mRNA_M-pyrifera_M_contig12972.5805.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig12972.5805.1
Unique NamemRNA_M-pyrifera_M_contig12972.5805.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
[Close]
BLAST of mRNA_M-pyrifera_M_contig12972.5805.1 vs. uniprot
Match: D7FT40_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT40_ECTSI)

HSP 1 Score: 372 bits (954), Expect = 4.440e-117
Identity = 190/208 (91.35%), Postives = 198/208 (95.19%), Query Frame = 1 
Query: 1186 RVKTSSGYYAGLQSGKDFKVVEQELKRKHDADMKGADKSSSGQGATTVYRDKKGRKLDMLNEFMKQQDARAGKEVEEAKEQFAWGRGKVQKEEEQQWKEELENIAAEPFARTVDDTRLEDARKAEIRPDDPMAAYMAKKKVKERVKSGKPVKPEYKGPAPKPNRFGIRPGYRWDGNDRSNGWEDKIVAKGVDDNYKAHLAYKWATADM 1809
            RVKTSSGYYAGLQSGKDFKVVEQ LKRKHDA+MKGADKSSSGQGA TVYRDKKGRKLDMLNEFMK QDARAGK+VEEAK+QFAWGRGKVQKEEE+QWKEELENIAAEPFARTVDDTRLE+ARKAEIR DDPMAAYMAKKK KE VKSGKP+KPEYKGP PKPNRFGIRPGYRWDGNDR NGWE +IVAKGVD+NYKA LAYKWATADM
Sbjct:  422 RVKTSSGYYAGLQSGKDFKVVEQNLKRKHDAEMKGADKSSSGQGAETVYRDKKGRKLDMLNEFMKSQDARAGKKVEEAKDQFAWGRGKVQKEEEKQWKEELENIAAEPFARTVDDTRLEEARKAEIRADDPMAAYMAKKKAKEGVKSGKPLKPEYKGPQPKPNRFGIRPGYRWDGNDRGNGWESRIVAKGVDNNYKAELAYKWATADM 629
[Close]
BLAST of mRNA_M-pyrifera_M_contig12972.5805.1 vs. uniprot
Match: A0A6H5KM91_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KM91_9PHAE)

HSP 1 Score: 286 bits (733), Expect = 1.160e-84
Identity = 152/171 (88.89%), Postives = 159/171 (92.98%), Query Frame = 1 
Query: 1186 RVKTSSGYYAGLQSGKDFKVVEQELKRKHDADMKGADKSSSGQGATTVYRDKKGRKLDMLNEFMKQQDARAGKEVEEAKEQFAWGRGKVQKEEEQQWKEELENIAAEPFARTVDDTRLEDARKAEIRPDDPMAAYMAKKKVKERVKSGKPVKPEYKGPAPKPNRFGIRPGY 1698
            RVKTSSGYYAGLQSGKDFKVVEQ LKRKHDA+MKGADK SSGQGA TVYRDKKGRKLDMLNEFMK QDARAGK+VEEAK+QFAWGRGKVQKEEE+QWKEELENIAAEPFARTVDDTRLE+ARKAEIR DDPMAAYMAKKK KERVKSGKP+KPEYKGP PKPNR    P +
Sbjct:  436 RVKTSSGYYAGLQSGKDFKVVEQNLKRKHDAEMKGADKRSSGQGAETVYRDKKGRKLDMLNEFMKSQDARAGKKVEEAKDQFAWGRGKVQKEEEKQWKEELENIAAEPFARTVDDTRLEEARKAEIRADDPMAAYMAKKKAKERVKSGKPLKPEYKGPQPKPNRHVWHPAW 606
[Close]
BLAST of mRNA_M-pyrifera_M_contig12972.5805.1 vs. uniprot
Match: A0A7S2BP57_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BP57_9STRA)

HSP 1 Score: 196 bits (498), Expect = 1.500e-55
Identity = 107/178 (60.11%), Postives = 127/178 (71.35%), Query Frame = 1 
Query: 1282 MKGADKSSSGQGATTVYRDKKGRKLDMLNEFMKQQDARAGKEVEEAKEQFAWGRGKVQKEEEQQWKEELENIAAEPFARTVDDTRLEDARKAEIRPDDPMAAYMAKKKVKERVK--SGKPVKPEYKGPAPKPNRFGIRPGYRWDGNDRSNGWEDKIVAKGVDDNYKAHLAYKWATADM 1809
             K ADKS   +   T+YRDKKGRKLDMLNEFM+QQ  R GKEVEE  EQ  WG+G VQK+EE+  +EEL NIA EPFARTV+D +++   + +I  DDPMAAYM KK+ KE VK  +GKP KP YKGP PKPNRFGI PGYRWDG DR  GWEDK+ A   +        Y+W+T+DM
Sbjct:   11 QKEADKSLGDKQEETIYRDKKGRKLDMLNEFMRQQAIREGKEVEEKAEQEEWGKGTVQKQEEKAHQEELANIANEPFARTVNDPKVDAMYREKIHADDPMAAYMMKKREKEGVKGKNGKPAKPFYKGPKPKPNRFGIPPGYRWDGVDRGTGWEDKVYAYQANKGVNKQAEYEWSTSDM 188
[Close]
BLAST of mRNA_M-pyrifera_M_contig12972.5805.1 vs. uniprot
Match: A0A835ZAF7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAF7_9STRA)

HSP 1 Score: 187 bits (475), Expect = 1.540e-52
Identity = 98/167 (58.68%), Postives = 125/167 (74.85%), Query Frame = 1 
