mRNA_M-pyrifera_M_contig12874.5768.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig12874.5768.1
Unique NamemRNA_M-pyrifera_M_contig12874.5768.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig12874.5768.1 vs. uniprot
Match: D7FU41_ECTSI (Pre-mRNA-splicing factor SLU7 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FU41_ECTSI)

HSP 1 Score: 642 bits (1657), Expect = 3.170e-225
Identity = 402/471 (85.35%), Postives = 412/471 (87.47%), Query Frame = 1
Query:    1 MASRKQERQLQQAREAGQIEPEMDTETGKMINPHNPEFITKRPWYLGESGPSLVHHSKQKVDEVLTMKKADEIMHQRWASKKKAAAGYRKGACKNCGAMGHKASECVERPRSLKKTAARTGMDIAPDDIHADLTSHGKVSFDAKRDRWLGYHPDQHKFTIDRFNKIDQERRRSRREATEKXXXXXXXXXXXXEIKKAAKATKTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSEDEDNREFVQKDVEQRDFQGRVARQGGLGGAQMKTTVRNLRIREDRAKYLYNLDPNSAYYDPKTRAMRDNPMPEANMEDLVFAGDNFIRYTGDVREHARTSVFAWEAADRGQEVHPVADPSQAEMLRKKFDDKKTTLKEEQKQRILDKYGGSEHLDIPDARLLVGQTESYVEYDRTGRVVKGAPKVI 1413
            MASRKQERQLQQAREAGQIEPEMDTETGKMINPHNPEFITKRPWYLGESGPSLVHHSKQKVD VLTMKKADE++ QRWA+KKKAA GYRKGACKNCGAMGHKASECVERPRS KK A +TGMDIA DD+  DLTSHGKVSFDAKRDRWLGYHPD+HK TI+RFNKIDQERRR+RRE    XXXXXXXXXXXX     AKA   A                      XXXXXXXXX      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    SEDEDNREFVQKDVEQRDFQGRVARQGGLGGAQMKTTVRNLRIREDRAKYLYNLDPNSAYYDPKTRAMRDNPMPE   EDLVFAGDNFIRYTGDVRE ARTSVFAWEAADRGQEVHPVADPSQAEMLRKKFDDKKTTLKEEQKQRILDKYGGSEHLD+PDARLLVGQTESYVEYDRTGRVVKGAPK +
Sbjct:    1 MASRKQERQLQQAREAGQIEPEMDTETGKMINPHNPEFITKRPWYLGESGPSLVHHSKQKVDAVLTMKKADELVQQRWATKKKAATGYRKGACKNCGAMGHKASECVERPRSGKKAAMKTGMDIAADDVQTDLTSHGKVSFDAKRDRWLGYHPDEHKHTIERFNKIDQERRRARREXXXXXXXXXXXXXXXXXXXXXAKAAAAAKSGTTGVGSASNGGGANGTASAXXXXXXXXXAVDSDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----SEDEDNREFVQKDVEQRDFQGRVARQGGLGGAQMKTTVRNLRIREDRAKYLYNLDPNSAYYDPKTRAMRDNPMPETAAEDLVFAGDNFIRYTGDVREQARTSVFAWEAADRGQEVHPVADPSQAEMLRKKFDDKKTTLKEEQKQRILDKYGGSEHLDVPDARLLVGQTESYVEYDRTGRVVKGAPKAV 467          
BLAST of mRNA_M-pyrifera_M_contig12874.5768.1 vs. uniprot
Match: A0A836CLD5_9STRA (Pre-mRNA-splicing factor SLU7 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLD5_9STRA)

HSP 1 Score: 451 bits (1161), Expect = 1.590e-150
Identity = 292/471 (62.00%), Postives = 346/471 (73.46%), Query Frame = 1
