSNKVAVLAGDYLLARASVLLARLN+VQVVEIMATALDSLVQGEIMQL+  PE +LD+S YLKKSYYKTASLI +ACKS ALLGGH+F SD+A AAEEYGYHMGLAFQIVDDILD+   A+VLGKPAMADMSLGLATAP+LYAAE   E++ +IKRRFK
Sbjct:  116 IDAFEMVKEDLAPFTDSIKELVDTQHPVLSMAAKHFFERRHGKRFRPTIVCLMSRAVSEQPYETLRTSQQYKRQGQLGTITEMIHVASLIHDDVLDEAETRRGGLAVHKLYSNKVAVLAGDYLLARASVLLARLNNVQVVEIMATALDSLVQGEIMQLQSAPEDLLDMSHYLKKSYYKTASLICSACKSAALLGGHDFDSDLAVAAEEYGYHMGLAFQIVDDILDVTAGAEVLGKPAMADMSLGLATAPLLYAAEEVKELRPLIKRRFK 384
[Close]
BLAST of mRNA_M-pyrifera_M_contig13348.5927.1 vs. uniprot
Match: A0A835Z077_9STRA (Isoprenoid synthase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z077_9STRA)

HSP 1 Score: 404 bits (1038), Expect = 1.090e-137
Identity = 205/269 (76.21%), Postives = 236/269 (87.73%), Query Frame = 1 
Query:   10 VDPFKLANKDLSPFTDTIKELVESEHPVLSMAAKHFFEKRHGKRFRPTIVALMALATCDKTMEDHRVSLEYTRQGQLGQITEMIHVASLIHDDVLDEAEVRRGGMAVHKLYSNKVAVLAGDYLLARASVLLARLNDVQVVEIMATALDSLVQGEIMQLKMDPEKMLDISQYLKKSYYKTASLITNACKSCALLGGHEFGSDVATAAEEYGYHMGLAFQIVDDILDIVGAADVLGKPAMADMSLGLATAPILYAAEGTPEIKKIIKRRFK 816
            VD F +  +DL+PFT++I+ELV+++HPVLSMAAKHFFE+RHGKRFRPTIV +M+ A  +   E  + SL+Y RQG+LG ITEMIHVASLIHDDVLDEAE RRGG+AVHKLYSNKVAVLAGDYLLARASVLLARLN+V+VVEIMATALDSLVQGEIMQL+  PE +LD++ YLKKSYYKTASLI +ACKS ALL GH+FGS  A AAEEYGYHMGLAFQI+DDILD+  AADVLGKPAMADMSLGLATAP+LYAAE  P ++ +IKRRFK
Sbjct:  113 VDAFDMVKEDLTPFTESIRELVDTQHPVLSMAAKHFFERRHGKRFRPTIVCMMSRAVSEVPYEVLKNSLQYKRQGELGTITEMIHVASLIHDDVLDEAETRRGGLAVHKLYSNKVAVLAGDYLLARASVLLARLNNVEVVEIMATALDSLVQGEIMQLQSAPEDLLDMNHYLKKSYYKTASLICSACKSAALLAGHDFGSRTAIAAEEYGYHMGLAFQIIDDILDVTAAADVLGKPAMADMSLGLATAPLLYAAEEVPALRPLIKRRFK 381
[Close]
BLAST of mRNA_M-pyrifera_M_contig13348.5927.1 vs. uniprot
Match: A0A7S2XWR9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XWR9_9STRA)

HSP 1 Score: 375 bits (962), Expect = 7.520e-127
Identity = 191/269 (71.00%), Postives = 227/269 (84.39%), Query Frame = 1 
Query:   10 VDPFKLANKDLSPFTDTIKELVESEHPVLSMAAKHFFEKRHGKRFRPTIVALMALATCDKTMEDHRVSLEYTRQGQLGQITEMIHVASLIHDDVLDEAEVRRGGMAVHKLYSNKVAVLAGDYLLARASVLLARLNDVQVVEIMATALDSLVQGEIMQLKMDPEKMLDISQYLKKSYYKTASLITNACKSCALLGGHEFGSDVATAAEEYGYHMGLAFQIVDDILDIVGAADVLGKPAMADMSLGLATAPILYAAEGTPEIKKIIKRRFK 816
            +DPFKL   D++PF+  IKELV+++HPVL+MAA HFFEKRHGKRFRPT+V LMA A   +    +  + EY   GQLGQITEMIHVASLIHDDVLDEA+ RRGG AVHKLYSNKVAVLAGD+LLARASVLLARLN+VQVVE+MA ALD LVQGEI+Q K  PEK+L++  Y+KKSYYKTASLI N+CKS ALL G++F  +VA AAE+YGYHMGLAFQIVDD+LD   ++++LGKPAMAD+SLGLATAP+LYAAE  PE+K ++KRRFK
Sbjct:   84 LDPFKLVKDDIAPFSSNIKELVDTDHPVLTMAASHFFEKRHGKRFRPTVVTLMARALAPEGK--YTDTNEYALCGQLGQITEMIHVASLIHDDVLDEADTRRGGDAVHKLYSNKVAVLAGDFLLARASVLLARLNNVQVVEVMAMALDYLVQGEIVQAKSPPEKLLELEHYIKKSYYKTASLIANSCKSAALLWGNDFDGEVAAAAEKYGYHMGLAFQIVDDLLDFTVSSEMLGKPAMADVSLGLATAPVLYAAEEKPELKALVKRRFK 350
[Close]
BLAST of mRNA_M-pyrifera_M_contig13348.5927.1 vs. uniprot
Match: B8C3E2_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C3E2_THAPS)

HSP 1 Score: 366 bits (939), Expect = 1.850e-124
Identity = 190/264 (71.97%), Postives = 218/264 (82.58%), Query Frame = 1 
Query:   25 LANKDLSPFTDTIKELVESEHPVLSMAAKHFFEKRHGKRFRPTIVALMALATCDKTMEDHRVSLEYTRQGQLGQITEMIHVASLIHDDVLDEAEVRRGGMAVHKLYSNKVAVLAGDYLLARASVLLARLNDVQVVEIMATALDSLVQGEIMQLKMDPEKMLDISQYLKKSYYKTASLITNACKSCALLGGHEFGSDVATAAEEYGYHMGLAFQIVDDILDIVGAADVLGKPAMADMSLGLATAPILYAAEGTPEIKKIIKRRFK 816
