mRNA_M-pyrifera_M_contig13262.5897.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig13262.5897.1
Unique NamemRNA_M-pyrifera_M_contig13262.5897.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig13262.5897.1 vs. uniprot
Match: D7FX88_ECTSI (PLCXc domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FX88_ECTSI)

HSP 1 Score: 320 bits (821), Expect = 1.060e-105
Identity = 159/263 (60.46%), Postives = 197/263 (74.90%), Query Frame = 1
Query:    1 MLPCWMSSLEGTLALNEISIPATHDTMAKGVSACFQEGTGNIVFTQAWSLRTMLDAGVRALDIRLRHENDV-FTLEHGLFPLPYEFNEDVRDVLETFLADNPTETVIILYQVNDLGPNTR----TAEETLEESMAVNADLWLSGSTVPTLDEARGKIVLANDMSLLEQNEFEVEGFGGISAKKALVRYFFSDGAPV---SDTLRVNYLSGTGTNVHPLTIAAGLRGIFEGTNEVVFEFSEGCLGVVMIDYIGEDAIAHIVAQQ 765
            M PCWMS L+G L LN+IS+P THDTM+KG+SAC QEG  N V TQAWSLRTMLD GVRA+D+R+R ++D+   LEHG+  LPY F+ DVRDVL +FL DNPTETV++ YQ+NDL         TAE+TL+ SM+   DLWL G+ VPTL+EARGK VL  DM   EQN+F +  F  ++ KK LVR FF +G  V       R+NYLSGTGT V+PLT+AAGL+ +++GTNEVVFEFS G LGVVM D++GEDA+AH+VAQQ
Sbjct:  109 MQPCWMSGLDGALRLNQISLPGTHDTMSKGISACLQEGQANYVHTQAWSLRTMLDTGVRAIDVRIRRKSDLSLVLEHGIVELPYGFDVDVRDVLASFLTDNPTETVVMFYQMNDLAGEDSSGGVTAEDTLQASMSQYPDLWLDGAVVPTLEEARGKAVLPTDMGQEEQNDFNLSSFEAVATKKGLVRDFFLEGGGVPADGGPFRLNYLSGTGTYVYPLTVAAGLKSVYQGTNEVVFEFSGGSLGVVMFDFVGEDAVAHVVAQQ 371          
BLAST of mRNA_M-pyrifera_M_contig13262.5897.1 vs. uniprot
Match: UPI0009E30A81 (phosphatidylinositol-specific phospholipase C n=1 Tax=Allosalinactinospora lopnorensis TaxID=1352348 RepID=UPI0009E30A81)

HSP 1 Score: 134 bits (338), Expect = 7.990e-33
Identity = 104/281 (37.01%), Postives = 139/281 (49.47%), Query Frame = 1
Query:    7 PCWMSSLEGTLALNEISIPATHDTMAKGVSACFQEGTGNIVFTQAWSLRTMLDAGVRALDIRLRHENDVFTLEHGLFPLPYEFNEDVRDVLETFLADNPTETVII-LYQVNDLGPNTRTAEETLEESMAVNAD--------LWLSGST---VPTLDEARGKIVLANDMS--------------LLEQNEFEVEGFGGISAKKALVR-YFFSDGAPVSDTLRVNYLSGTGTNVHPLTIAAG---LRGIFEGTNEVVFEFSEGCLGVVMIDYIGEDAIAHIVA 759
            P WMS +     L  +SIP THDTMA+GV+            TQ   L   L AG+RALDIR RH  DVF + HG   L   F + +RD  + FL ++PTETV++ L +      NTR+  ETLE  +  N D        LW  G     +PTL EARGKIVL  D +              +  Q+E+ V     I  K    R +F   G+  S+ L VN+LSG G   +P  +A G   LRG+ +   + +FE +    GVVM+DY G   +  +VA
Sbjct:   61 PDWMSLVPDDTDLAALSIPGTHDTMARGVTPAAN--------TQDSGLPEQLGAGIRALDIRARHHRDVFPIHHGRVYLNANFTDVLRDTTD-FLKEHPTETVLMRLKEEYRAEENTRSFAETLEWYLNDNPDTADLAREHLWSPGGDGRRIPTLGEARGKIVLLQDFNGDGAVYGPRWGGPAMDIQDEYRVPTIFDIDDKWHKARAHFEKTGSGDSEALSVNFLSGAGVGAYPKEVARGVLGLRGVNDFALQYLFERNVSRTGVVMMDYPGAGLVDAVVA 332          
