mRNA_M-pyrifera_M_contig12910.5782.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig12910.5782.1 vs. uniprot
Match: D8LGX3_ECTSI (Rieske (2Fe-2S) domain protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGX3_ECTSI) HSP 1 Score: 572 bits (1473), Expect = 1.950e-196 Identity = 337/539 (62.52%), Postives = 381/539 (70.69%), Query Frame = 1
Query: 1 ISGMPATIGIGPLFSDFNATTHLIDYPPQLVGRGTKPGGAIRRTAHSILPTGGFFNFAAPNHTVLPEYSLEPGGAPASPAPTAVADTASAVAPRDHAASAAAEIARKIAEGGN-SVGQLGDDDPPVITPPGFQAAAVQSVKEHLDVREGRAAVT---TRPTRGPAAIDSTRVPNLWLAVAHSSSVKTGKALKVEVDGVPLVLWRNAAGSVSAMSDVCIHRGASLARGWVATDRLVCPCETLCVVVKCEFHLPYRAVIRVYFGENSVKIVEATCVPKADGETTLYWKLYRNFAFTHPLDEGPVNKAGDFLFRQMMELTLREDKELVENIYPEYQRGFMNARYDKQVLQYRRGIAKFQAIAAERANTQVESSLQMELLHRISSSQRGLASTRNDRFAILDLIQRLEDVQAASPPAASKSNTTRAPAPASPSELAADAAXXXXXXXXXXEAANVVDALIDGSPLEESVEGEWHLEFVSN---EQESADGWDLAGSTDPQKMERVAALKEAGGEARLFDWNEKGRPLWADTTESIQIINTKDR 1596
I GMP TIGIGP+ NAT ID + G G IR HS+LPT G F+ P LPEYSLE + A V PRDHAAS A EIA+KIAEGG VG +TP GF+AAA+QSV H+++RE RAA T + PA ID TRVPNLWLAVAHSS VK G+ KVEVDGVP+ LWR + GSVSA SDVCIHRGASLARGW+A DRLVCP + VVVK EFHLPYRAVIRVYFG NS+K +EAT VP+ADGETTL+WKLYRNFA THPLDEGP+NKAGDFLF QMM+LTL+EDKE++ENIYPEYQRGFMNARYD+Q+LQYR+ I FQA AAERANTQ+E+SLQMELL+RIS S+RGLASTR DR AILDLI+RLEDVQA T P XXXXXXXXXX D + L ESVEGEWHLEFVSN E+ + +GWDLA STDP+K ER+A LKEAG EA LFDW E GRPLWADT+ES+QII+TK R
Sbjct: 13 IPGMPETIGIGPILRS-NATKS-IDI--RFGGVTFSRNGQIRGDVHSVLPTRGAFDLP-PLPAALPEYSLE-----SEAAXXXXXXXXXXVPPRDHAASVAEEIAQKIAEGGGPDVGGRATAGELQLTPSGFRAAALQSVTGHVEIRERRAAETGTXXXXXKAPAGIDPTRVPNLWLAVAHSSDVKAGEVKKVEVDGVPIALWRTSTGSVSAQSDVCIHRGASLARGWIANDRLVCPSQ---VVVKNEFHLPYRAVIRVYFGSNSLKTIEATAVPRADGETTLHWKLYRNFAITHPLDEGPINKAGDFLFGQMMDLTLKEDKEIIENIYPEYQRGFMNARYDQQMLQYRKAITNFQATAAERANTQLETSLQMELLNRISRSERGLASTRGDRSAILDLIRRLEDVQA-----------TTQPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDENALRESVEGEWHLEFVSNDGGEEGAQEGWDLASSTDPEKKERLAVLKEAGSEALLFDWKETGRPLWADTSESVQIIDTKAR 527
BLAST of mRNA_M-pyrifera_M_contig12910.5782.1 vs. uniprot
Match: A0A6H5KLG4_9PHAE (Rieske domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLG4_9PHAE) HSP 1 Score: 513 bits (1321), Expect = 2.290e-170 Identity = 337/711 (47.40%), Postives = 383/711 (53.87%), Query Frame = 1
