mRNA_M-pyrifera_M_contig13071.5839.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig13071.5839.1 vs. uniprot
Match: D7G7U8_ECTSI (Thylakoid lumenal 15 kDa protein, chloroplast (P15) n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7U8_ECTSI) HSP 1 Score: 246 bits (627), Expect = 2.460e-79 Identity = 155/204 (75.98%), Postives = 167/204 (81.86%), Query Frame = 1
Query: 1 AMKCAPALLLGVALTTSAPLVDHGVVG-GIVGTAPVFAADDTSKGMASVSDSKLSYGAASTGDKGARKTVTRGVNIENADYHGKDLSGVSFQQSLVRGTNFKGAKLVAAGFFDADLSNCIFDSANLNXXXXXXXXXXXXXXXXXXVTEAYISGATKMEPADIEGADFTDTFLRKDQVKYLCTI--AEGTNPVTGVDTRDSLGCP 603
A +C PA+LLGV LTTSAPL+D ++G +PVFA D KGM+SVSDSKLS GAASTGDKGARKTVTRGVNIENADYH KDLS VSFQQSLVRGTNFK AKLVAAGFFDA XXXXXXXXXXXXXXXXX VTEAY+SGATKMEPA IEGADFTDTFLRKDQV+YLC + A+GTNPV+GVDTRDSLGCP
Sbjct: 45 AARCVPAVLLGVTLTTSAPLLDSPAAHTAVLGASPVFADD---KGMSSVSDSKLSVGAASTGDKGARKTVTRGVNIENADYHDKDLSSVSFQQSLVRGTNFKNAKLVAAGFFDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLVTEAYVSGATKMEPAIIEGADFTDTFLRKDQVRYLCGLETAKGTNPVSGVDTRDSLGCP 245
BLAST of mRNA_M-pyrifera_M_contig13071.5839.1 vs. uniprot
Match: A0A835YUD1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUD1_9STRA) HSP 1 Score: 198 bits (504), Expect = 7.480e-61 Identity = 121/169 (71.60%), Postives = 136/169 (80.47%), Query Frame = 1
Query: 97 APVFAADDTSK-GMASVSDSKLSYGAASTGDKGARKTVTRGVNIENADYHGKDLSGVSFQQSLVRGTNFKGAKLVAAGFFDADLSNCIFDSANLNXXXXXXXXXXXXXXXXXXVTEAYISGATKMEPADIEGADFTDTFLRKDQVKYLCTIAEGTNPVTGVDTRDSLGC 600
AP FA +K G +SVSD+K+ GAAST D G+RK +TRGVN+ENAD+HGKD+SGVSFQQSLVRGTNF +KL+ +GFFDADLSNC XXXXXXXXXXXXXXXXXX Y+SGATK EP DIEGADFTDTFLRKDQ+ YLC IA+GTNPVTGVDT DSL C
Sbjct: 64 APGFAMQPAAKEGASSVSDTKMLSGAASTLDTGSRKIITRGVNLENADFHGKDMSGVSFQQSLVRGTNFASSKLIGSGFFDADLSNCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYVSGATKFEPKDIEGADFTDTFLRKDQIMYLCAIAKGTNPVTGVDTADSLSC 232
BLAST of mRNA_M-pyrifera_M_contig13071.5839.1 vs. uniprot
Match: A0A7S2CVZ3_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CVZ3_9STRA) HSP 1 Score: 139 bits (351), Expect = 4.420e-38 Identity = 98/175 (56.00%), Postives = 118/175 (67.43%), Query Frame = 1
Query: 85 IVGTAPVFAADDTSKGMASVSDSKLSYGAAST--GDKGARKTVTRGVNIENADYHGKDLSGVSFQQSLVRGTNFKGAKLVAAGFFDADLSNCIFDSANLNXXXXXXXXXXXXXXXXXXVTEAYISGATKMEPADIEGADFTDTFLRKDQVKYLCTIAEGTNPVTGVDTRDSLGCP 603
++ P FA D G ++V ++K+ G AST +GARKT+TRGV ++ A++ G+DL+GVSFQQS +RG F+ KL+ A FFDA L XXXXXXXXXXXXXXXXXX GAT + A IEGADFTDTFLRKDQ K LC A+GTNP TGVDTRDSL CP
Sbjct: 36 LLSATPAFAESDG--GASNVENTKIMNGGASTIVNQRGARKTITRGVQLDKANFAGEDLTGVSFQQSQIRGGVFEKTKLLGASFFDATLDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGATSFKDAKIEGADFTDTFLRKDQQKELCATAKGTNPTTGVDTRDSLMCP 208
BLAST of mRNA_M-pyrifera_M_contig13071.5839.1 vs. uniprot
Match: W7U2G1_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U2G1_9STRA) HSP 1 Score: 138 bits (348), Expect = 4.000e-36 Identity = 91/152 (59.87%), Postives = 111/152 (73.03%), Query Frame = 1
Query: 148 DSKLSYGAASTGDKGARKTVTRGVNIENADYHGKDLSGVSFQQSLVRGTNFKGAKLVAAGFFDADLSNCIFDSANLNXXXXXXXXXXXXXXXXXXVTEAYISGATKMEPADIEGADFTDTFLRKDQVKYLCTIAEGTNPVTGVDTRDSLGCP 603
