mRNA_M-pyrifera_M_contig13261.5896.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig13261.5896.1 vs. uniprot
Match: D7FXY4_ECTSI (Repressor of RNA polymerase III transcription n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FXY4_ECTSI) HSP 1 Score: 227 bits (579), Expect = 2.780e-72 Identity = 115/150 (76.67%), Postives = 116/150 (77.33%), Query Frame = 1
Query: 1 LADVGVRRTLVDLICTMNASFPDYDFSGVRPDHFDKEISVSLVRNKVCVRVGGVRLARASTVLCLYCVFLLSAKKVNAALAEISVIHNKIFLESFWADLDEVMQLKDCEVYSYSPDMEGDPFTEGCLWSFNHFFLNKTLKRVLFLHCTTK 450
L DVGVRRTLVDLICTMNASFPDYDFSGVRPD FDKE SVSLVRNKV NAALAE+SVIHNKIFLESFWADLDEVM LKDCEVYSYSPDMEGDPFTEGCLWSFNHFFLNK LKRVLFLHCTTK
Sbjct: 110 LTDVGVRRTLVDLICTMNASFPDYDFSGVRPDSFDKEASVSLVRNKV-----------------------------NAALAEVSVIHNKIFLESFWADLDEVMTLKDCEVYSYSPDMEGDPFTEGCLWSFNHFFLNKNLKRVLFLHCTTK 230
BLAST of mRNA_M-pyrifera_M_contig13261.5896.1 vs. uniprot
Match: A0A7S2B0Q0_9STRA (Repressor of RNA polymerase III transcription n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2B0Q0_9STRA) HSP 1 Score: 140 bits (352), Expect = 1.380e-38 Identity = 71/147 (48.30%), Postives = 89/147 (60.54%), Query Frame = 1
Query: 1 LADVGVRRTLVDLICTMNASFPDYDFSGVRPDHFDKEISVSLVRNKVCVRVGGVRLARASTVLCLYCVFLLSAKKVNAALAEISVIHNKIFLESFWADLDEVMQLKDCEVYSYSPDMEGDPFTEGCLWSFNHFFLNKTLKRVLFLHC 441
L+D G RR L+DLI TMNASFPD+DFS VRP+ F KE VSLV + + N LAE+S +N FLE W ++EV++LK+CE+YSY PDME DPF+EG LW+FN FF NK LKR+L+ C
Sbjct: 71 LSDSGTRRLLIDLISTMNASFPDHDFSSVRPEQFLKEQHVSLVMSNI-----------------------------NMHLAELSETYNSSFLEELWMSIEEVVKLKECEIYSYVPDMEEDPFSEGNLWTFNFFFFNKNLKRILYFTC 188
BLAST of mRNA_M-pyrifera_M_contig13261.5896.1 vs. uniprot
Match: A0A1V9Z7M1_9STRA (Repressor of RNA polymerase III transcription n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Z7M1_9STRA) HSP 1 Score: 124 bits (311), Expect = 1.210e-32 Identity = 62/152 (40.79%), Postives = 87/152 (57.24%), Query Frame = 1
Query: 1 LADVGVRRTLVDLICTMNASFPDYDFSGVRPDHFDKEISVSLVRNKVCVRVGGVRLARASTVLCLYCVFLLSAKKVNAALAEISVIHNKIFLESFWADLDEVMQLKDCEVYSYSPDMEG--DPFTEGCLWSFNHFFLNKTLKRVLFLHCTTK 450
LAD R+ L++LI TMNASFPDYDFS ++P+ F KEI + +V N + N LAEI + + FLE W + +Q +DCE+Y+Y PDM+G DPF+EG LWSFN+FF NK +K++L+ C ++
Sbjct: 65 LADANTRKLLINLISTMNASFPDYDFSDLKPEQFKKEIDLRIVVNSI-----------------------------NTQLAEIVEMDDLSFLEKLWESIFAAIQPRDCEIYTYIPDMDGCSDPFSEGTLWSFNYFFYNKNMKKILYFTCMSR 187
BLAST of mRNA_M-pyrifera_M_contig13261.5896.1 vs. uniprot
Match: A0A1V9Z321_9STRA (Repressor of RNA polymerase III transcription n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z321_9STRA) HSP 1 Score: 124 bits (310), Expect = 1.760e-32 Identity = 65/152 (42.76%), Postives = 87/152 (57.24%), Query Frame = 1
Query: 1 LADVGVRRTLVDLICTMNASFPDYDFSGVRPDHFDKEISVSLVRNKVCVRVGGVRLARASTVLCLYCVFLLSAKKVNAALAEISVIHNKIFLESFWADLDEVMQLKDCEVYSYSPDMEG--DPFTEGCLWSFNHFFLNKTLKRVLFLHCTTK 450
LAD R+ L++LI TMNASFPDYDFS ++P+ F KE+ + LV N V NA LAEI + + FLE W + + KDCE+YSY PDM+G DPF++G LWSFN+FF NK LK++L+ C ++
