mRNA_M-pyrifera_M_contig12969.5801.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig12969.5801.1 vs. uniprot
Match: A0A6H5K5X7_9PHAE (MRG domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K5X7_9PHAE) HSP 1 Score: 404 bits (1039), Expect = 4.000e-140 Identity = 216/257 (84.05%), Postives = 233/257 (90.66%), Query Frame = 1
Query: 1 VIKLKPSGEQFTYFLHYMGWNSRWDKWVLESDLMAAGPEALEMQKQLKEKQKKDKVTAAKRKEDQKIKEQVXXXXXXTKRARVDIKKDTEDDTGVAEVKVAMPFTLKKQLMTDWENVTQEPRRLVKLPRELTAANVMSQYMESKADRSTPPQIARAQELIDGVRIYFDKALPLILLYRQERRQYDLIIQKHPKKSPSEIYGAEHLLRAFVRLPQSLAQSALAAAEVTQVQKLLGDFLRFMQKNHATFFVQEYEEEEP 771
VIKLKPSGEQFTYFLHYMGWNSRWDKWV+ESDLMAAGPEALEMQ+QLK+K+KK KV AAKRKEDQ XXXXXX KRARVD+KKDTEDD+GV EVKVAMPFTLKKQL+TDWE+VTQEPRRLVKLPRE+TAA+VM+QYM+SKA+R TP Q ARAQEL+DGVRIYFDKALPLILLYRQER QYD+ +QK P KSPSEIYGAEHLLR FVRLPQ LAQSAL EVTQVQKLL DFLRFMQKNHA FFVQEYE+EEP
Sbjct: 37 VIKLKPSGEQFTYFLHYMGWNSRWDKWVVESDLMAAGPEALEMQQQLKDKKKKAKVNAAKRKEDQXXXXXXXXXXXXXKRARVDVKKDTEDDSGVTEVKVAMPFTLKKQLVTDWEHVTQEPRRLVKLPREVTAADVMAQYMDSKANRGTPQQTARAQELMDGVRIYFDKALPLILLYRQERTQYDITVQKLPGKSPSEIYGAEHLLRVFVRLPQLLAQSALTPPEVTQVQKLLADFLRFMQKNHAAFFVQEYEDEEP 293
BLAST of mRNA_M-pyrifera_M_contig12969.5801.1 vs. uniprot
Match: A0A836CM09_9STRA (Putative chromatin binding protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CM09_9STRA) HSP 1 Score: 221 bits (563), Expect = 9.100e-68 Identity = 128/267 (47.94%), Postives = 178/267 (66.67%), Query Frame = 1
Query: 1 VIKLKPSGE-QFTYFLHYMGWNSRWDKWVLESDLMAAGPEALEMQKQLKE--KQKKDKVTAAKRKE------------DQKIKEQVXXXXXXTKRARVDIKKDTEDDTGVAEVKVAMPFTLKKQLMTDWENVTQEPRRLVKLPRELTAANVMSQYMESKADRSTPPQIARAQELIDGVRIYFDKALPLILLYRQERRQYDLIIQKHPKKSPSEIYGAEHLLRAFVRLPQSLAQSALAAAEVTQVQKLLGDFLRFMQKNHATFFVQEY 756
++KLK + + + YF+HY+GWNSRWDKW E +LM GPE+ E+QK+LK+ KQ++ AA RK XXXX K+ R+D K TEDD+ +A++K+ +PFTLK+QL+ DWENVTQEPR L+ LPR TAA+V+ ++ESK T Q+AR +EL+DG+R+YFD+ALPLILLY ER + ++ + ++ SE+YGAEHLLR F +LP LAQ+ L + EV Q+Q LG+FL++MQKN F +Y
Sbjct: 32 IMKLKQTDDGKHHYFVHYLGWNSRWDKWSEEQELMPDGPESEELQKRLKDEIKQRQGAPKAAVRKSISGGGXXXXXXXXXXXXXXXXXXXAARKKPRIDTKAATEDDSELAQIKLPIPFTLKRQLVQDWENVTQEPRCLLPLPRARTAAHVLDAFIESKRGACTAAQLARFRELVDGLRLYFDRALPLILLYAHEREHHAAVVAHNKGRAASELYGAEHLLRLFTKLPALLAQTNLNSNEVGQLQAKLGEFLKYMQKNAGELFHGDY 298
BLAST of mRNA_M-pyrifera_M_contig12969.5801.1 vs. uniprot
