mRNA_M-pyrifera_M_contig13119.5852.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig13119.5852.1
Unique NamemRNA_M-pyrifera_M_contig13119.5852.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
[Close]
BLAST of mRNA_M-pyrifera_M_contig13119.5852.1 vs. uniprot
Match: D7FGR6_ECTSI (NDK domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FGR6_ECTSI)

HSP 1 Score: 243 bits (620), Expect = 1.260e-79
Identity = 112/115 (97.39%), Postives = 113/115 (98.26%), Query Frame = 3 
Query:    3 MIWPTKEMAANHYADLSKKPFFGGLVDYFASGPIVAMVWEGPEVILTGRKMLGATNPNSSEPGSLRGDYCIRVGRNLIHGSDGGESAQHEIGMWFTEAECSAWPRTLDAWIVADN 347
            MIWPTKEMAANHYADLSKKPFF GLVDYF+SGPIVAMVWEGPEVILTGRKMLGATNPNSSEPGSLRGDYCIRVGRNLIHGSDGGESAQHEIGMWFTE ECSAWPRTLDAWIVADN
Sbjct:  123 MIWPTKEMAANHYADLSKKPFFSGLVDYFSSGPIVAMVWEGPEVILTGRKMLGATNPNSSEPGSLRGDYCIRVGRNLIHGSDGGESAQHEIGMWFTEEECSAWPRTLDAWIVADN 237
[Close]
BLAST of mRNA_M-pyrifera_M_contig13119.5852.1 vs. uniprot
Match: A0A835YSZ5_9STRA (Nucleoside diphosphate kinase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSZ5_9STRA)

HSP 1 Score: 188 bits (478), Expect = 3.040e-58
Identity = 84/115 (73.04%), Postives = 99/115 (86.09%), Query Frame = 3 
Query:    3 MIWPTKEMAANHYADLSKKPFFGGLVDYFASGPIVAMVWEGPEVILTGRKMLGATNPNSSEPGSLRGDYCIRVGRNLIHGSDGGESAQHEIGMWFTEAECSAWPRTLDAWIVADN 347
            MIW T+EMAANHY DL  +PFF  LV YFASGPIVAMVWEGP+VI TGRK+LGATNP +++ G+LRGD+C+  GRN+IHGSDG ESA HEIGMWFTE ECSA+ R++D+WIVADN
Sbjct:  109 MIWATEEMAANHYDDLKGRPFFPALVKYFASGPIVAMVWEGPDVIKTGRKILGATNPQAADVGTLRGDFCLTTGRNIIHGSDGPESAAHEIGMWFTEKECSAYSRSIDSWIVADN 223
[Close]
BLAST of mRNA_M-pyrifera_M_contig13119.5852.1 vs. uniprot
Match: A0A1W0ABA6_9STRA (Nucleoside diphosphate kinase n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0ABA6_9STRA)

HSP 1 Score: 176 bits (447), Expect = 1.400e-53
Identity = 79/115 (68.70%), Postives = 96/115 (83.48%), Query Frame = 3 
Query:    3 MIWPTKEMAANHYADLSKKPFFGGLVDYFASGPIVAMVWEGPEVILTGRKMLGATNPNSSEPGSLRGDYCIRVGRNLIHGSDGGESAQHEIGMWFTEAECSAWPRTLDAWIVADN 347
            M+  T+  A +HYADLS KPFFGGLV YFASGPIV MVWEG +VILTGRK+LGATNPN + PG+LRGD CI  GRNL+HGSDG +SA+HEIGMWFT+AE + + R++D W+V+DN
Sbjct:  106 MMTATEARARDHYADLSSKPFFGGLVKYFASGPIVCMVWEGNDVILTGRKILGATNPNQAAPGTLRGDNCISTGRNLVHGSDGPDSAKHEIGMWFTQAEINDYARSIDEWVVSDN 220
[Close]
BLAST of mRNA_M-pyrifera_M_contig13119.5852.1 vs. uniprot
Match: A0A7S2XZK8_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XZK8_9STRA)

HSP 1 Score: 176 bits (446), Expect = 2.040e-53
Identity = 76/115 (66.09%), Postives = 92/115 (80.00%), Query Frame = 3 