            +  K+L PF D+IKELV ++ P+LSMAAKHFFEKRHGKRFRPTIV LMA A       +H+ S  + +Q QLGQI EMIHVASLIHDDVLDEA+ RRGG AVHKLYSNKVAVLAGDYLLARASVLLARL +  VV+IMATAL+SLV GEIMQLK  PE++L +  YLKKSYYKTASLI  AC+S ALLGGH +GS VATA EE+G+HMGLAFQI DDILD   AAD+LGKPA+ADMSLGL+TAPILYAAE  P ++ ++KRRFK
Sbjct:    1 MVEKELQPFADSIKELVSTDQPILSMAAKHFFEKRHGKRFRPTIVQLMAKA-------NHQGSEVWRKQAQLGQIVEMIHVASLIHDDVLDEADTRRGGEAVHKLYSNKVAVLAGDYLLARASVLLARLENTAVVQIMATALESLVAGEIMQLKASPEELLQMQSYLKKSYYKTASLICYACRSTALLGGHAYGSTVATACEEFGFHMGLAFQIQDDILDFTAAADILGKPALADMSLGLSTAPILYAAEEYPHLRPLVKRRFK 257
[Close]
BLAST of mRNA_M-pyrifera_M_contig13348.5927.1 vs. uniprot
Match: W7TZS0_9STRA (Polyprenyl synthetase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TZS0_9STRA)

HSP 1 Score: 374 bits (961), Expect = 6.480e-124
Identity = 197/284 (69.37%), Postives = 224/284 (78.87%), Query Frame = 1 
Query:    1 PEDVDPFKLANKDLSPFTDTIKELVESEHPVLSMAAKHFFEKRHGKRFRPTIVALMALATCDKTMEDHRVS------------LEYTRQGQLGQITEMIHVASLIHDDVLDEAEVRRGGMAVHKLYSNKVAVLAGDYLLARASVLLARLNDVQVVEIMATALDSLVQGEIMQLKMDPEKMLDISQYLKKSYYKTASLITNACKSCALLGGHEFGSDVATAAEEYGYHMGLAFQIVDDILDIVGAADVLGKPAMADMSLGLATAPILYAAEGTPEIKKIIKRRFK 816
            P DVDPF L  KDL+PF+D+IKELVE+E+PVL+ AAKHFFEKRHGKRFRPTI  LM+ A       D  V             L Y RQ QL QITEMIHVASLIHDDVLDEA+ RRG +AVHKLYSNKVAVLAGDYLLARASVLLARL +VQVVEIMA ALD+LVQGEIMQ K   + +LD+  YL+KSYYKTASLI N+C S ALLGG+ +GS    AAE+YGYH+GLA+Q++DD+LD  G ADVLGKPAMADM+LGLATAPILYAAE   E+K +IKRRFK
Sbjct:  201 PNDVDPFALVKKDLAPFSDSIKELVETENPVLTAAAKHFFEKRHGKRFRPTIAMLMSRAVQAGGAIDRDVGGAMATPMPVVDPLRYQRQSQLAQITEMIHVASLIHDDVLDEADTRRGDLAVHKLYSNKVAVLAGDYLLARASVLLARLENVQVVEIMANALDALVQGEIMQAKSSAKDLLDLGHYLRKSYYKTASLICNSCCSAALLGGYTYGSPTTVAAEKYGYHLGLAYQVIDDVLDFTGTADVLGKPAMADMTLGLATAPILYAAEEKKELKPLIKRRFK 484
[Close]
BLAST of mRNA_M-pyrifera_M_contig13348.5927.1 vs. uniprot
Match: A0A7S2CH76_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CH76_9STRA)

HSP 1 Score: 368 bits (945), Expect = 7.890e-124
Identity = 186/270 (68.89%), Postives = 230/270 (85.19%), Query Frame = 1 
Query:   13 DPFKLANKDLSPFTDTIKELVESEHPVLSMAAKHFFEKRHGKRFRPTIVALMALATCDKTMEDHRVSLEYTRQGQLGQITEMIHVASLIHDDVLDEAEVRRGGMAVHKLYSNKVAVLAGDYLLARASVLLARLNDVQVVEIMATALDSLVQGEIMQLKMDPEKMLDISQYLKKSYYKTASLITNACKSCALLGGHEFGSDVATAAEEYGYHMGLAFQIVDDILDIVGAADVLGKPAMADMSLGLATAPILYAAEGTPEIKKIIKRRFKKD 822
            +PF L +++L+PF+D IKELVE+++PVLS AA+HFFE+RHGKRFRPTIV LMA A   K   D++ +  Y +Q QLGQITEMIHVASLIHDDVLDEA+ RRGG AVHK+YSNKVAVLAGDYLLARASVLLA+L  V VV+IMA+ALDSLVQGEIMQ+K  PE  L++S YL+KSYYKTASLI +ACKSCA+LGGH   SD+  AAE++GYH+GLA+QI+DDILD    ++VLGKPAMAD+SLGLATAP+LYAA+ + +++ +IKRRFK++
Sbjct:   99 EPFGLVSEELAPFSDNIKELVETDNPVLSKAARHFFEQRHGKRFRPTIVMLMAKAVAGKL--DNQDTEMYMKQAQLGQITEMIHVASLIHDDVLDEADTRRGGEAVHKMYSNKVAVLAGDYLLARASVLLAKLECVNVVQIMASALDSLVQGEIMQIKSAPEDTLEMSYYLRKSYYKTASLICDACKSCAILGGHGINSDITLAAEKFGYHLGLAYQIIDDILDFTATSEVLGKPAMADVSLGLATAPVLYAAQQSKQLRPVIKRRFKEE 366
[Close]
BLAST of mRNA_M-pyrifera_M_contig13348.5927.1 vs. uniprot
Match: K0TLC1_THAOC (Uncharacterized protein n=2 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TLC1_THAOC)

HSP 1 Score: 369 bits (947), Expect = 1.420e-123
Identity = 195/293 (66.55%), Postives = 228/293 (77.82%), Query Frame = 1 