Query: 1309 GQGATTVYRDKKGRKLDMLNEFMKQQDARAGKEVEEAKEQFAWGRGKVQKEEEQQWKEELENIAAEPFARTVDDTRLEDARKAEIRPDDPMAAYMAKKKVKERVKSGKPVKPEYKGPAPKPNRFGIRPGYRWDGNDRSNGWEDKIVAKGVDDNYKAHLAYKWATADM 1809
            GQ A TVYRD++GRKLDML+EFM+QQDAR G   E+A  ++ WGRGKVQKE++++ ++ELENI   PFART +   L++  KA++R DDPMAAYMAKK+ K    SGKP+KP YKGP PKPNRFGI PGYRWDG DR +GWE K+V   +   +K   +Y++  ADM
Sbjct:    1 GQTAETVYRDRRGRKLDMLSEFMRQQDAREGAVREKADAEYEWGRGKVQKEDKERQRDELENIKLAPFARTAE--HLDEELKAQLRSDDPMAAYMAKKQAKTAAASGKPLKPVYKGPPPKPNRFGILPGYRWDGVDRGSGWEQKLVDAQLARRHKGEASYQYGCADM 165
[Close]
BLAST of mRNA_M-pyrifera_M_contig12972.5805.1 vs. uniprot
Match: A0A7S4D5S3_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D5S3_HETAK)

HSP 1 Score: 174 bits (441), Expect = 6.760e-46
Identity = 99/209 (47.37%), Postives = 131/209 (62.68%), Query Frame = 1 
Query: 1186 RVKTSSGYYAGLQSGKDFKVVEQELKRKHDADMKGADKSSSGQGATTVYRDKKGRKLDMLNEFMKQQDARAGKEVEEAKEQFAWGRGKVQKEEEQQWKEELENIAAEPFARTVDDTRLEDARKAEIRPDDPMAAYMAKKKVKERVKSGKPVKPEYKGPAPKP-NRFGIRPGYRWDGNDRSNGWEDKIVAKGVDDNYKAHLAYKWATADM 1809
            R K SSG+ +GLQSG +FK +EQ+++    A++ GAD+  SG+ A TVYRDK+GRKLDML +FM+QQ+A+ GK+  E +EQF WGRG VQK  E+ ++EEL  I A+PFAR  DD +L  A K EI  DDPMAAYM                           NR+G+RPGYRWDG+DR NG+E +++ K  D        Y W+ +DM
Sbjct:   93 RQKMSSGHASGLQSGAEFKEIEQQVRAARAAELAGADEEVSGRNAGTVYRDKRGRKLDMLTQFMEQQEAKDGKKKREEQEQFEWGRGAVQKRRERDFQEELREIQAQPFARYRDDEKLNQAAKEEIHADDPMAAYMLXXXXXXXXXXXXXXXXXXXXXXXXXXNRYGLRPGYRWDGHDRGNGFEARVLGKAADRQVFNERKYNWSVSDM 301
[Close]
BLAST of mRNA_M-pyrifera_M_contig12972.5805.1 vs. uniprot
Match: A0A7S1GEN6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1GEN6_9STRA)

HSP 1 Score: 169 bits (429), Expect = 1.800e-45
Identity = 96/187 (51.34%), Postives = 121/187 (64.71%), Query Frame = 1 
Query: 1192 KTSSGYYAGLQSGKDFKVVEQELKRKHDADMKGADKSSSGQGATTVYRDKKGRKLDMLNEFMKQQDARAGKEVEEAKEQFAWGRGKVQKEEEQQWKEELENIAAEPFARTVDDTRLEDARKAEIRPDDPMAAYMAKKKVKERVKSGKPV-KPEYKGPAPKPNRFGIRPGYRWDGNDRSNGWEDKIVA 1749
            + ++G  AGL  G+D K  +  L+R+    +   D    GQGA TVYRD+KGRKLDML E M+QQD   GK+V +  E F WG G VQK E +   EE+  IA  PFART DD  + D  K++IR  DPMAA M +K+ +   K G P  KP+Y+GPAP PNR+GI PGYRWDG DR NGWE K++A
Sbjct:    1 RMATGERAGLLKGEDMKAEQLALRRREREKLAAMDAEMMGQGAETVYRDRKGRKLDMLQEMMRQQDLAKGKKVAKEAEAFDWGTGAVQKREVEARAEEMAKIAEAPFARTADDKDMNDYLKSQIREGDPMAAAMMRKQRERAAKEGGPGGKPQYRGPAPPPNRYGIAPGYRWDGVDRGNGWERKLLA 187
[Close]
BLAST of mRNA_M-pyrifera_M_contig12972.5805.1 vs. uniprot
Match: A0A7R9U1Z5_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U1Z5_9STRA)

HSP 1 Score: 168 bits (426), Expect = 7.590e-45
Identity = 96/185 (51.89%), Postives = 123/185 (66.49%), Query Frame = 1 
Query: 1198 SSGYYAGLQSGKDFKVVEQELKRKHDADMKGADKSSSGQGATTVYRDKKGRKLDMLNEFMKQQDARAGKEVEEAKEQFAWGRGKVQKEEEQQWKEELENIAAEPFARTVDDTRLEDARKAEIRPDDPMAAYMAKKKVKERVKSGKPVKPEYKGPAPKPNRFGIRPGYRWDGNDRSNGWEDKIVAK 1752
            SSG+ AGL +   FK  E EL+R   A +       SG+ + TVYRD++GRKLDML+EFM+QQ+ +  K        + WG+G  QK+ E++++EELENI  EPFAR  DD RLE  RK E+RPDDPM AY+ K    +R K+GK  K  Y GP P PNRFGI PGYRWDG DR NG+E +++AK
Sbjct:   27 SSGHRAGLHTADSFKRAEDELRRDKAAKLSRMSDELSGKNSETVYRDRQGRKLDMLSEFMRQQEEKESKRXXXXX-XYEWGKGTKQKKMEKEYEEELENIRNEPFARAHDDPRLERMRKEELRPDDPMLAYVQK----QRAKTGKSTKKAYTGPPPPPNRFGIPPGYRWDGVDRGNGFEARVLAK 206