D K+ G+AST + G KT+TRGVNIENA++ GKDL+ VSFQQSLVR NF+GAK ++A FFDADLS XXXXXXXXXXXXXXXXXX Y+SGAT++ IEG+D++ TFLRKDQ YLC A G NP+T + T++SL CP
Sbjct: 171 DFKIKKGSASTLNSGTVKTMTRGVNIENANFEGKDLTTVSFQQSLVRDGNFRGAKCLSASFFDADLSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYVSGATRLTDIQIEGSDWSGTFLRKDQQTYLCKRASGVNPITKISTKESLLCP 322
BLAST of mRNA_M-pyrifera_M_contig13071.5839.1 vs. uniprot
Match: A0A4D9CRG8_9STRA (Rhomboid domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CRG8_9STRA) HSP 1 Score: 134 bits (338), Expect = 1.600e-33 Identity = 91/149 (61.07%), Postives = 109/149 (73.15%), Query Frame = 1
Query: 148 DSKLSYGAASTGDKGARKTVTRGVNIENADYHGKDLSGVSFQQSLVRGTNFKGAKLVAAGFFDADLSNCIFDSANLNXXXXXXXXXXXXXXXXXXVTEAYISGATKMEPADIEGADFTDTFLRKDQVKYLCTIAEGTNPVTGVDTRDSL 594
D K+ G+AST + G KT+TRGVNIENA++ GKDL+ VSFQQSLVR NF+GAK ++A FFDADLS XXXXXXXXXXXXXXXXXX Y+SGAT++ IEG+D++ TFLRKDQ YLC A G NPVT V T++SL
Sbjct: 70 DFKIKRGSASTLNSGTVKTMTRGVNIENANFEGKDLTTVSFQQSLVRDGNFRGAKCLSASFFDADLSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYVSGATRLTDIQIEGSDWSGTFLRKDQQTYLCKRASGVNPVTKVSTKESL 218
BLAST of mRNA_M-pyrifera_M_contig13071.5839.1 vs. uniprot
Match: A0A7S2TUI3_9EUKA (Hypothetical protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2TUI3_9EUKA) HSP 1 Score: 128 bits (322), Expect = 2.890e-33 Identity = 95/181 (52.49%), Postives = 120/181 (66.30%), Query Frame = 1
Query: 73 VVGGIVGTAPVFAADDTSKGMASV-SDSKLSYGAAST-GDKGARKT---VTRGVNIENADYHGKDLSGVSFQQSLVRGTNFKGAKLVAAGFFDADLSNCIFDSANLNXXXXXXXXXXXXXXXXXXVTEAYISGATKMEPADIEGADFTDTFLRKDQVKYLCTIAEGTNPVTGVDTRDSLGC 600
++G +VGT + S+ A++ SDSK++ GAAST GDKG TRGV ++ +D+ GKDLSGVSFQQS+VR TNF FD XXXXXXXXXXXXXXXXX + EAYISG+T + +I+ +D+TDTF+RKDQ++YLC IA GTNP TGV TR+SLGC
Sbjct: 68 LLGALVGTVAAGTSAAMSRAKANLASDSKIAKGAASTSGDKGIAAQSGIATRGVILDYSDFSGKDLSGVSFQQSIVRKTNFXXXXXXXXXXFDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIINEAYISGSTVLRDINIKDSDWTDTFVRKDQLQYLCQIASGTNPTTGVGTRESLGC 248
BLAST of mRNA_M-pyrifera_M_contig13071.5839.1 vs. uniprot
Match: A0A7S0TH33_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0TH33_HEMAN) HSP 1 Score: 127 bits (320), Expect = 5.890e-33 Identity = 86/149 (57.72%), Postives = 102/149 (68.46%), Query Frame = 1
Query: 154 KLSYGAASTGDKGARKTVTRGVNIENADYHGKDLSGVSFQQSLVRGTNFKGAKLVAAGFFDADLSNCIFDSANLNXXXXXXXXXXXXXXXXXXVTEAYISGATKMEPADIEGADFTDTFLRKDQVKYLCTIAEGTNPVTGVDTRDSLGC 600
K+ GAAST D G+R+T+TRG ++N+ + G+ L G+SFQQSL R +FKGA L A XXXXXXXXXXXXXXXXX V EAYI TK++ +IEGADFTDTFLRKDQ +YLC+ A GTNP TGVDT DSL C
Sbjct: 89 KVLQGAASTQDSGSRRTITRGATLDNSRFDGQKLDGISFQQSLCRDCDFKGASLKGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVNEAYILATTKLDGINIEGADFTDTFLRKDQQRYLCSRASGTNPKTGVDTYDSLLC 237
BLAST of mRNA_M-pyrifera_M_contig13071.5839.1 vs. uniprot
Match: A0A7S3Y7I5_9EUKA (Hypothetical protein n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3Y7I5_9EUKA) HSP 1 Score: 127 bits (319), Expect = 7.710e-33 Identity = 95/181 (52.49%), Postives = 121/181 (66.85%), Query Frame = 1
Query: 73 VVGGIVGTAPVFAADDTSKGMASV-SDSKLSYGAAST-GDKGARKT---VTRGVNIENADYHGKDLSGVSFQQSLVRGTNFKGAKLVAAGFFDADLSNCIFDSANLNXXXXXXXXXXXXXXXXXXVTEAYISGATKMEPADIEGADFTDTFLRKDQVKYLCTIAEGTNPVTGVDTRDSLGC 600