Query:   13 DPFKLANKDLSPFTDTIKELVESEHPVLSMAAKHFFEKRHGKRFRPTIVALMA--LATCDK-----------------------TMEDHRVSLEYTRQGQLGQITEMIHVASLIHDDVLDEAEVRRGGMAVHKLYSNKVAVLAGDYLLARASVLLARLNDVQVVEIMATALDSLVQGEIMQLKMDPEKMLDISQYLKKSYYKTASLITNACKSCALLGGHEFGSDVATAAEEYGYHMGLAFQIVDDILDIVGAADVLGKPAMADMSLGLATAPILYAAEGTPEIKKIIKRRFK 816
            DPFK+  K+L PF+D+IKELV ++ P+LSMAAKHFFEKRHGKRFRPTIV LMA  +A C                         T  +H+ S  + +QGQLGQI EMIHVASLIHDDVLDEA+ RRGG AVHKLYSNKVAVLAGDYLLARASVLLARL +  VV+IMATAL+SLV GEIMQLK  PE++L ++ YL+KSYYKTASLI  AC+S ALLGGH +GS VATA EE+G+HMGLAFQI DDILD   AAD+LGKPA+ADMSLGL+TAPILYAA+  P ++ ++KRRFK
Sbjct:  111 DPFKIVEKELQPFSDSIKELVSTDQPILSMAAKHFFEKRHGKRFRPTIVQLMAKAVAACPPETMRGDRWEDTGASRINLEGGAVTTANHKDSDVWRKQGQLGQIVEMIHVASLIHDDVLDEADTRRGGEAVHKLYSNKVAVLAGDYLLARASVLLARLENTAVVQIMATALESLVAGEIMQLKSSPEELLQMTSYLRKSYYKTASLICYACRSTALLGGHAYGSTVATACEEFGFHMGLAFQIQDDILDFTAAADILGKPALADMSLGLSTAPILYAAQEFPHLEPLVKRRFK 403
[Close]
BLAST of mRNA_M-pyrifera_M_contig13348.5927.1 vs. uniprot
Match: A0A7S2QV57_9STRA (Hypothetical protein n=1 Tax=Triparma pacifica TaxID=91992 RepID=A0A7S2QV57_9STRA)

HSP 1 Score: 366 bits (940), Expect = 4.180e-122
Identity = 192/288 (66.67%), Postives = 223/288 (77.43%), Query Frame = 1 
Query:   13 DPFKLANKDLSPFTDTIKELVESEHPVLSMAAKHFFEKRHGKRFRPTIVALMALATCDKTME-------------------DHRVSLEYTRQGQLGQITEMIHVASLIHDDVLDEAEVRRGGMAVHKLYSNKVAVLAGDYLLARASVLLARLNDVQVVEIMATALDSLVQGEIMQLKMDPEKMLDISQYLKKSYYKTASLITNACKSCALLGGHEFGSDVATAAEEYGYHMGLAFQIVDDILDIVGAADVLGKPAMADMSLGLATAPILYAAEGTPEIKKIIKRRFKK 819
            +PFKL   +L PF+D+IKELV S+ PVLSMAAKHFFEKRHGKRFRPTIV LMA A     +E                   +H+ S  + RQ QLGQI EMIHVASLIHDDVLDEA+ RRGG AVHKLYSNKVAVLAGDYLLARASVLLARL +  VV+IMATAL+SLV GEIMQLK  PE +L +  YL+KSYYKTASLI  AC+S ALLGGH +GS+VATA EE+GYH+GLA+Q+ DDILD  G A VLGKPA+ADM LGL+TAPILYAA+  P+++ ++ RRFKK
Sbjct:  147 EPFKLVEGELQPFSDSIKELVSSDQPVLSMAAKHFFEKRHGKRFRPTIVQLMAKAVAASNVEGLAGDSTTASKIASPINPQNHKGSEVWRRQAQLGQIVEMIHVASLIHDDVLDEADTRRGGEAVHKLYSNKVAVLAGDYLLARASVLLARLENTAVVQIMATALESLVSGEIMQLKSPPESLLQMESYLRKSYYKTASLICYACRSVALLGGHAYGSEVATACEEFGYHLGLAYQVQDDILDFTGVASVLGKPALADMDLGLSTAPILYAAQEYPQLRPLVMRRFKK 434
[Close]
BLAST of mRNA_M-pyrifera_M_contig13348.5927.1 vs. uniprot
Match: L1JNL9_GUITC (Geranylgeranyl pyrophosphate synthase n=2 Tax=Geminigeraceae TaxID=589343 RepID=L1JNL9_GUITC)

HSP 1 Score: 363 bits (931), Expect = 4.620e-122
Identity = 181/270 (67.04%), Postives = 226/270 (83.70%), Query Frame = 1 
Query:   13 DPFKLANKDLSPFTDTIKELVESEHPVLSMAAKHFFEKRHGKRFRPTIVALMALATCDKTMEDHRVSLEYTRQGQLGQITEMIHVASLIHDDVLDEAEVRRGGMAVHKLYSNKVAVLAGDYLLARASVLLARLNDVQVVEIMATALDSLVQGEIMQLKMDPEKMLDISQYLKKSYYKTASLITNACKSCALLGGHEFGSDVATAAEEYGYHMGLAFQIVDDILDIVGAADVLGKPAMADMSLGLATAPILYAAEGTPEIKKIIKRRFKKD 822
            DPF L  ++LSPF+D+IK++V+++HP+LS AAKHFF +R GKRFRPTIV LMA AT     E HR    Y +Q +LGQITEMIHVASLIHDDVLDEA+ RRGG +VHKLYSNKVAV+AGDYLLARASV+LARL + +V EIM+TAL+SLVQGEIMQ+K   + +LD+  YL+KSY+KTASLI +ACKSCA+L GH   S+ A AAEEYGYH+GL++QI+DD+LD  GA+DVLGKPAMAD+SLGL+TAP+LYAAE   E+K +I+R+FK++
Sbjct:   73 DPFALVKEELSPFSDSIKDVVDTDHPILSEAAKHFFAERQGKRFRPTIVMLMAKATAPNPKE-HRSGPVYEKQAELGQITEMIHVASLIHDDVLDEADTRRGGESVHKLYSNKVAVIAGDYLLARASVVLARLENTEVTEIMSTALESLVQGEIMQIKTGEDDLLDMMTYLRKSYHKTASLICDACKSCAILAGHAADSEEANAAEEYGYHLGLSYQIIDDVLDFTGASDVLGKPAMADVSLGLSTAPVLYAAESIAELKPMIRRKFKQE 341