[Close]
BLAST of mRNA_M-pyrifera_M_contig12972.5805.1 vs. uniprot
Match: A0A6V1PRD0_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1PRD0_HETAK)

HSP 1 Score: 174 bits (441), Expect = 1.310e-44
Identity = 99/209 (47.37%), Postives = 131/209 (62.68%), Query Frame = 1 
Query: 1186 RVKTSSGYYAGLQSGKDFKVVEQELKRKHDADMKGADKSSSGQGATTVYRDKKGRKLDMLNEFMKQQDARAGKEVEEAKEQFAWGRGKVQKEEEQQWKEELENIAAEPFARTVDDTRLEDARKAEIRPDDPMAAYMAKKKVKERVKSGKPVKPEYKGPAPKP-NRFGIRPGYRWDGNDRSNGWEDKIVAKGVDDNYKAHLAYKWATADM 1809
            R K SSG+ +GLQSG +FK +EQ+++    A++ GAD+  SG+ A TVYRDK+GRKLDML +FM+QQ+A+ GK+  E +EQF WGRG VQK  E+ ++EEL  I A+PFAR  DD +L  A K EI  DDPMAAYM                           NR+G+RPGYRWDG+DR NG+E +++ K  D        Y W+ +DM
Sbjct:  214 RQKMSSGHASGLQSGAEFKEIEQQVRAARAAELAGADEEVSGRNAGTVYRDKRGRKLDMLTQFMEQQEAKDGKKKREEQEQFEWGRGAVQKRRERDFQEELREIQAQPFARYRDDEKLNQAAKEEIHADDPMAAYMLXXXXXXXXXXXXXXXXXXXXXXXXXXNRYGLRPGYRWDGHDRGNGFEARVLGKAADRQVFNERKYNWSVSDM 422
[Close]
BLAST of mRNA_M-pyrifera_M_contig12972.5805.1 vs. uniprot
Match: W7TD64_9STRA (Bud13 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TD64_9STRA)

HSP 1 Score: 168 bits (426), Expect = 5.200e-43
Identity = 102/207 (49.28%), Postives = 138/207 (66.67%), Query Frame = 1 
Query: 1216 GLQSGKDFKVVEQELKRKHDADM----KGA-DKSSSGQGATTVYRDKKGRKLDMLNEFMKQQDARAGKEVEEAKEQFAWGRGKVQKEEEQQWKEELENIAAEPFARTVDDTRLEDARKAEIRPDDPMAAYMAKKK----VKERVKSGKPVKPEYKGPAPKPNRFGIRPGYRWDGNDRSNGWEDKIVAKGVDDNYKAHLAYKWATADM 1809
            GL++G +F+    EL+ + DA+     +GA D   +GQ A TV RD++GRKL+ML+EF+ Q+  + GK  +EAKE++ WGRGKVQKE+++  + ELE+I   PFAR   D +LE ARK EIR DDPMAAYM +K+     +E  +SGK +KPEYKGP PKPNRF IRPGYRWDG DR NG+E +   +  +   K      W  +D+
Sbjct:  168 GLKTGAEFRA---ELEAQKDAEAHAWAEGAKDAGVTGQHAETVVRDRRGRKLEMLSEFLNQEAYKEGKAAKEAKEEYEWGRGKVQKEKDEDHRRELEDIKNAPFARYESDLKLERARKEEIRADDPMAAYMLQKQRDALAQEATRSGKVLKPEYKGPPPKPNRFNIRPGYRWDGIDRGNGFEARWFKRQSELVTKHERDRAWGMSDL 371
[Close]
BLAST of mRNA_M-pyrifera_M_contig12972.5805.1 vs. uniprot
Match: A0A7S2HC66_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HC66_9STRA)

HSP 1 Score: 159 bits (403), Expect = 7.190e-42
Identity = 82/168 (48.81%), Postives = 113/168 (67.26%), Query Frame = 1 
Query: 1318 ATTVYRDKKGRKLDMLNEFMKQQDARAGKEVEEAKEQFAWGRGKVQKEEEQQWKEELENIAAEPFARTVDDTRLEDARKAEIRPDDPMAAYMAKKKVKERVK----SGKPVKPEYKGPAPKPNRFGIRPGYRWDGNDRSNGWEDKIVAKGVDDNYKAHLAYKWATADM 1809
            +TT+ RD++G+KLD LNEFMK Q   AG++  + +EQ  WG+G VQK ++++++ EL NI  EPFAR+ +D +++   + +I  DDPMAAYM KK+  E  K    +GKP +P YKGP PKPNRF I PGYRWDG DR  GWE KI+          + AY+W+ A+M
Sbjct:   25 STTIVRDRRGKKLDALNEFMKAQAKSAGEKAADDEEQLEWGKGSVQKNQDKEYEAELANIKNEPFARSRNDPKVDQMYRNKIHSDDPMAAYMLKKRAAEADKLSKHAGKPARPVYKGPTPKPNRFNIHPGYRWDGRDRGTGWEAKILDHAAHSGVMKNAAYEWSVAEM 192
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig12972.5805.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FT40_ECTSI4.440e-11791.35Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KM91_9PHAE1.160e-8488.89Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S2BP57_9STRA1.500e-5560.11Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A835ZAF7_9STRA1.540e-5258.68Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S4D5S3_HETAK6.760e-4647.37Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S1GEN6_9STRA1.800e-4551.34Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