Match: A0A7S2RY99_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RY99_9STRA) HSP 1 Score: 197 bits (501), Expect = 1.450e-58 Identity = 108/251 (43.03%), Postives = 159/251 (63.35%), Query Frame = 1
Query: 7 KLKPSGEQFTYFLHYMGWNSRWDKWVLESDLMAAGPEALEMQKQLKEKQKKDKVTAAKRKEDQKIKEQVXXXXXXTKRARVDIKKDTEDDT-GVAEVKVAMPFTLKKQLMTDWENVTQ-EPRRLVKLPRELTAANVMSQYMESKADRSTPPQIARAQELIDGVRIYFDKALPLILLYRQERRQYDLIIQKHPKKSPSEIYGAEHLLRAFVRLPQSLAQSALAAAEVTQVQKLLGDFLRFMQKNHATFFVQE 753
K++ G+ YF+HY GW+ +WD+WV S L+ GP A +M K+L ++++ + TAA+ K + + E+ K+AR+D ++D E G E+K+ +PFTLKK+L+ DWE +TQ P ++V LPR ++ +Y+ESK +RS+ R EL G+R YFD ALP+ LLYRQER QY +Q HP + SE+YGAEHLLR F +LPQ L ++ LA+ E Q+Q LG+F ++MQ+ F QE
Sbjct: 54 KVRRVGQDGQYFIHYQGWSKKWDRWVHCSLLLKEGPAADKMSKKLMAEEQQRQETAARLKREARADEK---SSQEKKKARIDHQRDVEAPAQGTFELKLPLPFTLKKKLVEDWERITQTSPGQVVPLPRTPCVKGIIDEYLESKKERSSSQNHQRLTELFGGLRTYFDAALPITLLYRQERAQYYQYVQDHPDATMSEVYGAEHLLRLFTKLPQILGRARLASVEAAQLQTNLGEFFKYMQRQATDLFTQE 301
BLAST of mRNA_M-pyrifera_M_contig12969.5801.1 vs. uniprot
Match: A0A7S2GFK6_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2GFK6_9STRA) HSP 1 Score: 184 bits (466), Expect = 1.550e-53 Identity = 105/240 (43.75%), Postives = 159/240 (66.25%), Query Frame = 1
Query: 73 DKWVLESDLMAAGPEALEMQKQLKEKQKKDKVTAAKRKEDQKIK----EQVXXXXXXTKRARVDIKKDTED-DTGVAEVKVAMPFTLKKQLMTDWENVTQ-EPRRLVKLPRELTAANVMSQYMESKADRSTPPQIARAQELIDGVRIYFDKALPLILLYRQERRQYDLIIQKHPKKSPSEIYGAEHLLRAFVRLPQSLAQSALAAAEVTQVQKLLGDFLRFMQKNHATFFVQEYEEEEPV 774
DKWV S +MA GPEA + K+L + A K++E+ K+K E+ K+ R+D+ + E D ++K+ +PFTLKKQL+ DWE+++Q +P LV LPR+ T ++V+S+++E KA R++ + EL++G+RIYFD +LP+ILLY QER+Q+ I ++HP S+IYGAEHLLR F +LP L ++ LA+ E Q+Q LG+FL+++QKNHAT F++ YEE P+
Sbjct: 1 DKWVHASLMMAEGPEAEKYAKKLAD--------AEKKREEAKVKARAGEKEAAGQSRRKKPRIDVGRALEAADETAPQIKLPLPFTLKKQLVDDWESISQMDPHMLVTLPRKPTVSDVISEFLEFKAKRTSTAKQQHLTELLEGLRIYFDNSLPVILLYPQERQQFADITKQHPDVPVSKIYGAEHLLRLFTKLPHVLGKARLASVESAQLQTNLGEFLKYLQKNHATIFLKNYEEYTPL 232
BLAST of mRNA_M-pyrifera_M_contig12969.5801.1 vs. uniprot
Match: A0A4D9CY10_9STRA (MRG domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CY10_9STRA) HSP 1 Score: 186 bits (472), Expect = 2.490e-53 Identity = 116/277 (41.88%), Postives = 159/277 (57.40%), Query Frame = 1
Query: 37 YFLHYMGWNSRWDKWVLESDLMAAGPEALEMQKQLKEKQKKDKVTAAKRKEDQKIKEQVXXXXXXTKRAR----VDIKKDTEDDTGVA-------EVKVAMPFTLKKQLMTDWENVTQEPRRLVKLPRELTAANVMSQYMESKADRSTPP--QIARAQELIDGVRIYFDKALPLILLYRQERRQYDLIIQKHPKKS--------------------PSEIYGAEHLLRAFVRLPQSLAQSALAAAEVTQVQKLLGDFLRFMQKNHATFFVQEYEEEE 768
