mRNA_M-pyrifera_M_contig13237.5889.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig13237.5889.1
Unique NamemRNA_M-pyrifera_M_contig13237.5889.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
[Close]
BLAST of mRNA_M-pyrifera_M_contig13237.5889.1 vs. uniprot
Match: D7FU99_ECTSI (Similar to DNA primase large subunit, partial n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FU99_ECTSI)

HSP 1 Score: 409 bits (1050), Expect = 1.320e-135
Identity = 275/505 (54.46%), Postives = 329/505 (65.15%), Query Frame = 1 
Query:    1 METRVPPGLYLEPPSFDIDLDDFALLPRRRIEAIRLLREGQAT--EISNGSCEQQALTA-GKLLLLHGHGDRPSEAQHHRADLVSHFVLRLACCGGSEGRGGRGGEEAGGWKGRGQGXGG-EHHDRRWERREWFVRAETDLFEARLHWHLR---GGADRAGRNGQETGAKPEME---PASLNDRLQALRVVYKLGWLQPVADGLDDASA-----EPTSLRERADRGSTDXXXXXXXXXXXXXXXXXXXXXXXXXXXXADRGIERSKVKRP----RWN-SFPSPQEAVP----RSRLKKTGAYDGRAGIPPPPPPWVSGHPTPQASYGSSIGYVSCPFEKVLPMVRSRRVLLRDGKALLAPGQVPAAVVQHFKELLRKGMAIAERGLPGVERDERVKGVLAQVRRDIDRTLRGRHQEAGD-DPRASIAITRETIDQVAEKHFPLCMRRTLHVLRRDHHLKYEARVQLVSFLGNAGMEVHELLGLWREEFPRGMPPEEYARKRNQLS 1440
            MET  PPGLY++PP FDI+L++F  LP RR+EA+RLLREGQ T  ++   S  Q+ALTA  +LLLLHGHGDRPSEA++ RADL SHF+L+LACCG + G G + G EA     R    G  E  DRR  RREWFVRAE DLFEARLHWHL+   GG  + G  G+  G     +    AS+ DRL+ALR+ Y L WLQPV     D S      E       A  G           XXXXXXXXXXXXXXXXXX   D   E S+   P    R + S  + +  +P    R +L ++ A+ G                      GS IGY+SCPFEKVLP+VRSRRVLLRDGKALL+P Q+P AVVQHF+  LR+G+AIAERGLPGVE D RV  VL QVR  +D  + G  +   D D R+   ITR+ IDQ+AEKHFPLCMRRTL +LRR+HHLKY+AR+QL+SFL NAGMEV E+LGLWREEFP+GMP +EYARKRNQLS
Sbjct:    1 METCKPPGLYVDPPDFDIELEEFGTLPMRRLEAVRLLREGQTTPAQVPEASPAQKALTADARLLLLHGHGDRPSEAKNQRADLASHFILKLACCG-ATGGGVQPGTEA---SKRDDSSGRCEEVDRRSSRREWFVRAERDLFEARLHWHLQQNEGGGSKEGIAGRCNGGASSADLGARASIADRLEALRIFYNLEWLQPVGPAAPDCSRMEKQRESGHEGSHAREGVCTSSYGGKGCXXXXXXXXXXXXXXXXXXDGDDPFREHSRSYSPGACSRGDASHVTLERQLPPSSERKKLPESVAFKG----------------------GSDIGYLSCPFEKVLPLVRSRRVLLRDGKALLSPDQLPEAVVQHFEGRLREGLAIAERGLPGVEADVRVAEVLRQVRSAVDSLVSGGGRRGLDADNRSMAIITRKNIDQLAEKHFPLCMRRTLRILRREHHLKYQARLQLISFLRNAGMEVDEILGLWREEFPKGMPADEYARKRNQLS 479
[Close]
BLAST of mRNA_M-pyrifera_M_contig13237.5889.1 vs. uniprot
Match: A0A662YH99_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662YH99_9STRA)

HSP 1 Score: 101 bits (251), Expect = 1.120e-19
Identity = 63/184 (34.24%), Postives = 95/184 (51.63%), Query Frame = 1 
Query:  895 QASYGSSIGYVSCPFEKVLPMVRSRRVLLRDGKALLAPGQVPAAVVQHFKELLRKGMAIAERGLPGVERDERVKGVLAQVRRDIDRTLRGRHQEAGDD-------PRASIAITRETIDQVAEKHFPLCMRRTLHVLRRDHHLKYEARVQLVSFLGNAGMEVHELLGLWREEFPRGMPPEEYARK 1425
            Q  +G S      PF +V  +VR RRV++R G  L+   ++  A + HFK  L++ +   +  +P +  +      L ++   +D  L   H   G         PR  +A     IDQVAEKHFPLCM++  H LR +HHLKY+ RVQ   FL   G  V+E L  +R EF + +PP ++ ++
Sbjct:   82 QEGHGRSRILYRVPFHEVSALVRQRRVVVRKGCCLIPSHEMDYAALHHFKRSLKQQLGDLQCAIPALGPE------LDRLTPVLDGFLAKAHSLVGSSGSRSRTRPRLEVA----GIDQVAEKHFPLCMKQLHHKLRENHHLKYDGRVQYRLFLKGVGFSVYETLQFFRTEFTKKIPPAKFEKE 255
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BLAST of mRNA_M-pyrifera_M_contig13237.5889.1 vs. uniprot
