mRNA_M-pyrifera_M_contig13333.5920.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig13333.5920.1 vs. uniprot
Match: D7G659_ECTSI (NADAR domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G659_ECTSI) HSP 1 Score: 167 bits (424), Expect = 8.140e-50 Identity = 79/110 (71.82%), Postives = 88/110 (80.00%), Query Frame = 1
Query: 1 RYCNAEQWMMASKARLFNDGEAYGKIMRTQDPREHKALGRQVRGFDASTWDARGFDLVVKGNLAKFRQNPLFMQNLLATGSKILGEASPSDREWGIGLHASDPDALNQMR 330
RYCNAEQWMMASKARLFND A +IM T DPR KALGRQVRGFD + WD +G+D+VV+GNLAKF+QNP F LLATG +IL EASP D EWGIGLHA+D DAL Q R
Sbjct: 83 RYCNAEQWMMASKARLFNDRTALQQIMATADPRRQKALGRQVRGFDPAMWDKKGYDVVVRGNLAKFKQNPGFRDELLATGDRILAEASPYDSEWGIGLHANDADALIQAR 192
BLAST of mRNA_M-pyrifera_M_contig13333.5920.1 vs. uniprot
Match: A0A6H5L2E7_9PHAE (NADAR domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2E7_9PHAE) HSP 1 Score: 164 bits (416), Expect = 7.090e-49 Identity = 79/110 (71.82%), Postives = 86/110 (78.18%), Query Frame = 1
Query: 1 RYCNAEQWMMASKARLFNDGEAYGKIMRTQDPREHKALGRQVRGFDASTWDARGFDLVVKGNLAKFRQNPLFMQNLLATGSKILGEASPSDREWGIGLHASDPDALNQMR 330
RYCNAEQWMMASKARLFND A +IM T DPR KALGRQVRGFD + WD G+D+VV+GNLAKFRQNP F LLATG +IL EASP D EWGIGL A+D DAL Q R
Sbjct: 82 RYCNAEQWMMASKARLFNDRTALQQIMATADPRRQKALGRQVRGFDPAVWDKTGYDVVVRGNLAKFRQNPGFRDELLATGDRILAEASPYDSEWGIGLKANDADALIQAR 191
BLAST of mRNA_M-pyrifera_M_contig13333.5920.1 vs. uniprot
Match: A0A3M2KXF5_9NOCA (NADAR family protein n=2 Tax=Nocardia stercoris TaxID=2483361 RepID=A0A3M2KXF5_9NOCA) HSP 1 Score: 124 bits (310), Expect = 7.810e-34 Identity = 60/106 (56.60%), Postives = 74/106 (69.81%), Query Frame = 1
Query: 4 YCNAEQWMMASKARLFNDGEAYGKIMRTQDPREHKALGRQVRGFDASTWDARGFDLVVKGNLAKFRQNPLFMQNLLATGSKILGEASPSDREWGIGLHASDPDALN 321
Y +AEQWMMA+KARLF D A I+ + P E KALGR+VRGFD + W A F+LVV+GN+AKF Q+ LL TG ++L EASP DR WGIGL A+DP A +
Sbjct: 33 YASAEQWMMAAKARLFGDEAAVAPILAARTPAEAKALGRKVRGFDENRWAAECFELVVRGNVAKFGQDSALRDYLLGTGQRVLVEASPRDRIWGIGLSATDPAATD 138
BLAST of mRNA_M-pyrifera_M_contig13333.5920.1 vs. uniprot
Match: UPI00036309F7 (NADAR family protein n=2 Tax=Micromonosporaceae TaxID=28056 RepID=UPI00036309F7) HSP 1 Score: 122 bits (307), Expect = 4.110e-33 Identity = 62/110 (56.36%), Postives = 75/110 (68.18%), Query Frame = 1
Query: 1 RYCNAEQWMMASKARLFNDGEAYGKIMRTQDPREHKALGRQVRGFDASTWDARGFDLVVKGNLAKFRQNPLFMQNLLATGSKILGEASPSDREWGIGLHASDPDALNQMR 330
RY AE +MM KARLF+D +I+ T P KALGRQVRGFD +TWDA FDLVV GN+AKF Q+P + L TG+++L EASP DR WGIGL A+DP A + R
