mRNA_M-pyrifera_M_contig13046.5826.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig13046.5826.1
Unique NamemRNA_M-pyrifera_M_contig13046.5826.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig13046.5826.1 vs. uniprot
Match: D7FRA5_ECTSI (Kynurenine 3-Monooxygenase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRA5_ECTSI)

HSP 1 Score: 343 bits (881), Expect = 8.320e-114
Identity = 165/258 (63.95%), Postives = 204/258 (79.07%), Query Frame = 1
Query:    1 QAGDLVIRLKGSYRHHKKKKNSESFVGAKSICRGDLAKSLLQVTRKRPNINVYFGCSFTNMNADNRRERAVRSVLATFERASGGSIDCDYDMLVGADGVNSRVREALKEHVPDFTVRQEEDPMTFKTILVPIMEMEEAEENWKSCFHVINTKIGCLLAPPRSDGMLTATVILPGEGPNTFEALMKTTQDVKDFFATHYPVCFGPEGPSEEVAKAFLDQRPQHLQSTYCSRLVHEDIVLLGDAAHSMWASLGQGVNAAL 774
            +AG+ ++ L GS RHHKK+K S+ F+ + SICRGD AK+LL    K PN+NV+FGC+F+ ++ + R        +ATFER +G  ++ +YDML+GADGVNSRVR+ L+E+VPDFTVRQ EDPM FKTIL+PIM ME A+E WK  FHV N+ IGC++APPRSDGMLTATV+LP EG  +F+ALMKTTQDV+DFF  +YP  FG EGPSEEVAK FL++R Q L+STYCSRL H  I L+GDAAHSMWASLGQGVNAAL
Sbjct:   80 EAGERLLTLAGSLRHHKKEKTSKFFLDSLSICRGDFAKALLNKASKVPNVNVHFGCTFSKVDMEQR--------VATFERGNGDVVESEYDMLIGADGVNSRVRKELEENVPDFTVRQREDPMAFKTILIPIMNMEGADEGWKKRFHVTNSDIGCIIAPPRSDGMLTATVVLPSEGKTSFDALMKTTQDVRDFFGHYYPSAFGHEGPSEEVAKEFLERRTQQLRSTYCSRLAHGSIFLIGDAAHSMWASLGQGVNAAL 329          
BLAST of mRNA_M-pyrifera_M_contig13046.5826.1 vs. uniprot
Match: D8LSX9_ECTSI (Kynurenine 3-Monooxygenase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSX9_ECTSI)

HSP 1 Score: 192 bits (489), Expect = 1.380e-58
Identity = 94/148 (63.51%), Postives = 112/148 (75.68%), Query Frame = 1
Query:  214 RSVLATFERASGGSIDCDYDMLVGADGVNSRVREALKEHVPDFTVRQEEDPMTFKTILVPIMEMEEAEENWKSCFHVINTKIGCLLAPPRSDGMLTATVILPGEGPNTFEALMKTTQDVKDFFATHYPVCFGPEGPSEEVAKAFLDQR 657
            R  +A FER +G  ++  YDMLVGADGVNSRVR++L+E VPDFTVRQ ED M FKTI +PIM MEEA+E+WK  FHVIN+++GC+ A PR  G LTA VILP  G  +F ALMKTTQDV+ FF  HYP  FG EGPS EVAK F ++R
Sbjct:   11 RGRVAIFERGNGDVVEVGYDMLVGADGVNSRVRKSLEESVPDFTVRQREDHMAFKTIEIPIMGMEEADESWKERFHVINSEVGCIGAAPRPGGKLTAVVILPSSGKTSFGALMKTTQDVRGFFGRHYPSAFGGEGPSVEVAKDFHERR 158          
BLAST of mRNA_M-pyrifera_M_contig13046.5826.1 vs. uniprot
Match: A0A0V7ZJA7_9CYAN (Uncharacterized protein n=1 Tax=Mastigocoleus testarum BC008 TaxID=371196 RepID=A0A0V7ZJA7_9CYAN)

HSP 1 Score: 137 bits (346), Expect = 3.600e-34
Identity = 98/262 (37.40%), Postives = 145/262 (55.34%), Query Frame = 1
Query:   10 DLVIRLKGSYRHHKKK-KNSESFVGAKSICRGDLAKSLLQVTRKR--PNINVYFGCSFTNMNADNRRERAVRSVLATFERASGGSIDCDYDMLVGADGVNSRVREALKEHVPDFTVRQEEDPMTFKTI-LVPIMEMEEAEENWKSCFHVINT-KIGCLLAPPRSDGMLTATVILPGEGPNTFEALMKTTQDVKDFFATHYPVCFGPEGPSEEVAKAFLDQRPQHLQ-STYCSRLVHED-IVLLGDAAHSMWASLGQGVNAAL 774