Query: 1 ISGMPATIGIGPLFSDFNATTHLIDYPPQLVGRGTKPGGAIRRTAHSILPTGGFFNFAAPNHTVLPEYSLEPGGAPASPAPTAVADTASAVAPRDHAASAAAEIARKIAEGGN-SVGQLGDDDPPVITPPGFQAAAVQSVKEHLDVREGRAAVT---TRPTRGPAAIDSTRVPNLWLAVAHSSSVKTGKALKVEVDGVPLVLWRNAAGSVSAMSDVCIHRGASLARGWVATDRLVCP----------------------------------------------------------------------------------------------------------------------------------------------------------------------------CETLCVVVKCEFHLPYRAVIRVYFGENSVKIVEATCVPKADGETTLYWKLYRNFAFTHPLDEGPVNKAGDFLFRQMMELTLREDKELVENIYPEYQRGFMNARYDKQVLQYRRGIAKFQAIAAERANTQVESSLQMELLHRISSSQRGLASTRNDRFAILDLIQRLEDVQAASPPAASKSNTTRAPAPASPSELAADAAXXXXXXXXXXEAANVVDALIDGSPLEESVEGEWHLEFVSN---EQESADGWDLAGSTDPQKMERVAALKEAGGEARLFDWNEKGRPLWADTTESIQIINTKDR 1596
I GMP TI +GP+ T ID + G G IR HS+LPT G F P LPEYSLE + A TA A + AV PRDHAAS A E+A+KIAEG + VG L + P GF+AAA+QSV H+++RE RAA T T R PA ID TRVPNLWLAVAHSS VK G+ KVEVDGVP+ LWR + GSVSA SDVCIHRGASLARGW+A DRLVCP E CVVVK EFHLPYRAVIRVYFG NS+K +EAT VP+ADGETTL+WKLYRNFA THPLDEGP+NKAGD LF QMM+LTL+EDKE++ENIYPEYQRGFMNARYD+Q+LQYR+ I FQA AAERAN Q+E+SLQMELL+RIS S+RGLASTR+DR AILDLI+RLEDVQA + P XXXXXXXXXX D + L ESVEGEWHLEFVSN E+ +GWDLA STDP+K ER+A LKEAGGEA LFDW E GRPLWADT+ES+QII+TK R
Sbjct: 79 IPGMPETIDMGPILR--TNVTESID--TRFGGVTFSRNGQIRGDVHSVLPTRGAFGLP-PLPAALPEYSLE-----SEAAATAAAVASGAVPPRDHAASVAEEVAQKIAEGSDPDVGGLATAGEQQLMPSGFRAAALQSVTGHVEIRERRAAETGTGTGKARAPAGIDPTRVPNLWLAVAHSSDVKAGEVKKVEVDGVPIALWRTSTGSVSAQSDVCIHRGASLARGWIANDRLVCPYHGFEFESNGRLAHMPGAGRPKGSAAVARAAGRPATADAADKAKACGGRKAPTYPVKESAGWIYIFPDETRPGSVEQHLDPVVIPEAVSPQFRCIQGSMDFKGGVDASVENMLDMLHISFVHSFGNQQDPTPFAVSYERGFDDPGTEALATSQVTFRYRSGSKSFSKVVGKSTEXGCVVVKNEFHLPYRAVIRVYFGSNSLKTIEATAVPRADGETTLHWKLYRNFAITHPLDEGPINKAGDLLFGQMMDLTLKEDKEIIENIYPEYQRGFMNARYDQQMLQYRKAITNFQATAAERANAQLETSLQMELLNRISRSERGLASTRSDRSAILDLIRRLEDVQATTQP-----------------XXXXXXXXXXXXXXXXXXXXXXXXXXADENALRESVEGEWHLEFVSNDGGEEGVQEGWDLASSTDPEKKERLAVLKEAGGEALLFDWKETGRPLWADTSESVQIIDTKAR 762
BLAST of mRNA_M-pyrifera_M_contig12910.5782.1 vs. uniprot
Match: A0A836CFS0_9STRA (Rieske domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFS0_9STRA) HSP 1 Score: 288 bits (738), Expect = 3.210e-85 Identity = 206/569 (36.20%), Postives = 271/569 (47.63%), Query Frame = 1