BLAST of mRNA_M-pyrifera_M_contig13262.5897.1 vs. uniprot
Match: UPI001F2D45DE (phosphatidylinositol-specific phospholipase C domain-containing protein n=1 Tax=Myxococcus stipitatus TaxID=83455 RepID=UPI001F2D45DE)

HSP 1 Score: 130 bits (328), Expect = 3.170e-31
Identity = 101/275 (36.73%), Postives = 146/275 (53.09%), Query Frame = 1
Query:    7 PCWMSSLEGTLALNEISIPATHDTMAKGVSACFQEGTGNIVFTQAWSLRTMLDAGVRALDIRLRHENDVFTLEHGLFPLPYEFNEDVRDVLETFLADNPTETVIILYQVNDLGPN-TRTAEETLE---ESMAVNADLWLSGSTVPTLDEARGKIVLANDMS----------LLEQNEFEVEGFGGISAKKALVRYFFS---DGAPVSDTLRVNYLSGTGTNVHPLTIAAGLR--GI-FEGTNEVVFEFSEGC----LGVVMIDYIGEDAIAHIVA 759
            P WMS + G  +L  +S+P THDTMA      +Q   G++  TQ+  LR+ LDAG+RALDIR RH ++ FT+ HG+  L   F++ +R  ++ FL  NPTETV++  +      N TRT  +T E   +  A +  LW  GS VPTL E RGKIV+ +D +          +  Q+++ V     I  K   VR   +    GAP   TL VN+LSG+    +PL +A G+   G+   G N+   +   G      GV+M+D+ G   I  I+A
Sbjct:   32 PTWMSWVPGGTSLAALSLPGTHDTMA------YQSYGGDLTQTQSLDLRSQLDAGIRALDIRCRHIDNAFTIHHGVVYLHVNFDDVLRTTIQ-FLNANPTETVVMRVKKEHTEENVTRTFAQTFEAYRDQPAYSPYLW-RGSHVPTLGEVRGKIVILDDFAGGAYGIPWGAISLQDDWTVSQLADIDDKWFKVRDHLARTNTGAP--GTLFVNFLSGSSALAYPLHVAGGINILGVQTRGVNDYAIDHLVGGNVQRAGVMMMDFPGAGLIDAILA 296          
BLAST of mRNA_M-pyrifera_M_contig13262.5897.1 vs. uniprot
Match: UPI001CCE2E8E (phosphatidylinositol-specific phospholipase C n=1 Tax=Cystobacter gracilis TaxID=394092 RepID=UPI001CCE2E8E)

HSP 1 Score: 126 bits (316), Expect = 9.180e-30
Identity = 95/282 (33.69%), Postives = 148/282 (52.48%), Query Frame = 1
Query:   13 WMSSLEGTLALNEISIPATHDTMAKGVSACFQEGTGNIVFTQAWSLRTMLDAGVRALDIRLRHENDVFTLEHGLFPLPYEFNEDVRDVLETFLADNPTETVII-LYQVNDLGPNTRTAEETL---EESMAVNADLWLSGSTVPTLDEARGKIVLA----------------NDMSLLEQNEFEVEGFGGISAK-KALVRYFFSDGAPVSDTLRVNYLSGTGTN--VHPLTIAAGLRGIFEGTNEVVFEF----SEGCLGVVMIDYIGEDAIAHIVAQQVYMV 777
            WMS +     L  +SIP THDTM+      F  G+  +V TQ+  LRT LDAG+RALDIR RH  D F + HG       F++ +R  ++ FL D+P+ETV++ + +  D   NTR+ EET    +   A    +W +G+T+PTL++ RGKIV+                 ++ S   Q+E+EV     I  K + ++  F    +  +  + VN+LSG+ +   VHP T+A+G   ++ G N+   E+    +    G+VM+D+ G   I  I+A    +V
Sbjct:   60 WMSWIPNATNLAALSIPGTHDTMS------FHGGS--LVQTQSLPLRTQLDAGIRALDIRCRHIGDRFAIHHGSVYQHANFDDVLRTTIQ-FLKDHPSETVLMKVKEEYDAEGNTRSFEETFAWYQSQTAYKNFIW-TGTTLPTLEQVRGKIVIVQAFGGGSYGVRWPSDGSNASFDVQDEWEVTWLWDIPTKWERILAQFEKTKSGSASVMYVNFLSGSSSTGGVHPYTVASGEGSVYRGMNDQALEYLMAGNMQRTGMVMMDFPGAGLIDAIIAHNFRLV 331          