            DL + L G+ RH  K  + ++ F  A S+ R  LAK L Q  R R   +I  YFG    +++ + +        LATF + +   I+ ++D+LVGADGV S VR  ++++   F+ +Q  D M FK   L  + E+ +A+  W  CFH   + +   +LAPP SDG L   +I+P EG  TF+ L KT  +++  F   +P     +   E+ AK  L+Q+P +   +T CS L   D +VL+GDA HS+WASLGQG N AL
Sbjct:   91 DLSVTLAGNVRHTNKGIRFNQPFNKAISVNRNVLAKQLFQEGRCRFPEHIEYYFGYRLESIDFEQK--------LATFHKEND-CIERNFDLLVGADGVFSTVRVLMEKYFDGFSCQQNFDKMMFKVCPLGKVTELPDAQPQWDKCFHTWPSHEPVTILAPPSSDGSLNGILIMPPEGEFTFDKL-KTEAELEALFQEKFPDILAGKSLPEDWAKYLLEQKPSYGGITTICSSLHGGDCVVLVGDAGHSVWASLGQGCNVAL 342          
BLAST of mRNA_M-pyrifera_M_contig13046.5826.1 vs. uniprot
Match: A0A3C1RTQ1_9CYAN (FAD-dependent monooxygenase n=3 Tax=unclassified Planktothrix TaxID=2648599 RepID=A0A3C1RTQ1_9CYAN)

HSP 1 Score: 129 bits (323), Expect = 5.930e-31
Identity = 94/257 (36.58%), Postives = 130/257 (50.58%), Query Frame = 1
Query:   25 LKGSYRHHKK-KKNSESFVGAKSICRGDLAKSLLQ--VTRKRPNINVYFGCSFTNMNADNRRERAVRSVLATFERASGGSIDCDYDMLVGADGVNSRVREALKEHVPDFTVRQEEDPMTFKTI-LVPIMEMEEAEENWKSCFHVI-NTKIGCLLAPPRSDGMLTATVILPGEGPNTFEALMKTTQDVKDFFATHYPVCF-GPEGPSEEVAKAFLDQRPQHLQSTYCSRL-VHEDIVLLGDAAHSMWASLGQGVNAAL 774
            LKG+ RH  K  K S  F  A S+ R  LA+ LL+  +TR   +I  YF      +N + +        LATF+      +   +D+LVGADGV S VRE + +   +F+  Q  D MTFK   L        +  +W+ CFH   NT+   +LAPP  DG LT  +ILP +   TF+ + KT  D+   F+  +P  F G   P + V      +      +T C+       +VL+GDAAHS+WASLGQG N AL
Sbjct:   87 LKGNVRHSTKGAKKSPGFSEAVSVNRNILAQHLLKEGITRFPEHIKYYFNHRLEGINFEQK--------LATFQ-IEEKQVSQSFDLLVGADGVFSTVREIIVQQFDEFSADQNHDQMTFKICQLGKATNFTNSTPDWEECFHTWPNTQPVTMLAPPNPDGTLTGVLILPQQSEITFDKI-KTENDINALFSAKFPDIFMGKPIPQDWVEDLLAQKVSLGGITTICNHFHAGNSVVLVGDAAHSVWASLGQGCNVAL 333          
BLAST of mRNA_M-pyrifera_M_contig13046.5826.1 vs. uniprot
Match: UPI001BAE8264 (FAD-dependent monooxygenase n=2 Tax=Acaryochloris TaxID=155977 RepID=UPI001BAE8264)

HSP 1 Score: 125 bits (314), Expect = 1.250e-29
Identity = 94/265 (35.47%), Postives = 138/265 (52.08%), Query Frame = 1
Query:   19 IRLKGSYRHHKK----KKNSESFVGAKSICRGDLAKSLLQVTRKR--PNINVYFGCSFTNMNADNRRERAVRSVLATFERASGGSIDCDYDMLVGADGVNSRVREALKEHVPDFTVRQEEDPMTFKTILVPIME-MEEAEENWKSCFHVI-NTKIGCLLAPPRSDGMLTATVILPGEGPNTFEALMKTTQDVKDFFATHYPVCF---GPEGPSEEVAKAFLDQRPQHLQ-STYCSRLVHED-IVLLGDAAHSMWASLGQGVNAAL 774
            + ++G+ RH +K    +K S + V   S+ R  LA+SL+   + R   NI  YF  +   +N        ++   A F+ ASG   +  +D+LVGADG++S VR ++   +  F VRQ  D M +K   + + E +  A   W   FHV    +   + APP +DG + A +ILP EG  TF+ + +T  D+   F    PV F      G   + A+  L Q+  H   +T C+R    D +VLLGDAAHS+W SLGQG NAAL