A0A7R9U1Z5_9STRA7.590e-4551.89Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A6V1PRD0_HETAK1.310e-4447.37Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
W7TD64_9STRA5.200e-4349.28Bud13 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W... [more]
A0A7S2HC66_9STRA7.190e-4248.81Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig12972contigM-pyrifera_M_contig12972:1566..7310 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score380.2
Seed ortholog evalue1.7e-102
Seed eggNOG ortholog2880.D7FT40
KEGG koko:K13100,ko:K13106
Hectar predicted targeting categoryother localisation
EggNOG free text desc.RNA splicing
EggNOG OGsKOG2654@1,KOG2654@2759
Ec32 ortholog descriptionBud13
Ec32 orthologEc-04_002730.1
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03041
Exons7
Model size1912
Cds size1665
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815804.0287795-UTR-M-pyrifera_M_contig12972:1565..16651622815804.0287795-UTR-M-pyrifera_M_contig12972:1565..1665Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig12972 1566..1665 -
1692277577.7296226-UTR-M-pyrifera_M_contig12972:1565..16651692277577.7296226-UTR-M-pyrifera_M_contig12972:1565..1665Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig12972 1566..1665 -
1622815804.1564023-UTR-M-pyrifera_M_contig12972:7163..73101622815804.1564023-UTR-M-pyrifera_M_contig12972:7163..7310Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig12972 7164..7310 -
1692277577.8196824-UTR-M-pyrifera_M_contig12972:7163..73101692277577.8196824-UTR-M-pyrifera_M_contig12972:7163..7310Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig12972 7164..7310 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815804.043315-CDS-M-pyrifera_M_contig12972:1665..18011622815804.043315-CDS-M-pyrifera_M_contig12972:1665..1801Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12972 1666..1801 -
1692277577.7466455-CDS-M-pyrifera_M_contig12972:1665..18011692277577.7466455-CDS-M-pyrifera_M_contig12972:1665..1801Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12972 1666..1801 -
1622815804.0637417-CDS-M-pyrifera_M_contig12972:2438..25151622815804.0637417-CDS-M-pyrifera_M_contig12972:2438..2515Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12972 2439..2515 -
1692277577.7550974-CDS-M-pyrifera_M_contig12972:2438..25151692277577.7550974-CDS-M-pyrifera_M_contig12972:2438..2515Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12972 2439..2515 -
1622815804.0851634-CDS-M-pyrifera_M_contig12972:2816..30081622815804.0851634-CDS-M-pyrifera_M_contig12972:2816..3008Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12972 2817..3008 -
1692277577.7661223-CDS-M-pyrifera_M_contig12972:2816..30081692277577.7661223-CDS-M-pyrifera_M_contig12972:2816..3008Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12972 2817..3008 -