Query: 370 PVITPPGFQAAAVQSVKEHLDVREGRAAVTTRPTRGPAAIDSTRVPNLWLAVAHSSSVKTGKALKVEVDGVPLVLWRNAAGSVSAMSDVCIHRGASLARGWVATDRLVCP---------------------------CE------------------------------------------------------------TLC-----------------------------------------------------------------VVVKCEFHLPYRAVIRVYFGENSVKIVEATCVPKADGETTLYWKLYRNFAFTHPLDEGPVNKAGDFLFRQMMELTLREDKELVENIYPEYQRGFMNARYDKQVLQYRRGIAKFQAIAAERANTQVESSLQMELLHRISSSQRGLASTRNDRFAILDLIQRLEDVQAASPPAASKSNTTRAPAPASPSELAADAAXXXXXXXXXXEAANVVDALIDGSPLE-ESVEGEWHLEFVSNEQESADGWDLAGSTDPQKMERVA----------ALKEAGGEARLFDWNEKGRPLWADTTESIQIINT 1587
PV++ P AAA V + R +P P + + VPNLWLAV H SS+K K LKV VDG P+ +WR + G + A+SD+CIHRGASLA+GW+ DRLVCP C C VVV+ E+HLPY AVIRV+FGE+ +K + A VP +G+TTL+WKLYRNF THP+D+GP+N A D LFRQMM +TL+EDK+++E IYP YQRG+MNA++DKQVL +R+ +FQ ++A R++TQ+ES+LQMELL RI+ ++RG A + +DR AIL LI++LE V SPPAA+ XXXXXXXXXX + ESV GEWHL++++ E G D ++DP+ VA L++AGGEA L DWN+ GRPLWADT ES+QII+T
Sbjct: 115 PVLSKPEVAAAAXXXXAAQR-VNKAR-----KPDSMPPNVCTDSVPNLWLAVGHMSSLKGKKVLKVTVDGKPIAIWRTSTGELKAISDICIHRGASLAKGWLHQDRLVCPYHGFEFDGHGTLQYMPGVTKEGVTKQGCSGSGRKTQAYLVREKNGWIYLFPDAARPGAIEQYSEPFTIAEASDPRFRYVEGSVEIGGDAAACMENMLDLLHISYVHSFGNLNSPVPFEVDYNHSYDDANGALASTSVTFRYKSGPKSFSKVVGKSPEVVVRNEYHLPYHAVIRVFFGEDCIKTIHAAAVPSEEGKTTLHWKLYRNFFMTHPMDQGPLNAAADLLFRQMMRVTLQEDKDIIEAIYPGYQRGYMNAKFDKQVLFWRKAYDRFQEVSAARSSTQLESALQMELLARIAGTRRGNAQSTSDRRAILRLIEQLETV---SPPAAATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEVAAESVGGEWHLQYMA---EPKGGGDAGANSDPEVSAEVADAVLSAVDGQVLQQAGGEAYLLDWNQNGRPLWADTEESVQIIDT 671
BLAST of mRNA_M-pyrifera_M_contig12910.5782.1 vs. uniprot
Match: A0A4D9DEC4_9STRA (Rieske domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DEC4_9STRA) HSP 1 Score: 144 bits (364), Expect = 5.960e-33 Identity = 113/339 (33.33%), Postives = 160/339 (47.20%), Query Frame = 1
Query: 715 VVVKCEFHLPYRAVIRVYFGENSVKIVEATCVPKADGETTLYWKLYRNFAFTHPLDEGPVNKAGDFLFRQMMELTLREDKELVENIYPEYQRGFMNARYDKQVLQYRRGIAKFQAIAAERANTQVESSLQMELLHRISSSQRGLASTRNDRFAILDLIQRLE--------DVQAASPPAA---SKSNTTRAPAPASPSELAA-----DAAXXXXXXXXXXEAANVVDALID--GSPL---------EESVEGEWHLEFVSNEQESADGWDLAGSTDPQKM----------------ERVAALKE----AGGEARLFDWN-EKGRPLWADTTESIQIINT 1587
VVV+ EFHLPY V RV FG++ VK + VP DG T +++KLYRNF + HP DE PVNK D F+ +M LTL EDKE++E++Y E+Q G++ +RYDK + YR+ + +F + R +L+MELL I ++RG +TR IL ++Q LE D + + S N T A+P +LA+ + + +DA G P ++ V E E++ L + K E+ A L+E AGGE L D+ KGRPLW DT ES Q I+T