Sbjct:   85 VYIQGNIRHTEKDSTLRKGSRNSV---SVDRHTLAQSLITEGKNRFPDNIQYYFDQTLLQLN--------IQDKSALFQEASGQHEE-KFDLLVGADGISSTVRHSMSSQLQGFEVRQHADNMMYKICNLGLAENLPGATAGWADAFHVWPGAEPVTMAAPPSADGFIRAVLILPQEGEITFDTI-QTEADISALFKAKLPVVFHNLDQTGLPPDFAQDLLSQKAAHGGFTTLCNRFEDGDSVVLLGDAAHSIWPSLGQGCNAAL 336          
BLAST of mRNA_M-pyrifera_M_contig13046.5826.1 vs. uniprot
Match: B0C034_ACAM1 (FAD_binding_3 domain-containing protein n=1 Tax=Acaryochloris marina (strain MBIC 11017) TaxID=329726 RepID=B0C034_ACAM1)

HSP 1 Score: 122 bits (307), Expect = 1.210e-28
Identity = 92/265 (34.72%), Postives = 135/265 (50.94%), Query Frame = 1
Query:   10 DLVIRLKGSYRHHKKKKN-SESFVGAKSICRGDLAKSLLQVTRKR--PNINVYFGCSFTNMNADNRRERAVRSVLATFERASGGSIDCDYDMLVGADGVNSRVREALKEHVPDFTVRQEEDPMTFKTILVPIME-MEEAEENWKSCFHVI-NTKIGCLLAPPRSDGMLTATVILPGEGPNTFEALMKTTQDVKDFFATHYPVCF---GPEGPSEEVAKAFLDQRPQHLQ-STYCSRLVHED-IVLLGDAAHSMWASLGQGVNAAL 774
            D  + + G+ RH +K     + F  + S+ R  LA+SL+   + R   NI  YF  +   +N  ++         A F+ ASG   +  +D+L+GADG++S VR ++   +  FTVRQ  D M +K   + + E +  A   W   FHV    +   + APP +DG++ A +ILP EG  TF+ + +T  DV   F    PV F      G      +  L Q+  H   +T C+R    D +VLLGDAAHS+W SLGQG N AL
Sbjct:   82 DKQVCITGNIRHTEKDSILRKGFRTSVSVDRHTLAQSLIAEGKNRFPDNIQYYFEQTLLQLNLHDK--------TALFQEASGQH-EQTFDLLIGADGISSTVRYSMSSQLEGFTVRQHADDMMYKICNLGLAEHLPGATAEWADAFHVWPGAEPVTMAAPPSADGVIRAVLILPQEGEITFDTI-RTEADVSALFKAKLPVVFPNLDQTGFPSHFVQDLLSQKAAHGGFTTMCNRFEDGDCVVLLGDAAHSIWPSLGQGCNVAL 336          
BLAST of mRNA_M-pyrifera_M_contig13046.5826.1 vs. uniprot
Match: A0A6P0S6X8_9CYAN (FAD-dependent monooxygenase n=4 Tax=unclassified Symploca TaxID=2620434 RepID=A0A6P0S6X8_9CYAN)

HSP 1 Score: 118 bits (295), Expect = 5.710e-27
Identity = 93/261 (35.63%), Postives = 138/261 (52.87%), Query Frame = 1
Query:   25 LKGSYRHHKKKKN-SESFVGAKSICRGDLAKSLLQVTRKR--PNINVYFGCSFTNMNADNRRERAVRSVLATFERASGGSIDCDYDMLVGADGVNSRVREALKEHVPDFTVRQEEDPMTFKTILVPIM-EMEEAEENWKSCFHVI-NTKIGCLLAPPRSDGMLTATVILPGEGPNTFEALMKTTQDVKDFFATHYPVCFGPE----GPSEEVAKAFLDQRPQHLQ-STYCSRLVHED-IVLLGDAAHSMWASLGQGVNAAL 774
            L+G+ RH  K    S+ F  + SI R  LA+SL++  + R    I  +F  +   +N        ++  +A F +   G    ++ +L+GADGV S VR A++  +  F V+Q  D M FK   + +  ++  A E W SCFH   + +   LLAPP++DG L   +ILP EG  T+E + +T + V + FA  +P  F PE    G     A+  L Q+  +   +T C+     D +VLLGDAAHS+W SLGQG N AL
Sbjct:   87 LQGNVRHTAKGTTLSKGFANSVSIDRYTLAQSLIEEGKHRFPHKIQYHFQQTLHQVN--------LKEKIALF-KGELGEHQQEFHLLIGADGVFSTVRSAMEAQIQGFQVQQNRDNMMFKICQLGLAKDLPGATETWTSCFHTWPSVQPITLLAPPKTDGSLNGVLILPQEGEITYEQI-QTEEAVAELFAKKFPDIF-PELDQKGLPSGFAQDLLGQKAAYGGVTTICTGFEGGDGVVLLGDAAHSVWPSLGQGCNVAL 336          