Query:   13 KQERQLQQAREAGQIEPEMDTETGKMINPHNPEFITKRPWYLGESGPSLVHHSKQKVDEVLTMKKADEIMHQRWASKKKAAAGYRKGACKNCGAMGHKASECVERPRSLKKTAARTGMDIAPDDIHADLTSHGKVSFDAKRDRWLGYHPDQHKFTIDRFNKIDQERRRSRREATEKXXXXXXXXXXXXEIKKAAKATKTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSEDEDNREFVQKDVEQRDFQGRVARQGGLGGAQMKTTVRNLRIREDRAKYLYNLDPNSAYYDPKTRAMRDNPMPEANMEDLVFAGDNFIRYTGDVREHARTSVFAWEAADRGQEVHPVADPSQAEMLRKKFDDKKTTLKEEQKQRILDKYGGSEHLDIP----DARLLVGQTESYVEYDRTGRVVKGAPKVI 1413
            K+ +Q++QAR +GQ+ PE DTETGKMINPHNP+FI+KRPWYLG+SGPSL HHSKQK D VL+MK+AD I+  +WA K  AA  +R GACKNCGAMGHK +ECVERPRS K+ A +TG+  A DD    L ++GK++FDAKRDRW GYHPDQHK  ++RFNK+D+ERRR+       XXXXXXXXX   + K A KA K A        XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                                    E ED REF++KD E+RDFQGRVARQGGLGGAQM TTVRNLRIREDRAKYLYNLDP+SAYYDPKTRAMR+NP P AN E+L +AGDNF+RY G V++ ART V+AWEAA RGQE+HPVADPSQAE+L ++F+ +K  LK +Q+ RIL+KYGG           D RL +GQ+E+YVEYDR GRV+KGA + +
Sbjct:    7 KKRKQIEQARMSGQLAPETDTETGKMINPHNPDFISKRPWYLGDSGPSLKHHSKQKSDHVLSMKEADMIVQTKWAKKADAAVKFRPGACKNCGAMGHKTTECVERPRSTKRAAWKTGVATATDDTVVSLEAYGKLNFDAKRDRWHGYHPDQHKEVVERFNKLDEERRRAX------XXXXXXXXXAKADRKGARKAAKAALANGEAAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX------------------------------------EGED-REFIEKDTEKRDFQGRVARQGGLGGAQMATTVRNLRIREDRAKYLYNLDPDSAYYDPKTRAMRENPNPSANPEELAYAGDNFMRYGGGVKDFARTQVYAWEAAARGQELHPVADPSQAELLHRQFEARKDALKGDQRTRILEKYGGXXXXAAGEGGIDPRLALGQSEAYVEYDRAGRVIKGAAQAV 434          
BLAST of mRNA_M-pyrifera_M_contig12874.5768.1 vs. uniprot
Match: K3X5L6_GLOUD (Pre-mRNA-splicing factor SLU7 n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X5L6_GLOUD)

HSP 1 Score: 345 bits (885), Expect = 2.710e-109
Identity = 249/470 (52.98%), Postives = 315/470 (67.02%), Query Frame = 1
Query:   13 KQERQLQQAREAGQIEPEMDTETGKMINPHNPEFITKRPWYLGESGPSLVHHSKQKVDEVLTMKKADEIMHQRWASKKKAAAG------YRKGACKNCGAMGHKASECVERPRSLKKTAARTGMDIAPDDIHADLTSH--GKVSFDAKRDRWLGYHPDQHKFTIDRFNKIDQERRRSRREATEKXXXXXXXXXXXXEIKKAAKATKTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSEDEDNREFVQKDVEQRDFQGRVARQGGLGGAQMKTTVRNLRIREDRAKYLYNLDPNSAYYDPKTRAMRDNPMPEANMEDLVFAGDNFIRYTGDVREHARTSVFAWEAADRGQEVHPVADPSQAEMLRKKFDDKKTTLKEEQKQRILDKYGGSEHLDIPDARLLVGQTESYVEYDRTGRVVKG 1398
