mRNA_M-pyrifera_M_contig1315.5865.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig1315.5865.1 vs. uniprot
Match: D7FLY2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FLY2_ECTSI) HSP 1 Score: 231 bits (588), Expect = 3.480e-70 Identity = 161/339 (47.49%), Postives = 194/339 (57.23%), Query Frame = 1
Query: 31 RKKKRVAAHIKD--AAEKRAASAFSGNSGEDQRTQLLASPLGVGRPKRPREPGRLCSVSYSAADDPGRKERERAEAINYLQAWMSMRKAKEEADAGGVASS-VSGLWKFSKNTQSWLLRHLYSEDEIDEGSFGTLCLYLEGLKGSGRERVLAAAQAVIDKHGPDEGEEQTAAAREAAVPSTAGAEIETVDETVADEPAVVVPSGYNSDSSEEGEESGGDTAAENMKGDAMIAEESPPEV--APTAEAGEXXXXXXXXXXXXXXXXXX----------------VAEEREGAGVEVSTPAAKKPRKKARSALTGDSKAEAKARTALMAYERALQVAELLS 984
+KKKRVA HI++ ++ AA++ G G D+R LLA+PLGVG+PKRPREP S+ A DDP RKE+ER +A NYL AW+++RKA E A+ GVA +G+WKF+KNTQ+WLLRH++S+DEID+ F TLCLYLEGLKG+GR+RVLAAAQA+IDKHGPDEG+EQTAA REAAV A VVPSGYNSD A T AGE VE PA KKPRK ARSALTG KAEAKA+ A +AYERALQVAE+L+
Sbjct: 9 KKKKRVAVHIRENIKGKREAAASADGEVGADKRAPLLAAPLGVGKPKRPREPADAASLG-KAKDDPARKEKERTDANNYLVAWLTVRKANEAAEEAGVAPPPATGVWKFNKNTQAWLLRHVFSDDEIDDKRFETLCLYLEGLKGAGRQRVLAAAQAIIDKHGPDEGKEQTAAEREAAVAEVTXXXXXXXXXXX----AAVVPSGYNSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARTGNAGEFSFGFFDGTAEEATSKTTGKXXXXXXXXXXXXXXXXXXXXXXAVEALAPATKKPRK-ARSALTGKPKAEAKAKAAAVAYERALQVAEVLA 341
BLAST of mRNA_M-pyrifera_M_contig1315.5865.1 vs. uniprot
Match: A0A835Z1T3_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1T3_9STRA) HSP 1 Score: 82.0 bits (201), Expect = 2.940e-15 Identity = 61/169 (36.09%), Postives = 85/169 (50.30%), Query Frame = 1
Query: 34 KKKRVAAHIKDAAEKRAASAFSGNSGEDQRTQLLASPLGVGRPKRPREPGRLCSVSYSAADDPGRKE----------RERAEAINYLQAWMSMRKAKEEADAGGVASSVSGLWKFSKNTQSWLLRHLYSEDEIDEGSFGTLCLYLEGLKGSGRERVLAAAQAVIDKHGP 510
+KKRVAAHI+ A EKR A +G+D L + KRPR +V +A+ D G E RE +EA YL+AW K KE+ G WKF+K Q WL+RH+Y +D+ F L YL+G++G+ R+R+ A A+ I+K P
Sbjct: 9 RKKRVAAHIRAAQEKRKYKAAE--AGDDVHVPKLGA-------KRPRTE----AVKAAASADDGASEAKHTAQARALREMSEAKQYLRAW----KQKEDGQNSG--------WKFNKKVQVWLIRHMYDSARVDKKDFKLLAAYLDGMQGAARQRLAAEARDAIEKCAP 152
BLAST of mRNA_M-pyrifera_M_contig1315.5865.1 vs. uniprot
Match: A0A7S1ZNI3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1ZNI3_9STRA) HSP 1 Score: 66.2 bits (160), Expect = 3.970e-9 Identity = 39/98 (39.80%), Postives = 56/98 (57.14%), Query Frame = 1
Query: 196 VSYSAADDPGRKERERAEAINYLQAWMSMRKAKEEADAGGVASSVSGLWKFSKNTQSWLLRHLYSEDEIDEGSFGTLCLYLEGLKG-SGRERVLAAAQ 486
++ SAA K ++ EA +YL W K + D WKF+KNTQSWL+RH+Y D +D+G+F +C YL G+KG S R+R+L A+
Sbjct: 47 ITTSAAKT-NNKVKDPIEAKSYLSLW------KADKDT----------WKFNKNTQSWLVRHMYLVDYVDKGTFAVMCDYLSGMKGQSCRDRILEDAK 127