Query:    3 MIWPTKEMAANHYADLSKKPFFGGLVDYFASGPIVAMVWEGPEVILTGRKMLGATNPNSSEPGSLRGDYCIRVGRNLIHGSDGGESAQHEIGMWFTEAECSAWPRTLDAWIVADN 347
            +IW T+E    HY+DL+ +PFFGGLV YF+SGPIV MVWEGP+ + TGRKMLGATNP +S+PG++RGD+C+ VGRNLIHGSD  +SA+ EI  WFT  EC  WPRTLDAWI  DN
Sbjct:  107 LIWATEEKTKAHYSDLAARPFFGGLVKYFSSGPIVGMVWEGPDAVKTGRKMLGATNPLASDPGTIRGDFCVVVGRNLIHGSDATDSAEKEIANWFTPEECYDWPRTLDAWITEDN 221
[Close]
BLAST of mRNA_M-pyrifera_M_contig13119.5852.1 vs. uniprot
Match: A0A485KUH1_9STRA (Nucleoside diphosphate kinase n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KUH1_9STRA)

HSP 1 Score: 176 bits (445), Expect = 2.900e-53
Identity = 79/115 (68.70%), Postives = 96/115 (83.48%), Query Frame = 3 
Query:    3 MIWPTKEMAANHYADLSKKPFFGGLVDYFASGPIVAMVWEGPEVILTGRKMLGATNPNSSEPGSLRGDYCIRVGRNLIHGSDGGESAQHEIGMWFTEAECSAWPRTLDAWIVADN 347
            ++ PT+  A  HYADLS +PFF GLV YF+SGPIVAMVWEG +VILTGRK+LGATNPN + PG+LRGD CI  GRNL+HGSDG +SA+HEIGMWFT+AE + + R++D WIVADN
Sbjct:  107 LLTPTEARAREHYADLSGRPFFNGLVKYFSSGPIVAMVWEGTDVILTGRKILGATNPNQAPPGTLRGDNCISTGRNLVHGSDGPDSAKHEIGMWFTQAEINDYHRSIDDWIVADN 221
[Close]
BLAST of mRNA_M-pyrifera_M_contig13119.5852.1 vs. uniprot
Match: M4B5V5_HYAAE (Nucleoside diphosphate kinase n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4B5V5_HYAAE)

HSP 1 Score: 174 bits (441), Expect = 1.400e-52
Identity = 80/115 (69.57%), Postives = 93/115 (80.87%), Query Frame = 3 
Query:    3 MIWPTKEMAANHYADLSKKPFFGGLVDYFASGPIVAMVWEGPEVILTGRKMLGATNPNSSEPGSLRGDYCIRVGRNLIHGSDGGESAQHEIGMWFTEAECSAWPRTLDAWIVADN 347
            ++  T+E A  HYADLS++PFF GLVDYF SGPIV MVWEG +VILTGRK+LGATNPN + PG+LRGD CI  GRNL+HGSDG +SA+HEI MWFT AE S + R LD WIVADN
Sbjct:  113 LMTATEERAKAHYADLSERPFFPGLVDYFTSGPIVCMVWEGTDVILTGRKILGATNPNQAAPGTLRGDNCISTGRNLVHGSDGPDSAKHEISMWFTAAEMSNYDRALDTWIVADN 227
[Close]
BLAST of mRNA_M-pyrifera_M_contig13119.5852.1 vs. uniprot
Match: A0A067CQA9_SAPPC (Nucleoside diphosphate kinase n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CQA9_SAPPC)

HSP 1 Score: 174 bits (440), Expect = 1.610e-52
Identity = 77/115 (66.96%), Postives = 95/115 (82.61%), Query Frame = 3 
Query:    3 MIWPTKEMAANHYADLSKKPFFGGLVDYFASGPIVAMVWEGPEVILTGRKMLGATNPNSSEPGSLRGDYCIRVGRNLIHGSDGGESAQHEIGMWFTEAECSAWPRTLDAWIVADN 347
            ++  T+  A+ HYADL+ +PFFGGLV YFASGPIV MVWEG +VILTGRK+LGATNPN + PG+LRGD CI  GRNL+HGSDG +SA+HEIGMWFT+AE   + R++D W+VADN
Sbjct:  106 LMTATEARASEHYADLAGRPFFGGLVKYFASGPIVCMVWEGTDVILTGRKILGATNPNQAAPGTLRGDNCISTGRNLVHGSDGPDSAKHEIGMWFTQAEIQDYTRSIDEWVVADN 220
[Close]