YF+HY GW S+WD+WV DL+ +L++Q QL++ AAKR+ + E+ KR + D+ + + D A +VK+AMPFTLKKQL+ DWE VT+ P LV LPR +AA V+S ++ K ++ T Q+AR +E++ G+R YFDKALPLILLYR ER QY + P S PS++YGAEHLLR FVRLP+ LA + LA AE+TQVQ LG+ L+F+QK H F+ Y ++E
Sbjct: 81 YFIHYQGWKSKWDRWVGAEDLLPKDEHSLKLQAQLRQ--------AAKRRPGP-VAEKEDGREGGFKRGKGEGGEDVSRPADPDLEPAPEKNSDPQVKLAMPFTLKKQLVDDWELVTRPPHHLVPLPRSPSAAAVLSSFLAHKKEQGTASTVQLARLEEMLHGLREYFDKALPLILLYRHEREQYASLFPAAPPSSACRPTSTEPALGSSSGAAPRPSDVYGAEHLLRLFVRLPRLLALAPLAPAEMTQVQAKLGELLKFLQKQHGEIFLTSYMKKE 348
BLAST of mRNA_M-pyrifera_M_contig12969.5801.1 vs. uniprot
Match: H3GNF0_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GNF0_PHYRM) HSP 1 Score: 178 bits (452), Expect = 4.500e-49 Identity = 106/259 (40.93%), Postives = 151/259 (58.30%), Query Frame = 1
Query: 37 YFLHYMGWNSRWDKWVLESDLMAAGPEALEMQKQLKEK---QKKDKVTAAKRKEDQKIKEQVXXXXXXTKRARVDIKKD--------TEDDTGVAEVKVAMPFTLKKQLMTDWENVTQEPRRLVKLPRELTAANVMSQYMESKADRSTPPQIARAQE------LIDGVRIYFDKALPLILLYRQERRQYDLIIQKHPKKSP-SEIYGAEHLLRAFVRLPQSLAQSALAAAEVTQVQKLLGDFLRFMQKNHATFFVQEYE 759
Y+LHY GW +WD+WV ++ A P +QKQ K++ KKDK A K+K + KR + D TE+ ++ + MPF+LKKQL+ DW+NVTQ P +LV LPR+ + ++ Y+E K + + + +E +++GV+ YFD+AL ILLYR ERRQY + QK ++ P S+IYGAEHL+R FVRLP LA S ++ E+ Q+Q L DFL+F+QKN A +FV EYE
Sbjct: 47 YYLHYQGWAKKWDEWVRHDRVLEASPANRALQKQAKQEVAQAKKDKRLAKKKKISSAGVDTPSSRKSPFKRLKRSTDNDYEEFPGPSTEESAAAKQINIQMPFSLKKQLVEDWKNVTQAPHKLVPLPRKPNVSQIIKTYLEFKKSKVHEDEASEEKEYKNIEGIMEGVQSYFDRALSSILLYRMERRQYQELRQKQAEELPLSQIYGAEHLIRLFVRLPVLLASSNISPRELHQIQARLNDFLKFIQKNSAAWFVTEYE 305
BLAST of mRNA_M-pyrifera_M_contig12969.5801.1 vs. uniprot
Match: K3W9B5_GLOUD (MRG domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3W9B5_GLOUD) HSP 1 Score: 173 bits (438), Expect = 6.780e-49 Identity = 102/263 (38.78%), Postives = 148/263 (56.27%), Query Frame = 1
Query: 37 YFLHYMGWNSRWDKWVLESDLMAAGPEALEMQKQLKEKQKKDKVTAAKRKEDQKIKEQVXXXXXXTKRARVDIKKDTEDDT----------------GVAEVKVAMPFTLKKQLMTDWENVTQEPRRLVKLPRELTAANVMSQYMESK------ADRSTPPQIARAQELIDGVRIYFDKALPLILLYRQERRQYDLIIQKHPKKSPSEIYGAEHLLRAFVRLPQSLAQSALAAAEVTQVQKLLGDFLRFMQKNHATFFVQEYE 759
Y++HY GW+ +WD+WV ++ P +QKQ KE KK +A +K KI K +K++TE+DT ++ + MPF+LKKQL+ DW ++TQEP RLV LPR+ T + +++ Y+E K D + + + +++G++ YFD+AL ILLYR ER+QY I QK+ SEIYGAEHL+R FVRLP L + L E+ +Q L DFL+++QKN AT+F EYE