Match: A0A8K1FD44_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FD44_PYTOL)

HSP 1 Score: 100 bits (249), Expect = 3.120e-19
Identity = 60/169 (35.50%), Postives = 86/169 (50.89%), Query Frame = 1 
Query:  922 YVSCPFEKVLPMVRSRRVLLRDGKALLAPGQVPAAVVQHFKELLRKGMAIAERGLPGVERD-ERVKGVLAQVRRDIDRTLRGRHQEAGDDPRASIAITRETIDQVAEKHFPLCMRRTLHVLRRDHHLKYEARVQLVSFLGNAGMEVHELLGLWREEFPRGMPPEEYARK 1425
            Y   PF +   +V  R VLL +G A +    +    V HFK++LR  +    R LP  + D ER+   L ++  +       R       P+  + +T E IDQVAEKHFPLCM+      R +HHLKY+ RVQ   FL   G  VHE +  +R+EF + +P   + R+
Sbjct:  146 YFRVPFHEAARLVARRHVLLVNGFAWINENALKEIAVHHFKQILRAQLTALRRSLPAKKADMERLSPTLDKLLAESQSLHPARSILQ---PKNQLRVTPENIDQVAEKHFPLCMKHLHRKFRANHHLKYDGRVQYRMFLKGLGFSVHESMMFFRDEFTKVLPQVRFDRE 311
[Close]
BLAST of mRNA_M-pyrifera_M_contig13237.5889.1 vs. uniprot
Match: E6RC40_CRYGW (DNA primase large subunit n=11 Tax=Cryptococcus TaxID=5206 RepID=E6RC40_CRYGW)

HSP 1 Score: 93.2 bits (230), Expect = 1.280e-16
Identity = 49/164 (29.88%), Postives = 86/164 (52.44%), Query Frame = 1 
Query:  934 PFEKVLPMVRSRRVLLRDGKALLAPGQVPAAVVQHFKELLRKGMAIAERGLPGVERDERVKGVLAQVRRDIDRTLRGRHQEAGDDPRASIAITRETIDQVAEKHFPLCMRRTLHVLRRDHHLKYEARVQLVSFLGNAGMEVHELLGLWREEFPRGMPPEEYARK 1425
            P+  V  +V +RRVL++DG A +      + V+Q F + L K +    + LP ++ DER+  V+  +       +     +  ++    + +T +TID VA KHFP CMR     L++DHHLK+  R+QL  FL   G+ + + +  WR  +   M  +++ ++
Sbjct:  201 PWYTVPDLVGARRVLVKDGLAFVPQSLQLSLVLQAFADRLEKALEFTAKNLPRLDEDERLGPVIDHLASSFLSGIGASDYQPSNELGDGMTVTADTIDDVARKHFPPCMRHLYEKLKKDHHLKHWGRLQLTLFLKGLGLPLDQAILFWRRSYGASMTDDKFNKE 364
[Close]
BLAST of mRNA_M-pyrifera_M_contig13237.5889.1 vs. uniprot
Match: A0A087SZT7_STEMI (DNA primase large subunit (Fragment) n=2 Tax=Stegodyphus TaxID=175340 RepID=A0A087SZT7_STEMI)

HSP 1 Score: 92.4 bits (228), Expect = 2.060e-16
Identity = 56/173 (32.37%), Postives = 93/173 (53.76%), Query Frame = 1 
Query:  913 SIGYVSCPFEKVLPMVRSRRVLLRDGKALLAPGQVPAAVVQHFKELLRKGMAIAERGLPGVERDERVKGVLAQV-RRDIDRTLRGRHQE-AGDDPRASIAITRETIDQVAEKHFPLCMRRTLHVLRRDHHLKYEARVQLVSFLGNAGMEVHELLGLWREEFPRGMPPEEYARK 1425
            SI +   PF +VL ++++R+V L+ G A +    +   +   ++  L   +AI  R LP +E D R+  +L+ + +R I      R  + AGD       IT E ID +++  FPLCM+     LRR+HHLKY  R+Q   FL   G+ + + L  WR+EF + M  +++ ++
Sbjct:  186 SIDFYKVPFVEVLDLIKNRKVFLKKGFAYIPEDDMVITIASAYRAHLSHSLAITSRALPQLEEDTRLISMLSTLHQRYIGTDYSNRKVDYAGD-------ITPEFIDGLSKTSFPLCMQNLHETLRRNHHLKYNGRLQYGLFLKGIGLTLEDALRFWRQEFTKIMDNDKFDKQ 351
[Close]
BLAST of mRNA_M-pyrifera_M_contig13237.5889.1 vs. uniprot
Match: A0A8H7GDN7_9AGAM (DNA primase large subunit n=1 Tax=Athelia sp. TMB TaxID=2748771 RepID=A0A8H7GDN7_9AGAM)

HSP 1 Score: 90.9 bits (224), Expect = 7.790e-16
Identity = 54/170 (31.76%), Postives = 89/170 (52.35%), Query Frame = 1 
Query:  922 YVSCPFEKVLPMVRSRRVLLRDGKALLAPGQVPAAVVQHFKELLRKGMAIAERGLPGVERDERVKGVLAQVRRDIDRTLRGRHQEAGDDPRASIA--ITRETIDQVAEKHFPLCMRRTLHVLRRDHHLKYEARVQLVSFLGNAGMEVHELLGLWREEFPRGMPPEEYARK 1425