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig13348.5927.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FMC2_ECTSI1.740e-17494.16Solanesyl diphosphate synthase-like protein n=2 Ta... [more]
A0A835YRD5_9STRA2.750e-14178.07Isoprenoid synthase domain-containing protein n=1 ... [more]
A0A835Z077_9STRA1.090e-13776.21Isoprenoid synthase domain-containing protein n=1 ... [more]
A0A7S2XWR9_9STRA7.520e-12771.00Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
B8C3E2_THAPS1.850e-12471.97Uncharacterized protein n=1 Tax=Thalassiosira pseu... [more]
W7TZS0_9STRA6.480e-12469.37Polyprenyl synthetase n=2 Tax=Monodopsidaceae TaxI... [more]
A0A7S2CH76_9STRA7.890e-12468.89Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
K0TLC1_THAOC1.420e-12366.55Uncharacterized protein n=2 Tax=Thalassiosira ocea... [more]
A0A7S2QV57_9STRA4.180e-12266.67Hypothetical protein n=1 Tax=Triparma pacifica Tax... [more]
L1JNL9_GUITC4.620e-12267.04Geranylgeranyl pyrophosphate synthase n=2 Tax=Gemi... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig13348contigM-pyrifera_M_contig13348:164..8733 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score500.0
Seed ortholog evalue7.2e-139
Seed eggNOG ortholog2880.D7FMC2
KEGG rclassRC00279
KEGG koko:K14066
KEGG ReactionR01658
KEGG Pathwayko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130
KEGG ModuleM00366
Hectar predicted targeting categoryother localisation
EggNOG free text desc.isoprenoid biosynthetic process
EggNOG OGsCOG0142@1,KOG0776@2759
Ec32 ortholog descriptionsolanesyl diphosphate synthase-like protein
Ec32 orthologEc-17_003520.1
EC2.5.1.1
COG Functional cat.H
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01006
Exons6
Model size822
Cds size822
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig13348.5927.1prot_M-pyrifera_M_contig13348.5927.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig13348 164..8733 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815814.5311751-CDS-M-pyrifera_M_contig13348:163..3321622815814.5311751-CDS-M-pyrifera_M_contig13348:163..332Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig13348 164..332 +
1692277583.9782407-CDS-M-pyrifera_M_contig13348:163..3321692277583.9782407-CDS-M-pyrifera_M_contig13348:163..332Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig13348 164..332 +
1622815814.5450668-CDS-M-pyrifera_M_contig13348:3636..37041622815814.5450668-CDS-M-pyrifera_M_contig13348:3636..3704Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig13348 3637..3704 +
1692277583.9993427-CDS-M-pyrifera_M_contig13348:3636..37041692277583.9993427-CDS-M-pyrifera_M_contig13348:3636..3704Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig13348 3637..3704 +
1622815814.5592546-CDS-M-pyrifera_M_contig13348:4434..46201622815814.5592546-CDS-M-pyrifera_M_contig13348:4434..4620Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig13348 4435..4620 +
1692277584.010112-CDS-M-pyrifera_M_contig13348:4434..46201692277584.010112-CDS-M-pyrifera_M_contig13348:4434..4620Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig13348 4435..4620 +