            K++R+L++AR+ G + PE D E G +INPHNPEFITKRPWYLG+SGPSL H S Q    +L++ +ADE+  +    K +++A       +RKGACKNCGAM HK  ECVERPR  K  A ++  DI  D++  D+ S   GK++FDAKRD+WLGY P +H  TI R++KID+ R++ R E   K            +++K+A+   +    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                                        F  +D E   F  RVARQGG+GGAQMKTTVRNLRIRED AKYL NL+PNSAYYDPKTR+MRDNP PE N ED  + GDN +R+TGD ++ A   +FAWEA  +G ++HP+A+PSQAE L+K+F++KK  L++E+ ++ILDKYGG +HL+ P   LL+ QTE YVEY R GRVVKG
Sbjct:   15 KKKRELEEARKNGTLPPEQDAE-GNLINPHNPEFITKRPWYLGDSGPSLKHQSVQNQSHLLSIHEADELYLRGKKVKAQSSAAERKPTKWRKGACKNCGAMSHKTHECVERPR--KVGAWKSNKDIKGDEVLVDVRSQQFGKLAFDAKRDQWLGYDPKEHTKTIARYDKIDEARKKLRMEEVNK------------KLQKSAEDAASGDGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----------------------------------------FRDRD-EGPMFTERVARQGGVGGAQMKTTVRNLRIREDTAKYLRNLNPNSAYYDPKTRSMRDNPNPELNPEDTTYLGDNVVRFTGDAQKLASAQLFAWEAYAKGTDIHPLANPSQAEFLKKQFEEKKAALEKEKSRKILDKYGGQQHLEAPPKELLLAQTEHYVEYSRDGRVVKG 428          
BLAST of mRNA_M-pyrifera_M_contig12874.5768.1 vs. uniprot
Match: A0A7R9U7Z6_9STRA (Pre-mRNA-splicing factor SLU7 (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U7Z6_9STRA)

HSP 1 Score: 340 bits (873), Expect = 6.320e-109
Identity = 223/473 (47.15%), Postives = 295/473 (62.37%), Query Frame = 1
Query:    1 MASRKQERQLQQAREAGQIEPEMDTETGKMINPHNPEFITKRPWYLGESGPSLVHHSKQKVDEVLTMKKADEIMH----QRWASKKKAAAGYRKGACKNCGAMGHKASECVERPRSLKKTAARTGMDIAPDDIHADLTSHGKVSFDAKRDRWLGYHPDQH-KFTIDRFNKIDQERRRSRREATEKXXXXXXXXXXXXEIKKAAKATKTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSEDEDNREFVQKDVEQRDFQGRVARQGGLGGAQMKTTVRNLRIREDRAKYLYNLDPNSAYYDPKTRAMRDNPMPEANMEDLVFAGDNFIRYTGDVREHARTSVFAWEAADRGQEVHPVADPSQAEMLRKKFDDKKTTLKEEQKQRILDKYG--GSEHLDIPDARLLVGQTESYVEYDRTGRVVKG 1398
            MA R ++R++ +AR+AG + PE+D E G+M+NPHNPE+ITKRPWYLGE G  + HH KQKV   L++ +A+E++     Q   +K++ A G+RKGAC+NCG++ H   +C+ERPR+ K  A +TG+DIA DD+  DL +HGK+++DAKRD + G+  + H K    ++++++ ERRR R+E  E  XXXXXXXXXXX      K  +            XXXXXXXXXXXXXXX                                                     G + +   +++ KD +Q+DFQGRVARQGGLGGAQM TTVRNLR+RED+AKYL NLDPNSAYYDPK+R+MR+NP+P  +    V+AGDNFIRY GD  E A+T VFAW A  RG E+H  A PSQAEM RK  + +K  L E++K+ I DKYG  G   +   D RL +GQTE  ++Y   GRVVKG