            +V   F +VL +V  RRV LR G A +   +  + V   F++ L K + +  + LP ++ D R+  +L+ + +     L G   E      A+ A  IT + ID++A+KHFPLCMR     LR   HLK+  R+Q   FL   G+ + E +  WR+ F R +  +++ ++
Sbjct:  199 FVKVKFTRVLDLVEKRRVFLRGGWAYVPERERSSIVFNEFEKYLMKALELTSKALPRLDEDSRLVPILSNLSQGF---LAGAPSEWAGASNATDAEGITADMIDELAQKHFPLCMRNLHRELRATDHLKHFGRLQYGLFLKVLGLPIEEAIAFWRKSFMRRITEDKFNKE 365
[Close]
BLAST of mRNA_M-pyrifera_M_contig13237.5889.1 vs. uniprot
Match: A0A0C2XPM7_9AGAM (DNA primase large subunit n=1 Tax=Serendipita vermifera MAFF 305830 TaxID=933852 RepID=A0A0C2XPM7_9AGAM)

HSP 1 Score: 90.5 bits (223), Expect = 9.400e-16
Identity = 53/168 (31.55%), Postives = 87/168 (51.79%), Query Frame = 1 
Query:  922 YVSCPFEKVLPMVRSRRVLLRDGKALLAPGQVPAAVVQHFKELLRKGMAIAERGLPGVERDERVKGVLAQVRRDIDRTLRGRHQEAGDDPRASIAITRETIDQVAEKHFPLCMRRTLHVLRRDHHLKYEARVQLVSFLGNAGMEVHELLGLWREEFPRGMPPEEYARK 1425
            Y   P+ +V  +V  RR +LR G A +A  +  + V Q F+  L K + +  R LP ++ D R+  +L  + +     +   +  A   P    +IT + ID +A KHFPLCMR     LR D HLK++ R+Q   FL   G+ + E L  W++ F + +  E++ ++
Sbjct:  192 YYKVPWTRVPDLVEKRRAVLRAGTAYVAGREQFSIVFQQFQADLEKALEMTARALPRLDED-RLTPILDHLAQGFTLGISSEYSSA---PENGESITADMIDDLARKHFPLCMRMLHSNLREDSHLKHQGRLQYGLFLKIIGLSIEEALAFWKQAFSKKINDEKFRKE 355
[Close]
BLAST of mRNA_M-pyrifera_M_contig13237.5889.1 vs. uniprot
Match: A0A8H7FL11_9AGAM (Uncharacterized protein n=1 Tax=Athelia sp. TMB TaxID=2748771 RepID=A0A8H7FL11_9AGAM)

HSP 1 Score: 90.9 bits (224), Expect = 1.130e-15
Identity = 54/170 (31.76%), Postives = 89/170 (52.35%), Query Frame = 1 
Query:  922 YVSCPFEKVLPMVRSRRVLLRDGKALLAPGQVPAAVVQHFKELLRKGMAIAERGLPGVERDERVKGVLAQVRRDIDRTLRGRHQEAGDDPRASIA--ITRETIDQVAEKHFPLCMRRTLHVLRRDHHLKYEARVQLVSFLGNAGMEVHELLGLWREEFPRGMPPEEYARK 1425
            +V   F +VL +V  RRV LR G A +   +  + V   F++ L K + +  + LP ++ D R+  +L+ + +     L G   E      A+ A  IT + ID++A+KHFPLCMR     LR   HLK+  R+Q   FL   G+ + E +  WR+ F R +  +++ ++
Sbjct:  158 FVKVKFTRVLDLVEKRRVFLRGGWAYVPERERSSIVFNEFEKYLMKALELTSKALPRLDEDSRLVPILSNLSQGF---LAGAPSEWAGASNATDAEGITADMIDELAQKHFPLCMRNLHRELRATDHLKHFGRLQYGLFLKVLGLPIEEAIAFWRKSFMRRITEDKFNKE 324
[Close]
BLAST of mRNA_M-pyrifera_M_contig13237.5889.1 vs. uniprot
Match: A0A1Q3FVI3_CULTA (DNA primase large subunit n=9 Tax=Culex TaxID=53527 RepID=A0A1Q3FVI3_CULTA)

HSP 1 Score: 90.1 bits (222), Expect = 1.580e-15
Identity = 54/162 (33.33%), Postives = 84/162 (51.85%), Query Frame = 1 
Query:  913 SIGYVSCPFEKVLPMVRSRRVLLRDGKALLAPGQVPAAVVQHFKELLRKGMAIAERGLPGVERDERVKGVLAQVRRDIDRTLRGRHQEAGDDPRASIAITRETIDQVAEKHFPLCMRRTLHVLRRDHHLKYEARVQLVSFLGNAGMEVHELLGLWREEFPRG 1398
            ++ +   PF  VL +VR +R  L++G A ++ G   + +    +ELL +G+    R LP +E DER     A + + +  +  G+      +    I    E++DQ+A+K FPLCMR     LR  HH K+  R+Q   FL   G+ + + L  WREEF RG
Sbjct:  191 TMDFYKVPFTDVLDLVRGQRCYLKEGYAYVSAGDFVSVIGNKHQELLEEGLQAHLRLLPELENDER----FASLLKGLHTSYTGKDYTIAKNGEVPI----ESLDQLAKKSFPLCMRMCHDTLRSTHHHKHGGRMQYGLFLKGIGVTLEDSLRFWREEFTRG 344
[Close]
BLAST of mRNA_M-pyrifera_M_contig13237.5889.1 vs. uniprot
Match: A0A2L2YIM2_PARTP (DNA primase large subunit n=2 Tax=Parasteatoda tepidariorum TaxID=114398 RepID=A0A2L2YIM2_PARTP)