1622815814.5723555-CDS-M-pyrifera_M_contig13348:6714..69031622815814.5723555-CDS-M-pyrifera_M_contig13348:6714..6903Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig13348 6715..6903 +
1692277584.0285983-CDS-M-pyrifera_M_contig13348:6714..69031692277584.0285983-CDS-M-pyrifera_M_contig13348:6714..6903Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig13348 6715..6903 +
1622815814.5828595-CDS-M-pyrifera_M_contig13348:8213..83031622815814.5828595-CDS-M-pyrifera_M_contig13348:8213..8303Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig13348 8214..8303 +
1692277584.0392535-CDS-M-pyrifera_M_contig13348:8213..83031692277584.0392535-CDS-M-pyrifera_M_contig13348:8213..8303Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig13348 8214..8303 +
1622815814.5946562-CDS-M-pyrifera_M_contig13348:8613..87331622815814.5946562-CDS-M-pyrifera_M_contig13348:8613..8733Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig13348 8614..8733 +
1692277584.0490816-CDS-M-pyrifera_M_contig13348:8613..87331692277584.0490816-CDS-M-pyrifera_M_contig13348:8613..8733Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig13348 8614..8733 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig13348.5927.1

>prot_M-pyrifera_M_contig13348.5927.1 ID=prot_M-pyrifera_M_contig13348.5927.1|Name=mRNA_M-pyrifera_M_contig13348.5927.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=274bp
PEDVDPFKLANKDLSPFTDTIKELVESEHPVLSMAAKHFFEKRHGKRFRP
TIVALMALATCDKTMEDHRVSLEYTRQGQLGQITEMIHVASLIHDDVLDE
AEVRRGGMAVHKLYSNKVAVLAGDYLLARASVLLARLNDVQVVEIMATAL
DSLVQGEIMQLKMDPEKMLDISQYLKKSYYKTASLITNACKSCALLGGHE
FGSDVATAAEEYGYHMGLAFQIVDDILDIVGAADVLGKPAMADMSLGLAT
APILYAAEGTPEIKKIIKRRFKKD
back to top

mRNA from alignment at M-pyrifera_M_contig13348:164..8733+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig13348.5927.1 ID=mRNA_M-pyrifera_M_contig13348.5927.1|Name=mRNA_M-pyrifera_M_contig13348.5927.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=8570bp|location=Sequence derived from alignment at M-pyrifera_M_contig13348:164..8733+ (Macrocystis pyrifera P11B4 male)
CCGGAAGACGTCGACCCTTTCAAGCTGGCGAACAAGGACTTGTCGCCGTT
TACGGACACCATCAAGGAGCTGGTGGAATCGGAGCACCCCGTGCTTTCGA
TGGCGGCGAAACATTTCTTCGAGAAGAGGCACGGGAAGCGCTTCCGGCCC
ACCATCGTCGCCCTCATGGGTAAGAAAAACAGAGGGGGTAGGGGGGAGGG
GCGTACTCGTTCGTTACTCGCCTTGATAATGTATTCACTGACCACGCATC
CCTTTCGAGACGAGGCACCGGGGGGGAGGGGGGAGGGGGAGGCTGTTTTA
GGGGTTTGCCGTCATTTCATCCCGCGTCCAGCTGGAAGCCTCAGAAGAAA
CGAACTTCCCTTCGTAGAAAATGTGAGGAACCCTTCAGACTGCAGTACAG
TAGTGGTGCCTCTGTAGTGCCCGCTGCTCGCCATATATAGTGCATGTGGA
ATCGCTTGGCGCAGGTGGGATGATTAACCAGTGTGGTAGTGTGCGGAGTA
ATTAGTGCCGGTTGGTTGCCGCTATATATAGTGCCGGTATTGTTGGCCGG
CGAATACCAGACCGGCACTATTAAGAGGAATTCGTTAGGTCACGTGTCAT
TATTTTACAAGGCAGCCCTACTGTAGAATATATACTAGGTAGAGCCCGTA
TACCCCTACTTTTGCGCTTGGAAAAATTGGTTGGCGCAGACAGGTGGGAT
GGACCAGTGTGGTAGTGTGCGGAGTAATTAGTGCCGGTTGGTTGCCGCTA
TAATTTTTGCCCTGTTGGCTGGCAGCATCCAGGGGAGCCGCTGGCCTATA
TCTTTGACAAGGAGTCACATATAGAATACGCGCGCTCGGTTTANNNNNNN
NNNTAAAATTCAGTAAACATGGAATATAGACGAGACGTGTTACGCAGCTT
GCAAAGTTGAGTATCAACTAGTTAATCAGTCGAACTCACAGCTGACGTAT
TTCAAAATTTATAAAAATTTTGCCGGTAGTATTGACTGCCGCATGCATAT
CGGCACTATAGAGGGGCCACTACTCTGCACTGCTGCACTGCTGTAGAATG
GAGGTACAGCTGCACCCACGTTTTGGAGACAAAAGCAGAGCTGCACCCAC
CTTCTGCAAATAAATTTCTTGGAATTTTCGAGGTGGCCTTTTTTTCGCGG