BLAST of mRNA_M-pyrifera_M_contig13262.5897.1 vs. uniprot
Match: UPI001F209607 (phosphatidylinositol-specific phospholipase C n=1 Tax=Marinitenerispora sediminis TaxID=1931232 RepID=UPI001F209607)

HSP 1 Score: 119 bits (298), Expect = 1.970e-28
Identity = 93/285 (32.63%), Postives = 134/285 (47.02%), Query Frame = 1
Query:    7 PCWMSSLEGTLALNEISIPATHDTMAKGVSACFQEGTGNIVFTQAWSLRTMLDAGVRALDIRLRHENDVFTLEHGLFPLPYEFNEDVRDVLETFLADNPTETVIILYQVNDLGP-NTRTAEETLEESMAVNAD--------LWLS-----GSTVPTLDEARGKIVLANDMS--------------LLEQNEFEVEGFGGISAKKALVR-YFFSDGAPVSDTLRVNYLSGTGTNVHPLTIAAGLRGIFEGTNEVVFEFSEGC----LGVVMIDYIGEDAIAHIVAQ 762
            P WM+ +    +L  +SIP THDTMA+ V+A  +        TQ   L   LDAGVRALDIR RH  D FT+ HG   L   F + +R   + FL ++PTETV++  +       NTRT EETL+  +  N D        +W        + +P L + RG+IV+  D                +  Q+++EV     I+ K    R +F +     +D L +N+LSG      P+ +A+G  G F G N+              GVVM DY G   +  I+A+
Sbjct:   30 PDWMAEISDGTSLAALSIPGTHDTMARDVTALAE--------TQESPLPEQLDAGVRALDIRTRHFQDRFTIHHGRVYLHANFTDVLRQTTD-FLREHPTETVLMRVKPEHTAEQNTRTYEETLDWYLTENPDTAGLAHDYVWTPPGGEYATRIPDLGQVRGRIVILQDFDGAGTVYGPRWAGAGMSIQDDYEVPTLFDIARKWEKARTHFETTRTGPADRLHINFLSGASLGALPIHVASGGLG-FRGVNDYALSHLRATDLPRTGVVMADYPGPGLVEEILAE 304          
BLAST of mRNA_M-pyrifera_M_contig13262.5897.1 vs. uniprot
Match: L7UB27_MYXSD (1-phosphatidylinositol phosphodiesterase n=4 Tax=Myxococcus TaxID=32 RepID=L7UB27_MYXSD)

HSP 1 Score: 120 bits (302), Expect = 1.340e-27
Identity = 96/276 (34.78%), Postives = 141/276 (51.09%), Query Frame = 1
Query:    7 PCWMSSLEGTLALNEISIPATHDTMAKGVSACFQEGTGNIVFTQAWSLRTMLDAGVRALDIRLRHENDVFTLEHGLFPLPYEFNEDVRDVLETFLADNPTETVIILYQVNDLGPN-TRTAEETLE---ESMAVNADLWLSGSTVPTLDEARGKIVLANDM----------SLLEQNEFEVEGFGGISAKKALVR-YFFSDGAPVSDTLRVNYLSGTGTNVHPLTIAAGLR--GI-FEGTNEVVFEFSEGC----LGVVMIDYIGEDAIAHIVAQQV 768
            P WM  +  + +L  +S+P THDTMA      +Q   G++  TQ+  LRT LDAG+RA+DIR RH  D FT+ HG+  L   F++ ++  ++ FL  NPTETV++  +      + TR+  +T E        N  LW  GS VPTL E RGKIV+ +D           +L  Q+++ V     I  K   VR +     +  S  L VN+LSG+    +P  +A G+   GI + G N+   +   G      GV+M+D+ G   I  I+A  V
Sbjct:   42 PSWMRWISSSTSLAALSLPGTHDTMA------YQSYGGDLTQTQSLDLRTQLDAGIRAVDIRCRHIGDRFTIHHGVVYLHVNFDDVLQTTIQ-FLQANPTETVVMRVKKEHTEEDVTRSFAQTFEWYRNRPEYNPYLW-RGSHVPTLGEVRGKIVVLDDFGGGTYGIPWGALDLQDDWTVSQLADIDDKWNKVRAHLDRTQSGSSSKLFVNFLSGSSAMAYPRHVAGGINILGIDYRGVNDYAVDHLVGGWAQRAGVMMMDFPGAGLIDAILALNV 309          
