mRNA_M-pyrifera_M_contig12996.5812.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig12996.5812.1 vs. uniprot
Match: D7FVL6_ECTSI (Hypothetical leucine rich repeat and GCG domain-containing receptor n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVL6_ECTSI) HSP 1 Score: 235 bits (600), Expect = 8.330e-67 Identity = 124/217 (57.14%), Postives = 157/217 (72.35%), Query Frame = 1
Query: 67 KTQFFGLEALYNATGGERWTSSTGWRDAALGVCEWYGVACDSSGENVTGLSLAGNGLAGNLSDAAEFFQVVSLEDVDLSDNELVGPVALGLGLMSNLGQLDLSRNELSSFPASWGSEASSLQHLSLRSNNISGTLPSEWLDVNGTTTTTSNSYPLVHANETSAWLPELRTLDLRDNNIAMTVYTALQSVIGLSSLQVLDLSSNALSGNLAGSFDLHY 717
+ Q GLEALY AT G+ W +STGW D +LGVC WYGV CDS G NVTG+SL+ N L G++S+A + V+SLE++DLSDN+L GPV L LG+M N+ LDLS NELS FPA+WGS AS L+HLSL++N ISG+ P+ WL+V T S+SYPLVH +S WLPELR+L L NN+ T Y ALQ+V SLQ LDLS NAL+G++ + L+Y
Sbjct: 36 EVQIAGLEALYYATNGQDWANSTGWSDDSLGVCSWYGVTCDSEGGNVTGISLSNNLLVGDVSEATDLTNVISLEEMDLSDNQLSGPVPLNLGMMPNMETLDLSGNELSYFPAAWGSGASMLRHLSLQNNRISGSFPAAWLNV-----TDSSSYPLVHLQPSSPWLPELRSLLLGGNNMNATGYVALQAVANWRSLQTLDLSDNALTGSVDDALALYY 247
BLAST of mRNA_M-pyrifera_M_contig12996.5812.1 vs. uniprot
Match: D7FVL7_ECTSI (Hypothetical leucine rich repeat and GCG domain-containing receptor n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVL7_ECTSI) HSP 1 Score: 211 bits (536), Expect = 1.740e-58 Identity = 133/300 (44.33%), Postives = 150/300 (50.00%), Query Frame = 1
Query: 37 GGVGVWASYSKTQFFGLEALYNATGGERWTSSTGWRDAALGVCEWYGVACDSSGENVTGLSLAGNGLAGNLSDAAEFFQVVSLEDVDLSDNELVGPVALGLGLMSNLGQLDLSRNELSSFPASWGSEASSLQHLSLRSNNISGTLPSEWLDVNGTTTTTSNSYPLVHANETSAWLPELRTLDLRDNNIAMTVYTALQSVIGLSSLQVLDLSSNALSGNLAGSFDLHYCDEGGSSLSGACDTAASKTRASLLAIVLLASNSISGGLEADSLPRSMSVLTLSDNLLHGPVPEDYSQLSVFFA 936
G GV +SY +TQ GLEALYNATGGE+W SS+GWRDA LGVC+WYGV CDS G NVTGL+LAGNGLAGNLS+A E F V+SL +DLSDNELVGPVALG GLM +L LDLSRN+LS FP SWG+EASSL+HLSL+ N ISG I G LE S PRS+S LT+SDNLL GPVPED +QLSVF A
Sbjct: 22 GAGGVSSSYLETQQVGLEALYNATGGEQWASSSGWRDATLGVCDWYGVVCDSDGRNVTGLALAGNGLAGNLSEAVELFDVLSLISIDLSDNELVGPVALGFGLMPDLEVLDLSRNDLSYFPTSWGTEASSLRHLSLQQNEISG---------------------------------------------------------------------------------------------------------------------IEGELETHSFPRSLSALTVSDNLLTGPVPEDCAQLSVFLA 204
BLAST of mRNA_M-pyrifera_M_contig12996.5812.1 vs. uniprot
Match: A0A357KQ35_9GAMM (Uncharacterized protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A357KQ35_9GAMM) HSP 1 Score: 67.8 bits (164), Expect = 7.210e-9 Identity = 35/103 (33.98%), Postives = 56/103 (54.37%), Query Frame = 1
Query: 85 LEALYNATGGERWTSSTGWRDA----ALGVCEWYGVACDSSGENVTGLSLAGNGLAGNLSDAAEFFQVVSLEDVDLSDNELVGPVALGLGLMSNLGQLDLSRN 381
L ++ AT G W+++ GW A +G W GVACD++G+ VTGL L L G L D F + +L +DL N L G + +G +++L +++ +N
Sbjct: 40 LLEIFTATNGNTWSTNNGWGSANSICGVGTSGWVGVACDTTGDTVTGLDLGNRNLVGELPDGV-FAGLPTLNQLDLRSNHLTGALPGSIGGLASLSSIEIQQN 141
BLAST of mRNA_M-pyrifera_M_contig12996.5812.1 vs. uniprot