1622815804.099325-CDS-M-pyrifera_M_contig12972:3966..41011622815804.099325-CDS-M-pyrifera_M_contig12972:3966..4101Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12972 3967..4101 -
1692277577.775481-CDS-M-pyrifera_M_contig12972:3966..41011692277577.775481-CDS-M-pyrifera_M_contig12972:3966..4101Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12972 3967..4101 -
1622815804.1131423-CDS-M-pyrifera_M_contig12972:5468..56681622815804.1131423-CDS-M-pyrifera_M_contig12972:5468..5668Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12972 5469..5668 -
1692277577.7925186-CDS-M-pyrifera_M_contig12972:5468..56681692277577.7925186-CDS-M-pyrifera_M_contig12972:5468..5668Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12972 5469..5668 -
1622815804.1254828-CDS-M-pyrifera_M_contig12972:5914..67811622815804.1254828-CDS-M-pyrifera_M_contig12972:5914..6781Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12972 5915..6781 -
1692277577.802655-CDS-M-pyrifera_M_contig12972:5914..67811692277577.802655-CDS-M-pyrifera_M_contig12972:5914..6781Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12972 5915..6781 -
1622815804.1420407-CDS-M-pyrifera_M_contig12972:7105..71631622815804.1420407-CDS-M-pyrifera_M_contig12972:7105..7163Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12972 7106..7163 -
1692277577.8109837-CDS-M-pyrifera_M_contig12972:7105..71631692277577.8109837-CDS-M-pyrifera_M_contig12972:7105..7163Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12972 7106..7163 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig12972.5805.1prot_M-pyrifera_M_contig12972.5805.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig12972 1666..7163 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig12972.5805.1

>prot_M-pyrifera_M_contig12972.5805.1 ID=prot_M-pyrifera_M_contig12972.5805.1|Name=mRNA_M-pyrifera_M_contig12972.5805.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=555bp
MEALDKRRVNKAWQEEETAEEKPAVVLDDPEDDKKALSGSWTTVGGGDGG
GAGDGSDASPPRRRRRHDSSDEDASPPRRNPRNGRSGGRGGGGGGDAGDE
GDASPPRRRRRHDSSDEDASPPRRNPRNGRNGGRGEGGGGGDAGDEGDAS
PPRRRRRHDGSDEDASPLRRNGRSGARGGRGRGDAGDGDDASPPRRGRGR
DAGDSSPPRRRGGRNAGDSSPPRRRRGGDTRDSSPPRRERGAHAGDSSPP
RRGRGGGWRDSSPPRRGRDGDAGNSSPPRRGKDGDSSPPRRGRGGESGRG
ERDGGGGRRDRRRRHDSSDDGQGGSGGGAGGGGDGGGGGSGGGEGDRVKT
SSGYYAGLQSGKDFKVVEQELKRKHDADMKGADKSSSGQGATTVYRDKKG
RKLDMLNEFMKQQDARAGKEVEEAKEQFAWGRGKVQKEEEQQWKEELENI
AAEPFARTVDDTRLEDARKAEIRPDDPMAAYMAKKKVKERVKSGKPVKPE
YKGPAPKPNRFGIRPGYRWDGNDRSNGWEDKIVAKGVDDNYKAHLAYKWA
TADM*
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mRNA from alignment at M-pyrifera_M_contig12972:1566..7310-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig12972.5805.1 ID=mRNA_M-pyrifera_M_contig12972.5805.1|Name=mRNA_M-pyrifera_M_contig12972.5805.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=5745bp|location=Sequence derived from alignment at M-pyrifera_M_contig12972:1566..7310- (Macrocystis pyrifera P11B4 male)
GGGGGCGACGACGACGGCAAGAAAAAGAGAAGGAAAAAGAAGGTTACTTC
GTCCAGTTCGGGCGGCGGTGGCGGCAGGGATGCGGGGGTGAGGTCCGCCG
GGGGGAGCCGGGGCGGCGGCCTGCGCATCATCGACGACGAGGCTGACATG
GAAGCGCTGGACAAGAGGAGAGTCAACAAGGCTTGGCAGGAGGAGGAGAC
GGCAGGTGCGGAGCTCTCGTGTGTACCTTCACATGCTCGCCTTACTTGCT