BLAST of mRNA_M-pyrifera_M_contig13262.5897.1 vs. uniprot
Match: A0A368T564_9ACTN (1-phosphatidylinositol phosphodiesterase n=2 Tax=Marinitenerispora sediminis TaxID=1931232 RepID=A0A368T564_9ACTN)

HSP 1 Score: 113 bits (283), Expect = 1.570e-26
Identity = 91/282 (32.27%), Postives = 132/282 (46.81%), Query Frame = 1
Query:   16 MSSLEGTLALNEISIPATHDTMAKGVSACFQEGTGNIVFTQAWSLRTMLDAGVRALDIRLRHENDVFTLEHGLFPLPYEFNEDVRDVLETFLADNPTETVIILYQVNDLGP-NTRTAEETLEESMAVNAD--------LWLS-----GSTVPTLDEARGKIVLANDMS--------------LLEQNEFEVEGFGGISAKKALVR-YFFSDGAPVSDTLRVNYLSGTGTNVHPLTIAAGLRGIFEGTNEVVFEFSEGC----LGVVMIDYIGEDAIAHIVAQ 762
            M+ +    +L  +SIP THDTMA+ V+A  +        TQ   L   LDAGVRALDIR RH  D FT+ HG   L   F + +R   + FL ++PTETV++  +       NTRT EETL+  +  N D        +W        + +P L + RG+IV+  D                +  Q+++EV     I+ K    R +F +     +D L +N+LSG      P+ +A+G  G F G N+              GVVM DY G   +  I+A+
Sbjct:    1 MAEISDGTSLAALSIPGTHDTMARDVTALAE--------TQESPLPEQLDAGVRALDIRTRHFQDRFTIHHGRVYLHANFTDVLRQTTD-FLREHPTETVLMRVKPEHTAEQNTRTYEETLDWYLTENPDTAGLAHDYVWTPPGGEYATRIPDLGQVRGRIVILQDFDGAGTVYGPRWAGAGMSIQDDYEVPTLFDIARKWEKARTHFETTRTGPADRLHINFLSGASLGALPIHVASGGLG-FRGVNDYALSHLRATDLPRTGVVMADYPGPGLVEEILAE 272          
BLAST of mRNA_M-pyrifera_M_contig13262.5897.1 vs. uniprot
Match: UPI001586B1A7 (phosphatidylinositol-specific phospholipase C n=1 Tax=Streptomyces sp. TRM64462 TaxID=2741726 RepID=UPI001586B1A7)

HSP 1 Score: 113 bits (283), Expect = 4.790e-26
Identity = 92/277 (33.21%), Postives = 131/277 (47.29%), Query Frame = 1
Query:    7 PCWMSSLEGTLALNEISIPATHDTMAKGVSACFQEGTGNIVFTQAWSLRTMLDAGVRALDIRLRHENDVFTLEHGLFPLPYEFNEDVRDVLETFLADNPTETVII-LYQVNDLGPNTRTAEETLEESMAVNAD--------LWLSG---STVPTLDEARGKIVLANDM--------------SLLEQNEFEVEGFGGISAKKALVRYFFSDGAPVSD-TLRVNYLSGTGTNVHPLTIAAGLRGIFEGTNEVVFEFSEGC----LGVVMIDYIGEDAI 744
            P WM++L  + +L ++SIP THDTMA+ V+         +  TQ  SL   L+AGVRALDIR RH +D FT+ HG+  L   F + +R   + FL  +P ETV++ L + +    NTR+  +TL   +  N +        LW         P L E RG+IVL  +               +L  Q+ ++V     I  K    R    + A  +  TL + +LSG G   +P  +AAG    F G N       EG      GVVM+DY G D +