HSP 1 Score: 89.7 bits (221), Expect = 1.830e-15
Identity = 56/173 (32.37%), Postives = 91/173 (52.60%), Query Frame = 1 
Query:  922 YVSCPFEKVLPMVRSRRVLLRDGKALLAPGQVPAAVVQHFKELLRKGMAIAERGLPGVERDERVKGVLAQVRRDIDRTLRGRHQEAGDD---PRASIA--ITRETIDQVAEKHFPLCMRRTLHVLRRDHHLKYEARVQLVSFLGNAGMEVHELLGLWREEFPRGMPPEEYARK 1425
            +   PF +VL ++++R+V L  G A +    +   VV  ++  L   +A+  R LP +E D R+  +L+        TL  R+   G D    +AS    IT + ID +++  FPLCMR     LR++HHLKY  R+Q   FL   G+ + + L  WREEF + M  +++ ++
Sbjct:  191 FYKVPFTEVLDLIKNRKVYLERGLAYIPEEDLVVTVVSAYRAHLSHALAVTSRALPQLEEDTRLISMLS--------TLHQRY--IGTDYSNKKASFTGEITPDQIDNLSKVAFPLCMRNLHETLRKNHHLKYNGRLQYGLFLKGIGLSLDDALRFWREEFTKVMDSDKFDKQ 353
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig13237.5889.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FU99_ECTSI1.320e-13554.46Similar to DNA primase large subunit, partial n=2 ... [more]
A0A662YH99_9STRA1.120e-1934.24Uncharacterized protein n=1 Tax=Nothophytophthora ... [more]
A0A8K1FD44_PYTOL3.120e-1935.50Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
E6RC40_CRYGW1.280e-1629.88DNA primase large subunit n=11 Tax=Cryptococcus Ta... [more]
A0A087SZT7_STEMI2.060e-1632.37DNA primase large subunit (Fragment) n=2 Tax=Stego... [more]
A0A8H7GDN7_9AGAM7.790e-1631.76DNA primase large subunit n=1 Tax=Athelia sp. TMB ... [more]
A0A0C2XPM7_9AGAM9.400e-1631.55DNA primase large subunit n=1 Tax=Serendipita verm... [more]
A0A8H7FL11_9AGAM1.130e-1531.76Uncharacterized protein n=1 Tax=Athelia sp. TMB Ta... [more]
A0A1Q3FVI3_CULTA1.580e-1533.33DNA primase large subunit n=9 Tax=Culex TaxID=5352... [more]
A0A2L2YIM2_PARTP1.830e-1532.37DNA primase large subunit n=2 Tax=Parasteatoda tep... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig13237contigM-pyrifera_M_contig13237:2745..8345 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score416.4
Seed ortholog evalue1.8e-113
Seed eggNOG ortholog2880.D7FU99
KEGG rclassRC02795
KEGG koko:K02685
KEGG ReactionR00375,R00376,R00377,R00378
KEGG Pathwayko00230,ko00240,ko01100,ko03030,map00230,map00240,map01100,map03030
KEGG ModuleM00261
Hectar predicted targeting categoryother localisation
EggNOG free text desc.DNA primase activity
EggNOG OGsCOG2219@1,KOG2267@2759
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko03032
Exons6
Model size1446
Cds size1446
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig13237.5889.1prot_M-pyrifera_M_contig13237.5889.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig13237 2745..8345 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815811.6899705-CDS-M-pyrifera_M_contig13237:2744..28371622815811.6899705-CDS-M-pyrifera_M_contig13237:2744..2837Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig13237 2745..2837 -
1692277582.2376995-CDS-M-pyrifera_M_contig13237:2744..28371692277582.2376995-CDS-M-pyrifera_M_contig13237:2744..2837Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig13237 2745..2837 -
