mRNA_M-pyrifera_M_contig13190.5875.1 (mRNA) Macrocystis pyrifera P11B4 male
|
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig13190.5875.1 vs. uniprot
Match: D7FRK2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRK2_ECTSI) HSP 1 Score: 144 bits (362), Expect = 3.890e-41 Identity = 70/89 (78.65%), Postives = 80/89 (89.89%), Query Frame = 1
Query: 1 GLSPLAPDQWQFFLVSYAALFAINNVLRLPRFALSVSLAPAFDRFINFLMRRTGRGKAFATGLCVFLVNVCGTLSLMATGIVLASIFSG 267
GLSPL+P QWQ FLVSYA L+AINNVLR+PRFALSVSLAPAFDRFI FLM++TGRGK ATGLCVFLVN GT +L++TGI+LAS+FSG
Sbjct: 146 GLSPLSPGQWQVFLVSYATLWAINNVLRVPRFALSVSLAPAFDRFIEFLMKKTGRGKGVATGLCVFLVNFLGTFALLSTGILLASMFSG 234
BLAST of mRNA_M-pyrifera_M_contig13190.5875.1 vs. uniprot
Match: A0A6H5L4N7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4N7_9PHAE) HSP 1 Score: 142 bits (358), Expect = 3.480e-40 Identity = 70/89 (78.65%), Postives = 79/89 (88.76%), Query Frame = 1
Query: 1 GLSPLAPDQWQFFLVSYAALFAINNVLRLPRFALSVSLAPAFDRFINFLMRRTGRGKAFATGLCVFLVNVCGTLSLMATGIVLASIFSG 267
GLSPLAP QWQ FLVSYA L+AINNVLR+PRFALSVSLAPAFDRFI FLM+++GRGK ATGLCV LVN+ GT L++TGI+LASIFSG
Sbjct: 177 GLSPLAPGQWQVFLVSYATLWAINNVLRVPRFALSVSLAPAFDRFIEFLMKKSGRGKGVATGLCVVLVNILGTFVLLSTGILLASIFSG 265
BLAST of mRNA_M-pyrifera_M_contig13190.5875.1 vs. uniprot
Match: A0A835YJB4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJB4_9STRA) HSP 1 Score: 115 bits (289), Expect = 5.150e-30 Identity = 56/89 (62.92%), Postives = 68/89 (76.40%), Query Frame = 1
Query: 1 GLSPLAPDQWQFFLVSYAALFAINNVLRLPRFALSVSLAPAFDRFINFLMRRTGRGKAFATGLCVFLVNVCGTLSLMATGIVLASIFSG 267
GLSPLAP QWQFFL Y LF NN++R R ALS++LAPAFDR I F+M +T R +A AT +CVF VNV GT +LM+ GI+LAS+FSG
Sbjct: 163 GLSPLAPGQWQFFLSVYGGLFVFNNIIRPARLALSLALAPAFDRLIAFIMAKTKRSRAVATAICVFFVNVLGTTALMSGGILLASLFSG 251
BLAST of mRNA_M-pyrifera_M_contig13190.5875.1 vs. uniprot
Match: A0A6V1QBW0_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1QBW0_HETAK) HSP 1 Score: 101 bits (252), Expect = 1.750e-24 Identity = 48/89 (53.93%), Postives = 61/89 (68.54%), Query Frame = 1
Query: 1 GLSPLAPDQWQFFLVSYAALFAINNVLRLPRFALSVSLAPAFDRFINFLMRRTGRGKAFATGLCVFLVNVCGTLSLMATGIVLASIFSG 267
GLSPLAP QW FL Y F + NV+R RFA SV + P FDR + F+M+RTG K A G+ VFLVN+CGT +L+ TG+ LAS+ +G
Sbjct: 155 GLSPLAPGQWPQFLAVYGGFFVVQNVIRPLRFAFSVFMTPVFDRMVAFIMKRTGLSKPKAFGVTVFLVNICGTFTLLFTGVTLASLAAG 243
BLAST of mRNA_M-pyrifera_M_contig13190.5875.1 vs. uniprot
Match: A0A7S1ICX9_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1ICX9_9EUGL) HSP 1 Score: 90.1 bits (222), Expect = 1.540e-20 Identity = 42/89 (47.19%), Postives = 62/89 (69.66%), Query Frame = 1
Query: 1 GLSPLAPDQWQFFLVSYAALFAINNVLRLPRFALSVSLAPAFDRFINFLMRRTGRGKAFATGLCVFLVNVCGTLSLMATGIVLASIFSG 267
G+SPL QW FL+ Y +AINNV+R R +LS+++AP F+R + FL R+TG + A+ L VFLVN+CGT +L+ G+ +AS+ +G
Sbjct: 111 GVSPLVKGQWSKFLIIYVGFYAINNVIRPLRVSLSIAIAPLFERAVKFLERKTGFNRRNASLLLVFLVNICGTCTLLFLGVSIASLLAG 199
BLAST of mRNA_M-pyrifera_M_contig13190.5875.1 vs. uniprot
Match: A0A7S4CVH7_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4CVH7_9EUGL) HSP 1 Score: 86.3 bits (212), Expect = 2.710e-19 Identity = 39/89 (43.82%), Postives = 64/89 (71.91%), Query Frame = 1
Query: 1 GLSPLAPDQWQFFLVSYAALFAINNVLRLPRFALSVSLAPAFDRFINFLMRRTGRGKAFATGLCVFLVNVCGTLSLMATGIVLASIFSG 267
GL+PLA QW FL+ Y +A+NN+LR R ++++++AP F++ ++FL ++TG G+ ++ L VFLVNVCGT SL+ G +A++ +G
Sbjct: 86 GLTPLAAGQWSKFLLIYVGCYAVNNLLRPLRVSIAIAIAPYFEKAVHFLEKKTGFGRRASSALLVFLVNVCGTCSLLFFGASVATVAAG 174