Sbjct:   54 PDWMAALPDSASLADLSIPGTHDTMARDVTF--------VAETQKSSLPEQLNAGVRALDIRARHFHDRFTIHHGVVYLNANFTDVLRQTTD-FLKAHPRETVLMRLQEEHTAEGNTRSFAQTLRWYLEQNPETAGLARDHLWRPAHGDQQAPALGEVRGRIVLLQEFDGEGTSYGLSYWSPALNVQDAYDVPTLFHIKGKWETARGHIEEAAAHNPRTLYITFLSGVGAGAYPHAVAAGALW-FTGVNHYALHHLEGRDLRRAGVVMMDYPGPDLV 320          
BLAST of mRNA_M-pyrifera_M_contig13262.5897.1 vs. uniprot
Match: L8PQS9_STRVR (1-phosphatidylinositol phosphodiesterase n=2 Tax=Streptomyces viridochromogenes TaxID=1938 RepID=L8PQS9_STRVR)

HSP 1 Score: 112 bits (280), Expect = 9.420e-26
Identity = 95/277 (34.30%), Postives = 128/277 (46.21%), Query Frame = 1
Query:    7 PCWMSSLEGTLALNEISIPATHDTMAKGVSACFQEGTGNIVFTQAWSLRTMLDAGVRALDIRLRHENDVFTLEHGLFPLPYEFNEDVRDVLETFLADNPTETVII-LYQVNDLGPNTRTAEETLEESMAVNAD--------LW--LSGS-TVPTLDEARGKIVLANDM--------------SLLEQNEFEVEGFGGISAKKALVRYFFSDGAPVSD-TLRVNYLSGTGTNVHPLTIAAGLRGIFEGTNEVVFEFSEGC----LGVVMIDYIGEDAI 744
            P WM+SL     L  +SIP THDTMA+ V+         +  TQ   L   L+AGVRALDIR RH +D FT+ HG   L   F + +R   + FL  +P E V++ L + +    NTRT  +TL   +  N D        LW  L G+ + PTL E RGKIVL  +               ++  Q+ ++V     I  K    R    D A      L + +LSG G   +P  +AAG    F G N       +G      GVVM+DY G D +
Sbjct:   36 PDWMASLPDAAPLAALSIPGTHDTMARNVTF--------VAETQKSPLPEQLNAGVRALDIRARHFHDHFTIHHGAVYLNANFTDVLRQTTD-FLKAHPGEAVLMRLNEEHTAAYNTRTFAQTLRWYLEQNPDTAGLARDHLWRPLHGAQSAPTLGEVRGKIVLLQEFDGEGTDFGLSYWSPAMNIQDAYDVPSLFHIKGKWETARGHLEDAATRDPGKLYITFLSGVGPGAYPHAVAAGALW-FTGVNHYALHHFQGRDVWRTGVVMMDYPGPDLV 302          
BLAST of mRNA_M-pyrifera_M_contig13262.5897.1 vs. uniprot
Match: A0A243NCX7_BACTV (1-phosphatidylinositol phosphodiesterase n=4 Tax=Bacillus cereus group TaxID=86661 RepID=A0A243NCX7_BACTV)

HSP 1 Score: 112 bits (280), Expect = 1.800e-25
Identity = 82/237 (34.60%), Postives = 120/237 (50.63%), Query Frame = 1
Query:    7 PCWMSSLEGTLALNEISIPATHDTMAKGVSACFQEGTGNIVFTQAWSLRTMLDAGVRALDIRLRHENDVFTLEHGLFPLPYEFNEDVRDVLETFLADNPTETVI--ILYQVNDLGPNTRTAEETLEESMAVN-ADLWLSGSTVPTLDEARGKIVLANDMS--------------LLEQNEFEV-EGFGGISAKKALVRYFFSDGAPVSDTLRVNYLSGTGTNV---HPLTIAAGLRG 654
            P WMS +  ++ ++E+SIP TH TMA+ V A  +E   N+V  Q+  L   LD G+R +DIR RH N+ F + HG       F +DV   +  FL  NP+ET++  +  + N  G NTRT  ET E     N A  W   S  PTL + RGKI+L  + +              L  Q+++ V  G  GI  K   V+  F       +++ +N+LSG+G  +   +P  IA+G  G