Sbjct:    8 MAERNKKRKIAEARQAGTLAPEVDDE-GRMVNPHNPEYITKRPWYLGEGG-GIKHHQKQKVTHFLSLNEAEELVQDARRQAKQNKRQRALGFRKGACRNCGSLSHTEKDCLERPRAAKSAAWKTGLDIANDDVQVDLETHGKLAYDAKRDSYRGFDVEHHQKLLRMKYDRLEAERRRVRQEERETKXXXXXXXXXXXXXXXELKQKEEGPENGKAAEDDXXXXXXXXXXXXXXX-----------------------------------------------------GEKSDGEEDYLAKDDQQKDFQGRVARQGGLGGAQMATTVRNLRLREDKAKYLLNLDPNSAYYDPKSRSMRENPLPHLDPAQAVYAGDNFIRYQGDAVELAKTQVFAWNAEARGNEIHLQAAPSQAEMARKHHEGQKKKLDEDRKKAIADKYGVAGGATMHSLDPRLALGQTEQMLKYTADGRVVKG 425          
BLAST of mRNA_M-pyrifera_M_contig12874.5768.1 vs. uniprot
Match: W2PIB2_PHYPN (Pre-mRNA-splicing factor SLU7 n=12 Tax=Phytophthora TaxID=4783 RepID=W2PIB2_PHYPN)

HSP 1 Score: 340 bits (873), Expect = 1.420e-107
Identity = 229/471 (48.62%), Postives = 301/471 (63.91%), Query Frame = 1
Query:   13 KQERQLQQAREAGQIEPEMDTETGKMINPHNPEFITKRPWYLGESGPSLVHHSKQKVDEVLTMKKADEIMHQRWASKKKAAAG-------YRKGACKNCGAMGHKASECVERPRSLKKTAARTGMDIAPDDIHADLTSH--GKVSFDAKRDRWLGYHPDQHKFTIDRFNKIDQERRRSRREATEKXXXXXXXXXXXXEIKKAAKATKTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSEDEDNREFVQKDVEQRDFQGRVARQGGLGGAQMKTTVRNLRIREDRAKYLYNLDPNSAYYDPKTRAMRDNPMPEANMEDLVFAGDNFIRYTGDVREHARTSVFAWEAADRGQEVHPVADPSQAEMLRKKFDDKKTTLKEEQKQRILDKYGGSEHLDIPDARLLVGQTESYVEYDRTGRVVKG 1398
            K++R++++AR+ G + PE D + G +INPHNPE+I+KRPWYLG+SGPSL H + Q    +L++ +ADE+  +    K++AAA        +RKGACKNCGAM HK +ECVERPR  K  A +T  D+  DD+  D+ S   GK++FDAKRD+WLGY P  H  T++R+ K+D  R++ R E   K            ++K++A   K  XXXXXXXXXXXXXXXXXXXXXXXXXXXXX                                                    DE+ R+  +  +    F  RVARQGG+GGAQMKTTVRNLRIRED AKYL NL+PNSAYYDPKTR+MRDNP PE N ED  F GDN  R+TGD ++ A   +FAWEA  +G ++HP+A+PSQAE L+K+++++K  L++E+ ++ILDKYGG E+L+ P   LL+ Q+E YVEY R GRVVKG
Sbjct:   15 KKKREIEEARKNGTLPPEQDAD-GNLINPHNPEYISKRPWYLGDSGPSLKHQTLQHQAHLLSIHEADELYLK--GRKQQAAASSAGRQRKWRKGACKNCGAMSHKTNECVERPR--KVGAWKTNKDLKSDDMVVDVRSEKFGKLAFDAKRDQWLGYDPKDHSKTVERYEKVDAARKKLRAEEINK------------KLKESADKKKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----------------------------------------------------DEEFRDHDEGPM----FTERVARQGGVGGAQMKTTVRNLRIREDTAKYLRNLNPNSAYYDPKTRSMRDNPNPELNPEDTTFVGDNMTRFTGDAQKLASAQLFAWEAYSKGTDIHPIANPSQAEFLKKQYEERKAALEKEKSRKILDKYGGQEYLEAPPKELLLAQSEHYVEYSRDGRVVKG 412          