Sbjct: 66 LADSNTRKLLINLISTMNASFPDYDFSDLKPEQFHKEVDLRLVVNGV-----------------------------NAQLAEIVEMDDMGFLEKLWESVFAAIAPKDCEIYSYIPDMDGCSDPFSDGTLWSFNYFFYNKALKKILYFTCMSR 188
BLAST of mRNA_M-pyrifera_M_contig13261.5896.1 vs. uniprot
Match: A0A485LDY7_9STRA (Repressor of RNA polymerase III transcription n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LDY7_9STRA) HSP 1 Score: 122 bits (307), Expect = 1.580e-31 Identity = 64/152 (42.11%), Postives = 85/152 (55.92%), Query Frame = 1
Query: 1 LADVGVRRTLVDLICTMNASFPDYDFSGVRPDHFDKEISVSLVRNKVCVRVGGVRLARASTVLCLYCVFLLSAKKVNAALAEISVIHNKIFLESFWADLDEVMQLKDCEVYSYSPDMEG--DPFTEGCLWSFNHFFLNKTLKRVLFLHCTTK 450
LAD R+ L++LI TMNASFPDYDFS ++P+ F KE+ + V N + N LAEI + N FLE W + +Q DCEVYSY PDM+G DPF++G LWSFN+FF NK LK++L+ C ++
Sbjct: 102 LADSNTRKLLINLISTMNASFPDYDFSDLKPEQFHKEVEMRSVVNSI-----------------------------NTQLAEIVEMDNMGFLEKLWESIVAAIQPADCEVYSYIPDMDGCSDPFSDGTLWSFNYFFYNKDLKKILYFTCMSR 224
BLAST of mRNA_M-pyrifera_M_contig13261.5896.1 vs. uniprot
Match: A0A8J2SMK1_9STRA (Repressor of RNA polymerase III transcription n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SMK1_9STRA) HSP 1 Score: 121 bits (304), Expect = 1.840e-31 Identity = 65/150 (43.33%), Postives = 85/150 (56.67%), Query Frame = 1
Query: 1 LADVGVRRTLVDLICTMNASFPDYDFSGVRPDHFDKEISVSLVRNKVCVRVGGVRLARASTVLCLYCVFLLSAKKVNAALAEISVIHNKIFLESFWADLDEVMQLKDCEVYSYSPDMEGDPFTEGCLWSFNHFFLNKTLKRVLFLHCTTK 450
LA RR LVDLI T+NASFPD+DFS +RP+ F +E VR LA +T A++ A FL+ WA ++E +QL++CEVYSY PD E DPF+EG LWSFN+FF NK LKR+++L C +
Sbjct: 72 LAQPATRRLLVDLIATLNASFPDHDFSNLRPEQFCREAGAQFA-----VRACARHLAELAT-----------AERFRAP-------GGGEFLDELWAAIEEAIQLRECEVYSYVPDGESDPFSEGALWSFNYFFFNKRLKRIVYLSCVAR 198
BLAST of mRNA_M-pyrifera_M_contig13261.5896.1 vs. uniprot
Match: A0A6G0XTH3_9STRA (Repressor of RNA polymerase III transcription n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XTH3_9STRA) HSP 1 Score: 121 bits (304), Expect = 2.650e-31 Identity = 62/152 (40.79%), Postives = 86/152 (56.58%), Query Frame = 1
Query: 1 LADVGVRRTLVDLICTMNASFPDYDFSGVRPDHFDKEISVSLVRNKVCVRVGGVRLARASTVLCLYCVFLLSAKKVNAALAEISVIHNKIFLESFWADLDEVMQLKDCEVYSYSPDMEG--DPFTEGCLWSFNHFFLNKTLKRVLFLHCTTK 450
LAD R+ L++LI TMNASFPDYDFS ++P+ F KE + ++ N + N LAEI + N FLE W + E +Q +CEVYSY PDM+G DPF++G LWSFN+FF NK +K++L+ C ++
Sbjct: 80 LADSNTRKLLINLISTMNASFPDYDFSDLKPERFHKEPDMRMIVNAI-----------------------------NTQLAEIVEMDNMGFLEKLWESIVEAIQPSECEVYSYIPDMDGCSDPFSDGTLWSFNYFFYNKEMKKILYFTCMSR 202
BLAST of mRNA_M-pyrifera_M_contig13261.5896.1 vs. uniprot
Match: M4BLB2_HYAAE (Repressor of RNA polymerase III transcription n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BLB2_HYAAE) HSP 1 Score: 120 bits (302), Expect = 3.940e-31 Identity = 64/150 (42.67%), Postives = 83/150 (55.33%), Query Frame = 1
Query: 1 LADVGVRRTLVDLICTMNASFPDYDFSGVRPDHFDKEISVSLVRNKVCVRVGGVRLARASTVLCLYCVFLLSAKKVNAALAEISVIHNKIFLESFWADLDEVMQLKDCEVYSYSPDMEGDPFTEGCLWSFNHFFLNKTLKRVLFLHCTTK 450
