mRNA_M-pyrifera_M_contig12931.5788.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig12931.5788.1 vs. uniprot
Match: D7FKH2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKH2_ECTSI) HSP 1 Score: 323 bits (829), Expect = 1.200e-107 Identity = 168/211 (79.62%), Postives = 181/211 (85.78%), Query Frame = 1
Query: 1 ARICPLLSQVLPFSLMLFLASSMSHVEAAVVQVAYRNAKYLWPGFAGDTFTKSFQIKAIHNASEKESSTFDFICRLVNQRGKVCMECDRATMFPFQAPPSPPNQTGVNE--PPGKVRNTADLLRDHVVKQSEKLAEMGGQTLRRLRAGQLIIHTPARPISKTQSMELSSLARLTHSRHFDTIKHGVDGLLVPAGLILALATSLSARDLHEV 627
AR L QVLPFSLMLFL+SSMSHVEAA+ QVAYRNA+YLWPGFAGDTFTK+F+IK I N S+KE ST+DF CRLVNQRGKVCMECDR TMFPF APPSP + T E PP K AD LRDHVVKQSEKLAE+GGQTLRR AGQLIIHTPARPIS+TQSMELSSLARLTHSRHFDT+KHG DGL +PAGLI+ALATSLSARDLHEV
Sbjct: 86 ARSLGLQDQVLPFSLMLFLSSSMSHVEAAMTQVAYRNARYLWPGFAGDTFTKAFEIKGIRNTSDKERSTYDFTCRLVNQRGKVCMECDRTTMFPFFAPPSPRDSTATPEEQPPPKP---ADRLRDHVVKQSEKLAELGGQTLRRFSAGQLIIHTPARPISRTQSMELSSLARLTHSRHFDTVKHGEDGLAIPAGLIVALATSLSARDLHEV 293
BLAST of mRNA_M-pyrifera_M_contig12931.5788.1 vs. uniprot
Match: A0A6H5KU73_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KU73_9PHAE) HSP 1 Score: 318 bits (816), Expect = 1.910e-106 Identity = 163/202 (80.69%), Postives = 177/202 (87.62%), Query Frame = 1
Query: 28 VLPFSLMLFLASSMSHVEAAVVQVAYRNAKYLWPGFAGDTFTKSFQIKAIHNASEKESSTFDFICRLVNQRGKVCMECDRATMFPFQAPPSPPNQTGVNE--PPGKVRNTADLLRDHVVKQSEKLAEMGGQTLRRLRAGQLIIHTPARPISKTQSMELSSLARLTHSRHFDTIKHGVDGLLVPAGLILALATSLSARDLHEV 627
VLPFSLMLFL+SSMSHVEAA+ QVAYRNA+YLWPGFAGDTFTK+F+IK I N S+KE ST+DF CRLVNQRGKVCMECDR TMFPF APPSP + T E PP + AD LRDHVVKQSEKLAE+GGQTLRR AGQLIIHTPARPIS+TQSMELSSLARLTHSRHFDT+KHG DGL +PAGLI+ALATSLSARDLHEV
Sbjct: 40 VLPFSLMLFLSSSMSHVEAAMTQVAYRNARYLWPGFAGDTFTKTFEIKGIRNTSDKERSTYDFTCRLVNQRGKVCMECDRTTMFPFFAPPSPRDSTATPEEQPPPEP---ADRLRDHVVKQSEKLAELGGQTLRRFSAGQLIIHTPARPISRTQSMELSSLARLTHSRHFDTVKHGEDGLAIPAGLIVALATSLSARDLHEV 238
BLAST of mRNA_M-pyrifera_M_contig12931.5788.1 vs. uniprot
Match: A0A482S3P3_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S3P3_9ARCH) HSP 1 Score: 196 bits (497), Expect = 1.150e-58 Identity = 102/209 (48.80%), Postives = 136/209 (65.07%), Query Frame = 1
Query: 1 ARICPLLSQVLPFSLMLFLASSMSHVEAAVVQVAYRNAKYLWPGFAGDTFTKSFQIKAIHNASEKESSTFDFICRLVNQRGKVCMECDRATMFPFQAPPSPPNQTGVNEPPGKVRNTADLLRDHVVKQSEKLAEMGGQTLRRLRAGQLIIHTPARPISKTQSMELSSLARLTHSRHFDTIKHGVDGLLVPAGLILALATSLSARDLHEV 627
AR L QV+PFSLMLFLA SMSH + A +QV +R A+Y WP FAGDTF KSF ++ + S+ S C+LVNQRG VC C++ +FP PS + ++ PP R D L +H+VKQ E L E G QT LRAGQL++H+ RP++ T M+L++L RLTH RHF+T + + +LVP GL+ AL +SL++RDLHEV
