mRNA_M-pyrifera_M_contig13.5815.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig13.5815.1 vs. uniprot
Match: A0A034WV72_BACDO (Werner Syndrome-like exonuclease n=1 Tax=Bactrocera dorsalis TaxID=27457 RepID=A0A034WV72_BACDO) HSP 1 Score: 74.3 bits (181), Expect = 2.660e-13 Identity = 51/155 (32.90%), Postives = 77/155 (49.68%), Query Frame = 1
Query: 1 PVVGFDMEWHAPCVKNVSPSRTALIQICSSATFCAVFALGDFDEMPISLPTFLWNQDVLK---GTSRSCLHKDFSDLKGPAGPYAELTSLLPQQPAKKRSLAYLVLVDTDKKMDKDLGEGALFDWTSPINPADQLQYAVNDAAAGLEVYEALLRK 456
PV+G D EW V +L+Q+CS +CAV L +P+SL L ++ V+K G ++ C H + DL P +L + AK ++LA + + KDL E L DW + Q+QYA +DA AG+E+Y+ L +K
Sbjct: 55 PVLGLDCEW-------VDAPNVSLLQLCSHKGYCAVIRLCKMASIPMSLCNLLSDRKVVKVGVGIAKDCEHLEECDL--PTNSALDLRFVAKLTGAKPQNLADMYKAVVGGTLKKDL-ELTLSDWEAYTLTPQQIQYAADDAKAGIEIYKTLAKK 199
BLAST of mRNA_M-pyrifera_M_contig13.5815.1 vs. uniprot
Match: UPI001A97238D (exonuclease 3'-5' domain-containing protein 2-like n=1 Tax=Bactrocera tryoni TaxID=59916 RepID=UPI001A97238D) HSP 1 Score: 73.2 bits (178), Expect = 7.230e-13 Identity = 50/155 (32.26%), Postives = 77/155 (49.68%), Query Frame = 1
Query: 1 PVVGFDMEWHAPCVKNVSPSRTALIQICSSATFCAVFALGDFDEMPISLPTFLWNQDVLK---GTSRSCLHKDFSDLKGPAGPYAELTSLLPQQPAKKRSLAYLVLVDTDKKMDKDLGEGALFDWTSPINPADQLQYAVNDAAAGLEVYEALLRK 456
P +G D EW V +++Q+CS +CAV L + +P+SL L ++ V+K GT++ C H + DL P +L + AK ++LA + + KDL E DW + Q+QYA +DA AG+E+Y+AL K
Sbjct: 55 PALGLDCEW-------VDAPYVSVLQLCSHKGYCAVIRLCKMESIPMSLCNLLSDRKVVKVGVGTAKDCEHLEECDL--PTKSALDLRFVAKLTGAKAQNLAEMYKAVVGGTLKKDL-ELIRSDWEADTLTPQQIQYAADDAIAGIEIYKALANK 199
BLAST of mRNA_M-pyrifera_M_contig13.5815.1 vs. uniprot
Match: A0A0K8TXS6_BACLA (Werner syndrome ATP-dependent helicase n=3 Tax=Bactrocera latifrons TaxID=174628 RepID=A0A0K8TXS6_BACLA) HSP 1 Score: 69.7 bits (169), Expect = 1.430e-11 Identity = 49/155 (31.61%), Postives = 77/155 (49.68%), Query Frame = 1
Query: 1 PVVGFDMEWHAPCVKNVSPSRTALIQICSSATFCAVFALGDFDEMPISLPTFLWNQDVLK---GTSRSCLHKDFSDLKGPAGPYAELTSLLPQQPAKKRSLAYLVLVDTDKKMDKDLGEGALFDWTSPINPADQLQYAVNDAAAGLEVYEALLRK 456
PV+G D EW V+ +++Q+CS +CAV L D +P+SL L ++ V+K G + C + + DL P +L + AK ++LA + + KDL + DW + Q+QYA +DA AG+E+Y+AL K
Sbjct: 55 PVLGLDCEW-------VNAPNVSVLQLCSHKGYCAVIRLCKMDTIPMSLCNLLIDRKVVKVGVGIKKDCEYLEECDL--PTKSALDLRFVAKLTGAKAQNLAEMYKAVVGGTLTKDL-QLIRSDWEADTLTPKQVQYAADDAKAGIEIYKALSNK 199
BLAST of mRNA_M-pyrifera_M_contig13.5815.1 vs. uniprot