Match: UPI0009E4FC00 (receptor-like kinase TMK4 n=2 Tax=Phalaenopsis equestris TaxID=78828 RepID=UPI0009E4FC00) HSP 1 Score: 64.7 bits (156), Expect = 7.570e-8 Identity = 71/216 (32.87%), Postives = 103/216 (47.69%), Query Frame = 1
Query: 166 EWYGVACDSSGENVTGLSLAGNGLAGNLSDAAEFFQVVSLEDVDLSDNELVGPVALGLGLMSNLGQLDLSRNELSSFPASWGSEASSLQHLSLRSNNISG-TLPSEWLDVNGTTTTTSNSYPLVHANETSAWLPELRTLDLRDNNIAMTVYTALQSVIG-LSSLQVLDLSSNALSGNLAGSFDLHYC------DEGGSSLSGACDTAASKTRASLL 789
+W GV+C SG +TG++L G+G+AG L + + SL+ + LS N+L GP+ LG ++ L + L N SS P+ + S +SLQ LS+ N S LP+ D T+ + SN+ +V+ +L LSSLQVL LS N LSG+L S L ++ GS LSG D ++ SLL
Sbjct: 62 KWSGVSC--SGGRITGINLRGSGIAGTL--PSSLSSLSSLQSLFLSSNQLSGPLP-SLGGLAALEIVSLDANLFSSVPSDFFSGLASLQKLSINDNPFSPWQLPASMADCPLTSFSASNA----------------------------SVFGSLPDFFDRLSSLQVLRLSYNNLSGSLPASLSLSQIRNFILNNQQGSKLSGRIDVIGQMSQLSLL 244
BLAST of mRNA_M-pyrifera_M_contig12996.5812.1 vs. uniprot
Match: M5X3M0_PRUPE (LRRNT_2 domain-containing protein n=1 Tax=Prunus persica TaxID=3760 RepID=M5X3M0_PRUPE) HSP 1 Score: 63.2 bits (152), Expect = 1.950e-7 Identity = 65/212 (30.66%), Postives = 95/212 (44.81%), Query Frame = 1
Query: 163 CEWYGVACDSSGENVTGLSLAGNGLAGNLSDAAEFFQVVSLEDVDLSDNELVG-PVALGLGLMSNLGQLDLSRNELSSFPASWGSEASSLQHLSLRSNNISGTLPSEWLDVNGTTTTTSNSYPLVH-----ANETS-----------AWLPELRT-------LDLRDNNIAMTVYTALQSVIGLSSLQVLDLSSNALSGNLAGSFDLHYCDE 726
C W GV C+ +V GL+L GL GN+ + F + L+ +DLS N+ G P+ G ++ LDLS S+F SE S L LSL +SG + +NGT + S P + +N+ S +WL EL + + +N + ++ LSSLQ+LDLS+N LSG + H C E
Sbjct: 86 CAWSGVTCEKMTGHVIGLNLGSGGLQGNIHSNSSLFSLGHLKRLDLSSNDFGGSPIPSKFGGFVSMTHLDLS---YSNFSGPIPSEISHLSTLSLVELYLSGNNYVDGNQLNGTIPSWLGSLPSLELLYLGSNQLSGNIIEFQSRSLSWLGELPIPSPSTSYIFISNNQFTGEIPP---TICSLSSLQILDLSNNKLSGKI------HQCIE 285
BLAST of mRNA_M-pyrifera_M_contig12996.5812.1 vs. uniprot
Match: A0A7S2I6J0_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2I6J0_9STRA) HSP 1 Score: 62.4 bits (150), Expect = 3.480e-7 Identity = 38/133 (28.57%), Postives = 63/133 (47.37%), Query Frame = 1
Query: 85 LEALYNATGGERWTSSTGWRDAALGVCEWYGVACDSSGENVTGLSLAGNGLAGNLSDAAEFFQVVSLEDVDLSDNELVGPVALGLGLMSNLGQLDLSRNELSSFPASWGSEASSLQHLSLRSNNISGTLPSEW 483
L Y GG W W + + +C W+G+ C+ + E V ++L N + G E F + +L+ + L N L G G+ NL +L L + S +A++L+ ++LR N ISGT P ++
Sbjct: 194 LMKFYTTCGGYAWNKDANWGNQEVSICNWFGIRCNGNEETVESINLGANNIVGT--PPTELFGLRNLKSLSLYSNPLTGFNFEGIEKAINLKELLLDATGIQSINGI--DKATNLEIVNLRFNRISGTFPEDF 322
BLAST of mRNA_M-pyrifera_M_contig12996.5812.1 vs. uniprot
Match: A0A448YZ34_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YZ34_9STRA) HSP 1 Score: 62.0 bits (149), Expect = 4.980e-7 Identity = 37/102 (36.27%), Postives = 49/102 (48.04%), Query Frame = 1
Query: 85 LEALYNATGGERWTSSTGWRDAALGVCEWYGVACDSSGENVTGLSLAGNGLAGNLSDAAEFFQVVSLEDVDLSDNELVGPVALGLGLMSNLGQLDLSRNELS 390
L LY T G WT+ST W D+ L CEW+GV CD GN + ++DLSDN + GP+ LG +S+L L++S N LS
Sbjct: 268 LCVLYYTTNGTFWTNSTDWMDSDLSECEWHGVVCD------------GNSF---------------IREIDLSDNNITGPIPYELGSLSSLKFLNMSFNLLS 342