BLAST of mRNA_M-pyrifera_M_contig13119.5852.1 vs. uniprot
Match: A0A6G0XYC2_9STRA (Nucleoside diphosphate kinase n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XYC2_9STRA)

HSP 1 Score: 173 bits (438), Expect = 3.340e-52
Identity = 78/115 (67.83%), Postives = 93/115 (80.87%), Query Frame = 3 
Query:    3 MIWPTKEMAANHYADLSKKPFFGGLVDYFASGPIVAMVWEGPEVILTGRKMLGATNPNSSEPGSLRGDYCIRVGRNLIHGSDGGESAQHEIGMWFTEAECSAWPRTLDAWIVADN 347
            ++ PT+  A  HYADL+ +PFF GLV YF+SGPIVAMVWEG +VILTGRK+LGATNPN + PG+LRGD CI  GRNL+HGSDG ESA+HEIGMWFT  E   + R++D WIVADN
Sbjct:  107 LLTPTEARAREHYADLAGRPFFNGLVKYFSSGPIVAMVWEGTDVILTGRKILGATNPNQAAPGTLRGDNCISTGRNLVHGSDGPESAKHEIGMWFTAEEIQDYERSIDEWIVADN 221
[Close]
BLAST of mRNA_M-pyrifera_M_contig13119.5852.1 vs. uniprot
Match: A0A024UVV3_9STRA (Nucleoside diphosphate kinase (Fragment) n=5 Tax=Aphanomyces TaxID=100860 RepID=A0A024UVV3_9STRA)

HSP 1 Score: 173 bits (438), Expect = 5.690e-52
Identity = 80/115 (69.57%), Postives = 92/115 (80.00%), Query Frame = 3 
Query:    3 MIWPTKEMAANHYADLSKKPFFGGLVDYFASGPIVAMVWEGPEVILTGRKMLGATNPNSSEPGSLRGDYCIRVGRNLIHGSDGGESAQHEIGMWFTEAECSAWPRTLDAWIVADN 347
            ++ PT+  A  HYADLS +PFF GLV YF+SGPIVAMVWEG +VILTGRK+LGATNPN + PG+LRGD  I  GRNLIHGSDG ESA+HEIGMWFT AE   + R +D WIVADN
Sbjct:  125 LLTPTEARAREHYADLSSRPFFNGLVKYFSSGPIVAMVWEGQDVILTGRKILGATNPNQAAPGTLRGDNTISTGRNLIHGSDGPESAKHEIGMWFTAAEIQDYERAIDEWIVADN 239
[Close]
BLAST of mRNA_M-pyrifera_M_contig13119.5852.1 vs. uniprot
Match: A0A662Y1S8_9STRA (Nucleoside diphosphate kinase n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662Y1S8_9STRA)

HSP 1 Score: 171 bits (432), Expect = 3.140e-51
Identity = 78/115 (67.83%), Postives = 93/115 (80.87%), Query Frame = 3 
Query:    3 MIWPTKEMAANHYADLSKKPFFGGLVDYFASGPIVAMVWEGPEVILTGRKMLGATNPNSSEPGSLRGDYCIRVGRNLIHGSDGGESAQHEIGMWFTEAECSAWPRTLDAWIVADN 347
            ++  ++E A  HYADLS++PFF GLV YF SGPIV MVWEG +VILTGR++LGATNPN + PG+LRGD CI  GRNL+HGSDG +SA+HEIGMWFT AE S + R LD WIVADN
Sbjct:  112 LMTASEERARAHYADLSERPFFPGLVKYFTSGPIVCMVWEGTDVILTGRQILGATNPNQAAPGTLRGDNCISTGRNLVHGSDGPDSAKHEIGMWFTPAEVSDYQRALDTWIVADN 226
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig13119.5852.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FGR6_ECTSI1.260e-7997.39NDK domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A835YSZ5_9STRA3.040e-5873.04Nucleoside diphosphate kinase n=1 Tax=Tribonema mi... [more]
A0A1W0ABA6_9STRA1.400e-5368.70Nucleoside diphosphate kinase n=1 Tax=Thraustothec... [more]
