mRNA_M-pyrifera_M_contig13003.5818.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig13003.5818.1 vs. uniprot
Match: D7G2I1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2I1_ECTSI) HSP 1 Score: 160 bits (405), Expect = 2.650e-44 Identity = 85/152 (55.92%), Postives = 105/152 (69.08%), Query Frame = 1
Query: 1 LGVTNNADAVVVDIELDTREPYFRIKVTGYHVVELQYPPTRVLIYIDAADRAGLKLDGLHRGVIGCCPVNRKFSIVDKGRQKFTINRMQVPLSLGILSSVYRTQGETIPKLVLDIRKPVDGYMDSAAVYVALSRATDASKLFLLSPVLLSTI 456
LGV NN+D ++ IELD RE Y GY VV L+Y P R+ +YI +AD AGL LDGL RGVI PV RKF+IV ++KFT R Q+PL+ G LSSVYR+QG+T+PK++LDIR+P +D AAVYVALSRAT L LL PV L +
Sbjct: 148 LGVCNNSDGIIRGIELDPREGYAS-STAGYSVVTLRYAPLRIFVYIKSADAAGLHLDGLQRGVIAVAPVERKFTIVGINKRKFTFKRRQIPLTAGCLSSVYRSQGQTMPKIILDIRRPPGHAVDCAAVYVALSRATGLGDLNLLFPVTLQDL 298
BLAST of mRNA_M-pyrifera_M_contig13003.5818.1 vs. uniprot
Match: D7G3U9_ECTSI (ATP-dependent DNA helicase n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3U9_ECTSI) HSP 1 Score: 160 bits (405), Expect = 1.120e-42 Identity = 85/152 (55.92%), Postives = 105/152 (69.08%), Query Frame = 1
Query: 1 LGVTNNADAVVVDIELDTREPYFRIKVTGYHVVELQYPPTRVLIYIDAADRAGLKLDGLHRGVIGCCPVNRKFSIVDKGRQKFTINRMQVPLSLGILSSVYRTQGETIPKLVLDIRKPVDGYMDSAAVYVALSRATDASKLFLLSPVLLSTI 456
LGV NN+D ++ IELD RE Y GY VV L+Y P R+ +YI +AD AGL LDGL RGVI PV RKF+IV ++KFT R Q+PL+ G LSSVYR+QG+T+PK++LDIR+P +D AAVYVALSRAT L LL PV L +
Sbjct: 1855 LGVCNNSDGIIRGIELDPREGYAS-STAGYSVVTLRYAPLRIFVYIKSADAAGLHLDGLQRGVIAVAPVERKFTIVGINKRKFTFKRRQIPLTAGCLSSVYRSQGQTMPKIILDIRRPPGHAVDCAAVYVALSRATGLGDLNLLFPVTLQDL 2005
BLAST of mRNA_M-pyrifera_M_contig13003.5818.1 vs. uniprot
Match: A0A6H5KXW4_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXW4_9PHAE) HSP 1 Score: 115 bits (287), Expect = 7.770e-27 Identity = 56/118 (47.46%), Postives = 77/118 (65.25%), Query Frame = 1
Query: 1 LGVTNNADAVVVDIELDTREPYFRIKVTGYHVVELQYPPTRVLIYIDAADRAGLKLDGLHRGVIGCCPVNRKFSIVDKGRQKFTINRMQVPLSLGILSSVYRTQGETIPKLVLDIRKP 354
LGV NN+D ++ IELD E + GY VV L+Y P +V +YI AD AGL L+GL RGV+ PV ++ +I G+ KF R Q+PL G +SSV+R+QG+T+PK++LDI P
Sbjct: 627 LGVCNNSDGIIRGIELDPLEDFLLDPTPGYSVVNLRYAPLQVFVYIKTADDAGLHLEGLDRGVVAIAPVEKECTIEGIGKGKFIFKRRQLPLPAGCVSSVFRSQGQTMPKIILDIHPP 744
BLAST of mRNA_M-pyrifera_M_contig13003.5818.1 vs. uniprot
Match: A0A2R6NF34_9APHY (ATP-dependent DNA helicase n=1 Tax=Hermanssonia centrifuga TaxID=98765 RepID=A0A2R6NF34_9APHY) HSP 1 Score: 74.7 bits (182), Expect = 1.020e-12 Identity = 50/145 (34.48%), Postives = 77/145 (53.10%), Query Frame = 1
Query: 1 LGVTNNADAVVVDIELDTREPYFRIKVTGYHVVELQYPPTRVLIYIDAADRAGLKLDGLHRGVIGCCPVNRKFSI-VDKGRQKFTINRMQVPLSLGILSSVYRTQGETIPKLVLDIRKPVDGYMDSAAVYVALSRATDASKLFLL 432
L +TN A + I L E +V VV+L P +L+ ++ + L+GL VI PV + FSI + ++K T+ R+Q P++ + YR+QG+TIP +V+DI KP G + VYVALSR++ + LL