TACCACATGTTATTAATAGTACCAGGGTTATTGACCCCTCTTGGGCTGCA
CTCCCGTTCAGGAGACAAATTACTTGGAATTATAGGGCTATTACTGGGGT
ACCTATTTTGTAGATGATACGTAGAACTGCGTACCGTACCGTACTGGGTG
ATAGACAACACACCCCCTGCGACGAATTTCATACACGGTTTCTTCGAAAA
CATGGGCGGGCACACGACGAAAACGGTGGCTTTCGAAATATTTGGTCGAG
AAGGTTGCACAGACGCATCGGTTGTCGTACTCGGTACGCCCTCCCTGTTG
TCGAGAGACCCGACTGTAAAAGTCGTCCGAGGGGGTGTGTTATATTCCCA
CCCTATTACGGGGGTCCATAGTTAATAGGACATATGGTGCACAAAAAACC
TATATATTTACCTATTTTTACTAACAATATTTGGTCCCGTTGACTGTGGA
CCCCCTTAATAGTGTGGTAGGGTAATACTGCTGTAATATGTGCCCGGTAT
ATACCTCAATTTCCCACGAGACGGGTCAAAACCCACGATTGATTCCAAAA
CCAGGTACTGTTACGTACTCCCCCAAGTTCACCCACACCCTATTCGGCTG
TGATTACTATTAGTATTAATTTAATGTTAATAGTATTATATTCAGTGCGT
AGAGCTTACCACTCAGTCGATGAAATGGTTGGCACCCTGCTGAGCAGGGA
CTACTTACTAGTGCTGTTACTTAGTATTGTCAACTATTTTACGGGGAACC
ATAATAAATAGGACCAAATATTTATGGTAGATTAGGTAAATATATAGGTT
TTTGTGTGTACCGTAGGTCCTATTTACTAGGGTCCCCCGTAGTGGTAGTT
GATTGGTTCTGATTGTCTTGGTTACGGTTACGTCTGTGTTGTATGTGTTC
TTCATGTTTAACCGTTCTTTCTACCCGTCGACATCCAGCACAACCAGTGT
CCGTGCCGATTCTTGAATCCTAGAAGAGACACAACAAGTTCTGTGGTCAC
AAAGCTACGCCACGGAGATACTACATTGTTCTGTGTTATGCAGTAAGCAG
AGTGGACCATCATGCAATGCCATGCCATTATACTGGATGTGCGACAGGCA
CGACATACACATTCCATGAAAAGAGAGATAGCAGAAGGAACAAACGAAAA
AAAGAATAGAAGGAAAACCCCCCCCAGTAGATAAGGGAACAAATCGAAAG
AGAAAAAGAAAGAAAGAAAGCTATCGTTAGCTTTTGTTCGTCTCCTTCAG
GGTGACCCTCGATCATATTCTCGATTAAATTGTTCTGTATGCTGTGAGCT
GTGAGCTCCTCTCATTATCGTATGAGATCGAGGATGTGGTCAAAATTCAT
CTGTGCAATCATATGTTCCCCCGTCATCAACCATTGAGTCAAGTTTATTC
CAACCATTTTTTCGAGGCTCTGCCTTGGTCCATCCACCCTTCCAGGCTAT
GATATGTTGAACGACTTTGTAGAAGTGACATGTACTACTAATAATACTAA
TAATAATACTGCTGCTGTACCTGCCGCTGTACCCTCGTTTCGGATAAGCT
TGTGCTCTGACTACTGCTGTAGTTTTTTTTCCCGTGTGTTTTCTCGTACG
TATTGTTGTGTTGTTGCTGTTCTCACATTACCTCATGTCCGAAAAAAAAA
AATTGAGTCCGTGGTCACAGGACGCGCTCCCAAAATCGGAGCGGAAGCAT
ACCTCGGGGAGAAAAAACTTTGTGTACCGCTTGGCCCAGCTTTGATGAGG
AATTGTGTTGACACCAGCTATTGTAGTGTGCACCTGCTTTCAATGATCGT
TTTGTCCGAGCTTGAGCCCAAATCGTACACGCTCGTACTATGGCCAGTCT
GTAACGGACGTAGTTGGTTTGCTGCTATTACGGGAGTCCATAGTTAATTG
GACCTATGGTATAAAAACCTATATATTTACCTATTTTTACTAACAAAATT
TGGTCCCATTAACTATGGACCCACTATGGACCCCCGTAATAGTTCTTATT
GTTCGCGTGAGCATATCACATAGCCTTCAAAAAGTTGAGTATCGGCCCCT
GAATCGACGGAACTCACAGCCGACGATTTTTTTTTTTTGGAATAAGTTTG
TTGAAATCAAATTCCCAAGACGGTATATAATACGCACTAAACAAGCGGCG
GGTTCTGTTGCCGACCTTTCCCCTCCTACGTACTTTTAACTGTTTGTTTT
TTTGTGCTTCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT
CTCTCTGTCTGTTCGCAACATGTGGTATGTGTGGTGGTGATGGTGGTGGT
GGTGGTGGGAACGATGCTCGCAGCGCTCGCAACGTGCGACAAGACCATGG
AAGACCACAGGGTTAGCCTGGAATACACTCGACAAGGGCAGGTGAAAATC
GAACTCGAAATCTCCAAACTCTTGACTTTAATCAAATGTCGAAACCAAAA
AGACTCGAAACCCGAACTACTGTAAATAAACTCCAAACCGAAGTCAAAAC
TCGGGGACTCGAAACCCGAACTACTGTAAATAAACTCCAAACCGAAGTCA
AAACTCGGGCCCGAAGTCGAGCTCGAACTCCCAAAGTCGAAATGTAAATA
TGCCCACAGAGGAGAGCTGGGATGGCCTTGAATGAACGCGAGTAGCGGGT
GAAATCCGAATTCAATGTCAAAGTCATTTTCGAGATTCTACCTAAAACAC
ACATCACTTCATACCTGGAGTCAAAACTCAGGACCAAAAGTCGTGGAAAC
TCAATAAACTCGGCCTTCAAATTGAAAATCGAACTTTTTTGTAACGCAAA
ATCAGACTCAACCTCAAGCTCTGCGAAACTCAAACCCCAAAAATCCGTTC
AATTTAAGTTCAAAGCAAACCCAAACTTGAGCACGAGAGCACGGGTGACA
TGCGGGAATGTGTGTACAGCAGTAGATATGTGCTATTGTAGCTGTTGTTG
TCGTTCGTTTGTCATTCATGCTTTTTTTTCCACAACTCGCAGCTTCTACT
ACTACGTTCACCTCGCGTGTTATTTGGTGTTAATTTTCTTCTTTTTTCCC
GTTTTTTTCCCTGTTTTTTCCCCTTTTTTTTCTCGTTTTTTTCCCGTTTT
TTTTCTTTTTCGTTTTTACAGCTCGGGCAGATCACGGAAATGATCCACGT