Sbjct: 59 RYVTAEHYMMVGKARLFSDEAIAARILTTPHPGAVKALGRQVRGFDQATWDAHCFDLVVAGNVAKFSQHPDLGRYLSRTGNRVLVEASPVDRVWGIGLSATDPRAHDPAR 168
BLAST of mRNA_M-pyrifera_M_contig13333.5920.1 vs. uniprot
Match: A0A4P9VQS0_9GAMM (NADAR family protein n=2 Tax=Zooshikella ganghwensis TaxID=202772 RepID=A0A4P9VQS0_9GAMM) HSP 1 Score: 121 bits (303), Expect = 6.370e-33 Identity = 60/109 (55.05%), Postives = 69/109 (63.30%), Query Frame = 1
Query: 4 YCNAEQWMMASKARLFNDGEAYGKIMRTQDPREHKALGRQVRGFDASTWDARGFDLVVKGNLAKFRQNPLFMQNLLATGSKILGEASPSDREWGIGLHASDPDALNQMR 330
Y AE +MMA KA+LFND Y KI+ T P E K LGR++ GFD W A FD+VVKGNLAKF QNP LL T ++L EASP DR WGIGL A DA N +
Sbjct: 22 YHTAEHYMMAEKAKLFNDQRLYKKILTTSHPSEAKRLGREIIGFDERIWRANRFDIVVKGNLAKFSQNPTLQDYLLGTQQRVLVEASPVDRIWGIGLAADHADATNPTK 130
BLAST of mRNA_M-pyrifera_M_contig13333.5920.1 vs. uniprot
Match: A0A1T4RAV5_9ACTN (NADAR domain-containing protein n=2 Tax=Marinactinospora thermotolerans TaxID=531310 RepID=A0A1T4RAV5_9ACTN) HSP 1 Score: 122 bits (305), Expect = 9.180e-33 Identity = 60/109 (55.05%), Postives = 72/109 (66.06%), Query Frame = 1
Query: 4 YCNAEQWMMASKARLFNDGEAYGKIMRTQDPREHKALGRQVRGFDASTWDARGFDLVVKGNLAKFRQNPLFMQNLLATGSKILGEASPSDREWGIGLHASDPDALNQMR 330
Y AE WMMA KA LF D EA G+I+ + P E K LGRQVRGFD TW A FD+VV+G++ KFR +P L+ TGS++L EASP DR WGIGL A D A + R
Sbjct: 63 YRTAEHWMMAHKALLFGDEEAAGRIVAAKHPGEAKRLGRQVRGFDEETWRAHRFDIVVRGSVEKFRADPALRAYLVGTGSRVLVEASPRDRVWGIGLAADDERATDPAR 171
BLAST of mRNA_M-pyrifera_M_contig13333.5920.1 vs. uniprot
Match: UPI001F188234 (NADAR family protein n=1 Tax=Prevotella hominis TaxID=2518605 RepID=UPI001F188234) HSP 1 Score: 121 bits (303), Expect = 1.360e-32 Identity = 59/102 (57.84%), Postives = 69/102 (67.65%), Query Frame = 1
Query: 1 RYCNAEQWMMASKARLFNDGEAYGKIMRTQDPREHKALGRQVRGFDASTWDARGFDLVVKGNLAKFRQNPLFMQNLLATGSKILGEASPSDREWGIGLHASD 306
+Y EQ+MMASKARLF D E +IM P E+K LGR++RGF A TWDA +D+VVKGN AKF QNP + LLATG I+ EASP D WGIGL D
Sbjct: 52 QYHTTEQYMMASKARLFGDDEVLNEIMEAPTPFEYKNLGRKIRGFVAETWDANKYDIVVKGNKAKFSQNPALKEFLLATGDSIIAEASPYDTIWGIGLGRED 153
BLAST of mRNA_M-pyrifera_M_contig13333.5920.1 vs. uniprot
Match: A0A6B2TT47_9ACTN (NADAR family protein n=2 Tax=Streptomyces sp. SID13031 TaxID=2706046 RepID=A0A6B2TT47_9ACTN) HSP 1 Score: 121 bits (303), Expect = 1.610e-32 Identity = 58/105 (55.24%), Postives = 69/105 (65.71%), Query Frame = 1
Query: 1 RYCNAEQWMMASKARLFNDGEAYGKIMRTQDPREHKALGRQVRGFDASTWDARGFDLVVKGNLAKFRQNPLFMQNLLATGSKILGEASPSDREWGIGLHASDPDA 315
RY AE WMMA KARLF D E+ K++ P+ KA+GRQV GFD TW +LV++GNL KFRQN + LL TG ++L EASP DR WGIGL A DP A