BLAST of mRNA_M-pyrifera_M_contig12996.5812.1 vs. uniprot
Match: A0A6B0XT25_9BACT (Uncharacterized protein n=1 Tax=Gemmatimonadales bacterium TaxID=2448054 RepID=A0A6B0XT25_9BACT) HSP 1 Score: 61.6 bits (148), Expect = 5.880e-7 Identity = 46/112 (41.07%), Postives = 60/112 (53.57%), Query Frame = 1
Query: 10 LLATTAPGGGGVGVWASYSK-----------TQFFGLEALYNATGGERWTSSTGW-RDAALGVCEWYGVACDSSGENVTGLSLAGNGLAGNLSDAAEFFQVVSLEDVDLSDN 309
L+ APG + V AS + ++ F L ALYNATGG RWT S W DA G +W+GV D+ G VTGL L+G GL G L + EF + +L ++LS N
Sbjct: 189 LVTAVAPGSVVISVQASSAALTATARIVVNVSERFALVALYNATGGSRWTRSGNWLTDAPTG--QWHGVTADAEGR-VTGLDLSGIGLEGRLPE--EFAHLTNLRRLNLSYN 295
BLAST of mRNA_M-pyrifera_M_contig12996.5812.1 vs. uniprot
Match: A0A7S4AVN8_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4AVN8_9STRA) HSP 1 Score: 60.1 bits (144), Expect = 2.110e-6 Identity = 35/103 (33.98%), Postives = 47/103 (45.63%), Query Frame = 1
Query: 85 LEALYNATGGERWTSSTGWRDAALGVCEWYGVACDSSGENVTGLSLAGNGLAGNLSDAAEFFQVVSLEDVDLSDNELVGPVALGLGLMSNLGQLDLSRNELSS 393
L + AT G W S W DA CEWYGVACD + +E++DLSDN + GP+ +G +S+L L++S N LSS
Sbjct: 266 LCVFHYATSGNFWNKSNNWMDAERSECEWYGVACDDKN--------------------------LIIEEIDLSDNNITGPLPDEIGSLSSLKLLNMSFNLLSS 342
BLAST of mRNA_M-pyrifera_M_contig12996.5812.1 vs. uniprot
Match: A0A7S0BY13_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0BY13_9STRA) HSP 1 Score: 59.3 bits (142), Expect = 2.230e-6 Identity = 40/106 (37.74%), Postives = 58/106 (54.72%), Query Frame = 1
Query: 163 CEWYGVACDSSGENVTGLSLAGNGLAGNLSDAAEFFQVVSLEDVDLSDNELVGPVALGLGLMSNLGQLDLSRNELSSFPASWGSEASSLQHLSLRSNNISGTLPSE 480
C W+G+ CD+SG VT + LA N LAG +E + + SLE + N + +G+ NL L + +++S A G ASSL H++LR N +SG LP E
Sbjct: 8 CTWHGIECDNSGHFVTSIDLAANNLAGKRCPPSEIYVLSSLEKLAFYSNP-ISFTFIGIENALNLKTLLVDSTKITSL-AGIG-RASSLTHVNLRFNRLSGALPDE 110 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig12996.5812.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 20
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig12996.5812.1 >prot_M-pyrifera_M_contig12996.5812.1 ID=prot_M-pyrifera_M_contig12996.5812.1|Name=mRNA_M-pyrifera_M_contig12996.5812.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=312bp SSSLLATTAPGGGGVGVWASYSKTQFFGLEALYNATGGERWTSSTGWRDAback to top mRNA from alignment at M-pyrifera_M_contig12996:466..2101- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig12996.5812.1 ID=mRNA_M-pyrifera_M_contig12996.5812.1|Name=mRNA_M-pyrifera_M_contig12996.5812.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=1636bp|location=Sequence derived from alignment at M-pyrifera_M_contig12996:466..2101- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig12996:466..2101- >mRNA_M-pyrifera_M_contig12996.5812.1 ID=mRNA_M-pyrifera_M_contig12996.5812.1|Name=mRNA_M-pyrifera_M_contig12996.5812.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1872bp|location=Sequence derived from alignment at M-pyrifera_M_contig12996:466..2101- (Macrocystis pyrifera P11B4 male)back to top |