1622815811.7003899-CDS-M-pyrifera_M_contig13237:3745..39671622815811.7003899-CDS-M-pyrifera_M_contig13237:3745..3967Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig13237 3746..3967 -
1692277582.2510436-CDS-M-pyrifera_M_contig13237:3745..39671692277582.2510436-CDS-M-pyrifera_M_contig13237:3745..3967Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig13237 3746..3967 -
1622815811.7108524-CDS-M-pyrifera_M_contig13237:5969..66261622815811.7108524-CDS-M-pyrifera_M_contig13237:5969..6626Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig13237 5970..6626 -
1692277582.2667716-CDS-M-pyrifera_M_contig13237:5969..66261692277582.2667716-CDS-M-pyrifera_M_contig13237:5969..6626Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig13237 5970..6626 -
1622815811.7218318-CDS-M-pyrifera_M_contig13237:6969..71691622815811.7218318-CDS-M-pyrifera_M_contig13237:6969..7169Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig13237 6970..7169 -
1692277582.2761483-CDS-M-pyrifera_M_contig13237:6969..71691692277582.2761483-CDS-M-pyrifera_M_contig13237:6969..7169Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig13237 6970..7169 -
1622815811.7314224-CDS-M-pyrifera_M_contig13237:7202..73001622815811.7314224-CDS-M-pyrifera_M_contig13237:7202..7300Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig13237 7203..7300 -
1692277582.2836003-CDS-M-pyrifera_M_contig13237:7202..73001692277582.2836003-CDS-M-pyrifera_M_contig13237:7202..7300Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig13237 7203..7300 -
1622815811.740786-CDS-M-pyrifera_M_contig13237:8169..83451622815811.740786-CDS-M-pyrifera_M_contig13237:8169..8345Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig13237 8170..8345 -
1692277582.2912304-CDS-M-pyrifera_M_contig13237:8169..83451692277582.2912304-CDS-M-pyrifera_M_contig13237:8169..8345Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig13237 8170..8345 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig13237.5889.1

>prot_M-pyrifera_M_contig13237.5889.1 ID=prot_M-pyrifera_M_contig13237.5889.1|Name=mRNA_M-pyrifera_M_contig13237.5889.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=482bp
METRVPPGLYLEPPSFDIDLDDFALLPRRRIEAIRLLREGQATEISNGSC
EQQALTAGKLLLLHGHGDRPSEAQHHRADLVSHFVLRLACCGGSEGRGGR
GGEEAGGWKGRGQGGGGEHHDRRWERREWFVRAETDLFEARLHWHLRGGA
DRAGRNGQETGAKPEMEPASLNDRLQALRVVYKLGWLQPVADGLDDASAE
PTSLRERADRGSTDRESAGRGRADRENAGRESAKHEIADRGSADRGIERS
KVKRPRWNSFPSPQEAVPRSRLKKTGAYDGRAGIPPPPPPWVSGHPTPQA
SYGSSIGYVSCPFEKVLPMVRSRRVLLRDGKALLAPGQVPAAVVQHFKEL
LRKGMAIAERGLPGVERDERVKGVLAQVRRDIDRTLRGRHQEAGDDPRAS
IAITRETIDQVAEKHFPLCMRRTLHVLRRDHHLKYEARVQLVSFLGNAGM
EVHELLGLWREEFPRGMPPEEYARKRNQLSNS
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mRNA from alignment at M-pyrifera_M_contig13237:2745..8345-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig13237.5889.1 ID=mRNA_M-pyrifera_M_contig13237.5889.1|Name=mRNA_M-pyrifera_M_contig13237.5889.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=5601bp|location=Sequence derived from alignment at M-pyrifera_M_contig13237:2745..8345- (Macrocystis pyrifera P11B4 male)