Sbjct: 48 YYVHYQGWHKKWDEWVAHDRVLEDTPANRALQKQAKEDAKKKPKSAVPKK---KISTSGIDPSAAKKSPFKKLKRNTENDTEEMPSPDDESILSGGGNAKQISIQMPFSLKKQLVEDWRHITQEPYRLVSLPRKPTVSQIINNYLEFKKSKLKEGDEADEKEYKNLEGIMEGIQSYFDRALGSILLYRMERKQYHEIKQKNGDVPVSEIYGAEHLIRLFVRLPILLGGANLPPRELASIQSRLNDFLKYIQKNAATWFSPEYE 307
BLAST of mRNA_M-pyrifera_M_contig12969.5801.1 vs. uniprot
Match: A0A2D4BDJ4_PYTIN (Chromatin modification-related protein EAF3, putative n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BDJ4_PYTIN) HSP 1 Score: 177 bits (449), Expect = 4.190e-48 Identity = 108/271 (39.85%), Postives = 158/271 (58.30%), Query Frame = 1
Query: 7 KLKPSGEQFTYFLHYMGWNSRWDKWVLESDLMAAGPEALEMQKQLKE---KQKKDKVTAAKRKEDQKIKEQVXXXXXXTKRARVDIKKDTEDDT-----------GVAEVKVAMPFTLKKQLMTDWENVTQEPRRLVKLPRELTAANVMSQYMESKADRSTPPQIARAQEL------IDGVRIYFDKALPLILLYRQERRQYDLIIQKHPKKSPSEIYGAEHLLRAFVRLPQSLAQSALAAAEVTQVQKLLGDFLRFMQKNHATFFVQEYE 759
KLKP+ YF+HY+GW+ +WD+WV S + P ++Q + KE K+ +K +AAK+K KI K +K + E+DT +V + MPF+LKKQL+ DW+++T EPR+LV LPR+ + A +++ Y+E K + P A +EL ++G++ YFD+AL ILLYR ER+QY + QKHP SEIYGAEHL+R FVRLP L + + E+ Q+Q L DFL++MQK ++ F EY+
Sbjct: 37 KLKPTAST-QYFVHYLGWHKKWDEWVAFSRTLEDTPANRKLQAEAKENAAKEAANKRSAAKKK---KISTGGIDPGSTRKSPFKKMKLNPENDTEELPMGNGDFDAARQVALQMPFSLKKQLVEDWKHITHEPRKLVPLPRKPSVAQIIANYLEVKKAKLKPDNAADEKELKNIEGIMEGIQSYFDRALGSILLYRHERQQYQDLQQKHPNTPLSEIYGAEHLVRLFVRLPVLLGSATIPERELAQIQPRLNDFLKYMQKQASSLFTNEYQ 303
BLAST of mRNA_M-pyrifera_M_contig12969.5801.1 vs. uniprot
Match: K7MM16_SOYBN (MRG domain-containing protein n=20 Tax=indigoferoid/millettioid clade TaxID=2233855 RepID=K7MM16_SOYBN) HSP 1 Score: 169 bits (428), Expect = 1.990e-47 Identity = 111/267 (41.57%), Postives = 157/267 (58.80%), Query Frame = 1
Query: 1 VIKLKPSGEQFTYFLHYMGWNSRWDKWVLESDLMAAGPEALEMQKQLKEKQKKDKVTAAKRKEDQKIK---------EQVXXXXXXTKRARVDIKKDTEDDTGVAE--VKVAMPFTLKKQLMTDWENVTQEPRRLVKLPRELTAANVMSQYME--SKADRSTPPQIARAQELIDGVRIYFDKALPLILLYRQERRQY-DLIIQKHPKKSPSEIYGAEHLLRAFVRLPQSLAQSALAAAEVTQVQKLLGDFLRFMQKNHATFFVQEYE 759
V K + ++ YF+HY+GW+ WD+WV E LM E + Q+ L +KQ DK + R K K E V K+ + D E +G E VK+ +P TLKKQL+ DW++VTQ+ + LVKLPR T +M++Y+E SK D P I E++ G+R YFDKALP++LLY++ER+QY D I+ SPS IYGAEHLLR FV+LP+ LA + + ++Q+ L DFL+F+QKN +TFF+ Y+