A0A7S2XZK8_9STRA2.040e-5366.09Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A485KUH1_9STRA2.900e-5368.70Nucleoside diphosphate kinase n=1 Tax=Aphanomyces ... [more]
M4B5V5_HYAAE1.400e-5269.57Nucleoside diphosphate kinase n=1 Tax=Hyaloperonos... [more]
A0A067CQA9_SAPPC1.610e-5266.96Nucleoside diphosphate kinase n=3 Tax=Saprolegniac... [more]
A0A6G0XYC2_9STRA3.340e-5267.83Nucleoside diphosphate kinase n=1 Tax=Aphanomyces ... [more]
A0A024UVV3_9STRA5.690e-5269.57Nucleoside diphosphate kinase (Fragment) n=5 Tax=A... [more]
A0A662Y1S8_9STRA3.140e-5167.83Nucleoside diphosphate kinase n=2 Tax=Nothophytoph... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig13119contigM-pyrifera_M_contig13119:1760..6459 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score244.2
Seed ortholog evalue3e-62
Seed eggNOG ortholog2880.D7FGR6
Preferred nameNDPK2
KEGG rclassRC00002
KEGG koko:K00940
KEGG ReactionR00124,R00139,R00156,R00330,R00570,R00722,R01137,R01857,R02093,R02326,R02331,R03530,R11894,R11895
KEGG Pathwayko00230,ko00240,ko00983,ko01100,ko01110,ko01130,ko04016,map00230,map00240,map00983,map01100,map01110,map01130,map04016
KEGG ModuleM00049,M00050,M00052,M00053
Hectar predicted targeting categoryother localisation
GOsGO:0000302,GO:0003674,GO:0003824,GO:0004550,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005739,GO:0005740,GO:0005758,GO:0006139,GO:0006165,GO:0006213,GO:0006220,GO:0006221,GO:0006241,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006979,GO:0007154,GO:0007165,GO:0007602,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009132,GO:0009141,GO:0009142,GO:0009147,GO:0009148,GO:0009163,GO:0009165,GO:0009199,GO:0009201,GO:0009208,GO:0009209,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009314,GO:0009411,GO:0009416,GO:0009507,GO:0009526,GO:0009532,GO:0009536,GO:0009570,GO:0009579,GO:0009581,GO:0009582,GO:0009583,GO:0009585,GO:0009605,GO:0009628,GO:0009636,GO:0009639,GO:0009719,GO:0009725,GO:0009733,GO:0009734,GO:0009755,GO:0009941,GO:0009987,GO:0010017,GO:0010033,GO:0010035,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019693,GO:0023052,GO:0031967,GO:0031970,GO:0031974,GO:0031975,GO:0032870,GO:0033554,GO:0034404,GO:0034599,GO:0034614,GO:0034641,GO:0034654,GO:0035690,GO:0042221,GO:0042455,GO:0042493,GO:0042542,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044429,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0046036,GO:0046131,GO:0046132,GO:0046134,GO:0046390,GO:0046483,GO:0046677,GO:0046939,GO:0050789,GO:0050794,GO:0050896,GO:0051606,GO:0051716,GO:0055086,GO:0061508,GO:0065007,GO:0070013,GO:0070301,GO:0070887,GO:0071214,GO:0071236,GO:0071310,GO:0071365,GO:0071478,GO:0071482,GO:0071489,GO:0071495,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:0097237,GO:0104004,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659,GO:1901700,GO:1901701