GGCGTCCTTGATCCACGACGATGTCCTGGACGAGGCGGAGGTGAGGAGGG
GGGGCATGGCGGTACACAAGCTCTACAGTAACAAGGTGGCGGTGCTCGCG
GGCGACTACCTGCTGGCACGAGCGTCTGTGCTGCTGGCGAGGCTGAACGA
CGTGCAGGTACGCAAATCGAAGTGGACCAATCAGCGAGCGCTCGGTCATC
TGTGGACCAATCAGCGGTCGGTCAGCTGTGATCTGACGCAAACCGGACCG
ATAAGCGGTCAGTTGTTGCTTGGCGTACGTGCGAAGTGGAACAACCAGCA
AACGCTCGGTCAGCTATGACTTGGCGTGCGTGCGAAGTGAACCAATCATA
GGTCGGTCGTCTGTAACTTGGCGCGCTTTGGATCAATGAGGGGTCGGTCA
GCTGTGGCTTGACTCATAGTGGACCATTCAACAAGCGATCGGTCAGCTGC
GACTTGACGAATCAGCTTGAACTTGGCATGCGTGCGAAGTGGCCCAATCA
GTGAGCGCTGGATCAGCTGTGACTTGACGCTAAGGTAACCAATCAGCGGT
CGGTCAGCTGTGACTTGCGTCAAAGCGGACCAATGAACGGCCAGCCGTGA
CTTGGCGCACGTGCGAAATGGACCAATCAGTGAGCGCTCAGTCAGCTGTG
TATCGACGCGAAGTGGACCAATTAGCGGTCCGTCAGCTGTGGCTCGACGC
CAACTGGACCAATGAGCGCCCAGCCGTGACTTGACGTGCGTTATTCCTTG
TCAACTGTGCCCCAAGCCTGTGGAGACCAATTGTCAACATGCGTACTGTA
CTTGAAGTCAGGAAACTGGAGCCCGGTACTTTTTGCGGTTCTTTCGGGAC
TGGCCTCTTAGTGTGGCGACCTAAAAAGCTCCGGAGTGCCGTCTTATCGC
ACTTCTATTAAAGGGGAACACAGTGGTCAGGACCTAATATGCCTTGTAAA
CATAAGAGAGGTGCATGATTCTGAGTCCATCGTGGGTTCTGATTACAACA
TTAGCCCACCCCGTGATCGGAAAAGCTTACCGCAAGGCTGCGAAAACCGA
GTGGACCGAATCCGTCCCAGGAAAGCTTCTCAACGAGATCTCTTTCCTAA
ACCACCCTCTTCCTTTTGCCTTTGTTGGCGCCCTCCCCGCGGCTGTCGAG
CAGTCATTCGTTTTCTTTGAGTGACTTACTAATGCCTCACTAATCGTACA
TAGCTCCACAAGAGACGAGCCTCAGAAGGCAAGATTGGTGCAGCTACTGC
TGTAGCACCCTTTTACCGTGGCGTGCGTGCGCCATCAGTCAAATGAGGCC
AAACCAAATCACGGTGATCCTCTCTCTTTTTTTTTTTTAACCGTTTCATC
ATCGTCGTCGTGACAATGGTTGATCAACCAGGCAACCCTCATGGAGTACT
TTGGAGAAGGCGGGGGGACGGGGGGGGGACGGGGGGGAATGACGATAGAG
CATGACGATTGCGGTCGACGGCCACTATCTGGTGCCACTTTTGCGTGATT
AGCCGGGGGGGGGGGGGGAACCACACAAGTTGGTGTCCCCGGGGTGCAAT
GCGAGCAGTCGTACGGCACGGGCCAGTGCCGCTGTGCGTTCCTCACGCTG
GTGCCCGTAGACGGCTACTAACACCACACAGGTATATCAATGTTTACTGT
AGGTCTCACTCTCTCGCTCGTTGTCCCGAAGGGGTTGGTTATGGTGCGCA
CGGCAAGCGCCGCAAAGGCCGACAGTTATTTTTCGGGTCACGACGGATTT
TTGCGCCTCTCCTTATCTACATACACACCTGTTTCAATCTGGCAAAAAAA
AAGTGCGTCGAAAGCAAGTAGGAAAAACGAAAAACGGATTTACGTAATAT
GTACTTCGTATATGTTCCTTATGTACCGGCAGGTAAACGGGAGAGGAGCA
TAAACATAAACGGAAGCAAGTAAACAAATAGGCCAAACGAAAAGACACGG
GAACGAAAAACGGAAGGGAAAACTACCATGAATATTAAACCGAACATGCT
CAGGGCATATCTTAACGGGGACTTTCGGCTCTGTCAATTTTATTTGATTT
TTTTGTTTCTGATTTAATTTAGGGGGCCCCTCTTATCGAGGGCTTTCGGT
TCTTTTACTTTGATTGGATTTTTTTTTTTTTGTAATTTAATTTACATCTG
ATTGAACGAAATTTAGTGTTCCCCGTTGAGATGGGCTCCTACCAGGTACC
AGGTTGATGAACAGCACAAAAACGGTCTCCTGTATGTACCTTGCATCCCA
GGTTGTGGAGATAATGGCGACCGCCCTTGACAGCCTGGTTCAGGGCGAGA
TCATGCAGCTCAAGATGGACCCGGAGAAGATGCTGGACATCTCGCAGTAC
CTCAAGAAGAGCTACTACAAGACGGCCAGCCTCATCACGAATGCCTGCAA
GTCGTGCGCTTTGCTGGGTGGTCACGAGTTCGGTAGCGATGTGAGCCTCC
CCGCGTTGATAGGAGGATCGATGGGAAGAGACGGGGGGCGGGGCAGGAGA
GAGAAACTCCGCCGTCGTCGATTGAGCGTTGGTTGGGTTCATTGGCTGGT
TGATTCGACTGATTTAATTGATTGTTCAGTTGGTTGAACGATAGGATAGT
TGGTGGGTCGGTCGATCGTTGTTCCCCCAACTTTCTGCCAGAATCCAGTA
TCCAGTATGTTTAGTTTTTTGTTAGTATCATATTTACCAAGCTCGAGCCC
TTCTTTATCTGTTGGGTTTTGATTGTGTCCCACTCTTTCTGTTTGTGTGG
ATGTTTTTTTCTATCTAAGACTGTTCCGTATCTCTGTGTGTGTGGTTTTC
GTGAAATCTGTTTTTGTTCGCCCCCCCCCCCCCCCAACATTTCTCCTCAG
TCCCAAAGGTGTTGGTCGAACGGCAGGGCAACAAGTAATGCCTGTCGCTC
TTTCTAAACACATCAAACATGCACCTCGCTGAGTGAACGGGCATGGACAT
CACCAGATTGGTCTTTTTTTTTCTTGTCGATCGGCCCTACTGGTATTTTA
TACGTTCCTTGCTCAACCATTTTAGCACCGCAGTCCCTTTTCTGGGACAA
AGTACTCTAATTTCAAGTAGTTTGTCCCCAAAACGGGAATGGGGTACTAC
AAGGGTTTTATAATCCTTTCATTTATTTCACTACTGCTGTAGCATGTCAC