LA R+ L+ LI TMNASFPDYDFS VRPD F K I F S +++N LAE+ + F+E W + EV++L +C+VYSY PDM+ DPF++G LWSFN+FF NKT K+VL+ C K
Sbjct: 77 LAAAATRKLLITLISTMNASFPDYDFSAVRPDQFCKVID-----------------------------FRSSLQRINHDLAELLDAESNGFVEKMWESVAEVIKLDECDVYSYIPDMDSDPFSDGHLWSFNYFFYNKTQKKVLYFTCICK 197
BLAST of mRNA_M-pyrifera_M_contig13261.5896.1 vs. uniprot
Match: A0A7R9U9D7_9STRA (Repressor of RNA polymerase III transcription n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U9D7_9STRA) HSP 1 Score: 120 bits (302), Expect = 4.450e-31 Identity = 60/150 (40.00%), Postives = 86/150 (57.33%), Query Frame = 1
Query: 1 LADVGVRRTLVDLICTMNASFPDYDFSGVRPDHFDKEISVSLVRNKVCVRVGGVRLARASTVLCLYCVFLLSAKKVNAALAEISVIHNKIFLESFWADLDEVMQLKDCEVYSYSPDMEGDPFTEGCLWSFNHFFLNKTLKRVLFLHCTTK 450
L++ R L+DLI TMNASFPDYDFS +RP+ F KE +S V N + + V R + ++ K FL W ++++++L++CEVY Y PD++GDPF+EG LWSFN+FF NK LKR++F C +
Sbjct: 71 LSESSTRNLLIDLIITMNASFPDYDFSSLRPEQFLKESHLSFVVNDINTHLAHVDEFR---------------------IEGLTSGTEKKFLVDVWRTVEDIIRLRECEVYRYIPDLDGDPFSEGTLWSFNYFFFNKALKRIIFFTCIAR 199
BLAST of mRNA_M-pyrifera_M_contig13261.5896.1 vs. uniprot
Match: A0A067C5G7_SAPPC (Repressor of RNA polymerase III transcription n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067C5G7_SAPPC) HSP 1 Score: 120 bits (300), Expect = 6.290e-31 Identity = 62/152 (40.79%), Postives = 87/152 (57.24%), Query Frame = 1
Query: 1 LADVGVRRTLVDLICTMNASFPDYDFSGVRPDHFDKEISVSLVRNKVCVRVGGVRLARASTVLCLYCVFLLSAKKVNAALAEISVIHNKIFLESFWADLDEVMQLKDCEVYSYSPDMEG--DPFTEGCLWSFNHFFLNKTLKRVLFLHCTTK 450
LAD R+ L++LI TMNASFPDYDFS ++P+ F KE+ + LV N V NA LAEI + + FLE W + + ++CE+YSY PDM+G DPF++G LWSFN+FF +KT K++L+ C ++
Sbjct: 66 LADANTRKLLINLISTMNASFPDYDFSDLKPEQFQKEVDLRLVVNGV-----------------------------NAQLAEIVEMDDMGFLEKLWESIFGAISPRECEIYSYIPDMDGCSDPFSDGTLWSFNYFFYHKTHKKILYFTCMSR 188 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig13261.5896.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig13261.5896.1 >prot_M-pyrifera_M_contig13261.5896.1 ID=prot_M-pyrifera_M_contig13261.5896.1|Name=mRNA_M-pyrifera_M_contig13261.5896.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=152bp LADVGVRRTLVDLICTMNASFPDYDFSGVRPDHFDKEISVSLVRNKVCVRback to top mRNA from alignment at M-pyrifera_M_contig13261:6881..7912+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig13261.5896.1 ID=mRNA_M-pyrifera_M_contig13261.5896.1|Name=mRNA_M-pyrifera_M_contig13261.5896.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=1032bp|location=Sequence derived from alignment at M-pyrifera_M_contig13261:6881..7912+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig13261:6881..7912+ >mRNA_M-pyrifera_M_contig13261.5896.1 ID=mRNA_M-pyrifera_M_contig13261.5896.1|Name=mRNA_M-pyrifera_M_contig13261.5896.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=912bp|location=Sequence derived from alignment at M-pyrifera_M_contig13261:6881..7912+ (Macrocystis pyrifera P11B4 male)back to top |