ATGGAGACGCGTGTGCCACCCGGGTTGTACCTGGAACCTCCATCATTCGA
TATCGATCTCGACGACTTCGCGTTACTGCCGCGCCGCAGGATTGAGGCCA
TCCGTCTCCTCCGTGAGGGCCAAGCCACCGAGATTTCGAATGGGAGCTGT
GAACAGCAAGCGCTTACAGCAGGCAAGTAAACGAAGACGCGCACCGCGGA
TCCGCTGTGCTCGTTGCTGGGTCCGCTCAGTACCATCCCGATGCTCCCAC
TGCGGCAGCAGAAGAAGCCTGTCGACTAGCAGGACGGCAGGATCTGATTG
TATACGCAGCAACGTGCACATCATAGGCCAGCACCCCCGCACCCAGCTGC
ACCCAACTGACTTGCTGGGCGTCTGTGCAATATCTTGGGTCGGGGGTGGA
GAGTCTTTCCCCGTCGCCGCATGGGGGCGCCTGTCTGCGTTTTCGCGCCA
ATCGTTCGGTAGTTTAGACGCGCGCGCAACCGCGACCCGAGCATTGCTTT
CAGCCCACGAAGCCGAGCATCGGCCGGTTTGGCTGAACTTCTTTTACCTC
GGACAGCTGGTGATGTGATTTATCAGGAACGTACGTGCACTATTGAACAT
TTACATGGTAAAATAGGAGTTGAGAGGGTTGAACCAATTGGACAATAAAA
GGTGACGATCCGAACACCAAAGCTTCTGGCGGTACGTAGTCGGGGATGAT
ACAAAATGGCTAAGCGTCCGAGGTTTCAACGCAAGGAGGCGTACAGCCGG
GGCGCAAACATAATCCTACGTACCTTTACCGCTGGGCACTCAACAATGCT
TCGTAGACCGTTAGATAACGCCCAAAAGTTGCTGCCTTTGTTTTGGTCTC
TCTCTTGGGGCCACAAAGGTGCACGTAGTAGTCTACGTACCTGGTACGAG
CAGTAGCCCCTTTCTGGCGCGCAGAATATCAGGCACATAGACAAACATGA
AGGCATTGAAAAGCAAGGAAGGAAGAAAGAGTCTCGTGTTCTCTCCGCCG
TGTTGACCCCGACTCAACCTCGTCCAACACGGCCGCAGACGCCAGGCTGT
TGCTCCTCCACGGACACGGCGACCGCCCCTCGGAAGCTCAACACCACCGA
GCGGACTTGGTGAGCCACTTCGTCCTGAGGCTGGCCTGCTGCGGTGGCCG
CGCCGGCGAGGGCGAGAGCAAAGCAGGCGGAAGCGAAGGGAGAGGGGGGA
GGGGGGGGGAGGAAGCGGGTGGATGGAAAGGGAGGGGGCAGGGAGGGGGC
GGAGAGCACCACGATCGGCGATGGGAAAGGCGTGAGTGGTTTGTGCGCGC
CGAGACGGATCTGTTTGAGGCACGCCTCCACTGGCATCTCCGGGGCGGTG
CCGATAGAGCGGGCCGGAACGGACAGGTATGAACACATGCTGTAGCGTTT
TTTTTTTTTTAGCATTGCATGTTTCAGTTTCTGGAGCGAAATATGTCGGC
ATAGCAACATGTCTGTGCTGCGTGCATCCGATTCTGTTATGTGGTGTCCT
GTCGTGTCCTGTCGTGTCCTGTCCTGCCCTGTCATGCCCTGTCATGCTCT
GCCCTGTCCTGTCTCCAAGTTGTTATTAAAAACCATGGTCGGCTGCATGA
TTGCTTGCTCCTCCGCGCGGTGGACGATGGTTGCCCTTCGCTCATCGCCC
CTCCCCTACACCCCCGCCCGCCCCCGCCTGGTTTGCTGCTGTTTGTTGTG
TACTATTGCGGTATAATAGGAGACAGGCGCAAAGCCTGAAATGGAACCCG
CTTCTCTAAACGACCGGCTCCAGGCTCTCCGCGTCGTTTACAAACTGGGG
TGGCTGCAGCCGGTAGCAGACGGCCTCGACGACGCCAGCGCCGAACCAAC
CAGCCTGCGCGAAAGGGCTGATCGCGGAAGCACTGACCGCGAAAGCGCAG
GACGCGGGCGTGCTGATCGCGAAAACGCTGGTCGCGAAAGCGCTAAACAC
GAAATCGCTGATCGCGGAAGCGCTGATCGGGGCATAGAGCGTAGCAAGGT
GAAACGCCCGCGATGGAACTCCTTCCCGTCCCCACAAGAGGCGGTACCTC
GGTCGCGCTTAAAAAAAACGGGCGCTTACGATGGACGCGCGGGCATTCCT
CCCCCCCCTCCGCCATGGGTGTCGGGACATCCGACGCCGCAGGCGTCGTA
TGGTAGTAGTATCGGCTACGTGTCGTGTCCGTTCGAAAAAGTGCTTCCGA
TGGTCAGGTCGCGCCGGGTGCTCCTGCGGGATGGAAAGGCGTTGCTTGCA
CCGGGACAGGTGCCGGCGGCGGTGGTTCAGCACTTCAAGGAGCTCCTGAG
GAAGGGGATGGCAATCGCCGAGAGGGGTCTGCCCGGGGTGGAGAGGGACG
AAAGAGTCAAGGGGGTTCTCGCGCAGGTGATTGAAAAAAAAAAATGCGGA
GTTCGACTTGAGCACTTACACGCTAGTTTTGTTTTGATTTGTTTTGGAAT
TTACTTTGTGTTTTTCCCCGACGTGTGGGGCGGTGCGAGGCGATTCGGTT
GTACCCCAAGGTGTGATTTCTCGTGAGGGCTGGTGTGCAGACCTGTGCCC
ACCTTCGGCTATTAATGGTCGAAATATGCTGTTAGTAGATCTATACACTA
TATCCCTAACCCTAACCCCGACCGCCTGAGAAATCGTCGGAACGAAGATG
GTTGATGTAGTGAGGCGTGCGTGTGGACTATCATACCAAACATTTTGTTT
CGTCCAAGCTGGGCCAAGTCGTGAACACCTCATAAGTACTGAGTTTTTAT
TACTTCCGGAACATGGCCCCCTATATATATATATATATATATATATATAT
GTTGCTCCCGTTCTCGCCGTGTCTCGCTCGCACTGTCATAGTTTCCCCTG
GTTTGCTCTGGTTTGCTCTGGCTTGCCGTGGCTTGTGCTGGCCTACCCTT
GCTCGCCATTGCCTGCCCTGAATTGCCTTGGCTCGCCCTGGCTTGCCCTG