BLAST of mRNA_M-pyrifera_M_contig12874.5768.1 vs. uniprot
Match: A0A484DY55_BRELC (Pre-mRNA-splicing factor SLU7 n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DY55_BRELC)

HSP 1 Score: 339 bits (870), Expect = 3.880e-107
Identity = 212/473 (44.82%), Postives = 281/473 (59.41%), Query Frame = 1
Query:   13 KQERQLQQAREAGQIEPEMDTETGKMINPHNPEFITKRPWYLGESGPSLVHHSKQKVDEVLTMKKADEI---------MHQRWASKKKAAAGYRKGACKNCGAMGHKASECVERPRSLKKTAARTGMDIAPDDIHADLTSH--GKVSFDAKRDRWLGYHPDQHKFTIDRFNKIDQERRRSRREATEKXXXXXXXXXXXXEIKKAAKATKTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSEDEDNREFVQKDVEQRDFQGRVARQGGLGGAQMKTTVRNLRIREDRAKYLYNLDPNSAYYDPKTRAMRDNPMPEANMEDLVFAGDNFIRYTGDVREHARTSVFAWEAADRGQEVHPVADPSQAEMLRKKFDDKKTTLKEEQKQRILDKYGGSEHLDIPDARLLVGQTESYVEYDRTGRVVKG 1398
            K++R++++AR+ G + PE D E G +INPHNPEFI+KRPWYLG+SGPSL H + Q    +L++ +ADE+         +    A K+K    +RKGACKNCGAM HK +ECVERPR +   A +T MD+  D++  D+ S   GK++FDAKRD+WLGY P  H  T++R+ KID  R++ R +   K            ++K++A   K                   XXXXXXXXXXX                                                    EDE+ R+  +  +    F  RVARQGG+GGAQMKTTVRNLRIRED AKYL NL+PNSAYYDPKTR+MRDNP PE N ED  F GDN  R+TGD ++ A   +FAWEA  +G ++HP+A+PSQAE L+K+++++K  L++E+  +IL+KYGG EHL+ P   LL+ QTE YVEY R G VVKG
Sbjct:   15 KKKREIEEARKNGILPPEQDAE-GNLINPHNPEFISKRPWYLGDSGPSLNHQTLQHQARLLSINEADELYIKGRKAQSLITGIARKRK----WRKGACKNCGAMSHKTNECVERPRKIG--AWKTNMDLKKDEVVVDVRSEKFGKLTFDAKRDQWLGYDPKDHLKTVERYEKIDAARKKLRADEINK------------KLKESADKNKEKKVRNKGQNREGDLSNSDXXXXXXXXXXX----------------------------------------------------EDEEFRDHDEGTM----FTERVARQGGVGGAQMKTTVRNLRIREDTAKYLRNLNPNSAYYDPKTRSMRDNPNPELNPEDTTFVGDNMTRFTGDAQKLASAQLFAWEAYSKGTDIHPLANPSQAEFLKKQYEERKALLEKEKSSKILEKYGGQEHLEAPPKELLLAQTEHYVEYSRDGHVVKG 412          
BLAST of mRNA_M-pyrifera_M_contig12874.5768.1 vs. uniprot
Match: H3G9I3_PHYRM (Pre-mRNA-splicing factor SLU7 n=6 Tax=Phytophthora TaxID=4783 RepID=H3G9I3_PHYRM)

HSP 1 Score: 337 bits (864), Expect = 2.730e-106
Identity = 227/466 (48.71%), Postives = 296/466 (63.52%), Query Frame = 1