BLAST of mRNA_M-pyrifera_M_contig13190.5875.1 vs. uniprot
Match: A0A7S0YP80_9CRYP (Hypothetical protein n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0YP80_9CRYP) HSP 1 Score: 82.4 bits (202), Expect = 5.910e-17 Identity = 43/95 (45.26%), Postives = 59/95 (62.11%), Query Frame = 1
Query: 1 GLSPLAPDQWQFFLVSYAALFAINNVLRLPRFALSVSLAPAFDRFINFLMRRTGR------GKAFATGLCVFLVNVCGTLSLMATGIVLASIFSG 267
GLSPLA QW FL Y +A+ N++R RFALSV++AP F+RF+ F+ +R K A G+ VFLVN+ GTLS + G+ LA+ +G
Sbjct: 184 GLSPLAAGQWPKFLAVYGGFWAVLNIIRPARFALSVAIAPVFERFVTFVQKRASAVTKKEVPKPVAFGIVVFLVNLLGTLSYLFLGLTLATSIAG 278
BLAST of mRNA_M-pyrifera_M_contig13190.5875.1 vs. uniprot
Match: A0A6T8J4B9_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A6T8J4B9_HEMAN) HSP 1 Score: 79.0 bits (193), Expect = 1.100e-15 Identity = 43/95 (45.26%), Postives = 57/95 (60.00%), Query Frame = 1
Query: 1 GLSPLAPDQWQFFLVSYAALFAINNVLRLPRFALSVSLAPAFDRFINFLMRRTGR------GKAFATGLCVFLVNVCGTLSLMATGIVLASIFSG 267
GLSPLA QW FL Y +A N++R RFALSV +AP F++F+ F+ +R K A G+ VFLVN GTLS + G+ LA+ F+G
Sbjct: 178 GLSPLAAGQWPKFLAVYGGFWAFLNLVRPARFALSVGIAPVFEKFVTFVQKRASDITKKEIPKPAAFGIVVFLVNFVGTLSYLFFGLTLATSFAG 272
BLAST of mRNA_M-pyrifera_M_contig13190.5875.1 vs. uniprot
Match: A0A061QVU3_9CHLO (Uncharacterized protein n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061QVU3_9CHLO) HSP 1 Score: 71.2 bits (173), Expect = 8.600e-13 Identity = 36/90 (40.00%), Postives = 54/90 (60.00%), Query Frame = 1
Query: 1 GLSPLAPDQWQFFLVSYAALFA-INNVLRLPRFALSVSLAPAFDRFINFLMRRTGRGKAFATGLCVFLVNVCGTLSLMATGIVLASIFSG 267
GLSPL QW +L++Y AL+A + VLR R ++ + P FD+ +++L + + A G VFLVN CGTLSL+A + S+ +G
Sbjct: 186 GLSPLTXGQWPQYLLAYVALYATVGTVLRPIRVMVAAGITPVFDKVVSYLQEKLKANRVVAIGTTVFLVNFCGTLSLLAIALGGTSLATG 275
BLAST of mRNA_M-pyrifera_M_contig13190.5875.1 vs. uniprot
Match: A0A7S2TNT9_9EUKA (Hypothetical protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2TNT9_9EUKA) HSP 1 Score: 68.9 bits (167), Expect = 5.170e-12 Identity = 41/90 (45.56%), Postives = 53/90 (58.89%), Query Frame = 1
Query: 1 GLSPLAPDQWQFFLVSYAALFAI-NNVLRLPRFALSVSLAPAFDRFINFLMRRTGRGKAFATGLCVFLVNVCGTLSLMATGIVLASIFSG 267
GLSPLAP QW FL L+A+ N+LR R ALSV++AP FDR I+FL R ++ A V L N ++ M +GI LAS+ G
Sbjct: 156 GLSPLAPGQWSKFLAVQVGLYAVFGNLLRPLRLALSVAIAPMFDRIISFLQARLKIPRSVAILANVILFNFIINITFMVSGIWLASVIVG 245 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig13190.5875.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig13190.5875.1 >prot_M-pyrifera_M_contig13190.5875.1 ID=prot_M-pyrifera_M_contig13190.5875.1|Name=mRNA_M-pyrifera_M_contig13190.5875.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=89bp GLSPLAPDQWQFFLVSYAALFAINNVLRLPRFALSVSLAPAFDRFINFLMback to top mRNA from alignment at M-pyrifera_M_contig13190:4477..5461+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig13190.5875.1 ID=mRNA_M-pyrifera_M_contig13190.5875.1|Name=mRNA_M-pyrifera_M_contig13190.5875.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=985bp|location=Sequence derived from alignment at M-pyrifera_M_contig13190:4477..5461+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig13190:4477..5461+ >mRNA_M-pyrifera_M_contig13190.5875.1 ID=mRNA_M-pyrifera_M_contig13190.5875.1|Name=mRNA_M-pyrifera_M_contig13190.5875.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=534bp|location=Sequence derived from alignment at M-pyrifera_M_contig13190:4477..5461+ (Macrocystis pyrifera P11B4 male)back to top |