Sbjct: 486 VVVENEFHLPYTTVTRVKFGKD-VKTIYVVAVPVEDGLTVVHYKLYRNFMYVHPQDESPVNKGLDHFFQSVMRLTLNEDKEILESLYQEHQAGYVLSRYDKPLKIYRKALKEFMEASKSREFLAERRALEMELLRLIECTERGRKATRGQHSMILSIVQGLERGFARQFKDEEGGNGEVVIEDSAVNGTWHLVYANPGDLASLPPDDEQKEGEQQSLRMQDLRPALDATATAAGGPYPWRTMTPRQQQRVTREARERMQQPEEKGGSAHSLPAAEPASKPLPRSPRETDDVLLYSEEKSARLQERLRSAGGERYLLDFTPSKGRPLWVDTDESTQTIDT 823
BLAST of mRNA_M-pyrifera_M_contig12910.5782.1 vs. uniprot
Match: A0A7R9YCQ8_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YCQ8_9STRA) HSP 1 Score: 124 bits (312), Expect = 6.570e-29 Identity = 61/113 (53.98%), Postives = 80/113 (70.80%), Query Frame = 1
Query: 715 VVVKCEFHLPYRAVIRVYFGENSVKIVEATCVPKADGETTLYWKLYRNFAFTHPLDEGPVNKAGDFLFRQMMELTLREDKELVENIYPEYQRGFMNARYDKQVLQYRRGIAKF 1053
V V+ EFHLPY A+IRV+FGE S K + A+ P + +T L +KLYRNFA THP DEGP+NK D +F +M++TL EDKE+VE++Y + GFMN +YDK L YRR + F
Sbjct: 99 VRVENEFHLPYTAIIRVHFGE-STKTIVASATPVSAKKTRLNYKLYRNFAITHPKDEGPINKILDKVFLVLMDITLNEDKEIVESLYEHARVGFMNGKYDKHQLSYRRAVQDF 210
BLAST of mRNA_M-pyrifera_M_contig12910.5782.1 vs. uniprot
Match: A0A7R9YDM5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YDM5_9STRA) HSP 1 Score: 83.2 bits (204), Expect = 9.060e-14 Identity = 45/98 (45.92%), Postives = 60/98 (61.22%), Query Frame = 1
Query: 409 QSVKEHLDVREGRAAVTTRPTRGPAAIDSTRVPNLWLAVAHSSSVKTGKALKVEVDGVPLVLWRNAAGSVSAMSDVCIHRGASLARGWVATDRLV-CP 699
++ K VR +RP + V LW++VAHSSSV A KV V +P+VLWR+A+ +SA+SDVCIHRGASLA+GWVA + + CP
Sbjct: 153 KTTKTETIVRSKILRTKSRPVQDRLEKIGADVMPLWMSVAHSSSVPRMTAKKVTVGDIPIVLWRDASDRLSALSDVCIHRGASLAKGWVAENGCITCP 250
BLAST of mRNA_M-pyrifera_M_contig12910.5782.1 vs. uniprot
Match: A0A6U4DAF0_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4DAF0_9STRA) HSP 1 Score: 82.4 bits (202), Expect = 6.930e-13 Identity = 36/64 (56.25%), Postives = 49/64 (76.56%), Query Frame = 1
Query: 511 LWLAVAHSSSVKTGKALKVEVDGVPLVLWRNAAGSVSAMSDVCIHRGASLARGWVATDRLV-CP 699
+WL VAHS+ V K +E+DG+P+V+WR+ +G +SA+SDVCIHRGASLA+GWV+ V CP
Sbjct: 238 VWLTVAHSADVPKMKTKLIEIDGIPIVVWRDQSGRLSALSDVCIHRGASLAKGWVSKSGCVACP 301
BLAST of mRNA_M-pyrifera_M_contig12910.5782.1 vs. uniprot
Match: A0A7V6CC77_9GAMM (Aromatic ring-hydroxylating dioxygenase subunit alpha (Fragment) n=1 Tax=Chromatiales bacterium TaxID=2026725 RepID=A0A7V6CC77_9GAMM) HSP 1 Score: 66.2 bits (160), Expect = 1.390e-9 Identity = 26/64 (40.62%), Postives = 40/64 (62.50%), Query Frame = 1
Query: 508 NLWLAVAHSSSVKTGKALKVEVDGVPLVLWRNAAGSVSAMSDVCIHRGASLARGWVATDRLVCP 699
N W +A ++ V K ++VE+ G+P V++R+ G ++D C+HRG SL+ GWV R VCP