Query:   13 KQERQLQQAREAGQIEPEMDTETGKMINPHNPEFITKRPWYLGESGPSLVHHSKQKVDEVLTMKKADE--IMHQRWASKKKAAAGYRKGACKNCGAMGHKASECVERPRSLKKTAARTGMDIAPDDIHADLTSH--GKVSFDAKRDRWLGYHPDQHKFTIDRFNKIDQERRRSRREATEKXXXXXXXXXXXXEIKKAAKATKTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSEDEDNREFVQKDVEQRDFQGRVARQGGLGGAQMKTTVRNLRIREDRAKYLYNLDPNSAYYDPKTRAMRDNPMPEANMEDLVFAGDNFIRYTGDVREHARTSVFAWEAADRGQEVHPVADPSQAEMLRKKFDDKKTTLKEEQKQRILDKYGGSEHLDIPDARLLVGQTESYVEYDRTGRVVKG 1398
            K+++++++AR+ G + PE D + G +INPHNPEFI+KRPWYLG+SGPSL H + Q    +L++++ADE  I  ++  +       +RKGACKNCGAM HK +ECVERPR  K  A +T  D+  D++  D+ S   GK++FDAKRD+WLGY P +H  TI+R+ K+D+ R+  R E   +            ++K++A   K  XXXXXXXXXXXXXXXXXXXXXXXXXXXXX                                                         EF   D E   F  RVARQGG+GGAQMKTTVRNLRIRED AKYL NL+PNSAYYDPKTR+MRDNP PE N ED  F GDN  R+TGD ++ A   +FAWEA  +G ++HP+A+PSQAE L+K+++++K  L++E+ ++ILDKYGG EHL+ P   LL+ Q+E YVEY R GRVVKG
Sbjct:   15 KKKQEIEEARKNGTLPPEQDAD-GNLINPHNPEFISKRPWYLGDSGPSLKHQTLQHQAHLLSIQEADELYIKGRKQLTTTARQRKWRKGACKNCGAMSHKTNECVERPR--KVGAWKTNKDLQSDEVVVDVRSEKFGKLAFDAKRDQWLGYDPKEHAKTIERYEKVDEARKNKRAEEINQ------------KLKESADKKKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---------------------------------------------------------EFRDHD-EGPMFTDRVARQGGVGGAQMKTTVRNLRIREDTAKYLRNLNPNSAYYDPKTRSMRDNPNPELNPEDTTFVGDNTARFTGDAQKLASAQLFAWEAYSKGTDIHPLANPSQAEFLKKQYEERKAALEKEKSRKILDKYGGQEHLEAPPKELLLAQSEHYVEYSRDGRVVKG 407          
BLAST of mRNA_M-pyrifera_M_contig12874.5768.1 vs. uniprot
Match: A0A3R7JF27_9STRA (Pre-mRNA-splicing factor SLU7 n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7JF27_9STRA)

HSP 1 Score: 337 bits (863), Expect = 3.170e-106
Identity = 242/481 (50.31%), Postives = 309/481 (64.24%), Query Frame = 1
Query:   13 KQERQLQQAREAGQIEPEMDTETGKMINPHNPEFITKRPWYLGESGPSLVHHSKQKVDEVLTMKKADEIM-----HQRWA--SKKKAAAGYRKGACKNCGAMGHKASECVERPRSLKKTAARTGMDIAPDDIHADLTSH--GKVSFDAKRDRWLGYHPDQHKFTIDRFNKIDQERRRSRREATEKXXXXXXXXXXXXEIKKAAKATKTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSEDEDNREFVQKDVEQRDFQGRVARQGGLGGAQMKTTVRNLRIREDRAKYLYNLDPNSAYYDPKTRAMRDNPMPEANMEDLVFAGDNFIRYTGDVREHARTSVFAWEAADRGQEVHPVADPSQAEMLRKKFDDKKTTLKEEQKQRILDKYGGSEHLDIPDARLLVGQTESYVEYDRTGRVVKG---APKVIGW 1419