BLAST of mRNA_M-pyrifera_M_contig13046.5826.1 vs. uniprot
Match: K8EGY7_9CHLO (Uncharacterized protein n=1 Tax=Bathycoccus prasinos TaxID=41875 RepID=K8EGY7_9CHLO)

HSP 1 Score: 119 bits (297), Expect = 8.030e-27
Identity = 87/262 (33.21%), Postives = 133/262 (50.76%), Query Frame = 1
Query:   58 KNSESFVGAKSICRGDLAKSLLQVTRKRPNINVYFGCSFTNMNADNRRERAVRSVLATFERASGG------SIDCD------YDMLVGADGVNSRVREALKE-HVPDFTVRQEEDPMTFKTILVPIMEM---EEAEENWKSCFHVINTKIGCLLAPPRSDGMLTATVILPG----EGPNTFEALMKTTQDVKDFFATHYPVCFGPEGPSEEVAKAFLDQRPQHLQST-YCSRLV--HEDIVLLGDAAHSMWASLGQGVNAAL 774
            +++ +F G+ SI R  LA  + +   +R    + F  +   ++        ++S    FER  G       S D D      YD+LVGADGVNS VR A++  H   FTV++  D M +K++ +P++     EEA E WK  FH     +  LLAPP  DG L+  VILP     +        +   Q+V+  F   +P  FG   P + ++ +  +Q+P +  +T +CS L     ++VL+GDA H++W SLGQG N AL
Sbjct:  199 RSTNAFSGSISINRSVLAAEIQKAAIERYPTQITFHYNKQILDVPGGTSIDLKSKKVVFERFEGEDTCPFLSEDEDPNETRRYDLLVGADGVNSEVRRAMEIFHDQTFTVKKHVDGMQYKSVTLPVIGGWIGEEAAEKWKKSFHTWPRGLNSLLAPPNPDGTLSGVVILPSLAISKNAKWSWDNITAPQEVQKMFTELFPNAFGGMLPPQ-ISTSLANQKPANGGTTLFCSHLAMPESNVVLVGDAGHAVWPSLGQGANVAL 459          
BLAST of mRNA_M-pyrifera_M_contig13046.5826.1 vs. uniprot
Match: C1N4J9_MICPC (Predicted protein n=1 Tax=Micromonas pusilla (strain CCMP1545) TaxID=564608 RepID=C1N4J9_MICPC)

HSP 1 Score: 114 bits (286), Expect = 1.030e-26
Identity = 96/266 (36.09%), Postives = 122/266 (45.86%), Query Frame = 1
Query:   73 FVGAKSICRGDLAKSLLQVTRKRPNINVYFGCSFTNMNADNRRERAVRSVLATFERASGGSIDCD----YDMLVGADGVNSRVREALKEHVPDFTVRQEEDPMTFKTILVPIMEME--------EAEENWKSCFHVINTKIGCLLAPPRSDGMLTATVILPG------EGPN--TFEALMKTTQDVKDFFATHYPVCFG-----------PEGPSEEVAKAFLDQR--PQHLQSTYCSRLVHEDIV-LLGDAAHSMWASLGQGVNA 768
            F G  SI R  LA ++      +   +V        ++A +   R V   LA  E +   S+  +    YD+LV ADGVNSRVR  L E   D  V Q  D M FKTI +P             +    W+ CFH     +  LLAPP  +G LTATVILPG       G +  TF+ +  T +D   FFA  +P  FG           P  P EE  + F   R  P  + +T  S    +  V L+GDAAHSMW SLGQG NA
Sbjct:    2 FKGTVSIDRNALADAIAASAEAKHGADVVAFARGVGVDAIDFDARVV--TLAAKEASDPASVSYEQLVSYDLLVAADGVNSRVRSLL-EAAGDVVVDQHSDEMLFKTIRLPAQTPPNYPHDGTVKVAATWRKCFHTWPRGLMSLLAPPCPNGSLTATVILPGGVHAANAGSDVWTFDKI-STAEDAARFFAETFPDAFGRDVDAMTGAVSPTRPPEEELERFASARANPGGVTTTISSLAARDGTVALIGDAAHSMWPSLGQGCNA 263          
BLAST of mRNA_M-pyrifera_M_contig13046.5826.1 vs. uniprot
Match: B0C0P2_ACAM1 (Kynurenine 3-monooxygenase, putative n=3 Tax=Acaryochloris TaxID=155977 RepID=B0C0P2_ACAM1)

HSP 1 Score: 110 bits (276), Expect = 2.710e-24
Identity = 88/260 (33.85%), Postives = 132/260 (50.77%), Query Frame = 1