Sbjct: 682 LDITNGARGTITGIGLHPEEN----EVPNERVVQLSRTPVYILVKLERTKMS--PLEGLEESVIPIVPVVKSFSIEAEAEKRKKTVRRLQFPMTEAYAFTDYRSQGQTIPYVVVDIAKPPSGSLTLFNVYVALSRSSGRHTIRLL 820
BLAST of mRNA_M-pyrifera_M_contig13003.5818.1 vs. uniprot
Match: A0A8H8MJZ9_9AGAM (ATP-dependent DNA helicase n=1 Tax=Ceratobasidium sp. AG-Ba TaxID=170446 RepID=A0A8H8MJZ9_9AGAM) HSP 1 Score: 74.7 bits (182), Expect = 1.060e-12 Identity = 51/145 (35.17%), Postives = 76/145 (52.41%), Query Frame = 1
Query: 1 LGVTNNADAVVVDIELDTREPYFRIKVTGYHVVELQYPPTRVLIYIDAADRAGLKLDGLHRGVIGCCPVNRKFSIVDKGRQKFTINRMQVPLSLGILSSVYRTQGETIPKLVLDIRKPVD-GYMDSAAVYVALSRATDASKLFLL 432
L + N + VVVD+ LD RE + V L+YPP VL+ +D A K+DGL VI P R+F I K + R Q+P++ + YR+QG+TI K+++DI P G M +++YV+ SR+ + LL
Sbjct: 1155 LDIANGSRGVVVDLILDHREG--QEAAAEVSEVHLKYPPACVLVQLDRTKAA--KIDGLGERVIPIFPRVRRFDIPQKKGKVLHAKRRQIPITSAYAFTDYRSQGQTISKVIVDIANPPPPGRMTLSSIYVSFSRSFGRKTIRLL 1295
BLAST of mRNA_M-pyrifera_M_contig13003.5818.1 vs. uniprot
Match: A0A146HLB2_MYCCL (ATP-dependent DNA helicase n=1 Tax=Mycena chlorophos TaxID=658473 RepID=A0A146HLB2_MYCCL) HSP 1 Score: 74.3 bits (181), Expect = 1.470e-12 Identity = 44/133 (33.08%), Postives = 71/133 (53.38%), Query Frame = 1
Query: 7 VTNNADAVVVDIELDTREPYFRIKVTGYHVVELQYPPTRVLIYIDAADRAGLKLDGLHRGVIGCCPVNRKFSIVDKGRQKFTINRMQVPLSLGILSSVYRTQGETIPKLVLDIRKPVDGYMDSAAVYVALSRA 405
+ N V+VDI+LD +EPY + + V L+YPP VL + + G+ GVI P F+I ++ TI R Q ++ G + Y++QG+TI ++++D+ P G + +VYVALSR+
Sbjct: 1651 LANGTRGVIVDIKLDPKEPY-DLNIDEDGRVHLRYPPAAVLFRPNTSSFG--TFPGMEEGVIPILPSTGTFTIPTNVQKSLTIKRRQFAMTPGYAFTDYKSQGQTIERVIIDLADPPSGKLTPFSVYVALSRS 1780
BLAST of mRNA_M-pyrifera_M_contig13003.5818.1 vs. uniprot
Match: A0A066V913_9AGAM (ATP-dependent DNA helicase (Fragment) n=1 Tax=Rhizoctonia solani AG-8 WAC10335 TaxID=1287689 RepID=A0A066V913_9AGAM) HSP 1 Score: 74.3 bits (181), Expect = 1.470e-12 Identity = 49/147 (33.33%), Postives = 77/147 (52.38%), Query Frame = 1
Query: 1 LGVTNNADAVVVDIELDTREPYFRI---KVTGYHVVELQYPPTRVLIYIDAADRAGLKLDGLHRGVIGCCPVNRKFSIVDKGRQKFTINRMQVPLSLGILSSVYRTQGETIPKLVLDIRKPVDGYMDSAAVYVALSRATDASKLFLL 432
L V N A VV I D RE + + + TG + L YPP VL+ + + ++GL GV+ P+ RK+ I K + + R Q+P++ + YR+QG+TI K+++DI +P G + YVALSR++ + LL
Sbjct: 1653 LDVANGARGVVERIIFDRREEFPAMVASESTGPTEMSLTYPPECVLVRLYRTKAS--TIEGLGPGVVPIFPMTRKYDITRKQGKSTPVTRRQLPITAAYAFTDYRSQGQTIKKVIVDIARPPSGGLTPFNAYVALSRSSGRRTIRLL 1797
BLAST of mRNA_M-pyrifera_M_contig13003.5818.1 vs. uniprot
Match: A0A409WW68_PSICY (ATP-dependent DNA helicase n=1 Tax=Psilocybe cyanescens TaxID=93625 RepID=A0A409WW68_PSICY) HSP 1 Score: 74.3 bits (181), Expect = 1.480e-12 Identity = 48/146 (32.88%), Postives = 75/146 (51.37%), Query Frame = 1
Query: 7 VTNNADAVVVDIELDTREPYFRIKVTGYHVVELQYPPTRVLIYIDAADRAGLKLDGLHRGVIGCCPVNRKFSIVDKGRQKFT--INRMQVPLSLGILSSVYRTQGETIPKLVLDIRKPVDGYMDSAAVYVALSRATDASKLFLLSP 438