            K++R++++AR+ G + PE D + G +INPHNPE+I+KRPWYLG+SGPSL H + Q    +L++++ADE+       Q  A  S       +RKGACKNCGAM HK +ECVERPR  K  A +T  D+  D++  D+ S   GK++FDAKRD+WLGY P +H  TI+R+ K+D  R++ R E   K            ++K++A   K  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                                               EF   D E   F  RVARQGG+GGAQMKTTVRNLRIRED AKYL NL+PNSAYYDPKTR+MRDNP PE N ED  + GDN  R+TGD +  A   +FAWEA  +G ++HP+A+PSQAE L+K+++++K  L++E+ ++ILDKYGG EHL+ P   LL+ Q+E YVEY R GRVVKG   AP   G+
Sbjct:   15 KKKREIEEARKNGTLPPEQDAD-GNLINPHNPEYISKRPWYLGDSGPSLKHQTLQHQAHLLSIQEADELYLKGRKQQTVAEPSNSSRQRKWRKGACKNCGAMSHKTNECVERPR--KVGAWKTNKDLKKDEVVVDVRSERFGKLAFDAKRDQWLGYDPKEHTKTIERYEKVDAARKKLRAEEINK------------KLKESADKKKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----------------------------------------------EEFRDHD-EGPMFTDRVARQGGVGGAQMKTTVRNLRIREDTAKYLRNLNPNSAYYDPKTRSMRDNPNPELNPEDTTYTGDNLARFTGDTQRLASAQLFAWEAYSKGTDIHPLANPSQAEFLKKQYEERKAALEKEKSRKILDKYGGQEHLEAPPKELLLAQSEQYVEYSRDGRVVKGRERAPMAWGY 433          
BLAST of mRNA_M-pyrifera_M_contig12874.5768.1 vs. uniprot
Match: A0A3M6VBJ9_9STRA (Pre-mRNA-splicing factor SLU7 n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VBJ9_9STRA)

HSP 1 Score: 333 bits (854), Expect = 1.180e-104
Identity = 226/471 (47.98%), Postives = 296/471 (62.85%), Query Frame = 1
Query:   13 KQERQLQQAREAGQIEPEMDTETGKMINPHNPEFITKRPWYLGESGPSLVHHSKQKVDEVLTMKKADEIM---HQRWASKKKAAAG----YRKGACKNCGAMGHKASECVERPRSLKKTAARTGMDIAPDDIHADLTSH--GKVSFDAKRDRWLGYHPDQHKFTIDRFNKIDQERRRSRREATEKXXXXXXXXXXXXEIKKAAKATKTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSEDEDNREFVQKDVEQRDFQGRVARQGGLGGAQMKTTVRNLRIREDRAKYLYNLDPNSAYYDPKTRAMRDNPMPEANMEDLVFAGDNFIRYTGDVREHARTSVFAWEAADRGQEVHPVADPSQAEMLRKKFDDKKTTLKEEQKQRILDKYGGSEHLDIPDARLLVGQTESYVEYDRTGRVVKG 1398
            K++R++++AR+ G + PE D + G +INPHNPE+I+KRPWYLG+SGPSL H + Q+   +L++ +AD++     + + + + +A      +RKGACKNCGAM HK +ECV+RPR  K  A +T  ++  DD+  D+ S   GK++FDAKRD+WLGY P +H  TI+R+ K+D  R++ RRE   K              KK  K  K   XXXXXXXXXXXXXXXXXXXXXXXXXXXX                                                         EF  +D E   F  RVARQGG+GGAQMKTTVRNLRIRED AKYL NL+PNSA+YDPKTR+MRDNP PE N ED  F GDN  RYTGD ++ A   +FAWEA  +G ++H +A+PSQAE L+K+++++K  L++E+ ++ILDKYGG EHL+ P   LL+ Q+E YVEY R GRVVKG