Query:   25 LKGSYRHHKKKKN-SESFVGAKSICRGDLAKSLLQVTRKR--PNINVYFGCSFTNMNADNRRERAVRSVLATFERASGGSIDCDYDMLVGADGVNSRVREALKEHVPDFTVRQEEDPMTFKTILVPIME-MEEAEENWKSCFHVI-NTKIGCLLAPPRSDGMLTATVILPGEGPNTFEALMKTTQDVKDFFATHYPVCFG---PEGPSEEVAKAFLDQRPQHLQ-STYCSRLVHED-IVLLGDAAHSMWASLGQGVNAAL 774
            L+G+ RH  K  N  + F  A S+ R  LA+ L++  + R   NI  +F  +   +N  ++         A F+     +    +D+L+GADGV S VR +++  +  F V+Q +D M +K   +   + +  AEE W   FH   N +   LLAPP +DG L   +ILP  G  T+E L ++  D+   F   +P  F      G   + A+  L Q+  H   +T C++    D +VLLGDAAHS+W SLGQG N AL
Sbjct:   95 LQGNVRHTAKGANLGKGFQDAVSVDRTTLAQCLIEEGQHRFPENIQYHFEQTLLQVNFQDK--------TALFQGKQDQNQQT-FDLLIGADGVYSTVRTSMESQIQGFEVQQNQDNMMYKICDLGFAKNLPGAEEKWAESFHTWPNAQPLTLLAPPSTDGSLKGVLILPQVGDITYETL-QSEADILALFQEKFPDVFPNLEQTGLPSQFAQDLLSQKAAHGGITTQCNQFEGGDCVVLLGDAAHSVWPSLGQGCNVAL 344          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig13046.5826.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FRA5_ECTSI8.320e-11463.95Kynurenine 3-Monooxygenase n=1 Tax=Ectocarpus sili... [more]
D8LSX9_ECTSI1.380e-5863.51Kynurenine 3-Monooxygenase n=1 Tax=Ectocarpus sili... [more]
A0A0V7ZJA7_9CYAN3.600e-3437.40Uncharacterized protein n=1 Tax=Mastigocoleus test... [more]
A0A3C1RTQ1_9CYAN5.930e-3136.58FAD-dependent monooxygenase n=3 Tax=unclassified P... [more]
UPI001BAE82641.250e-2935.47FAD-dependent monooxygenase n=2 Tax=Acaryochloris ... [more]
B0C034_ACAM11.210e-2834.72FAD_binding_3 domain-containing protein n=1 Tax=Ac... [more]
A0A6P0S6X8_9CYAN5.710e-2735.63FAD-dependent monooxygenase n=4 Tax=unclassified S... [more]
K8EGY7_9CHLO8.030e-2733.21Uncharacterized protein n=1 Tax=Bathycoccus prasin... [more]
C1N4J9_MICPC1.030e-2636.09Predicted protein n=1 Tax=Micromonas pusilla (stra... [more]
B0C0P2_ACAM12.710e-2433.85Kynurenine 3-monooxygenase, putative n=3 Tax=Acary... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig13046contigM-pyrifera_M_contig13046:5890..8708 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score345.1
Seed ortholog evalue2.8e-92
Seed eggNOG ortholog2880.D7FRA5
KEGG rclassRC00046
KEGG koko:K00486
KEGG ReactionR01960
KEGG Pathwayko00380,ko01100,map00380,map01100
KEGG ModuleM00038
Hectar predicted targeting categoryother localisation
EggNOG free text desc.FAD binding
EggNOG OGsCOG0654@1,KOG2614@2759
EC1.14.13.9
COG Functional cat.CH
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Exons5
Model size783
Cds size783