Sbjct: 104 ARTLGLQDQVVPFSLMLFLAGSMSHADHAKLQVGFREAQYHWPAFAGDTFKKSFTVRKLRTTSDNHYSLLTVHCQLVNQRGVVCFTCEKTMLFPLSVAPS---EVTISRPPASARQ--DFL-EHLVKQGETLQECGSQTFTPLRAGQLVLHSLTRPLTLTHMMQLATLGRLTHERHFNTRQFRREEMLVPGGLVFALTSSLASRDLHEV 306
BLAST of mRNA_M-pyrifera_M_contig12931.5788.1 vs. uniprot
Match: A0A7S2UCF5_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UCF5_9STRA) HSP 1 Score: 192 bits (487), Expect = 8.890e-56 Identity = 101/202 (50.00%), Postives = 130/202 (64.36%), Query Frame = 1
Query: 25 QVLPFSLMLFLASSMSHVEAAVVQVAYRNAKYLWPGFAGDTFTKSFQIKAIHNASEKESSTFDFICRLVNQRGKVCMECDRATMFPFQAPPSPPNQTGVNEPPGKVRNTADLLRDHVVKQSEKLAEMGGQTLRRLRAGQLIIHTPARPISKTQSMELSSLARLTHSRHFDTIKHGVDG-LLVPAGLILALATSLSARDLHEV 627
+VLPF L+LFL SSM+H +AA VQV + N Y WP FAGDTFTK+F +K++ S+ S F C LVN RG+VCM D+ +F F N + V N L RDH++ +S LAE+G Q+L+ LR GQLI HT R I+ QSM+L+SLARLTH RHFD K+ VD +L P GL++ L TS S+RDLHE+
Sbjct: 125 RVLPFPLVLFLTSSMTHADAAKVQVGFENVTYHWPCFAGDTFTKNFLVKSVRTTSDGNHSVIKFYCELVNHRGRVCMSADKQMLFEFPITGGSSNVSSVGRMEQDSENN-QLFRDHLLSKSMTLAELGSQSLKALRPGQLIFHTMYRSITLAQSMQLASLARLTHERHFDLRKYSVDTEILCPGGLVVGLTTSASSRDLHEI 325
BLAST of mRNA_M-pyrifera_M_contig12931.5788.1 vs. uniprot
Match: A0A7S2RYC8_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RYC8_9STRA) HSP 1 Score: 191 bits (484), Expect = 1.670e-55 Identity = 96/200 (48.00%), Postives = 133/200 (66.50%), Query Frame = 1
Query: 28 VLPFSLMLFLASSMSHVEAAVVQVAYRNAKYLWPGFAGDTFTKSFQIKAIHNASEKESSTFDFICRLVNQRGKVCMECDRATMFPFQAPPSPPNQTGVNEPPGKVRNTADLLRDHVVKQSEKLAEMGGQTLRRLRAGQLIIHTPARPISKTQSMELSSLARLTHSRHFDTIKHGVDGLLVPAGLILALATSLSARDLHEV 627
VLPFS++LFLA SM+H +AA VQV Y NA Y WP F+GDTFT++F IK+ S+ E+S F F C L NQRG+V D+ +FPF+ + P++ P + + L+ H+++ + K+ +G Q+L LR GQLI+H+ RP+S TQ M+LSSLARLTH RHF+ + +D + +P GL+L L S SARDLHEV
Sbjct: 112 VLPFSMILFLAGSMTHADAAKVQVGYHNAIYHWPAFSGDTFTRTFHIKSRRTTSDGENSIFTFNCVLKNQRGRVVFTTDKTMLFPFKL--NGPDELASATPAVAMGGAKEDLKKHIIESASKIGPLGSQSLTALRPGQLILHSLCRPLSATQCMQLSSLARLTHERHFNHHVYNIDEIYIPGGLVLGLTASASARDLHEV 309
BLAST of mRNA_M-pyrifera_M_contig12931.5788.1 vs. uniprot
Match: A0A7S4JXC3_9STRA (Hypothetical protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JXC3_9STRA) HSP 1 Score: 188 bits (477), Expect = 9.440e-55 Identity = 98/210 (46.67%), Postives = 135/210 (64.29%), Query Frame = 1
Query: 1 ARICPLLSQVLPFSLMLFLASSMSHVEAAVVQVAYRNAKYLWPGFAGDTFTKSFQIKAIHNASEKESSTFDFICRLVNQRGKVCMECDRATMFPFQAPPSPPNQTGVNEPPGKVRNTADLLRDHVVKQSEKLAEMGGQTLRRLRAGQLIIHTPARPISKTQSMELSSLARLTHSRHFDTIKHGVDG-LLVPAGLILALATSLSARDLHEV 627
