mRNA_M-pyrifera_M_contig1299.5809.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig1299.5809.1 vs. uniprot
Match: A0A6H5L076_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L076_9PHAE) HSP 1 Score: 82.4 bits (202), Expect = 8.020e-13 Identity = 69/129 (53.49%), Postives = 78/129 (60.47%), Query Frame = 1
Query: 988 THVENSAEGKEL-EEAKLPDLRMVIERSRRRVKPT----QELEKGAEGREKGGGVAVAVKPPRGRMGGVLGTMRGFSPEGPSSNG-KEAGLKRGLGADIPS---QAKARSTPGARLLSSAVMQSLQPPR 1347
T V +SA+G + ++A LPDLR VIERSRRR K QE EKG +G G VA RGRM G G MRGFSP + NG E G+KR LG D +A A PGARLLSSAVMQSLQP R
Sbjct: 434 TVVSDSAKGNDTAQKANLPDLRTVIERSRRRGKMNPSRGQEEEKG-----EGEGPVVA----RGRMAGAPGVMRGFSPSDEADNGTSEGGVKRVLGDDDSQPQHKAFAGGQPGARLLSSAVMQSLQPAR 553
BLAST of mRNA_M-pyrifera_M_contig1299.5809.1 vs. uniprot
Match: D7G5I3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5I3_ECTSI) HSP 1 Score: 70.1 bits (170), Expect = 4.590e-9 Identity = 64/129 (49.61%), Postives = 75/129 (58.14%), Query Frame = 1
Query: 988 THVENSAEGKEL-EEAKLPDLRMVIERSRRRVKPTQELEKGAEGREKGGGVAVAVKPPRGRMGGVLGTMRGFSPEGP---SSNG-KEAGLKRGLGADIPSQAK----ARSTPGARLLSSAVMQSLQPPR 1347
T V +SA+G + ++A LPDLRMVIERSRRR K + +G E V RGRM G G MR FS G + NG +E G+KRG G D SQ + A PGARLLSSAVMQSLQP R
Sbjct: 442 TVVSDSAKGDDTAQKANLPDLRMVIERSRRRGK--MKPPRGQEXXXXXXXXXPVVA--RGRMAGAPGVMRAFSSSGEEDGADNGTREGGVKRGHG-DDDSQPQHKTFAAGQPGARLLSSAVMQSLQPAR 565 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig1299.5809.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig1299.5809.1 >prot_M-pyrifera_M_contig1299.5809.1 ID=prot_M-pyrifera_M_contig1299.5809.1|Name=mRNA_M-pyrifera_M_contig1299.5809.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=494bp MVREICSQLEDLLTAGTATAFSKWLGGHLRGLEEKTVKAESKNPPKGEGRback to top mRNA from alignment at M-pyrifera_M_contig1299:16910..27418- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig1299.5809.1 ID=mRNA_M-pyrifera_M_contig1299.5809.1|Name=mRNA_M-pyrifera_M_contig1299.5809.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=10509bp|location=Sequence derived from alignment at M-pyrifera_M_contig1299:16910..27418- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig1299:16910..27418- >mRNA_M-pyrifera_M_contig1299.5809.1 ID=mRNA_M-pyrifera_M_contig1299.5809.1|Name=mRNA_M-pyrifera_M_contig1299.5809.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=2964bp|location=Sequence derived from alignment at M-pyrifera_M_contig1299:16910..27418- (Macrocystis pyrifera P11B4 male)back to top |