EggNOG free text desc.Nucleoside diphosphate kinase
EggNOG OGsCOG0105@1,KOG0888@2759
Ec32 ortholog descriptionNucleoside diphosphate kinase
Ec32 orthologEc-04_001140.1
EC2.7.4.6
COG Functional cat.F
BiGG ReactioniRC1080.CRv4_Au5_s16_g6072_t1
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko04131
Exons5
Model size392
Cds size348
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815808.0785246-UTR-M-pyrifera_M_contig13119:1759..17611622815808.0785246-UTR-M-pyrifera_M_contig13119:1759..1761Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig13119 1760..1761 +
1692277580.1505198-UTR-M-pyrifera_M_contig13119:1759..17611692277580.1505198-UTR-M-pyrifera_M_contig13119:1759..1761Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig13119 1760..1761 +
1622815808.1551256-UTR-M-pyrifera_M_contig13119:6417..64591622815808.1551256-UTR-M-pyrifera_M_contig13119:6417..6459Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig13119 6418..6459 +
1692277580.2169187-UTR-M-pyrifera_M_contig13119:6417..64591692277580.2169187-UTR-M-pyrifera_M_contig13119:6417..6459Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig13119 6418..6459 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815808.092656-CDS-M-pyrifera_M_contig13119:1761..18041622815808.092656-CDS-M-pyrifera_M_contig13119:1761..1804Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig13119 1762..1804 +
1692277580.1690185-CDS-M-pyrifera_M_contig13119:1761..18041692277580.1690185-CDS-M-pyrifera_M_contig13119:1761..1804Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig13119 1762..1804 +
1622815808.106009-CDS-M-pyrifera_M_contig13119:3259..34031622815808.106009-CDS-M-pyrifera_M_contig13119:3259..3403Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig13119 3260..3403 +
1692277580.1800916-CDS-M-pyrifera_M_contig13119:3259..34031692277580.1800916-CDS-M-pyrifera_M_contig13119:3259..3403Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig13119 3260..3403 +
1622815808.1190321-CDS-M-pyrifera_M_contig13119:4374..44301622815808.1190321-CDS-M-pyrifera_M_contig13119:4374..4430Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig13119 4375..4430 +
1692277580.1899035-CDS-M-pyrifera_M_contig13119:4374..44301692277580.1899035-CDS-M-pyrifera_M_contig13119:4374..4430Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig13119 4375..4430 +