AR L +VLPFSL LFL SSM+H +AA VQV + NA Y WP FAGDTFTKSF++++I N S+ S F F C L+NQRG+VCM D+ +F F P S E P + RDH++ +S+ L ++G +L L GQL++HT R I+ +QS +L+SLARLTH RHFDT ++ + + +P GL+L L S ++RD+HE+
Sbjct: 78 ARKVGLQDRVLPFSLALFLTSSMTHADAAKVQVGFGNAVYHWPAFAGDTFTKSFKVRSIRNTSDGHHSIFHFECELINQRGRVCMSADKYLIFEFTVPESHV------ELPADSATKGQMFRDHLISKSDSLHDLGSHSLTTLFPGQLVLHTMNRSITFSQSQQLASLARLTHPRHFDTRRYDIHTEIFIPGGLVLGLTMSAASRDMHEI 281
BLAST of mRNA_M-pyrifera_M_contig12931.5788.1 vs. uniprot
Match: A0A7S2UZD2_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UZD2_9STRA) HSP 1 Score: 181 bits (458), Expect = 1.020e-51 Identity = 92/209 (44.02%), Postives = 137/209 (65.55%), Query Frame = 1
Query: 1 ARICPLLSQVLPFSLMLFLASSMSHVEAAVVQVAYRNAKYLWPGFAGDTFTKSFQIKAIHNASEKESSTFDFICRLVNQRGKVCMECDRATMFPFQAPPSPPNQTGVNEPPGKVRNTADLLRDHVVKQSEKLAEMGGQTLRRLRAGQLIIHTPARPISKTQSMELSSLARLTHSRHFDTIKHGVDGLLVPAGLILALATSLSARDLHEV 627
AR QVLP+SLML L SMSH++ A VA+ ++Y WPGFAGDTF K+ ++ ++ + S+++++ F F+C+L NQRG++ ++ MFPF PPS + + R L+DH V+++E L +G Q+LR+LR GQLI+HT RP+++TQ+M+L+SL RLTH RHF+ D +LVP G I+ L S ++RDLHE+
Sbjct: 102 ARALGFQDQVLPYSLMLMLTGSMSHIDEAKSHVAWNKSRYHWPGFAGDTFRKNVRVLSLRHTSDQKNTLFTFLCKLENQRGQLVFSSEKTLMFPFLVPPS--------DVVFERRPQDRSLQDHFVQRAETLEALGNQSLRKLRPGQLILHTMCRPLTQTQTMQLASLMRLTHERHFNRNIFKQDEILVPGGCIMGLMMSATSRDLHEI 302
BLAST of mRNA_M-pyrifera_M_contig12931.5788.1 vs. uniprot
Match: A0A7S1TYY8_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TYY8_9STRA) HSP 1 Score: 174 bits (440), Expect = 3.420e-49 Identity = 98/202 (48.51%), Postives = 129/202 (63.86%), Query Frame = 1
Query: 25 QVLPFSLMLFLASSMSHVEAAVVQVAYRNAKYLWPGFAGDTFTKSFQIKAIHNASEKESSTFDFICRLVNQRGKVCMECDRATMFPFQAPPSPPNQTGVNEPPGKVRNTADLLRDHVVKQSEKLAEMGGQTLRRLRAGQLIIHTPARPISKTQSMELSSLARLTHSRHFDTIKHGV-DGLLVPAGLILALATSLSARDLHEV 627
Q+LPFSLMLFLA SMSH +AA VQV Y NA + P +AGDTFTK F +K + N S+ E S F CRL+NQ +V CD+A +FPF P + +G +P + D L ++ L E+G Q+L+ LR GQL++H+ ARP++ TQS +L+SLARLTH RHFD + + VP GLI+ LA S S+RD HEV
Sbjct: 92 QILPFSLMLFLAGSMSHADAAKVQVYYSNAVFCHPAYAGDTFTKHFVVKNVRNTSDNEHSIITFGCRLLNQHERVVFHCDKAMLFPF---PRDLDASGDYKPSAPI----DGLLGAFTTRAVVLGELGSQSLQPLRPGQLLLHSLARPLTDTQSRQLASLARLTHDRHFDNRQFPQHENRYVPGGLIVGLALSASSRDFHEV 286
BLAST of mRNA_M-pyrifera_M_contig12931.5788.1 vs. uniprot
Match: A0A7S2F3A4_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2F3A4_9STRA) HSP 1 Score: 173 bits (438), Expect = 1.550e-48 Identity = 95/202 (47.03%), Postives = 128/202 (63.37%), Query Frame = 1
Query: 28 VLPFSLMLFLASSMSHVEAAVVQVAYRNAKYLWPGFAGDTFTKSFQIKAIHNASEKESSTFDFICRLVNQRGKVCMECDRATMFPFQAPPSPPNQTGVNEPPGKVR--NTADLLRDHVVKQSEKLAEMGGQTLRRLRAGQLIIHTPARPISKTQSMELSSLARLTHSRHFDTIKHGVDGLLVPAGLILALATSLSARDLHEV 627