GGTATATAACATGAACAGGTAGTGTTGATAGTAGTTGTAGTAGTAGCAGT
ACTTCTGTATTGCGCTACTGGTAAGTATTTTATAAGGTTATCATCGCCGT
TACGCAGCAATGTCTTACAGGCGCAGCAGTTACAACAGCAGCATGATACG
CATTACGAGGCACTGGTATGCACTACCGTATTCTCCTAATCTCATGACTT
CCTTCCCCCCTCATCACGTCTACTTCTTCGTCGAATACTCTCAACTTATT
TGTTGCCGCCACGCCGCTGGATGCTGAAGAGGAGAAACCCGCGGTTGTGC
TGGACGACCCCGAGGACGACAAGAAGGCCCTGTCGGGCTCGTGGACTACG
GTGGGAGGAGGAGACGGTGGTGGTGCCGGGGATGGGAGTGACGCGTCCCC
GCCAAGGAGGAGAAGGCGGCACGATAGCTCAGACGAGGACGCCTCCCCTC
CACGCCGAAACCCTCGAAACGGTCGCAGCGGAGGACGAGGAGGAGGAGGC
GGTGGTGATGCAGGGGATGAGGGTGACGCGTCCCCGCCAAGGAGGAGAAG
GCGGCACGATAGCTCAGACGAGGACGCCTCCCCTCCACGCCGAAACCCCC
GAAACGGTCGCAACGGAGGACGAGGAGAAGGAGGAGGCGGTGGTGATGCC
GGGGATGAGGGTGACGCGTCCCCGCCAAGGAGGAGAAGGCGGCACGATGG
CTCAGACGAAGACGCCTCCCCTCTGCGCCGAAACGGTCGCAGCGGAGCGA
GAGGAGGAAGAGGCCGCGGTGATGCCGGGGACGGGGATGACGCGTCCCCT
CCGAGGCGGGGGAGAGGCAGGGACGCGGGGGACTCGTCCCCTCCGAGACG
GAGGGGAGGCAGGAACGCTGGGGACTCGTCCCCTCCGAGGCGGAGGAGAG
GCGGGGATACAAGGGACTCGTCCCCTCCGAGACGAGAGAGAGGCGCGCAC
GCGGGGGACTCGTCCCCTCCGAGACGGGGGAGAGGCGGGGGTTGGCGGGA
CTCGTCCCCGCCAAGACGGGGGAGAGACGGGGACGCGGGAAACTCATCCC
CCCCGAGGCGAGGGAAAGACGGGGACTCGTCCCCTCCTAGGCGAGGAAGA
GGCGGGGAGAGCGGGCGCGGTGAGAGGGACGGGGGTGGCGGCAGGCGTGG
CGGTTCGAACGACGGGGGCGGGGACCGACGGGATACGTCCCCCCCCCGGG
GGAAGAGGCGTTCGAGGCACGACAGCAGCGATTCTGAAGAGGCTGCGACA
ACGGCGACCGGGAGGAAAGACAGGAACAGTTCGCCTCCTAGGAAGAAGAG
GGGGACGGGGACGGGGGGCGGGGGGGGCGGCGATGCGTCCCCGCGCAGGC
GAGGGAAGCGTGATTCTCTGGGGGAGCAGGATGGCGGGAGAGGCGACAGG
AGACGGCGGCACGATTCATCCGACGATGGGCAAGGAGGTAGTGGGGGCGG
GGCCGGCGGGGGTGGGGATGGGGGCGGAGGCGGTAGCGGGGGTGGCGAGG
GTGATCGCGTCAAGACTTCCTCCGGGTACTACGCAGGCCTGCAGTCTGGC
AAGGACTTCAAGGTCGTGGAGCAGGAGCTGAAGCGCAAGCACGTGAGGGT
TTTCATGTTTTCCTGTTGTCCCGCCCGTTCTTTTGGACTCTCTCTCACCG
TTGTCGAGCCAAAAATTAGCTCTGAAAAATCGTCCGAAGGGGATGTGGTA
TGTCGTCACCCGTGTGATACGGTAGTTAGGCAGGTACCCGTCAGCATCGA
AATATACACCAGGTTTCAGGTAGCATATAAGCTGAGGAGCCCCATTGATG
CGAAATGTTTTGGGGCTCATAATGTGCATCCTCTGCCACCGTAGCCGGGC
TCTTGCCCCGGAGGTTCTACCGGGCGTACAGTAGAAGTTGCCAACGAGCT
ATCGTATATTAATAGCCCCCCAGTATCATGCCAGGTACCCGTCTCCACGC
TACGTGTATTCCGTATCACACCGGGTGATAAGAATGCACACCCCCTCGGA
CGAATTTCAAAAGTTGATTTCGTCTCGACAACGGGAAAAGTGTGAAAAAC
GCCGAGCGATTGCGTTTCTTATGGAAATATGTCGACGAGATATTCCCAAA
GCCGCCATTTTCGTTGGGTGCGCCCTATAGACCCTTGAGGCATGTTTTGG
AGAAAGTCGACTCTGGAATCTGGGATCCGTCGCAGGGGGTGTTTTATCTT
ACCACCCGTGTGATACGGTAATACTGGTGCTATCGTATGATATTTTTGAG
AGTATACCCGGGTATATACCCGGGTAGTCGGGTAGCTTCAGTATTGACCC
CAATACCATACCCGCGAAACTACCGTACCTACCTTACTACTCTCACCCTA
GCATCCGGTAGGGGTGTTCCCTACTGCATCTTGTTCTGTCAGTCCCCGCT
CGAAGAGCTGCGTATATACATCACCCAGACAATGGCTTTCAAGAAAGGCG
TACGCTTATAGTTGGCCGGAGAAGCAAACCCCATATCCTACGAGGTCCAT
CTTGCGAACCTCGGACAGACAGATCATCCACAGATCATTCTCACTTCATG
ATCTGCGATAGATATTTCAGGGCAGATATATTTAATCCTGATTTGTATGA
TCTGTATGATCCAGCTCATGTTGCAGGGTAGGAGCCGTACGATCTGCATG
ATCTATGTAGGACATAACTCTTGGGTGAGATCTGTGCTATGCAGTTCTTG
CACAACATACCATTAAAGGAAGGTCTTGTTATGATCTAGATGATCTATGA
TATCCACTGTAGATGATGACCTGTCTGAGGTGTGAAATATTGTACAAACA
AACGTACCAGGTACGATATTGGGTAATTCCTCGGTTGAGAGCCCCATCAG
TCAGAAATACTTCCTCAAAAGGCCGAAAAGGGCCACCTCTATCGTAGCTC
GCGTGTTAACGAGAATGCTCCTGTGCGCGATGTGTTTGGGCTGCCCGATA
CCTCTCCAGGACGCCGATATGAAGGGAGCGGACAAGTCTAGCTCGGGACA
GGGCGCCACGACTGTCTACCGCGACAAGAAGGGGCGCAAGCTGGACATGC
TCAACGAGTTCATGAAGCAGCAGGATGCGAGGGCAGGAAAGGAGGTGAGC
