mRNA_M-pyrifera_M_contig13248.5892.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig13248.5892.1 vs. uniprot
Match: D7G6Y6_ECTSI (SpoU_methylase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6Y6_ECTSI) HSP 1 Score: 222 bits (565), Expect = 5.270e-68 Identity = 108/133 (81.20%), Postives = 120/133 (90.23%), Query Frame = 1
Query: 1 QVVASDLSPSAVPIGKIDWSVKTAVVLGNEERGISDSMRNMADATFVIPMRGFVRSFNMSVACSIIVAHLSAIRALKHGDLPEDERRKVTATWLMQCVRGSEAILRREGIVMPDEVFGSAEDGPQTVVGFHVR 399
QVVASDLSPSAVPI +IDWSV TAVVLGNEERGISDSMR+MADATFVIPMRGFVRSFNMSVACSII+AHLSA+RALKHGDLPEDERR+V TWLMQCVRGSE IL+REGI +P E+FG+ + PQ + G+ VR
Sbjct: 231 QVVASDLSPSAVPISEIDWSVPTAVVLGNEERGISDSMRDMADATFVIPMRGFVRSFNMSVACSIILAHLSAVRALKHGDLPEDERREVAVTWLMQCVRGSEHILKREGIDIPQEIFGTDKQRPQNIAGYRVR 363
BLAST of mRNA_M-pyrifera_M_contig13248.5892.1 vs. uniprot
Match: A0A0G4EX06_VITBC (SpoU_methylase domain-containing protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4EX06_VITBC) HSP 1 Score: 117 bits (293), Expect = 6.600e-28 Identity = 56/116 (48.28%), Postives = 77/116 (66.38%), Query Frame = 1
Query: 1 QVVASDLSPSAVPIGKIDWSVKTAVVLGNEERGISDSMRNMADATFVIPMRGFVRSFNMSVACSIIVAHLSAIRALKHGDLPEDERRKVTATWLMQCVRGSEAILRREGIVMPDEV 348
+V ASDL + + +D S +VLGNE GIS+ MR +AD TF +PMRGF SFN+SVAC++ A+LS + LK GDL E ER V WLM+CV GS+ +L R+G+ +P+ +
Sbjct: 196 RVYASDLQEDSTALTSLDVSQPFTIVLGNERTGISEEMRGLADETFFVPMRGFAESFNLSVACAVTCAYLSQMGGLKWGDLSEGERAAVMTEWLMRCVPGSQQVLERKGLRVPERL 311
BLAST of mRNA_M-pyrifera_M_contig13248.5892.1 vs. uniprot
Match: A0A4D9CY40_9STRA (SpoU_methylase domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CY40_9STRA) HSP 1 Score: 111 bits (277), Expect = 3.140e-26 Identity = 55/117 (47.01%), Postives = 81/117 (69.23%), Query Frame = 1
Query: 4 VVASDLSP--SAVPIGKIDWSV-KTAVVLGNEERGISDSMRNMADATFVIPMRGFVRSFNMSVACSIIVAHLSAIRALKHGDLPEDERRKVTATWLMQCVRGSEAILRREGIVMPDE 345
V+ASDL P S P+ ++ W+ K A+V+GNEERGI++ MR++ D TF IPM GF SFN+S + ++ +A +S++ LKHGDLP E+ + WL++ V AILRREG+++ DE
Sbjct: 122 VLASDLKPGTSPKPVQEVKWAAQKVAIVMGNEERGITEEMRSLCDGTFQIPMMGFAESFNLSGSTAVTLAFVSSMGGLKHGDLPTAEKNLLLLRWLLRSVPQGPAILRREGLLIEDE 238
BLAST of mRNA_M-pyrifera_M_contig13248.5892.1 vs. uniprot
Match: W7UA00_9STRA (Trna rrna methyltransferase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7UA00_9STRA) HSP 1 Score: 113 bits (283), Expect = 5.050e-26 Identity = 56/119 (47.06%), Postives = 83/119 (69.75%), Query Frame = 1
Query: 4 VVASDLSP--SAVPIGKIDWSV-KTAVVLGNEERGISDSMRNMADATFVIPMRGFVRSFNMSVACSIIVAHLSAIRALKHGDLPEDERRKVTATWLMQCVRGSEAILRREGIVMPDEVF 351
V+ASDL P S P+ +++W+ K A+V+GNEERGI++ MR++ D TF IPM GF SFN+S + ++ +A +S++ LKHGDLP E+ + WL++ V AILRREG+++ DE F