Match: A0A0A1XE10_ZEUCU (Werner syndrome ATP-dependent helicase homolog n=3 Tax=Zeugodacus cucurbitae TaxID=28588 RepID=A0A0A1XE10_ZEUCU) HSP 1 Score: 59.3 bits (142), Expect = 9.900e-8 Identity = 46/155 (29.68%), Postives = 73/155 (47.10%), Query Frame = 1
Query: 1 PVVGFDMEWHAPCVKNVSPSRTALIQICSSATFCAVFALGDFDEMPISLPTFLWNQDVLK---GTSRSCLHKDFSDLKGPAGPYAELTSLLPQQPAKKRSLAYLVLVDTDKKMDKDLGEGALFDWTSPINPADQLQYAVNDAAAGLEVYEALLRK 456
PV+GFD EW V+ +L+Q+CS +CAV L + P SL L ++ V+K G + C + +L + + L + A+ + Y +V K D +L + DW + Q+QYA +DA AG+E+Y L +K
Sbjct: 55 PVLGFDCEW-------VNAPDVSLLQLCSHKGYCAVIRLCNIPNPPSSLCDLLSDRKVVKVGVGITSDCQYLRTCNLPTNSALDLRFMAKLTGERAQNLADMYKDVVGGTLKKDFEL---SCSDWEAFQLTPQQIQYAADDAIAGMEIYLQLAKK 199
BLAST of mRNA_M-pyrifera_M_contig13.5815.1 vs. uniprot
Match: UPI0006B6D6A1 (exonuclease 3'-5' domain-containing protein 2 n=1 Tax=Bactrocera oleae TaxID=104688 RepID=UPI0006B6D6A1) HSP 1 Score: 54.7 bits (130), Expect = 4.750e-6 Identity = 42/155 (27.10%), Postives = 68/155 (43.87%), Query Frame = 1
Query: 1 PVVGFDMEWHAPCVKNVSPSRTALIQICSSATFCAVFALGDFDEMPISLPTFLWNQDVLK---GTSRSCLHKDFSDLKGPAGPYAELTSLLPQQPAKKRSLAYLVLVDTDKKMDKDLGEGALFDWTSPINPADQLQYAVNDAAAGLEVYEALLRK 456
PVVGFD EW V +++Q+CS + +P SL L ++ V+K GT+R C + L + + L + A+ + Y+ +V L + DW + Q+QYA +DA AG+E+Y+ L +K
Sbjct: 56 PVVGFDCEW-------VHEGAVSVLQLCSHXXXXXXXXXXKIENLPRSLCDLLKDRKVVKVGVGTARDCTFLEACGLPTRSALDLRFVAKLTGENAQNLAAMYMDVVGGTLTKSFSL---SCSDWEAYKLTPQQVQYAADDAIAGIEIYKTLAKK 200 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig13.5815.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 5
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig13.5815.1 >prot_M-pyrifera_M_contig13.5815.1 ID=prot_M-pyrifera_M_contig13.5815.1|Name=mRNA_M-pyrifera_M_contig13.5815.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=146bp MEWHAPCVKNVSPSRTALIQICSSATFCAVFALGDFDEMPISLPTFLWNQback to top mRNA from alignment at M-pyrifera_M_contig13:28557..29180+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig13.5815.1 ID=mRNA_M-pyrifera_M_contig13.5815.1|Name=mRNA_M-pyrifera_M_contig13.5815.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=624bp|location=Sequence derived from alignment at M-pyrifera_M_contig13:28557..29180+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig13:28557..29180+ >mRNA_M-pyrifera_M_contig13.5815.1 ID=mRNA_M-pyrifera_M_contig13.5815.1|Name=mRNA_M-pyrifera_M_contig13.5815.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=876bp|location=Sequence derived from alignment at M-pyrifera_M_contig13:28557..29180+ (Macrocystis pyrifera P11B4 male)back to top |