+LPF LMLFL SMSH +AA VQV Y N Y +P + GDTFT+ QIK+ N S E+S F F C L NQRG+V D++ +FPF + + V P R +T+D+++ V K E+ ++ GQ+L LR GQL++H+ ARP+S TQ M+LSS+A+LTH RHF+ + + VP GL+L L S SARDLHEV
Sbjct: 127 LLPFGLMLFLTGSMSHADAAKVQVGYTNGHYCFPAYPGDTFTRRLQIKSRRNTSSGENSLFTFQCELRNQRGQVVFITDKSMLFPFVLD----DNSSVEYDPVAERPFSTSDMMKHLVDKFQEQEVDIRGQSLNTLRPGQLLLHSMARPLSTTQIMQLSSIAKLTHERHFNHHVFDIANIYVPGGLVLGLVQSASARDLHEV 324
BLAST of mRNA_M-pyrifera_M_contig12931.5788.1 vs. uniprot
Match: A0A812SDL1_SYMMI (Mch protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812SDL1_SYMMI) HSP 1 Score: 169 bits (429), Expect = 1.340e-47 Identity = 94/209 (44.98%), Postives = 125/209 (59.81%), Query Frame = 1
Query: 1 ARICPLLSQVLPFSLMLFLASSMSHVEAAVVQVAYRNAKYLWPGFAGDTFTKSFQIKAIHNASEKESSTFDFICRLVNQRGKVCMECDRATMFPFQAPPSPPNQTGVNEPPGKVRNTADLLRDHVVKQSEKLAEMGGQTLRRLRAGQLIIHTPARPISKTQSMELSSLARLTHSRHFDTIKHGVDGLLVPAGLILALATSLSARDLHEV 627
AR L ++PFS MLFLA SMSH + A +Q+ + Y WP FAGDTF K F I+ + S+ S C + NQR C++ MFPF+ PPS V P + + L +++V S+KL+ +G TL LR GQLI HT RP+S T M+L++LARL H RHF+T K D +LVP GL+ +LATSL++RDLHEV
Sbjct: 99 ARHLGLQDAIIPFSQMLFLAGSMSHADHAKIQLGFGVGVYHWPAFAGDTFRKKFVIRRLRTTSDGNHSIATIACEIRNQRDVNLFTCEKHMMFPFRVPPS-----DVVVPVTEEAKSETFL-NYLVSNSDKLSSLGSHTLSHLRPGQLIFHTLVRPLSPTLVMQLATLARLNHERHFNTRKFSADEILVPGGLVYSLATSLASRDLHEV 301 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig12931.5788.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 18
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig12931.5788.1 >prot_M-pyrifera_M_contig12931.5788.1 ID=prot_M-pyrifera_M_contig12931.5788.1|Name=mRNA_M-pyrifera_M_contig12931.5788.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=209bp ARICPLLSQVLPFSLMLFLASSMSHVEAAVVQVAYRNAKYLWPGFAGDTFback to top mRNA from alignment at M-pyrifera_M_contig12931:322..4380- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig12931.5788.1 ID=mRNA_M-pyrifera_M_contig12931.5788.1|Name=mRNA_M-pyrifera_M_contig12931.5788.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=4059bp|location=Sequence derived from alignment at M-pyrifera_M_contig12931:322..4380- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig12931:322..4380- >mRNA_M-pyrifera_M_contig12931.5788.1 ID=mRNA_M-pyrifera_M_contig12931.5788.1|Name=mRNA_M-pyrifera_M_contig12931.5788.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1254bp|location=Sequence derived from alignment at M-pyrifera_M_contig12931:322..4380- (Macrocystis pyrifera P11B4 male)back to top |