Sbjct: 263 VLASDLKPGTSPKPVQEVNWAAQKVAIVMGNEERGITEEMRSLCDGTFQIPMMGFAESFNLSGSTAVTLAFVSSMGGLKHGDLPTAEKNLLLLRWLLRSVPQGPAILRREGLLIEDERF 381
BLAST of mRNA_M-pyrifera_M_contig13248.5892.1 vs. uniprot
Match: A0A7S2KIJ5_9STRA (Hypothetical protein n=2 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KIJ5_9STRA) HSP 1 Score: 95.5 bits (236), Expect = 1.210e-20 Identity = 55/126 (43.65%), Postives = 75/126 (59.52%), Query Frame = 1
Query: 1 QVVASDLSPSAVPIGKIDWSVKTAVVLGNEERGISDSMRNMADATFVIPMRGFVRSFNMSVACSIIVAHLSAIRALKH------GDLPEDERRKVTATWLMQCVRGSE---AILRREGIVMPDEVF 351
++ ASDL+PS+ + ++DW VV+GNE+RGIS MR +AD TF +PM GF SFN+SVA +I AH+SA K GDL E E + W M + + A+LR+ GI +P EVF
Sbjct: 82 RIFASDLNPSSKDVRELDWDWPICVVMGNEDRGISQEMRELADETFTLPMCGFAESFNLSVATAITCAHMSASSREKDKGPIQPGDLDEHEVNCLRLKWYMNSLPQKKMGGALLRKAGIKLP-EVF 206
BLAST of mRNA_M-pyrifera_M_contig13248.5892.1 vs. uniprot
Match: A0A7S2A9L6_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A9L6_TRICV) HSP 1 Score: 96.7 bits (239), Expect = 9.200e-20 Identity = 57/126 (45.24%), Postives = 80/126 (63.49%), Query Frame = 1
Query: 1 QVVASDLSPSAVPIGKIDWSV-KTAVVLGNEERGISDSMRNMADATFVIPMRGFVRSFNMSVACSIIVAHLSAIR-----ALKHGDLPEDERRKVTATWLMQCV---RGSEAILRREGIVMPDEVF 351
++ ASDL+P++ + ++DW V VV+GNEERGISD MR MAD TF +PM GF SFN+SVA SI +AH+SA AL+ GDL E + L+ + + +L++EGIV+P E+F
Sbjct: 282 KIYASDLNPNSQDVREVDWDVGPVCVVMGNEERGISDEMREMADVTFTLPMVGFAESFNLSVATSITLAHMSAKSKDGRGALRPGDLDPHELACLRLKGLLGSLPKRKLGPILLKQEGIVLP-EIF 406
BLAST of mRNA_M-pyrifera_M_contig13248.5892.1 vs. uniprot
Match: A0A7S4VNE4_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4VNE4_9STRA) HSP 1 Score: 95.1 bits (235), Expect = 2.490e-19 Identity = 53/134 (39.55%), Postives = 81/134 (60.45%), Query Frame = 1
Query: 1 QVVASDLSPSAVPIGKIDWSV-KTAVVLGNEERGISDSMRNMADATFVIPMRGFVRSFNMSVACSIIVAHLSAIRA--------------LKHGDLPEDERRKVTATWLMQCV---RGSEAILRREGIVMPDEV 348
++ ASDL+P++ + +DW V VV+GNE+RGIS+ MRN+AD TF +PM GF SFN+SVA ++ +AH+SA L+ GDL E E + L+ + R A+L+++GIV+PD++
Sbjct: 241 KIYASDLNPNSKDVRDLDWDVGPICVVMGNEDRGISEEMRNLADETFTLPMVGFAESFNLSVATAVTLAHMSASSRQKEVEGGETIVTGPLRPGDLDEHEFNCLRLKGLLNSLPQRRTGPALLKQKGIVLPDDI 374
BLAST of mRNA_M-pyrifera_M_contig13248.5892.1 vs. uniprot
Match: A0A1V0DJA8_9BACT (tRNA (guanosine(18)-2'-O)-methyltransferase n=1 Tax=Rhodothermaceae bacterium RA TaxID=1779382 RepID=A0A1V0DJA8_9BACT) HSP 1 Score: 89.0 bits (219), Expect = 6.870e-18 Identity = 47/109 (43.12%), Postives = 73/109 (66.97%), Query Frame = 1
Query: 4 VVASDLSPSAVPIGKIDWSVKTAVVLGNEERGISDSMRNMADATFVIPMRGFVRSFNMSVACSIIVAHLSAIRALK---HGDLPEDERRKVTATWLMQCVRGSEAILRR 321