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig13046.5826.1prot_M-pyrifera_M_contig13046.5826.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig13046 5890..8708 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815805.9016302-CDS-M-pyrifera_M_contig13046:5889..61121622815805.9016302-CDS-M-pyrifera_M_contig13046:5889..6112Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig13046 5890..6112 +
1692277578.8132298-CDS-M-pyrifera_M_contig13046:5889..61121692277578.8132298-CDS-M-pyrifera_M_contig13046:5889..6112Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig13046 5890..6112 +
1622815805.9211054-CDS-M-pyrifera_M_contig13046:6411..65481622815805.9211054-CDS-M-pyrifera_M_contig13046:6411..6548Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig13046 6412..6548 +
1692277578.825099-CDS-M-pyrifera_M_contig13046:6411..65481692277578.825099-CDS-M-pyrifera_M_contig13046:6411..6548Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig13046 6412..6548 +
1622815805.937346-CDS-M-pyrifera_M_contig13046:7060..71871622815805.937346-CDS-M-pyrifera_M_contig13046:7060..7187Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig13046 7061..7187 +
1692277578.8325903-CDS-M-pyrifera_M_contig13046:7060..71871692277578.8325903-CDS-M-pyrifera_M_contig13046:7060..7187Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig13046 7061..7187 +
1622815805.948727-CDS-M-pyrifera_M_contig13046:7481..76501622815805.948727-CDS-M-pyrifera_M_contig13046:7481..7650Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig13046 7482..7650 +
1692277578.8403015-CDS-M-pyrifera_M_contig13046:7481..76501692277578.8403015-CDS-M-pyrifera_M_contig13046:7481..7650Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig13046 7482..7650 +
1622815805.9644003-CDS-M-pyrifera_M_contig13046:8581..87081622815805.9644003-CDS-M-pyrifera_M_contig13046:8581..8708Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig13046 8582..8708 +
1692277578.848215-CDS-M-pyrifera_M_contig13046:8581..87081692277578.848215-CDS-M-pyrifera_M_contig13046:8581..8708Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig13046 8582..8708 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig13046.5826.1

>prot_M-pyrifera_M_contig13046.5826.1 ID=prot_M-pyrifera_M_contig13046.5826.1|Name=mRNA_M-pyrifera_M_contig13046.5826.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=261bp
QAGDLVIRLKGSYRHHKKKKNSESFVGAKSICRGDLAKSLLQVTRKRPNI
NVYFGCSFTNMNADNRRERAVRSVLATFERASGGSIDCDYDMLVGADGVN
SRVREALKEHVPDFTVRQEEDPMTFKTILVPIMEMEEAEENWKSCFHVIN
TKIGCLLAPPRSDGMLTATVILPGEGPNTFEALMKTTQDVKDFFATHYPV
CFGPEGPSEEVAKAFLDQRPQHLQSTYCSRLVHEDIVLLGDAAHSMWASL
GQGVNAALGE*