Sbjct:   38 PKWMSLINNSIRISELSIPGTHGTMARFVDAFPEE---NLVLNQSLPLADQLDTGIRYIDIRCRHYNNEFAIHHGFVWQRTYFGDDVLKPVINFLLKNPSETILMRVKEEYNPSG-NTRTFGETFEAYWNPNQAFFWNPTSQNPTLQDVRGKIILLQEFTGPNNKMFGINYNWDLRIQDQWNVVAGPQGIYNKWTAVKNHFYSAMNNKNSIHLNHLSGSGGQLGGPYPWFIASGYTG 270          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig13262.5897.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FX88_ECTSI1.060e-10560.46PLCXc domain-containing protein n=2 Tax=Ectocarpus... [more]
UPI0009E30A817.990e-3337.01phosphatidylinositol-specific phospholipase C n=1 ... [more]
UPI001F2D45DE3.170e-3136.73phosphatidylinositol-specific phospholipase C doma... [more]
UPI001CCE2E8E9.180e-3033.69phosphatidylinositol-specific phospholipase C n=1 ... [more]
UPI001F2096071.970e-2832.63phosphatidylinositol-specific phospholipase C n=1 ... [more]
L7UB27_MYXSD1.340e-2734.781-phosphatidylinositol phosphodiesterase n=4 Tax=M... [more]
A0A368T564_9ACTN1.570e-2632.271-phosphatidylinositol phosphodiesterase n=2 Tax=M... [more]
UPI001586B1A74.790e-2633.21phosphatidylinositol-specific phospholipase C n=1 ... [more]
L8PQS9_STRVR9.420e-2634.301-phosphatidylinositol phosphodiesterase n=2 Tax=S... [more]
A0A243NCX7_BACTV1.800e-2534.601-phosphatidylinositol phosphodiesterase n=4 Tax=B... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig13262contigM-pyrifera_M_contig13262:1586..3044 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score122.9
Seed ortholog evalue2.3e-25
Seed eggNOG ortholog215803.DB30_1575
KEGG rclassRC00017,RC00425
KEGG koko:K01771
KEGG ReactionR03332
KEGG Pathwayko00562,map00562
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Phospholipase C, catalytic domain (part); domain X
EggNOG OGs1N0QX@1224,2X4XX@28221,2YZTE@29,439M2@68525,COG0823@1,COG0823@2
Ec32 ortholog descriptionPLC-like phosphodiesterase, TIM beta/alpha-barrel domain
Ec32 orthologEc-26_003950.1
EC4.6.1.13
COG Functional cat.U
Best tax levelMyxococcales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Exons2
Model size777
Cds size777
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815812.4080925-CDS-M-pyrifera_M_contig13262:1585..22241622815812.4080925-CDS-M-pyrifera_M_contig13262:1585..2224Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig13262 1586..2224 -
1692277582.678004-CDS-M-pyrifera_M_contig13262:1585..22241692277582.678004-CDS-M-pyrifera_M_contig13262:1585..2224Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig13262 1586..2224 -
1622815812.4191418-CDS-M-pyrifera_M_contig13262:2906..30441622815812.4191418-CDS-M-pyrifera_M_contig13262:2906..3044Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig13262 2907..3044 -