CGCACTAATTCCACGTGATTGTACCTGAAAACGCGGGTGCGATGCCCAAA
AGTCATTATTTTCTTTTTTTTTTCCGGACCGCTATAGCAATGAGTGCAAT
CTACGGCAGGTACTACAATACCAGGTAGTATTTATTCATTTTTTTAGTTC
GGGGAGACGAAAGCTAGACAGTATTTGTTCATTTTTTTTAATTCGGGGAG
ACGAAAACTACACGACAACTGTAGTATTCGTTCATTTTTTTAATTCGGGG
ATTCGGGGAGACCAAAACTACAACAGTATTTTGTTAATTTTGTTTAATTC
GGGGAGACGAAAACTACGACAGTATTTGTTCGTTTTTTTAATTCGGGGAG
ACGAAAAGCTACTCTGCGACGAGATACCGCTTTGATTTTTCATCGAATCG
ACGCTGAGGTGCGGAGAGGAGTAAGCCCTCGGTGAGAGTCTCCAGCTGAT
CGCACCAGAGAGGGGCGGAGGCACCGCCGTTGTTCGCAAGCTACCGGTAA
ACTCCGTCCGATACGAGTCGAAGCGACGACTGAAAGTTCAACAACCCATA
TATTTATTTTTCTTGTTTTCCTTTTTGTTTTTCTTGTTTTTTTTTTTTAG
GTGGCCACGGCAGCGGAGGAGTACGGCTACCACATGGGACTAGCCTTCCA
AATAGTGGACGATATTCTCGACATTGTGGGGGCCGCGGATGTGAGTTGGG
TTCCGTCAGTTCGTTCGGCTCGTGTTGTGTGTCTTATGTACGGTGCCGGT
TTTGTATTTTTGTTGAAATTTATATTTGCTTTTATTTTATGATTTATTCA
TTTTATTTTTTGTGTTTGCAGCTTTCGCGGTCTTGTTTTTTTTGTTTTTT
GTTTTTCGTTTTTTCGTTGCCTCTGGCCGGCCGGCCTGTGTTGTTGTTGT
TGTTGTTGTTGTTGTTGTTGTTTTCCGTTCTTTCCCTTCGCCCCGACTTT
TTTTTTTGGTGAATGCCGTGGGGAATATGTGTGCGTGCGCGCGTTGACAG
GTGCTGGGGAAGCCCGCCATGGCGGATATGTCGCTGGGGCTAGCGACTGC
ACCCATCTTATATGCCGCGGAGGGCACGCCTGAGATCAAAAAGATTATCA
AGCGCCGGTTTAAGAAAGAT
back to top

Coding sequence (CDS) from alignment at M-pyrifera_M_contig13348:164..8733+

>mRNA_M-pyrifera_M_contig13348.5927.1 ID=mRNA_M-pyrifera_M_contig13348.5927.1|Name=mRNA_M-pyrifera_M_contig13348.5927.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1644bp|location=Sequence derived from alignment at M-pyrifera_M_contig13348:164..8733+ (Macrocystis pyrifera P11B4 male)
CCGGAAGACGTCGACCCTTTCAAGCTGGCGAACAAGGACTTGTCGCCGTT
TACGGACACCATCAAGGAGCTGGTGGAATCGGAGCACCCCGTGCTTTCGA
TGGCGGCGAAACATTTCTTCGAGAAGAGGCACGGGAAGCGCTTCCGGCCC
ACCATCGTCGCCCTCATGGCCGGAAGACGTCGACCCTTTCAAGCTGGCGA
ACAAGGACTTGTCGCCGTTTACGGACACCATCAAGGAGCTGGTGGAATCG
GAGCACCCCGTGCTTTCGATGGCGGCGAAACATTTCTTCGAGAAGAGGCA
CGGGAAGCGCTTCCGGCCCACCATCGTCGCCCTCATGGCGCTCGCAACGT
GCGACAAGACCATGGAAGACCACAGGGTTAGCCTGGAATACACTCGACAA
GGGCAGCGCTCGCAACGTGCGACAAGACCATGGAAGACCACAGGGTTAGC
CTGGAATACACTCGACAAGGGCAGCTCGGGCAGATCACGGAAATGATCCA
CGTGGCGTCCTTGATCCACGACGATGTCCTGGACGAGGCGGAGGTGAGGA
GGGGGGGCATGGCGGTACACAAGCTCTACAGTAACAAGGTGGCGGTGCTC
GCGGGCGACTACCTGCTGGCACGAGCGTCTGTGCTGCTGGCGAGGCTGAA
CGACGTGCAGCTCGGGCAGATCACGGAAATGATCCACGTGGCGTCCTTGA
TCCACGACGATGTCCTGGACGAGGCGGAGGTGAGGAGGGGGGGCATGGCG
GTACACAAGCTCTACAGTAACAAGGTGGCGGTGCTCGCGGGCGACTACCT
GCTGGCACGAGCGTCTGTGCTGCTGGCGAGGCTGAACGACGTGCAGGTTG
TGGAGATAATGGCGACCGCCCTTGACAGCCTGGTTCAGGGCGAGATCATG
CAGCTCAAGATGGACCCGGAGAAGATGCTGGACATCTCGCAGTACCTCAA
GAAGAGCTACTACAAGACGGCCAGCCTCATCACGAATGCCTGCAAGTCGT
GCGCTTTGCTGGGTGGTCACGAGTTCGGTAGCGATGTTGTGGAGATAATG
GCGACCGCCCTTGACAGCCTGGTTCAGGGCGAGATCATGCAGCTCAAGAT
GGACCCGGAGAAGATGCTGGACATCTCGCAGTACCTCAAGAAGAGCTACT
ACAAGACGGCCAGCCTCATCACGAATGCCTGCAAGTCGTGCGCTTTGCTG
GGTGGTCACGAGTTCGGTAGCGATGTGGCCACGGCAGCGGAGGAGTACGG
CTACCACATGGGACTAGCCTTCCAAATAGTGGACGATATTCTCGACATTG
TGGGGGCCGCGGATGTGGCCACGGCAGCGGAGGAGTACGGCTACCACATG
GGACTAGCCTTCCAAATAGTGGACGATATTCTCGACATTGTGGGGGCCGC
GGATGTGCTGGGGAAGCCCGCCATGGCGGATATGTCGCTGGGGCTAGCGA
CTGCACCCATCTTATATGCCGCGGAGGGCACGCCTGAGATCAAAAAGATT
ATCAAGCGCCGGTTTAAGAAAGATGTGCTGGGGAAGCCCGCCATGGCGGA
TATGTCGCTGGGGCTAGCGACTGCACCCATCTTATATGCCGCGGAGGGCA
CGCCTGAGATCAAAAAGATTATCAAGCGCCGGTTTAAGAAAGAT
back to top