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mRNA from alignment at M-pyrifera_M_contig13046:5890..8708+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig13046.5826.1 ID=mRNA_M-pyrifera_M_contig13046.5826.1|Name=mRNA_M-pyrifera_M_contig13046.5826.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=2819bp|location=Sequence derived from alignment at M-pyrifera_M_contig13046:5890..8708+ (Macrocystis pyrifera P11B4 male)
CAGGCTGGCGATCTCGTCATAAGGCTGAAGGGTTCCTACCGCCACCACAA GAAAAAGAAGAATAGCGAATCATTCGTGGGAGCAAAAAGCATCTGCCGCG GAGATCTGGCGAAATCTCTGCTGCAAGTGACCAGGAAGCGGCCGAATATC AACGTCTATTTCGGCTGCTCCTTCACGAACATGAACGCCGATAACAGGCG AGAGCGGGCTGTGCGGAGCGTGCGTGTTATTACAGTAGCTCAGCCTTGGG CTATGTGTGTAGTCTGCTTTTGACGCCATTTTTACTAGCTTCCAATATAT TGCTTGCACTCGTCGACCACAATCGTGTTTTCGTTCTCAGAATTTTCTCG CGTCACCGCACAAGGAAGTCGTGCAAGGCACCAGGTCAAGCTATAAACCT TGGGCTACGTTTACACGTTGTCTTCTTTTCGTTTTTGGTGAGTCGGTCTT GGTCGCCGAGACAGAGCACCGCCCTGAAGGCTGATCCTTTCTCACGCCTT TCCCCACCGCGGCGAAGCAGAGTTGCAACTTTCGAGCGCGCAAGCGGGGG CAGCATCGACTGCGACTATGACATGCTTGTGGGCGCAGATGGGGTCAACA GCCGTGTCCGCGAAGCTCTCAAGGAGCATGTTCCCGACTTCACCGTCAGA CAGGAAGAGGTGTGCAAAACGCTACGGTCGCAGCCTCCGAAGAATATCAT AAATTTGTGTGCCCTGCTCATGGTCGCCGCTTTCGAAAATCCAATATTTA CTGTCGATTTTAATGTTGAAAACACTCGTGCATCGGAAATGGGGAGCGGT TGTCTGTACGTACATGTAATAGCTTGTTGACGAAAACGTATGAACAAAAC AGGTATCCGAGAAAACGTATTTCTGTCACCCGACGTTGATGTTGACGTTG ACGTTGACATTGACGATGGTATTGACGTTGGCATTGTCGTTGACGTTGGC TCTGACAGTGACGTTGACGTTGACGTTGAAAATGACGCTGAGGTTGGTAA TGGTGTTAGCATGGGCGTTGATGCTGACGTTGATGTGGACGTGGACGTTG ACGACTACTTCGGCGTTAACATCGATGGCGTTAACATCGATGTTGACGAT GATATTGGCGTTAACAATGGCGTTGACATTGACATTAACGATATAATTGA CGTTGATGTTGACGTTGGCAGGATCCCATGACGTTCAAGACCATCTTAGT TCCCATCATGGAAATGGAGGAAGCAGAAGAGAACTGGAAGTCGTGTTTCC ACGTTATTAATACGAAAATCGGGTGCCTTCTTGCCCCCCCCCGGTCAGGT GTGTTTTGCGCACCATCTTCTGCAGCATTGCAGAATCCAAGAGTTGCTTC CAAACGTAGTAGACCTCGTTCGCTACGGACTCCAACAAGAACATAGTCCG CAGTATGTAGAGACCTACGAAGGAAGGAAACCCCGTCCACATTCTGGTGA CATCCGTTGTGTGTGTGTGTTTTTTTTTCTTGCACGTTTTGCGCTGTGTA CTATGATATACATGGTACTGCTGCGGCTCCGGGACGTTTTTTTTTTCTTC TCCGACGAGCAATTTTTTGCTGTGCTCGATGTCCTCTCCCAGATGGGATG TTGACGGCCACGGTCATTCTGCCTGGCGAAGGCCCAAATACGTTCGAGGC GCTCATGAAGACGACGCAGGATGTGAAGGATTTCTTCGCCACGCATTACC CCGTCTGCTTCGGGCCCGAAGGACCGAGCGAGGAGGTCGCAAAAGCCTTC CTTGACCAACGGTGAGCAATAAACGGGTTGTGCAAGCAGCTCTTTAGCTG GAAAACAGCGGGAGTGATATTTTTTGTTTCCTCGAGCAAAGGCGAGTTTC TCATGTACACCGCGCCAAAAAGTAGGGACCCCGTTGAGCTGGCTGAAGCG CCGATTCTACGACTGCCGACCGAGATTGTCGAACAAAGAAAGCTTAGTGG AGGATTGATGACTTTTTGTTCGACCAATCGCGACATATTGATACCGACAT CTCACTCCTACCAACGAACACAAGTTGACGGCAGTCACAAATATCCCGCT GCGCGAGTTGTAGCGAAAGCGGCACGAAAGCGGCACTATCTTATTTCTAC TACTGTAGAGTGTACAGTAGTACCGGTACATTTTATTGGATGCTGGTGTC GCTACGAGTCAGCAGTTTTTACCCCTTGGCCCGGTTTGGAACACCGTGTC GGTAATTGCACACAACTCTCCATCCGATAACTTAAACGACCCCAAGCTCA