+VA+ L +AVPI +D++ TA+VLGNE G+S++M +AD VIPM GFV+SFN+SVA ++ + H R + HGDL E++R ++ A + ++ VR + IL+R
Sbjct: 126 IVATHLDEAAVPIDAVDFTQPTALVLGNERDGVSEAMLALADRRVVIPMTGFVQSFNISVAAALGLYHAYRDRLARQGYHGDLTEEQRLRLRAAYCLRSVRRAPEILQR 234
BLAST of mRNA_M-pyrifera_M_contig13248.5892.1 vs. uniprot
Match: A0A8J2SJW7_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SJW7_9STRA) HSP 1 Score: 90.1 bits (222), Expect = 9.000e-18 Identity = 51/117 (43.59%), Postives = 68/117 (58.12%), Query Frame = 1
Query: 4 VVASDLSPSAVPIGKIDW-SVKTAVVLGNEERGISDSMRNMADATFVIPMRGFVRSFNMSVACSIIVAHLSAIRALKHGDLPEDERRKVTATWLMQCVRGSEAILRREGIVMPDEVF 351
V A+DLSP AV ++DW S K A+V GNEE GISD +R +AD +PMRG S N+SV+ +AH+ A AL DL +ER + W + VR +LRREG+ + V
Sbjct: 195 VAATDLSPGAVDFSEVDWASGKHALVFGNEEVGISDELRELADVRVRLPMRGLAESLNLSVSVGAALAHVDAKGALV-PDLTVEERDLLLLRWSLLSVRAGRELLRREGVELDQGVL 310
BLAST of mRNA_M-pyrifera_M_contig13248.5892.1 vs. uniprot
Match: A0A4Q6BN48_9PROT (tRNA (guanosine(18)-2'-O)-methyltransferase n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A4Q6BN48_9PROT) HSP 1 Score: 88.6 bits (218), Expect = 9.760e-18 Identity = 44/108 (40.74%), Postives = 73/108 (67.59%), Query Frame = 1
Query: 1 QVVASDLSPSAVPIGKIDWSVKTAVVLGNEERGISDSMRNMADATFVIPMRGFVRSFNMSVACSIIVAHLSAIRALK---HGDLPEDERRKVTATWLMQCVRGSEAIL 315
QV+A+ L +A PIG++D ++ TA+V GNE+ GIS M ++ D T +IPM+GFV+SFN+SVA +I + H++ R LK GDL ++E+ + A + ++ + E ++
Sbjct: 124 QVLATHLDANAKPIGEVDVTIPTAIVFGNEKDGISQEMIDLCDQTVIIPMQGFVQSFNISVAAAISLYHITRERQLKLGVQGDLSDEEKNVLAAEFSLRSSKNPERLI 231 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig13248.5892.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig13248.5892.1 >prot_M-pyrifera_M_contig13248.5892.1 ID=prot_M-pyrifera_M_contig13248.5892.1|Name=mRNA_M-pyrifera_M_contig13248.5892.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=97bp MRNMADATFVIPMRGFVRSFNMSVACSIIVAHLSAIRALKHGDLPEDERRback to top mRNA from alignment at M-pyrifera_M_contig13248:5332..6953- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig13248.5892.1 ID=mRNA_M-pyrifera_M_contig13248.5892.1|Name=mRNA_M-pyrifera_M_contig13248.5892.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=1622bp|location=Sequence derived from alignment at M-pyrifera_M_contig13248:5332..6953- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig13248:5332..6953- >mRNA_M-pyrifera_M_contig13248.5892.1 ID=mRNA_M-pyrifera_M_contig13248.5892.1|Name=mRNA_M-pyrifera_M_contig13248.5892.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=582bp|location=Sequence derived from alignment at M-pyrifera_M_contig13248:5332..6953- (Macrocystis pyrifera P11B4 male)back to top |