++G ++G A AA + + A++ SDSK++ GAAST GDKG TRGV ++ +D+ GKDLSGVSFQQS+VR TNF FD XXXXXXXXXXXXXXXXX + EAYISG+T + +I+ +D+TDTF+RKDQ++YLC IA GTNP TGV TR+SLGC
Sbjct: 66 LLGALMGVAASTAAMNMNGARANLASDSKIAKGAASTSGDKGIAAQSGIATRGVILDYSDFSGKDLSGVSFQQSIVRKTNFXXXXXXXXXXFDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIINEAYISGSTVLRDINIKDSDWTDTFVRKDQLQYLCQIASGTNPTTGVGTRESLGC 246
BLAST of mRNA_M-pyrifera_M_contig13071.5839.1 vs. uniprot
Match: A0A8J2SU33_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SU33_9STRA) HSP 1 Score: 121 bits (304), Expect = 4.930e-31 Identity = 85/168 (50.60%), Postives = 110/168 (65.48%), Query Frame = 1
Query: 100 PVFAADDTSKGMASVSDSKLSYGAASTGDKGARKTVTRGVNIENADYHGKDLSGVSFQQSLVRGTNFKGAKLVAAGFFDADLSNCIFDSANLNXXXXXXXXXXXXXXXXXXVTEAYISGATKMEPADIEGADFTDTFLRKDQVKYLCTIAEGTNPVTGVDTRDSLGCP 603
P A D + G +K++ G AST G +TRGVN+++ D+ GKDL GV+FQQS++R NF+G L +A FFDA + F+ AN+ XXXXXXXXXXXXXXXXX +AY++GA + I+ D+TD +RKDQ LC IA G NP TGVDTR+SL CP
Sbjct: 43 PAHAVD--ASGQVQKGAAKIAGGGASTLQSGRVIAITRGVNLDDTDWTGKDLKGVAFQQSVLRNCNFRGVNLFSASFFDAXXAXSKFNDANMKLXXXXXXXXXXXXXXXXXXXQAYMAGAVIKDLKLIDDTDWTDVDMRKDQRSALCAIAAGKNPRTGVDTRESLMCP 208
BLAST of mRNA_M-pyrifera_M_contig13071.5839.1 vs. uniprot
Match: A0A7S1QSD0_ALECA (Hypothetical protein n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1QSD0_ALECA) HSP 1 Score: 121 bits (303), Expect = 1.600e-30 Identity = 67/152 (44.08%), Postives = 82/152 (53.95%), Query Frame = 1
Query: 151 SKLSYGAASTG-DKGARKTVTRGVNIENADYHGKDLSGVSFQQSLVRGTNFKGAKLVAAGFFDADLSNCIFDSANLNXXXXXXXXXXXXXXXXXXVTEAYISGATKMEPADIEGADFTDTFLRKDQVKYLCTIAEGTNPVTGVDTRDSLGCP 603
SK+ G AST G RK +TRG+N+E A+Y G+DLSGVSFQQS+VR + T+ Y++G T+MEP I+GADFT T RKDQ+ YLC IAEGTNPVT VDTR+SL CP
Sbjct: 89 SKIKAGGASTSAGLGTRKIITRGINLEKANYAGQDLSGVSFQQSIVREXXXXXXXXXXXXXXXXXXXXXXXXXXXMTQANLELARATDAIFTNAIATDMYVNGTTRMEPKRIDGADFTGTIFRKDQLNYLCKIAEGTNPVTKVDTRESLMCP 240 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig13071.5839.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig13071.5839.1 >prot_M-pyrifera_M_contig13071.5839.1 ID=prot_M-pyrifera_M_contig13071.5839.1|Name=mRNA_M-pyrifera_M_contig13071.5839.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=201bp MKCAPALLLGVALTTSAPLVDHGVVGGIVGTAPVFAADDTSKGMASVSDSback to top mRNA from alignment at M-pyrifera_M_contig13071:638..5096+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig13071.5839.1 ID=mRNA_M-pyrifera_M_contig13071.5839.1|Name=mRNA_M-pyrifera_M_contig13071.5839.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=4459bp|location=Sequence derived from alignment at M-pyrifera_M_contig13071:638..5096+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig13071:638..5096+ >mRNA_M-pyrifera_M_contig13071.5839.1 ID=mRNA_M-pyrifera_M_contig13071.5839.1|Name=mRNA_M-pyrifera_M_contig13071.5839.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1206bp|location=Sequence derived from alignment at M-pyrifera_M_contig13071:638..5096+ (Macrocystis pyrifera P11B4 male)back to top |