ACTTGCCCTGACTTGCAATGGCTTGCCCTGGCTTGCCCTGGCTTGTACTT
TAGAGGGGGAAGATACAGCACGCTATGGAATAGCAACGATAGCCCTTTAC
CCTCTTGCCGGTGCCCCAATCATTTGTTTTGAATGCGGATGAGAATCCGA
CTGCTTGTACATCTGCCTCTTTAGCTCTAACGCACTTACAGAACTATTTT
TTGACGCCCCCTGGGGTACGCAGTACTACAAACTACTGCTGTTGTTTTGT
TTTAGTTTATGTTTCCTGATTTTCTTTTCATTTAAGTTTGGAGCCTTTTC
TTGTGACCACAGTCGAGATTACGAGGATGACAGCATCACCACCAACAATG
ACGCCGACAACAGCGACAACAACAACAACAACAACAACAACCACAACACT
CAACACTCACTATTACTATGTGGTACACAGCAGTTCATGTGGACAAATCG
ACCCATGGGAGTTCTTCCGCGCGCTCTCGTTTTTTCGTCGGCCAAGCCGA
GTCTCTTAACCTGAAATCTCACCTGCTACTATTAATAATGTTCAAAACGA
CTTTTGATATTCAATATGCTGATAGTAACCAACGAGCAGTATTAAATTGT
AGAGCAGGGCAAGGGTTGCCCTGCTGTTCCCTAGGTGTTACCATGTAATA
AAAGGTTGGACGGAGGTATGGAAATTCTCTCGCGATTCACGACATAGATA
TTTGCTAGGTAGAGTTTTACTTGTTTGAAGATGCTAGATTTTTTTTTCGT
TTTCGTTTTTTTGCCAATTCTTAACGTTTTTCCTCGGTTTTGTCCTTTTT
CGGTATTTTTCTAATTCGTGAGGTATTTGTTCAGAAATATAAGCTACGCT
TGGCTATTCTTATGAACACGTACGAAAAGGCTCAGGGACCATGGGTAGGG
GTCAAGAAATATATATAAAAAAATATAAAGACGTTTTTCTCGGGCGAGCT
ACAATTCAAAACATTTGATAATAGTGGGAAAACAAGAAACAGGAATGCTG
GTCCAGTCCGAATTTCTTATTCGTGAAAGGTACGTTTTATACCGACTTCA
GTATAACCGCTATCAAATTTCGTATTTTCCTGTCATTTGCTCTTACAGCG
GGCTCCTTTACCTGTATTCTGGTAGAGGGCAAGATTTTGTTTCCAACGAG
CAGTATTAAATAGTACCCTGGTGTGCTATTAACAAGCAGTATGCCAATGA
TGTTCAATATGCCAACAATATTCAACATGCTATTAATGCATTAATATCCT
ATACGCTAGTACAGTAGTGTCCACTACGCTAGTAATACTCAATGCGCTAT
TATTAACTACTACAAGAACGGCCCTCTCACAAGAATTTCTTTCCTTTTTA
GTTCCTTTTTTTTGGCAGTGGACCGGTATTGTATGCTTCCAATATCCAAT
ATGCTTTTTTTACGTGCAATATTATTAGGTGAGGAGAGATATCGACAGAA
CGCTTCGCGGTCGCCACCAAGAAGCCGGTGACGACCCTCGCGCGTCGATC
GCCATCACCAGGGAAACCATCGACCAGGTCGCCGAGAAACACTTCCCCCT
CTGCATGCGGCGGACGCTGCATGTCCTCCGTCGAGACCACCACCTCAAGT
ACGAGGCGCGGGTTCAGCTTGTCAGCTTTCTCGGCAACGCTGGAATGGAG
GTGACCTAAAACAAATCGCGGGAACGTTTGATTGATTAATTGACGTACAC
TATGTACGTAAACCCACTTTATTTTGGTTCCTCCCCAGTCACGCTTTTTC
TCGCGTTTTACGTAGGTACCGGCATGAGATGTAACCGCCAGTGATACGGA
CCGATTCTGCTTTAAAGCTGTCGGTGAGCAGAGCCATTGCGAACACCCGG
TAGGGTCTGTCTACTGGAGGGGCAGAATTCGTTCGTCGCATAAACTAAGT
CTACCCAAGGTATAGTATGCCTGATATCCTCCCAAACCTATGGTATTTAT
AGTATACCAGATGAAGTACCAGAATGTATTGTGAATGTTTTAGTTGGTCC
GTACATTCGTGATTCGGGGCAGTAGCCCTAGATTGTGGTTCGAGTTATGG
TCCAGGGTTACAGAGGCGAGGTTGGGATCGGTCGTGACTTGTAAAAATAG
ACGCCCCAAAAAGCGCGGTTCAACAGCTTCAACAATCGTACCCCAGGTAA
TGTACCTGCAGTAGTACTTTTGCCCGGTAGGTTTAGTGGGCAGGCAGCCC
TGGTAAAGGGAGCCCATTGTTCTTCTTTGGTCAGTGGTGGTCGCCAGCCG
ATAGGAAGGCGGCCAACGTCGCTTCGGCAAGTCTTGTGTCCGCCGTTTCT
GCGTATGTATACAGCTTGTTAGTGTGCACACTGAACGGTACGGATCAATT
CAGTGTTATTGTACGCTGTCTCAGCGAAGGAAACGTGGGGGCTGAATGGT
ACGTATGGTAGGTATATGGTGCTGTTGCGCTCTACAAAAACTCGTGTATC
CATCGTCGTCCCCTGCTTGTCCTATTATGGCCTTCTTGTTCTTCTGCTGG
CTTTGGTTGTGTGTGTTTTATTTGATTTTTTTTGTTCTTGTTCTGATTTT
TTTGCCAGGTTCACGAGCTGCTGGGGCTGTGGCGAGAAGAATTTCCCAGA
GGCATGCCGCCGGAAGAGTACGCGCGGAAGAGAAACCAGTTGAGCAACAG
C
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig13237:2745..8345-

>mRNA_M-pyrifera_M_contig13237.5889.1 ID=mRNA_M-pyrifera_M_contig13237.5889.1|Name=mRNA_M-pyrifera_M_contig13237.5889.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=2892bp|location=Sequence derived from alignment at M-pyrifera_M_contig13237:2745..8345- (Macrocystis pyrifera P11B4 male)