GGTCTCCTCAGCCCCAGAAAGAACAGGCTAACCACGCCCACCTGCCGAGC CGCTAGACGTGATACCTCCCCGCGCAGATCTACCACGCGAAGAGTCACCG CGCGTACTTGGGTTACCACGAATTCGGCGCCGTAGACGACGGTTTAGGCC TCGTTAACCCCCAGGCACTTGTGTAGGACGGTTCGTGGTCGGGTCGCGAG CATAGCAACGGAAAGCCGTGAATGGGGGATAAAGCCGCGGCTGCCTGGCT TGTCTACTCAACGGTCAACCCGCAAAAGCTATTCAGGATAAACGTAGTTC CCCAGAGGCCGGTCAAACTCGCCATTTTACATTTCATGTTCTCCTGTTCC GTCTCAAAAAGGATGCGTGGTCGATGGTCAAATGACTTAGGCAAGCAACG AATGAGTACCCCTCCCCTGTACCGCCCCGCCCCCCTGCCCAGGCCCCAAC ACCTCCAGTCCACGTACTGCTCGCGATTGGTACACGAAGATATCGTCCTC CTCGGTGATGCGGCACACTCCATGTGGGCATCTCTTGGCCAGGGGGTTAA CGCGGCGTTAGGTGAGTAG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig13046:5890..8708+

>mRNA_M-pyrifera_M_contig13046.5826.1 ID=mRNA_M-pyrifera_M_contig13046.5826.1|Name=mRNA_M-pyrifera_M_contig13046.5826.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1566bp|location=Sequence derived from alignment at M-pyrifera_M_contig13046:5890..8708+ (Macrocystis pyrifera P11B4 male)
CAGGCTGGCGATCTCGTCATAAGGCTGAAGGGTTCCTACCGCCACCACAA
GAAAAAGAAGAATAGCGAATCATTCGTGGGAGCAAAAAGCATCTGCCGCG
GAGATCTGGCGAAATCTCTGCTGCAAGTGACCAGGAAGCGGCCGAATATC
AACGTCTATTTCGGCTGCTCCTTCACGAACATGAACGCCGATAACAGGCG
AGAGCGGGCTGTGCGGAGCGTGCCAGGCTGGCGATCTCGTCATAAGGCTG
AAGGGTTCCTACCGCCACCACAAGAAAAAGAAGAATAGCGAATCATTCGT
GGGAGCAAAAAGCATCTGCCGCGGAGATCTGGCGAAATCTCTGCTGCAAG
TGACCAGGAAGCGGCCGAATATCAACGTCTATTTCGGCTGCTCCTTCACG
AACATGAACGCCGATAACAGGCGAGAGCGGGCTGTGCGGAGCGTGCTTGC
AACTTTCGAGCGCGCAAGCGGGGGCAGCATCGACTGCGACTATGACATGC
TTGTGGGCGCAGATGGGGTCAACAGCCGTGTCCGCGAAGCTCTCAAGGAG
CATGTTCCCGACTTCACCGTCAGACAGGAAGAGTTGCAACTTTCGAGCGC
GCAAGCGGGGGCAGCATCGACTGCGACTATGACATGCTTGTGGGCGCAGA
TGGGGTCAACAGCCGTGTCCGCGAAGCTCTCAAGGAGCATGTTCCCGACT
TCACCGTCAGACAGGAAGAGGATCCCATGACGTTCAAGACCATCTTAGTT
CCCATCATGGAAATGGAGGAAGCAGAAGAGAACTGGAAGTCGTGTTTCCA
CGTTATTAATACGAAAATCGGGTGCCTTCTTGCCCCCCCCCGGTCAGGAT
CCCATGACGTTCAAGACCATCTTAGTTCCCATCATGGAAATGGAGGAAGC
AGAAGAGAACTGGAAGTCGTGTTTCCACGTTATTAATACGAAAATCGGGT
GCCTTCTTGCCCCCCCCCGGTCAGATGGGATGTTGACGGCCACGGTCATT
CTGCCTGGCGAAGGCCCAAATACGTTCGAGGCGCTCATGAAGACGACGCA
GGATGTGAAGGATTTCTTCGCCACGCATTACCCCGTCTGCTTCGGGCCCG
AAGGACCGAGCGAGGAGGTCGCAAAAGCCTTCCTTGACCAACGATGGGAT
GTTGACGGCCACGGTCATTCTGCCTGGCGAAGGCCCAAATACGTTCGAGG
CGCTCATGAAGACGACGCAGGATGTGAAGGATTTCTTCGCCACGCATTAC
CCCGTCTGCTTCGGGCCCGAAGGACCGAGCGAGGAGGTCGCAAAAGCCTT
CCTTGACCAACGGCCCCAACACCTCCAGTCCACGTACTGCTCGCGATTGG
TACACGAAGATATCGTCCTCCTCGGTGATGCGGCACACTCCATGTGGGCA
TCTCTTGGCCAGGGGGTTAACGCGGCGTTAGGTGAGTAGGCCCCAACACC
TCCAGTCCACGTACTGCTCGCGATTGGTACACGAAGATATCGTCCTCCTC
GGTGATGCGGCACACTCCATGTGGGCATCTCTTGGCCAGGGGGTTAACGC
GGCGTTAGGTGAGTAG
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