BLAST of mRNA_M-pyrifera_M_contig1315.5865.1 vs. uniprot
Match: A0A5A9N773_9TELE (Uncharacterized protein n=1 Tax=Triplophysa tibetana TaxID=1572043 RepID=A0A5A9N773_9TELE) HSP 1 Score: 63.5 bits (153), Expect = 1.610e-8 Identity = 33/92 (35.87%), Postives = 49/92 (53.26%), Query Frame = 1
Query: 250 AINYLQAWMSMRKAKEEADAGGVASSVSGLWKFSKNTQSWLLRHLYSEDEIDEGSFGTLCLYLEGLKGSGRERVLAAAQAVIDKHGPDEGEE 525
A+ YL W K+E WKF K Q+WLL++++ ++ + FG L YLEGL+GS +E+ L A+A++ G EGEE
Sbjct: 76 ALEYLSCWSER---KDE-------------WKFQKTRQTWLLQNMFDRVKVPDSYFGVLLAYLEGLRGSAKEKTLQKAEALVRWEGQGEGEE 151
BLAST of mRNA_M-pyrifera_M_contig1315.5865.1 vs. uniprot
Match: A0A0L0T4I0_ALLM3 (Uncharacterized protein n=1 Tax=Allomyces macrogynus (strain ATCC 38327) TaxID=578462 RepID=A0A0L0T4I0_ALLM3) HSP 1 Score: 63.5 bits (153), Expect = 5.920e-8 Identity = 38/107 (35.51%), Postives = 54/107 (50.47%), Query Frame = 1
Query: 232 ERERAEAINYLQAWMSMRKAKEEADAGGVASSVSGLWKFSKNTQSWLLRHLYSEDEIDEGSFGTLCLYLEGLKGSGRERVLAAAQAVIDKHGPDEGEEQTAAAREAA 552
+ ER A+ YL W + R A W+FSKN Q WLL+HLY+ ++I + +F YLE L+G R R A+ +++ G D Q AAA +AA
Sbjct: 119 DEERDTAVAYLHEWKANRAA----------------WRFSKNKQGWLLKHLYTRNKIPDSAFAIAVEYLEDLRGVARTRAFDEAKRIVENDGRDP---QKAAAADAA 206
BLAST of mRNA_M-pyrifera_M_contig1315.5865.1 vs. uniprot
Match: UPI001F128594 (uncharacterized protein C7orf50-like isoform X2 n=1 Tax=Lynx rufus TaxID=61384 RepID=UPI001F128594) HSP 1 Score: 62.4 bits (150), Expect = 8.800e-8 Identity = 31/84 (36.90%), Postives = 46/84 (54.76%), Query Frame = 1
Query: 250 AINYLQAWMSMRKAKEEADAGGVASSVSGLWKFSKNTQSWLLRHLYSEDEIDEGSFGTLCLYLEGLKGSGRERVLAAAQAVIDK 501
A++YL++W K E WKF K Q+WLL H+Y +D++ + F TL YLEGL+G RE + A+A++ K
Sbjct: 120 ALDYLRSWAQ----KHEE------------WKFQKTRQTWLLLHMYDDDQVPDELFSTLLAYLEGLRGRARELTVQKAEALMQK 187
BLAST of mRNA_M-pyrifera_M_contig1315.5865.1 vs. uniprot
Match: UPI001D1A1FAC (uncharacterized protein C7orf50 homolog isoform X3 n=1 Tax=Felis catus TaxID=9685 RepID=UPI001D1A1FAC) HSP 1 Score: 61.2 bits (147), Expect = 9.510e-8 Identity = 31/84 (36.90%), Postives = 44/84 (52.38%), Query Frame = 1
Query: 250 AINYLQAWMSMRKAKEEADAGGVASSVSGLWKFSKNTQSWLLRHLYSEDEIDEGSFGTLCLYLEGLKGSGRERVLAAAQAVIDK 501
A++YL+ W K E WKF K Q+WLL H+Y D++ + F TL YLEGL+G RE + A+A++ K
Sbjct: 69 ALDYLRGWAQ----KHEK------------WKFQKTRQTWLLLHMYDNDQVPDELFSTLLAYLEGLRGRARELTVQKAEALMQK 136
BLAST of mRNA_M-pyrifera_M_contig1315.5865.1 vs. uniprot
Match: A0A7S3P481_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3P481_9STRA) HSP 1 Score: 60.8 bits (146), Expect = 1.680e-7 Identity = 35/83 (42.17%), Postives = 48/83 (57.83%), Query Frame = 1