Sbjct: 57 RYSTAEHWMMAGKARLFGDNESAAKVIAAGHPQRAKAIGRQVTGFDTETWQRHRAELVIEGNLHKFRQNKPLLDYLLNTGKRVLVEASPVDRIWGIGLAADDPRA 161
BLAST of mRNA_M-pyrifera_M_contig13333.5920.1 vs. uniprot
Match: A0A8J4EIH2_9ACTN (NADAR domain-containing protein n=2 Tax=Actinocatenispora comari TaxID=2807577 RepID=A0A8J4EIH2_9ACTN) HSP 1 Score: 121 bits (304), Expect = 1.750e-32 Identity = 59/109 (54.13%), Postives = 73/109 (66.97%), Query Frame = 1
Query: 4 YCNAEQWMMASKARLFNDGEAYGKIMRTQDPREHKALGRQVRGFDASTWDARGFDLVVKGNLAKFRQNPLFMQNLLATGSKILGEASPSDREWGIGLHASDPDALNQMR 330
Y +AE WMMA KARLF DG A +I+ + P E K LGR VR FD W++R F LVV GN+AKF Q+P + LL TGS++L EASP DR WGIG+ A+D A + R
Sbjct: 61 YASAEHWMMAGKARLFGDGVALERILAARTPAEAKKLGRSVRDFDQQVWESRRFGLVVDGNVAKFGQDPRLREFLLGTGSRVLVEASPYDRIWGIGVSAADERATDPAR 169
BLAST of mRNA_M-pyrifera_M_contig13333.5920.1 vs. uniprot
Match: A0A836CP42_9STRA (NADAR domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CP42_9STRA) HSP 1 Score: 120 bits (301), Expect = 2.020e-32 Identity = 56/109 (51.38%), Postives = 72/109 (66.06%), Query Frame = 1
Query: 4 YCNAEQWMMASKARLFNDGEAYGKIMRTQDPREHKALGRQVRGFDASTWDARGFDLVVKGNLAKFRQNPLFMQNLLATGSKILGEASPSDREWGIGLHASDPDALNQMR 330
Y AEQWMMA KARLFN + +I+ T DP +HK LGR V F++ W+ +V+ GN AKF QN + L+ TGS++L EASP DR WGIGL A+DP AL++ R
Sbjct: 26 YSCAEQWMMACKARLFNARDVLAQILATADPEQHKRLGRAVPNFNSELWERHSLQVVIHGNYAKFTQNAALRRELVDTGSRLLVEASPHDRVWGIGLAANDPKALDERR 134 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig13333.5920.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig13333.5920.1 >prot_M-pyrifera_M_contig13333.5920.1 ID=prot_M-pyrifera_M_contig13333.5920.1|Name=mRNA_M-pyrifera_M_contig13333.5920.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=102bp MMASKARLFNDGEAYGKIMRTQDPREHKALGRQVRGFDASTWDARGFDLVback to top mRNA from alignment at M-pyrifera_M_contig13333:255..2742+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig13333.5920.1 ID=mRNA_M-pyrifera_M_contig13333.5920.1|Name=mRNA_M-pyrifera_M_contig13333.5920.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=2488bp|location=Sequence derived from alignment at M-pyrifera_M_contig13333:255..2742+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig13333:255..2742+ >mRNA_M-pyrifera_M_contig13333.5920.1 ID=mRNA_M-pyrifera_M_contig13333.5920.1|Name=mRNA_M-pyrifera_M_contig13333.5920.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=612bp|location=Sequence derived from alignment at M-pyrifera_M_contig13333:255..2742+ (Macrocystis pyrifera P11B4 male)back to top |