GGGATCTTTTTCCAAGCCTGAGCCTGCATATCTGTCTGTCTGTCTGTCTG
TCTGTCTGTCTGTATGTCTGCATGTATGTGTATTTATCTCTCTGCGCGTG
CCTGTGTGTATGTTTGTCTCTGTGTGTATTTTTCTCTCTCGCTTTATTTT
TGGTGTTTTCCCTTCTGCGTGTGTATGTGTGTCTCTGCCTGTCTTTCTGT
CTTGTCTGTGTGTGTATTTTTCTCTCTCTCGCTCTATTTTTATTTATTTC
CCTTCTGTGTGTGTCTCTGTCTGTCTGTCTGTCTGTCTGTCTGTCTGTCT
GTCTGTGTGTCTTGTCTCTGTGTGTATTTTTTTCTCTCTCGCTCTATTTT
TGGTTTATTTCCCTTCCGGAGGTTTTCCCTTTCCTTTTTCGATTTTCTGA
TCCCCTTATTTTTAGTGACCTTTCCCTTCTTGGTGTCACCCTTCCCTCTT
GGATGCTATCGTTTCCTTTGTTTTGTCACCCTTCCCTTATTGATGTTGCG
CCTCCCTCGTTTGTGCTACCCTTGCCTCATTGATGGTTCCTCCCTTTCTA
TGTTACTGTGCCCTTCCCTCTTTCGTACTACAGTGCCCTTCCCTTGTTAC
TGCTGTGCTGTACCTTTTTGGTGTTACTATACCTTTTTGATGTCTCTGCA
CCTTTTTATGTTACCGTGCCCTTCCCTGATGCTGCTGCTTCCTTTTTTGG
TGTCACTTCACCCTTTTCCCTGTCGGGTGTTTTCTGTACCCTTCCCTTTT
TTGTGTTACTGTACCTTTTCGAAATCACTGTACCTTTTTGTTCCACTGTA
CCCTTCCCTGATGTCGCCTCGTATTTCCTTTTTGATGTTAGTTCACCCTT
GATGTCACTGTGTACTACTCTCCCTTTGTTGATGTTACTCGGCGACCACA
TCCTGACGTACCGACTGTACCACCGCTATCACAACTTTTCCGAAAATTCA
AGGTCGAGGAAGCCAAGGAGCAATTCGCGTGGGGGCGCGGCAAGGTGCAG
AAGGAGGAGGAGCAGCAGTGGAAGGAGGAGCTGGAGAACATCGCCGCCGA
GCCCTTCGCCCGCACGGTGGACGACACGCGCCTGGAGGACGCCAGGAAGG
CGGAGATACGTCCGGACGATCCCATGGCGGCTTACATGGCGAAGGTGGGG
AGGAGGGATGACGGTAGGGGCATCGATAACGCGAACCGCGAAACTCGAAC
CGCGAAACGCGATTCGCAAAGACGCGAACCGCAGAACGCGGACCGTGAAC
CCACCCACCCACCCATTCCCCCGCGCACCCACCCACCCACCCACTCCACC
CCACCCTACCCACCCGCCCACCCACACCCATACACACTCTCGTGTGTAAC
GTTTTGACGTGTTGACATGCCGTTTGTGACAGTGACCTCGTTTTTTTGTT
TTTTTATTTTTTTTTCCGCGTTTGTATTTATTACCGTGTCCGCAGAAAAA
GGTGAAGGAAAGGGTGAAGAGCGGGAAGCCCGTGAAGCCGGAGTACAAGG
GACCGGCACCGAAACCGAACAGGTGTGAATACGTACGGCGCGTTGGTTTT
TTTTTGTGCGCGTGTGATGGCGTGAGCGTTTTGGCGATAGCGTGATAGCG
TGATAGCGTGATAGCGTGATCGTGATATAGCTTTAACGTGATAGCGTGAG
CGTGATAGCGTGAGCGTGATAGCATAACCGTGATAGGGTAAGCGTGATAG
CTTGACCGTGATAATTTTAGCGTGATAGCATGAACGTGATAGCCTGGGCG
TGATAGCGTGAGCATGATAGCGCAAGCATGATAGCGCAAGCGTGATAGCG
TGATGACGTGATAGCGTTAGCGTGATAGCGTAAGCATGATAGCGCAAGCG
TGATAGCGCAAGCGTGATAGCGCAAGCGTGATAGCCCGAGCGTAATTGCG
AGAGCGCGCTAGCGTGAGCGTGATGGCTCAGCGCGGGCGTGATAGGAGCA
GATCGCTCGCCTGGTCGAAGCCGCTATTATCCGATGTTTGTCCGCAATGT
TTGCCCGCCGCCAACAATCCTCGGTCGGTCCGAAACGGGGCGGGAGGGAG
GGGGGGGGGATGGAAAGCGGCTTCGTGACTTGTTCCATAGTTCCCGCTGG
TTTGCTCCCTCTGAGCCACTGCAGTGTTTGGTGTCCGTCAACCATATTCT
GTTGGACAGGTTTGGCATCCGGCCGGGGTACCGGTGGGATGGTAACGACC
GCAGCAATGGTTGGGAAGACAAGATCGTAGCCAAGGGGGTGGACGACAAC
TACAAGGCACACCTCGCCTACAAGTGGGCCACGGCGGACATGTAGAGTCG
CGGTGGCGTTGTTGAAGGGGGGGGGAAGGAGTGGGGCAGCACCCCGAAGA
GTTGGCACCTCTTGCGGTGACGGTGGTAACACAGCAGTAGTGATG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig12972:1566..7310-

>mRNA_M-pyrifera_M_contig12972.5805.1 ID=mRNA_M-pyrifera_M_contig12972.5805.1|Name=mRNA_M-pyrifera_M_contig12972.5805.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=3330bp|location=Sequence derived from alignment at M-pyrifera_M_contig12972:1566..7310- (Macrocystis pyrifera P11B4 male)
ATGGAAGCGCTGGACAAGAGGAGAGTCAACAAGGCTTGGCAGGAGGAGGA
GACGGCAGATGGAAGCGCTGGACAAGAGGAGAGTCAACAAGGCTTGGCAG
GAGGAGGAGACGGCAGAGGAGAAACCCGCGGTTGTGCTGGACGACCCCGA
GGACGACAAGAAGGCCCTGTCGGGCTCGTGGACTACGGTGGGAGGAGGAG
ACGGTGGTGGTGCCGGGGATGGGAGTGACGCGTCCCCGCCAAGGAGGAGA
AGGCGGCACGATAGCTCAGACGAGGACGCCTCCCCTCCACGCCGAAACCC