Sbjct: 4 NFWYPIARATDVTDSKPIRVELLGLPFVVFRDEQGDAHVLADTCVHRGGSLSAGWVRGGRAVCP 67
BLAST of mRNA_M-pyrifera_M_contig12910.5782.1 vs. uniprot
Match: A0A6C0AW45_9ZZZZ (Rieske domain-containing protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0AW45_9ZZZZ) HSP 1 Score: 70.1 bits (170), Expect = 2.330e-9 Identity = 38/107 (35.51%), Postives = 56/107 (52.34%), Query Frame = 1
Query: 715 VVVKCEFHLPYRAVIRVYFGENSVKIVEATCVPKADGETTLYWKLYRNFAFTHPLDEGPVNKAGDFLFRQMMELTLREDKELVENIYPEYQRGFMNARYDKQVLQYR 1035
VVV+ EF+LP V RV + +K + C P E+ L++ LYRNF + D LF MELTL+ED +++ +Y +Y G M+ +D L+YR
Sbjct: 237 VVVENEFYLPDTTVTRVKANDQLIKTIVTHCYPIGKNESILHYDLYRNFM---------TSSLFDPLFNYQMELTLKEDIDILNQLYEDYNSGIMHTEFDVTQLKYR 334
BLAST of mRNA_M-pyrifera_M_contig12910.5782.1 vs. uniprot
Match: A0A1Z4R413_9CYAN (Rieske (2Fe-2S) iron-sulfur domain protein n=1 Tax=Calothrix sp. NIES-4101 TaxID=2005461 RepID=A0A1Z4R413_9CYAN) HSP 1 Score: 69.7 bits (169), Expect = 2.600e-9 Identity = 34/62 (54.84%), Postives = 37/62 (59.68%), Query Frame = 1
Query: 514 WLAVAHSSSVKTGKALKVEVDGVPLVLWRNAAGSVSAMSDVCIHRGASLARGWVATDRLVCP 699
W VA S + GK LKV + G +VLWRN A D C HRGASLARGWV D LVCP
Sbjct: 11 WHVVASSQDLLPGKILKVRLLGQDVVLWRNINNEAVAWEDRCPHRGASLARGWVENDALVCP 72 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig12910.5782.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig12910.5782.1 >prot_M-pyrifera_M_contig12910.5782.1 ID=prot_M-pyrifera_M_contig12910.5782.1|Name=mRNA_M-pyrifera_M_contig12910.5782.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=529bp MPATIGIGPLFSDFNATTHLIDYPPQLVGRGTKPGGAIRRTAHSILPTGGback to top mRNA from alignment at M-pyrifera_M_contig12910:293..7010- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig12910.5782.1 ID=mRNA_M-pyrifera_M_contig12910.5782.1|Name=mRNA_M-pyrifera_M_contig12910.5782.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=6718bp|location=Sequence derived from alignment at M-pyrifera_M_contig12910:293..7010- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig12910:293..7010- >mRNA_M-pyrifera_M_contig12910.5782.1 ID=mRNA_M-pyrifera_M_contig12910.5782.1|Name=mRNA_M-pyrifera_M_contig12910.5782.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=3174bp|location=Sequence derived from alignment at M-pyrifera_M_contig12910:293..7010- (Macrocystis pyrifera P11B4 male)back to top |