1622815808.1317766-CDS-M-pyrifera_M_contig13119:4825..48731622815808.1317766-CDS-M-pyrifera_M_contig13119:4825..4873Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig13119 4826..4873 +
1692277580.1984856-CDS-M-pyrifera_M_contig13119:4825..48731692277580.1984856-CDS-M-pyrifera_M_contig13119:4825..4873Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig13119 4826..4873 +
1622815808.142787-CDS-M-pyrifera_M_contig13119:6360..64171622815808.142787-CDS-M-pyrifera_M_contig13119:6360..6417Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig13119 6361..6417 +
1692277580.2073033-CDS-M-pyrifera_M_contig13119:6360..64171692277580.2073033-CDS-M-pyrifera_M_contig13119:6360..6417Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig13119 6361..6417 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig13119.5852.1prot_M-pyrifera_M_contig13119.5852.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig13119 1762..6417 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig13119.5852.1

>prot_M-pyrifera_M_contig13119.5852.1 ID=prot_M-pyrifera_M_contig13119.5852.1|Name=mRNA_M-pyrifera_M_contig13119.5852.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=116bp
MIWPTKEMAANHYADLSKKPFFGGLVDYFASGPIVAMVWEGPEVILTGRK
MLGATNPNSSEPGSLRGDYCIRVGRNLIHGSDGGESAQHEIGMWFTEAEC
SAWPRTLDAWIVADN*
back to top

mRNA from alignment at M-pyrifera_M_contig13119:1760..6459+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig13119.5852.1 ID=mRNA_M-pyrifera_M_contig13119.5852.1|Name=mRNA_M-pyrifera_M_contig13119.5852.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=4700bp|location=Sequence derived from alignment at M-pyrifera_M_contig13119:1760..6459+ (Macrocystis pyrifera P11B4 male)
AGATGATCTGGCCCACGAAGGAGATGGCTGCCAACCACTACGCCGGTGAG
GCTGCGAGAGTATTTGCCAGTATCATAGGCAGTACCAGGGGTAGGCAGTA
CCAATAGCCGACAAGGGCAGGCATCAGGATTCCTTGGAAGCACTTGCGTA
CGTATATACGTATTTTCTAGCAGTCGCATGCCGGGAGGGATCCCGATTTT
ACGAGAATATCGCCGGTCCTTTTACAGTAGTTTTTAAATCTCATGTACCT
TGAAATCTATCAATTCAAAAACACCACACAGCCGAAGCAAGACACACACC
CCCACGCCCACACAACAATCAAATCCCACCCCAGCCACCCGCACCCCACT
CTTGAGAACTAACCTCAGCCAGAGCACCAACCCTCGAGAGCTTTCGGTAT
ATTTGATGCTTCCTTGCCCTGATTCCCGCGATCGCAGCTTGGCATGGCGA
TTTTCATCGTCGAGAGTCGGTGTGTGCCTGGTACTGCTGTATTAACTTCC
CAGCCCTGCAGGTACTCGTGCACGGGCTGCAAGGGTCTTGAGCATAACCT
GTGCTTTAAGCAGCATCACAGCAGTCACGTCTTCCATGCTACAGCCGACG
GATTCTGCTGCGGTCTAACAGGCTGCAATAGGAATACTGCCGAGGCATTG
TTGTCATTGCAGCCCAGTTAGGCCGCAGTAGAATCCGTCGTCTGGAGCAT
GGAAGACGTGACTGCTGTGATGCTGCAAGCACAGGTTATGCGCAAGACCT
TGCCTGCGGCCCTTCTTCCACGAGTGCTGCCCGCCTGCAAGGGTTTGGAA