TCGAAACGGTCGCAGCGGAGGACGAGGAGGAGGAGGCGGTGGTGATGCAG
GGGATGAGGGTGACGCGTCCCCGCCAAGGAGGAGAAGGCGGCACGATAGC
TCAGACGAGGACGCCTCCCCTCCACGCCGAAACCCCCGAAACGGTCGCAA
CGGAGGACGAGGAGAAGGAGGAGGCGGTGGTGATGCCGGGGATGAGGGTG
ACGCGTCCCCGCCAAGGAGGAGAAGGCGGCACGATGGCTCAGACGAAGAC
GCCTCCCCTCTGCGCCGAAACGGTCGCAGCGGAGCGAGAGGAGGAAGAGG
CCGCGGTGATGCCGGGGACGGGGATGACGCGTCCCCTCCGAGGCGGGGGA
GAGGCAGGGACGCGGGGGACTCGTCCCCTCCGAGACGGAGGGGAGGCAGG
AACGCTGGGGACTCGTCCCCTCCGAGGCGGAGGAGAGGCGGGGATACAAG
GGACTCGTCCCCTCCGAGACGAGAGAGAGGCGCGCACGCGGGGGACTCGT
CCCCTCCGAGACGGGGGAGAGGCGGGGGTTGGCGGGACTCGTCCCCGCCA
AGACGGGGGAGAGACGGGGACGCGGGAAACTCATCCCCCCCGAGGCGAGG
GAAAGACGGGGACTCGTCCCCTCCTAGGCGAGGAAGAGGCGGGGAGAGCG
GGCGCGGTGAGAGGGACGGGGGTGGCGGCAGGCAGGAGAAACCCGCGGTT
GTGCTGGACGACCCCGAGGACGACAAGAAGGCCCTGTCGGGCTCGTGGAC
TACGGTGGGAGGAGGAGACGGTGGTGGTGCCGGGGATGGGAGTGACGCGT
CCCCGCCAAGGAGGAGAAGGCGGCACGATAGCTCAGACGAGGACGCCTCC
CCTCCACGCCGAAACCCTCGAAACGGTCGCAGCGGAGGACGAGGAGGAGG
AGGCGGTGGTGATGCAGGGGATGAGGGTGACGCGTCCCCGCCAAGGAGGA
GAAGGCGGCACGATAGCTCAGACGAGGACGCCTCCCCTCCACGCCGAAAC
CCCCGAAACGGTCGCAACGGAGGACGAGGAGAAGGAGGAGGCGGTGGTGA
TGCCGGGGATGAGGGTGACGCGTCCCCGCCAAGGAGGAGAAGGCGGCACG
ATGGCTCAGACGAAGACGCCTCCCCTCTGCGCCGAAACGGTCGCAGCGGA
GCGAGAGGAGGAAGAGGCCGCGGTGATGCCGGGGACGGGGATGACGCGTC
CCCTCCGAGGCGGGGGAGAGGCAGGGACGCGGGGGACTCGTCCCCTCCGA
GACGGAGGGGAGGCAGGAACGCTGGGGACTCGTCCCCTCCGAGGCGGAGG
AGAGGCGGGGATACAAGGGACTCGTCCCCTCCGAGACGAGAGAGAGGCGC
GCACGCGGGGGACTCGTCCCCTCCGAGACGGGGGAGAGGCGGGGGTTGGC
GGGACTCGTCCCCGCCAAGACGGGGGAGAGACGGGGACGCGGGAAACTCA
TCCCCCCCGAGGCGAGGGAAAGACGGGGACTCGTCCCCTCCTAGGCGAGG
AAGAGGCGGGGAGAGCGGGCGCGGTGAGAGGGACGGGGGTGGCGGCAGGC
GCGACAGGAGACGGCGGCACGATTCATCCGACGATGGGCAAGGAGGTAGT
GGGGGCGGGGCCGGCGGGGGTGGGGATGGGGGCGGAGGCGGTAGCGGGGG
TGGCGAGGGTGATCGCGTCAAGACTTCCTCCGGGTACTACGCAGGCCTGC
AGTCTGGCAAGGACTTCAAGGTCGTGGAGCAGGAGCTGAAGCGCAAGCAC
GCGACAGGAGACGGCGGCACGATTCATCCGACGATGGGCAAGGAGGTAGT
GGGGGCGGGGCCGGCGGGGGTGGGGATGGGGGCGGAGGCGGTAGCGGGGG
TGGCGAGGGTGATCGCGTCAAGACTTCCTCCGGGTACTACGCAGGCCTGC
AGTCTGGCAAGGACTTCAAGGTCGTGGAGCAGGAGCTGAAGCGCAAGCAC
GACGCCGATATGAAGGGAGCGGACAAGTCTAGCTCGGGACAGGGCGCCAC
GACTGTCTACCGCGACAAGAAGGGGCGCAAGCTGGACATGCTCAACGAGT
TCATGAAGCAGCAGGATGCGAGGGCAGGAAAGGAGGACGCCGATATGAAG
GGAGCGGACAAGTCTAGCTCGGGACAGGGCGCCACGACTGTCTACCGCGA
CAAGAAGGGGCGCAAGCTGGACATGCTCAACGAGTTCATGAAGCAGCAGG
ATGCGAGGGCAGGAAAGGAGGTCGAGGAAGCCAAGGAGCAATTCGCGTGG
GGGCGCGGCAAGGTGCAGAAGGAGGAGGAGCAGCAGTGGAAGGAGGAGCT
GGAGAACATCGCCGCCGAGCCCTTCGCCCGCACGGTGGACGACACGCGCC
TGGAGGACGCCAGGAAGGCGGAGATACGTCCGGACGATCCCATGGCGGCT
TACATGGCGAAGGTCGAGGAAGCCAAGGAGCAATTCGCGTGGGGGCGCGG
CAAGGTGCAGAAGGAGGAGGAGCAGCAGTGGAAGGAGGAGCTGGAGAACA
TCGCCGCCGAGCCCTTCGCCCGCACGGTGGACGACACGCGCCTGGAGGAC
GCCAGGAAGGCGGAGATACGTCCGGACGATCCCATGGCGGCTTACATGGC
GAAGAAAAAGGTGAAGGAAAGGGTGAAGAGCGGGAAGCCCGTGAAGCCGG
AGTACAAGGGACCGGCACCGAAACCGAACAGAAAAAGGTGAAGGAAAGGG
TGAAGAGCGGGAAGCCCGTGAAGCCGGAGTACAAGGGACCGGCACCGAAA
CCGAACAGGTTTGGCATCCGGCCGGGGTACCGGTGGGATGGTAACGACCG
CAGCAATGGTTGGGAAGACAAGATCGTAGCCAAGGGGGTGGACGACAACT
ACAAGGCACACCTCGCCTACAAGTGGGCCACGGCGGACATGTAGGTTTGG
CATCCGGCCGGGGTACCGGTGGGATGGTAACGACCGCAGCAATGGTTGGG
AAGACAAGATCGTAGCCAAGGGGGTGGACGACAACTACAAGGCACACCTC
GCCTACAAGTGGGCCACGGCGGACATGTAG
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