1692277582.6909995-CDS-M-pyrifera_M_contig13262:2906..30441692277582.6909995-CDS-M-pyrifera_M_contig13262:2906..3044Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig13262 2907..3044 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig13262.5897.1prot_M-pyrifera_M_contig13262.5897.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig13262 1586..3044 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig13262.5897.1

>prot_M-pyrifera_M_contig13262.5897.1 ID=prot_M-pyrifera_M_contig13262.5897.1|Name=mRNA_M-pyrifera_M_contig13262.5897.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=259bp
MLPCWMSSLEGTLALNEISIPATHDTMAKGVSACFQEGTGNIVFTQAWSL
RTMLDAGVRALDIRLRHENDVFTLEHGLFPLPYEFNEDVRDVLETFLADN
PTETVIILYQVNDLGPNTRTAEETLEESMAVNADLWLSGSTVPTLDEARG
KIVLANDMSLLEQNEFEVEGFGGISAKKALVRYFFSDGAPVSDTLRVNYL
SGTGTNVHPLTIAAGLRGIFEGTNEVVFEFSEGCLGVVMIDYIGEDAIAH
IVAQQVYMV
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mRNA from alignment at M-pyrifera_M_contig13262:1586..3044-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig13262.5897.1 ID=mRNA_M-pyrifera_M_contig13262.5897.1|Name=mRNA_M-pyrifera_M_contig13262.5897.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=1459bp|location=Sequence derived from alignment at M-pyrifera_M_contig13262:1586..3044- (Macrocystis pyrifera P11B4 male)
ATGCTGCCGTGCTGGATGTCGTCTCTGGAGGGAACCCTGGCGCTGAACGA GATCAGCATCCCGGCGACGCATGACACCATGGCCAAGGGCGTGTCGGCTT GCTTCCAGGAGGGAACGGGGAACATCGTGTTCACTCAGGTGTGCTGGATT TGCCTCCGCTTGCGACAAAGAAACCGTTTTCGCCAAGTTTTTTTCCTGAA ATGCTTGTAATTTTTTTTTTTAAAAGAGGGAAACTTTTGATGGGTGGAAT TTTTGTCTTGTTCTGTGACCTAAAATATAAAACGGTTAACGTCATCATCC ACCAAGTTAGAACACCTTTTTTTTTTTAACCTATTACGGAGGACCATAGT AAATAGGACCTACGGAACACACGAAATCCTTTCTATTTAGCTATTTTTAC TGACAACATTTGGTCCTATTTACTATGGTCTCCCGTAATAGTGACCAGGA GTGACGACGGCGATTTTCCTACCTATCAGGAAATTCCTTCCGGAAAATTG ATCAATAGGAAAAAGGCGGACCGGAAATGCCTTTTCTCTCTCCGTACTTC GGATGAAGCATTGGTTTGGGTTATGGCCGTACTGCTGTTTGTCCAAACTG TGCACTGAAGCACGAAGTATGATGAGGTAGTAGCCGCTGAAACTGCAGTG TACCCATGGTGTCCGTCCAAACTGCTGTATTCTCACCGCTGTTATTTTAT AACCTCAACCTTGCCCCTCGTCCCTTGCGTCGTTGTCGGCGTCGTCGTCG CCCCCCCCCCCCCTTCCCCCTCCCCCTCCCCCTTCCCCTCCCCGCCCCCC CGCCCCGCCCCGCCCTCCAGGCGTGGTCGCTCCGGACAATGCTCGACGCG GGGGTGCGCGCGCTCGACATCCGGCTCCGTCACGAGAACGACGTCTTCAC CCTCGAGCACGGCCTCTTCCCTCTCCCCTACGAATTCAACGAGGACGTCC GGGACGTCCTGGAGACGTTCCTGGCCGACAACCCCACCGAGACCGTCATC ATACTCTACCAGGTCAACGACCTGGGGCCCAACACCAGGACGGCGGAGGA