GTTACACCCACCGTCGACGGTGCAATGCGCCATGCCAAGCTTCGGTCGCG
GGGATCAGGGCGAGGAAGTGTCTAATATACCGACAGATTTCAAGGGCTGG
TACTGTGGCTGAGCTAGTTCTTCGAGTGGGGAGTGGGTGGCTGGGTTGGG
AGTTGACTGTTGTGTGGGGGTGAGGCGTTTGTGTCTTAGTTTCGATTCGG
TTTGTATTTTTAAATGAACAGGCTATAATGACAATTTAAAAACAAGAAAA
GGGGTCTCGCCGACCCACACAGGCGACAGACTCGGAACTCGTGCTCGAGG
GCTTTAGGACTGCTGTAATCCCGTTTTGAGGAGATATTGCTAGAAAATGG
AGTTATGTTCGTTTACAGTGTAGTTCTAAAAGGGCTGAGACCTTAAGGAC
TACACTCCCGTTTTAGAGACAAGTTACTTAAAGGTTTATTTAGATACTGG
TACGATGTTAATATGTTTCTGGACAGCAGTGCACTAGTAACAGCTTTATT
CCCGAGATGTCCATTCCCTGTGTTGCCTCAGTCGTCGGCTCTATGGCTGA
CATGTTGCTGCCGTCGTATGTTCATATCACAACTTCGCGTTCCTTCGTGT
CTCGGTGGCCGGCTCAGTGATTCATAGTTGACCTTGCGTGTCCACAGAAG
GGTCAAAAAGTGAAATTGTATTGCCGCCGTGAAACGTGTACACCCTCCAG
ACCTGTCGAAGAAGCCTTTCTTCGGCGGCCTCGTGGACTACTTCGCCAGT
GGCCCCATCGTGGCCATGGTGTGGGAAGGGCCCGAGGTTATCCTAACCGG
CCGTAAGATGCTGGGCGCCACCAACCCCAACTCTTCTGAGCCAGGTTCGA
TGTTCATGTGTAGCTCCCGGCCGCGGTCAGAGTGCGCTTGTTTGTATACG
AGGTATACCTGGTACTTCGTATATATGATAGCTTGGTTTGTGACATCAGC
AGAAGTGGTAAGCTATTCGTTCTGTTTTCCATCCCCAGTCGGTCTGCTCT
TGATTTTCGACATGGCCGTTTTTTGTAACATAAGCCGAGGCGGATACATA
GGCTGTTCATTGTTGCGGTAGATAAGCAAGCTTGTGGGGTAGGGGGAGCG
GCAATGGGGCGAAAATAGTGCCAGGTATAGCGTATACTACGTTTGTGTAT
CGACGCAAACCGTATACTTCGGTGTTAATTCAGGGTCGAGCGAAGGCCTT
GTGTGATGTTCCGATTTTTTGTTGTTTGTTTTGCGTTTTTCGATGTACAT
ATTTTTTCCCTCTCCGTTTTGTTTCGCTAATATTACAGCTATGTTTAGCT
GCTCTATATTTCCCATATGATATGTCTCATTTGCCTTCTGACAATGTGTA
GCGTAAGTGTCAATAACCGCAAACACGATGAAAACACAGAAAGTCCCGAC
CAGAAAGCGTGAAACAACAAAAAATATGAAAACTAGATGCACCTCCTTGT
GCTTGTTCTCCTGGCCCTGCCCCCTCCTCCCGCATTAACCAAGCCCTCCT
CCCCAAACACTTCCGAAGAAGCATCAAATGACAACCCGCATCACCTTATG
TTGTTGTAACTCCGCCTTACCGAAGACCTTTTATTACCGTTTGTTGTAAC
ACCGCCTTACCGAAGACCTGTTGTCATTAGGGATGTTCATCCAATTTCCT
GTTTGTATCAAAACACGTTCCACTAGAATCGCGGCTCTTTGTCGTTTTTC
TTCACCCATCTGCACCCGTACATATTCCCCCCCTGCTTCGTGGAAAATAG
TTTTGTAATAACTTATTGCCTGGTTTCACGTGCTGTGCAATCACACGACG
ATATTTGTCTGGCAGGATCACTCCGTGGGGACTACTGCATCCGGGTGGGA
CGCAACCTCATTCATGGATCGGTGAGTCAATTGTACACACAGCGCTTGCC
CCTTTTGTGGAATATATCTCCGTGCGGTGCAATGGTCTTCTGTTGGGCTT
GCCGCAGTCTTCGTACACAACGAAACCAGATCGTTTTGATGACGACATTT
TATGTCTGTAACCGATCAGGCGAGAAAGCGTTTTGCATCTCCTGCCTCGA
GGCAGCTGAAACTGCAAGGCTAGGTTGATATTGATAGCCCACAGTAACAA
TAGTACTGCTGTATTGGTTTTTGAGACTAGGCCGACCCAGTTTTTGCTTC
TATGCCACATTTACCGCTTTATGATACTGATGCTACCCTTTGACAACGCC
GCCGTGTCGAGTCTCACGCGCGTCGTGTCTGTGATGTGTTTCCTGCACGC
TTTGCCCCTTGAACAGGACGGTGGCGAGAGTGCCCAGCACGAAATTGGAA
TGTGGTTCACCGAGGTGAGCAGGGAAGAAAAAACGCCAGCAAATGTTTTT
GGCGTGATCATACAGGGATGCGAGGGTTTTTATGGACAATCGACTTCGGC
CATGTATAATAATGAGTACCCCCCCCCACCCCCCCGCCTCTTTTTCCTTT
TTACCCCCCCTCTTTTTCCCCCTTTTTTTTCTCCCCTTTTTTTCTTTTCC