Sbjct: 48 VQKTEIRKSEWKYFVHYLGWSKNWDEWVGEERLMKHTEENVLKQQALDKKQNVDKNVKSGRSSQGKAKISTDAKMDKEDVKNNVSKGKKRKHDA--GVEKGSGTVEKLVKIQIPATLKKQLVDDWDSVTQQDK-LVKLPRSPTVDEIMTKYLEYKSKKDGVAPDSIG---EILKGIRCYFDKALPMMLLYKKERKQYNDSIVDN---VSPSTIYGAEHLLRLFVKLPELLAYVTIEEETLNRLQQKLLDFLKFLQKNQSTFFLSAYD 305
BLAST of mRNA_M-pyrifera_M_contig12969.5801.1 vs. uniprot
Match: UPI000B78B1B0 (protein MRG1-like isoform X1 n=5 Tax=Chenopodium quinoa TaxID=63459 RepID=UPI000B78B1B0) HSP 1 Score: 168 bits (425), Expect = 5.880e-47 Identity = 109/258 (42.25%), Postives = 159/258 (61.63%), Query Frame = 1
Query: 25 EQFTYFLHYMGWNSRWDKWVLESDLMAAGPEALEMQKQLKEKQKKDK--------VTAAKRKEDQKI-KEQVXXXXXXTKRARVDIKKDTEDDTGVAE--VKVAMPFTLKKQLMTDWENVTQEPRRLVKLPRELTAANVMSQYME--SKADRSTPPQIARAQELIDGVRIYFDKALPLILLYRQERRQYDLIIQKHPKKSPSEIYGAEHLLRAFVRLPQSLAQSALAAAEVTQVQKLLGDFLRFMQKNHATFFVQEYE 759
+++ YF+HY+GWN WD+WV LM E ++ Q+ L++KQ DK T K D K+ KE V K+ + D E D+ AE VK+ +P LKKQL+ DWE VTQ+ + LVKLPR T +V+ +Y+E ++ D + IA E+++G+R YFDKALPL+LLY++ER+QY + + SPS +YGA+HLLR FV+LP+ LA + +T++Q+ L DFLRF+QKN +TFF+ Y+
Sbjct: 61 KEWRYFVHYLGWNKNWDEWVGMDRLMKITEENIQKQQALEKKQGADKHHRSGRSAQTKPKGSTDAKVDKEDVKSNVAKGKKRKGD-----EKDSASAEKLVKIQIPSPLKKQLVDDWEFVTQKDK-LVKLPRSPTVDDVLKKYLEYRTRKDGTITDSIA---EILNGLRCYFDKALPLMLLYKKERQQYHEAVTNNA--SPSTVYGADHLLRLFVKLPELLAYVNMEEETMTRLQQKLVDFLRFLQKNQSTFFLSVYD 307 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig12969.5801.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig12969.5801.1 >prot_M-pyrifera_M_contig12969.5801.1 ID=prot_M-pyrifera_M_contig12969.5801.1|Name=mRNA_M-pyrifera_M_contig12969.5801.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=264bp VIKLKPSGEQFTYFLHYMGWNSRWDKWVLESDLMAAGPEALEMQKQLKEKback to top mRNA from alignment at M-pyrifera_M_contig12969:1792..5299+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig12969.5801.1 ID=mRNA_M-pyrifera_M_contig12969.5801.1|Name=mRNA_M-pyrifera_M_contig12969.5801.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=3508bp|location=Sequence derived from alignment at M-pyrifera_M_contig12969:1792..5299+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig12969:1792..5299+ >mRNA_M-pyrifera_M_contig12969.5801.1 ID=mRNA_M-pyrifera_M_contig12969.5801.1|Name=mRNA_M-pyrifera_M_contig12969.5801.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1584bp|location=Sequence derived from alignment at M-pyrifera_M_contig12969:1792..5299+ (Macrocystis pyrifera P11B4 male)back to top |