GACCCTCGAGGAATCGATGGCGGTGAACGCGGACCTCTGGCTGTCGGGGT CCACCGTGCCGACCCTGGACGAGGCTCGGGGGAAGATCGTTCTGGCCAAC GACATGTCGCTCCTGGAGCAGAACGAGTTCGAGGTGGAGGGCTTCGGGGG GATTTCGGCGAAGAAGGCTTTGGTCCGATATTTTTTCTCGGACGGCGCCC CCGTGAGCGACACGCTCCGCGTGAACTACCTATCCGGAACGGGGACCAAC GTACACCCCCTGACGATCGCCGCCGGGCTGAGGGGCATCTTCGAGGGGAC GAACGAGGTCGTGTTCGAGTTCTCGGAGGGCTGCCTCGGCGTGGTGATGA TCGATTACATCGGGGAGGATGCCATCGCCCACATCGTCGCGCAGCAGGTA TATATGGTG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig13262:1586..3044-

>mRNA_M-pyrifera_M_contig13262.5897.1 ID=mRNA_M-pyrifera_M_contig13262.5897.1|Name=mRNA_M-pyrifera_M_contig13262.5897.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1554bp|location=Sequence derived from alignment at M-pyrifera_M_contig13262:1586..3044- (Macrocystis pyrifera P11B4 male)
ATGCTGCCGTGCTGGATGTCGTCTCTGGAGGGAACCCTGGCGCTGAACGA
GATCAGCATCCCGGCGACGCATGACACCATGGCCAAGGGCGTGTCGGCTT
GCTTCCAGGAGGGAACGGGGAACATCGTGTTCACTCAGATGCTGCCGTGC
TGGATGTCGTCTCTGGAGGGAACCCTGGCGCTGAACGAGATCAGCATCCC
GGCGACGCATGACACCATGGCCAAGGGCGTGTCGGCTTGCTTCCAGGAGG
GAACGGGGAACATCGTGTTCACTCAGGCGTGGTCGCTCCGGACAATGCTC
GACGCGGGGGTGCGCGCGCTCGACATCCGGCTCCGTCACGAGAACGACGT
CTTCACCCTCGAGCACGGCCTCTTCCCTCTCCCCTACGAATTCAACGAGG
ACGTCCGGGACGTCCTGGAGACGTTCCTGGCCGACAACCCCACCGAGACC
GTCATCATACTCTACCAGGTCAACGACCTGGGGCCCAACACCAGGACGGC
GGAGGAGACCCTCGAGGAATCGATGGCGGTGAACGCGGACCTCTGGCTGT
CGGGGTCCACCGTGCCGACCCTGGACGAGGCTCGGGGGAAGATCGTTCTG
GCCAACGACATGTCGCTCCTGGAGCAGAACGAGTTCGAGGTGGAGGGCTT
CGGGGGGATTTCGGCGAAGAAGGCTTTGGTCCGATATTTTTTCTCGGACG
GCGCCCCCGTGAGCGACACGCTCCGCGTGAACTACCTATCCGGAACGGGG
ACCAACGTACACCCCCTGACGATCGCCGCCGGGCTGAGGGGCATCTTCGA
GGGGACGAACGAGGTCGTGTTCGAGTTCTCGGAGGGCTGCCTCGGCGTGG
TGATGATCGATTACATCGGGGAGGATGCCATCGCCCACATCGTCGCGCAG
CAGGTATATATGGTGGCGTGGTCGCTCCGGACAATGCTCGACGCGGGGGT
GCGCGCGCTCGACATCCGGCTCCGTCACGAGAACGACGTCTTCACCCTCG
AGCACGGCCTCTTCCCTCTCCCCTACGAATTCAACGAGGACGTCCGGGAC
GTCCTGGAGACGTTCCTGGCCGACAACCCCACCGAGACCGTCATCATACT
CTACCAGGTCAACGACCTGGGGCCCAACACCAGGACGGCGGAGGAGACCC
TCGAGGAATCGATGGCGGTGAACGCGGACCTCTGGCTGTCGGGGTCCACC
GTGCCGACCCTGGACGAGGCTCGGGGGAAGATCGTTCTGGCCAACGACAT
GTCGCTCCTGGAGCAGAACGAGTTCGAGGTGGAGGGCTTCGGGGGGATTT
CGGCGAAGAAGGCTTTGGTCCGATATTTTTTCTCGGACGGCGCCCCCGTG
AGCGACACGCTCCGCGTGAACTACCTATCCGGAACGGGGACCAACGTACA
CCCCCTGACGATCGCCGCCGGGCTGAGGGGCATCTTCGAGGGGACGAACG
AGGTCGTGTTCGAGTTCTCGGAGGGCTGCCTCGGCGTGGTGATGATCGAT
TACATCGGGGAGGATGCCATCGCCCACATCGTCGCGCAGCAGGTATATAT
GGTG
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