CCTTTTTCTTTCATCCCATCCATGAATACCAGTCACTCTTTAGTGTGTTT
GCCCTTCTTCTCCAACTCTGTCCCTTTCGAAACTGAAATCGGGAGTCCCA
TCGCGGGCACCCCCCCCCCGCCCCCTGTCCCTACCGCCGGTGACGGCGAA
AAGCGGCCTGGAAGTTAAAGTAGTACGTGGAACTCCGCGCGTGGGCGTGT
CACTGAACGGATGCCCCGAACTTGAATTATCTCTCGTGAAGAGGGTCGTC
CTTAATTCCGCGAATATATCGACAACGTGGCGTGTTGTCTGTTAAATGTT
GATCGTTATCGACCGAAAAGCAATTTGGTACGATTTCGAGAGTCGATATT
ATGTATACTACCGAAAGAGTATGCTGATTGGCTGAACCTTCAAAATGCAA
GGCACGAACCGTAGTTGGGAGGAAGAAGAGTGCGGTATGTGTCCCCGGAT
CTGCATTACGACTATGTGATACTGGTAGGAGGGAGCGAGAAAAGGACGAA
GAGAATAGATGGTATAAAAAAACATGAACTATACACGTAGTACTACTTAG
TATCATGTTATGTAGTCTACAGCAGTACGTCAACGTTTTCCGTTCGTCAT
CAGCGCAAAAAAGAAAGGAATGTCAGGGGGTGAAGGACCCAACGGGTTCG
ATACGATACATTAAAAGTTGGATGTTTCGACATGACATGGAGGGTAGAAA
ACGTTCGATGCGATATATGGAAAGTTCGATGTTTCGATGTGACATGGAGG
GCAAAACACGTCCGATACGATATACCTGGCATTGAAGTTCGATGTTTCGA
TATGACGTGGAGGGCAAACCACGTTCGATGCGATATGTCGAAAGTTCGAT
GTTTCGATATGACATGGAGAGCAAAACACGTTCGATACGATAATATCGAT
ATTTCGATATATCGAAACTTTGGATACGATATATCGAAAAATCAATATTG
CGATATAAATGAAGGGCAACACATGTTCGATACGATGTATCGAAAAATCT
ACGTTTCGATATGATATATGGAGGGCGAAACGCAATCGACACGACATATC
GAGAGTTTGATATTTCGATATATCGGAACTTTCGATGTGATACGATATAT
CGAAAAATCGATATTTCGATACGATGTGTGTATCAAAAGCTCGATATTTC
GATATGATATACATGTAGATGCGTTCGGGTAAATGATACATCGAAAGTTC
GATGTTATGATGTGGTGTATCAAGAAAATCGACACGATATCCCACACTAA
AACCTTGTCCTCCCCGCCGTTTTGTATACCTGGTGTGGTGTTCCGCCACA
GGCGGAATGCTCCGCGTGGCCGCGTACGCTCGATGCCTGGATCGTGGCGG
ACAACTAGAAAACTAAAGCTTGGCAACAATTTTGTTTTGTTTTGGCCGGG
back to top

Coding sequence (CDS) from alignment at M-pyrifera_M_contig13119:1760..6459+

>mRNA_M-pyrifera_M_contig13119.5852.1 ID=mRNA_M-pyrifera_M_contig13119.5852.1|Name=mRNA_M-pyrifera_M_contig13119.5852.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=696bp|location=Sequence derived from alignment at M-pyrifera_M_contig13119:1760..6459+ (Macrocystis pyrifera P11B4 male)
ATGATCTGGCCCACGAAGGAGATGGCTGCCAACCACTACGCCGATGATCT
GGCCCACGAAGGAGATGGCTGCCAACCACTACGCCGACCTGTCGAAGAAG
CCTTTCTTCGGCGGCCTCGTGGACTACTTCGCCAGTGGCCCCATCGTGGC
CATGGTGTGGGAAGGGCCCGAGGTTATCCTAACCGGCCGTAAGATGCTGG
GCGCCACCAACCCCAACTCTTCTGAGCCAGACCTGTCGAAGAAGCCTTTC
TTCGGCGGCCTCGTGGACTACTTCGCCAGTGGCCCCATCGTGGCCATGGT
GTGGGAAGGGCCCGAGGTTATCCTAACCGGCCGTAAGATGCTGGGCGCCA
CCAACCCCAACTCTTCTGAGCCAGGATCACTCCGTGGGGACTACTGCATC
CGGGTGGGACGCAACCTCATTCATGGATCGGATCACTCCGTGGGGACTAC
TGCATCCGGGTGGGACGCAACCTCATTCATGGATCGGACGGTGGCGAGAG
TGCCCAGCACGAAATTGGAATGTGGTTCACCGAGGACGGTGGCGAGAGTG
CCCAGCACGAAATTGGAATGTGGTTCACCGAGGCGGAATGCTCCGCGTGG
CCGCGTACGCTCGATGCCTGGATCGTGGCGGACAACTAGGCGGAATGCTC
CGCGTGGCCGCGTACGCTCGATGCCTGGATCGTGGCGGACAACTAG
back to top