ATGGAGACGCGTGTGCCACCCGGGTTGTACCTGGAACCTCCATCATTCGA
TATCGATCTCGACGACTTCGCGTTACTGCCGCGCCGCAGGATTGAGGCCA
TCCGTCTCCTCCGTGAGGGCCAAGCCACCGAGATTTCGAATGGGAGCTGT
GAACAGCAAGCGCTTACAGCAGGCAAATGGAGACGCGTGTGCCACCCGGG
TTGTACCTGGAACCTCCATCATTCGATATCGATCTCGACGACTTCGCGTT
ACTGCCGCGCCGCAGGATTGAGGCCATCCGTCTCCTCCGTGAGGGCCAAG
CCACCGAGATTTCGAATGGGAGCTGTGAACAGCAAGCGCTTACAGCAGGC
AAGCTGTTGCTCCTCCACGGACACGGCGACCGCCCCTCGGAAGCTCAACA
CCACCGAGCGGACTTGGTGAGCCACTTCGTCCTGAGGCTGGCCTGCTGCG
GCTGTTGCTCCTCCACGGACACGGCGACCGCCCCTCGGAAGCTCAACACC
ACCGAGCGGACTTGGTGAGCCACTTCGTCCTGAGGCTGGCCTGCTGCGGC
GGAAGCGAAGGGAGAGGGGGGAGGGGGGGGGAGGAAGCGGGTGGATGGAA
AGGGAGGGGGCAGGGAGGGGGCGGAGAGCACCACGATCGGCGATGGGAAA
GGCGTGAGTGGTTTGTGCGCGCCGAGACGGATCTGTTTGAGGCACGCCTC
CACTGGCATCTCCGGGGCGGTGCCGATAGAGCGGGCCGGAACGGACAGGC
GGAAGCGAAGGGAGAGGGGGGAGGGGGGGGGAGGAAGCGGGTGGATGGAA
AGGGAGGGGGCAGGGAGGGGGCGGAGAGCACCACGATCGGCGATGGGAAA
GGCGTGAGTGGTTTGTGCGCGCCGAGACGGATCTGTTTGAGGCACGCCTC
CACTGGCATCTCCGGGGCGGTGCCGATAGAGCGGGCCGGAACGGACAGGA
GACAGGCGCAAAGCCTGAAATGGAACCCGCTTCTCTAAACGACCGGCTCC
AGGCTCTCCGCGTCGTTTACAAACTGGGGTGGCTGCAGCCGGTAGCAGAC
GGCCTCGACGACGCCAGCGCCGAACCAACCAGCCTGCGCGAAAGGGCTGA
TCGCGGAAGCACTGACCGCGAAAGCGCAGGACGCGGGCGTGCTGATCGCG
AAAACGCTGGTCGCGAAAGCGCTAAACACGAAATCGCTGATCGCGGAAGC
GCTGATCGGGGCATAGAGCGTAGCAAGGTGAAACGCCCGCGATGGAACTC
CTTCCCGTCCCCACAAGAGGCGGTACCTCGGTCGCGCTTAAAAAAAACGG
GCGCTTACGATGGACGCGCGGGCATTCCTCCCCCCCCTCCGCCATGGGTG
TCGGGACATCCGACGCCGCAGGCGTCGTATGGTAGTAGTATCGGCTACGT
GTCGTGTCCGTTCGAAAAAGTGCTTCCGATGGTCAGGTCGCGCCGGGTGC
TCCTGCGGGATGGAAAGGCGTTGCTTGCACCGGGACAGGTGCCGGCGGCG
GTGGTTCAGCACTTCAAGGAGCTCCTGAGGAAGGGGATGGCAATCGCCGA
GAGGGGTCTGCCCGGGGTGGAGAGGGACGAAAGAGTCAAGGGGGTTCTCG
CGCAGGAGACAGGCGCAAAGCCTGAAATGGAACCCGCTTCTCTAAACGAC
CGGCTCCAGGCTCTCCGCGTCGTTTACAAACTGGGGTGGCTGCAGCCGGT
AGCAGACGGCCTCGACGACGCCAGCGCCGAACCAACCAGCCTGCGCGAAA
GGGCTGATCGCGGAAGCACTGACCGCGAAAGCGCAGGACGCGGGCGTGCT
GATCGCGAAAACGCTGGTCGCGAAAGCGCTAAACACGAAATCGCTGATCG
CGGAAGCGCTGATCGGGGCATAGAGCGTAGCAAGGTGAAACGCCCGCGAT
GGAACTCCTTCCCGTCCCCACAAGAGGCGGTACCTCGGTCGCGCTTAAAA
AAAACGGGCGCTTACGATGGACGCGCGGGCATTCCTCCCCCCCCTCCGCC
ATGGGTGTCGGGACATCCGACGCCGCAGGCGTCGTATGGTAGTAGTATCG
GCTACGTGTCGTGTCCGTTCGAAAAAGTGCTTCCGATGGTCAGGTCGCGC
CGGGTGCTCCTGCGGGATGGAAAGGCGTTGCTTGCACCGGGACAGGTGCC
GGCGGCGGTGGTTCAGCACTTCAAGGAGCTCCTGAGGAAGGGGATGGCAA
TCGCCGAGAGGGGTCTGCCCGGGGTGGAGAGGGACGAAAGAGTCAAGGGG
GTTCTCGCGCAGGTGAGGAGAGATATCGACAGAACGCTTCGCGGTCGCCA
CCAAGAAGCCGGTGACGACCCTCGCGCGTCGATCGCCATCACCAGGGAAA
CCATCGACCAGGTCGCCGAGAAACACTTCCCCCTCTGCATGCGGCGGACG
CTGCATGTCCTCCGTCGAGACCACCACCTCAAGTACGAGGCGCGGGTTCA
GCTTGTCAGCTTTCTCGGCAACGCTGGAATGGAGGTGAGGAGAGATATCG
ACAGAACGCTTCGCGGTCGCCACCAAGAAGCCGGTGACGACCCTCGCGCG
TCGATCGCCATCACCAGGGAAACCATCGACCAGGTCGCCGAGAAACACTT
CCCCCTCTGCATGCGGCGGACGCTGCATGTCCTCCGTCGAGACCACCACC
TCAAGTACGAGGCGCGGGTTCAGCTTGTCAGCTTTCTCGGCAACGCTGGA
ATGGAGGTTCACGAGCTGCTGGGGCTGTGGCGAGAAGAATTTCCCAGAGG
CATGCCGCCGGAAGAGTACGCGCGGAAGAGAAACCAGTTGAGCAACAGCG
TTCACGAGCTGCTGGGGCTGTGGCGAGAAGAATTTCCCAGAGGCATGCCG
CCGGAAGAGTACGCGCGGAAGAGAAACCAGTTGAGCAACAGC
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