Query: 244 AEAINYLQAWMSMRKAKEEADAGGVASSVSGLWKFSKNTQSWLLRHLYSEDEIDEGSFGTLCLYLEGLKGS-GRERVLAAAQA 489
+EA YLQAW AKE WKF+KNTQSWLLRH+Y +++ + +F L Y++GL+G ++RVL A A
Sbjct: 28 SEASEYLQAWQ----AKEG-------------WKFNKNTQSWLLRHMYEAEKVSKTTFTILLEYMKGLQGKDAKKRVLEEATA 93
BLAST of mRNA_M-pyrifera_M_contig1315.5865.1 vs. uniprot
Match: A0A485NF11_LYNPA (Uncharacterized protein n=1 Tax=Lynx pardinus TaxID=191816 RepID=A0A485NF11_LYNPA) HSP 1 Score: 61.2 bits (147), Expect = 2.150e-7 Identity = 31/84 (36.90%), Postives = 44/84 (52.38%), Query Frame = 1
Query: 250 AINYLQAWMSMRKAKEEADAGGVASSVSGLWKFSKNTQSWLLRHLYSEDEIDEGSFGTLCLYLEGLKGSGRERVLAAAQAVIDK 501
A++YL+ W K E WKF K Q+WLL H+Y D++ + F TL YLEGL+G RE + A+A++ K
Sbjct: 118 ALDYLRGWAQ----KHEE------------WKFQKTRQTWLLLHMYDNDQVPDELFSTLLAYLEGLRGRARELTVQKAEALMQK 185
BLAST of mRNA_M-pyrifera_M_contig1315.5865.1 vs. uniprot
Match: A0A6P4TWI7_PANPR (uncharacterized protein C7orf50 homolog n=4 Tax=Felidae TaxID=9681 RepID=A0A6P4TWI7_PANPR) HSP 1 Score: 60.8 bits (146), Expect = 2.270e-7 Identity = 31/84 (36.90%), Postives = 44/84 (52.38%), Query Frame = 1
Query: 250 AINYLQAWMSMRKAKEEADAGGVASSVSGLWKFSKNTQSWLLRHLYSEDEIDEGSFGTLCLYLEGLKGSGRERVLAAAQAVIDK 501
A++YL+ W K E WKF K Q+WLL H+Y D++ + F TL YLEGL+G RE + A+A++ K
Sbjct: 101 ALDYLRGWAQ----KHEN------------WKFQKTRQTWLLLHMYDNDQVPDELFSTLLAYLEGLRGRARELTVQKAEALMQK 168 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig1315.5865.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig1315.5865.1 >prot_M-pyrifera_M_contig1315.5865.1 ID=prot_M-pyrifera_M_contig1315.5865.1|Name=mRNA_M-pyrifera_M_contig1315.5865.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=329bp MVKSKGTKRGRKKKRVAAHIKDAAEKRAASAFSGNSGEDQRTQLLASPLGback to top mRNA from alignment at M-pyrifera_M_contig1315:7374..14458+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig1315.5865.1 ID=mRNA_M-pyrifera_M_contig1315.5865.1|Name=mRNA_M-pyrifera_M_contig1315.5865.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=7085bp|location=Sequence derived from alignment at M-pyrifera_M_contig1315:7374..14458+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig1315:7374..14458+ >mRNA_M-pyrifera_M_contig1315.5865.1 ID=mRNA_M-pyrifera_M_contig1315.5865.1|Name=mRNA_M-pyrifera_M_contig1315.5865.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1974bp|location=Sequence derived from alignment at M-pyrifera_M_contig1315:7374..14458+ (Macrocystis pyrifera P11B4 male)back to top |