+ N ++ DI LD RE G +L+YPP +L + R L+ DG+ G+I P FS+ KG++K T I R Q ++ G + Y++QG+TI +++D+ KP G + VYVA+SR+ + LL P
Sbjct: 1802 IANGTRGIIHDIILDEREWTHPTITDG--TAKLKYPPAMILFKPNK--RTELQFDGVEPGLIPLTPSEATFSVKTKGKKKKTMLIKRRQYGITAGYAFTDYKSQGQTIEYVIIDLAKPPTGSLSPFGVYVAMSRSRGRDTIRLLRP 1943
BLAST of mRNA_M-pyrifera_M_contig13003.5818.1 vs. uniprot
Match: A0A165G1A7_9BASI (Uncharacterized protein (Fragment) n=2 Tax=Calocera cornea HHB12733 TaxID=1353952 RepID=A0A165G1A7_9BASI) HSP 1 Score: 69.3 bits (168), Expect = 2.160e-12 Identity = 34/89 (38.20%), Postives = 54/89 (60.67%), Query Frame = 1
Query: 166 LDGLHRGVIGCCPVNRKFSIVDKGRQKFTINRMQVPLSLGILSSVYRTQGETIPKLVLDIRKPVDGYMDSAAVYVALSRATDASKLFLL 432
L GL G+I P +KF IVD ++ T+ R+Q+P++ + YR+QG+TIP +++DI P G++ + YVALSR+ + LL
Sbjct: 1 LSGLEAGIIPILPTTKKFRIVDARGKEHTVTRLQLPMTPAYAFTDYRSQGQTIPNVIVDISTPPTGHITAFNAYVALSRSKGRQSIRLL 89
BLAST of mRNA_M-pyrifera_M_contig13003.5818.1 vs. uniprot
Match: A0A1J8QLR3_9AGAM (Uncharacterized protein n=1 Tax=Rhizopogon vesiculosus TaxID=180088 RepID=A0A1J8QLR3_9AGAM) HSP 1 Score: 71.2 bits (173), Expect = 2.620e-12 Identity = 48/144 (33.33%), Postives = 75/144 (52.08%), Query Frame = 1
Query: 1 LGVTNNADAVVVDIELDTREPYFRIKVTGYHVVELQYPPTRVLIYIDAADRAGLKLDGLHRGVIGCCPVNRKFSIVDKGRQKFTINRMQVPLSLGILSSVYRTQGETIPKLVLDIRKPVDGYMDSAAVYVALSRATDASKLFLL 432
L + N++ + I LD RE F + V +VEL YPP +L+ ++ ++L GL + V+ + F+I QK +I R Q+P++ + YR+QG+TI L++DI P G + VYVALSR + LL
Sbjct: 13 LDIANSSCGEITKIVLDERETGFTLTVP---IVELAYPPAYILVKMNRTK--AVQLAGLEKNVLSLVSLGSTFTITHGKGQK-SIKRKQLPITAAYSFTDYRSQGQTIANLIIDIGTPPTGGLTFFNVYVALSRGHGRGNIRLL 150 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig13003.5818.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig13003.5818.1 >prot_M-pyrifera_M_contig13003.5818.1 ID=prot_M-pyrifera_M_contig13003.5818.1|Name=mRNA_M-pyrifera_M_contig13003.5818.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=153bp LGVTNNADAVVVDIELDTREPYFRIKVTGYHVVELQYPPTRVLIYIDAADback to top mRNA from alignment at M-pyrifera_M_contig13003:819..1277+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig13003.5818.1 ID=mRNA_M-pyrifera_M_contig13003.5818.1|Name=mRNA_M-pyrifera_M_contig13003.5818.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=459bp|location=Sequence derived from alignment at M-pyrifera_M_contig13003:819..1277+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig13003:819..1277+ >mRNA_M-pyrifera_M_contig13003.5818.1 ID=mRNA_M-pyrifera_M_contig13003.5818.1|Name=mRNA_M-pyrifera_M_contig13003.5818.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=918bp|location=Sequence derived from alignment at M-pyrifera_M_contig13003:819..1277+ (Macrocystis pyrifera P11B4 male)back to top |