Sbjct:   15 KKKREIEEARKNGTLPPEQDAD-GNLINPHNPEYISKRPWYLGDSGPSLKHQTLQREAHLLSIHEADDLYIKGRKNYVAVEPSAGNRQRKWRKGACKNCGAMTHKTNECVDRPR--KVGAWKTNKNLQHDDVIVDVRSEKFGKLAFDAKRDQWLGYDPKEHAKTIERYEKVDAARKQLRREEINKKLNDSVD-------KKMMKEKKVRAXXXXXXXXXXXXXXXXXXXXXXXXXXXX---------------------------------------------------------EFRDRD-EGPMFTERVARQGGVGGAQMKTTVRNLRIREDTAKYLRNLNPNSAFYDPKTRSMRDNPNPELNPEDTTFIGDNMARYTGDAQKLASAQLFAWEAYSKGTDIHSLANPSQAEFLKKQYEERKAALEKEKSRKILDKYGGQEHLEAPPKELLLAQSEHYVEYSRDGRVVKG 417          
BLAST of mRNA_M-pyrifera_M_contig12874.5768.1 vs. uniprot
Match: A0A8K1CDK9_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CDK9_PYTOL)

HSP 1 Score: 332 bits (850), Expect = 2.090e-104
Identity = 213/474 (44.94%), Postives = 283/474 (59.70%), Query Frame = 1
Query:   13 KQERQLQQAREAGQIEPEMDTETGKMINPHNPEFITKRPWYL----GESGPSLVHHSKQKVDEVLTMKKADEIMHQRWASKKKAAAG------YRKGACKNCGAMGHKASECVERPRSLKKTAARTGMDIAPDDIHADLTS--HGKVSFDAKRDRWLGYHPDQHKFTIDRFNKIDQERRRSRREATEKXXXXXXXXXXXXEIKKAAKATKTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSEDEDNREFVQKDVEQRDFQGRVARQGGLGGAQMKTTVRNLRIREDRAKYLYNLDPNSAYYDPKTRAMRDNPMPEANMEDLVFAGDNFIRYTGDVREHARTSVFAWEAADRGQEVHPVADPSQAEMLRKKFDDKKTTLKEEQKQRILDKYGGSEHLDIPDARLLVGQTESYVEYDRTGRVVKG 1398
            K++R++++AR+ G + PE D + G +INPHNPE++TKRPWYL     ++GPSL H + Q    VL++ +AD++  +    KK+  A       + KGACKNCGAM HK  ECVERPR  K  A +T  DI  D++  D+ S  +GK++FDAKRD+WLGY P +H  T++R+ KI+  R++ R +   K            +++KA++  K  XX   XXXXXXXXXXXX                                                              SEDE+ R+  +  +    F  R+ARQGG+GGAQM TTVRNLRIRED AKYL NL+P SAYYDPKTR+MRDNP PE N ED  F GDN +R+TGD ++ A T +FAWEA  +G ++HP A PSQAE LRK+F+++K  L+ E+ ++ILDKYGG EHL  P   LL+ QTE+YVEY R GRVVKG
Sbjct:   11 KKKREIEEARKNGTLPPEQDAD-GNLINPHNPEYLTKRPWYLLGSAEDAGPSLKHQTLQNESHVLSIHEADDLYLR---GKKRVQAAETKPRKWCKGACKNCGAMSHKTVECVERPR--KVGAWKTSKDIREDEVLVDVRSQKYGKLAFDAKRDQWLGYDPKEHDRTVERYQKIEDARKQKRMDEVNK------------KLQKASEKNKXXXXGSDXXXXXXXXXXXX--------------------------------------------------------------SEDEEFRDREEGPM----FSERIARQGGVGGAQMMTTVRNLRIREDTAKYLRNLNPESAYYDPKTRSMRDNPNPEMNPEDTTFIGDNVVRHTGDAQKLATTQLFAWEAYAKGADIHPQATPSQAEFLRKQFEERKAALEREKSKKILDKYGGQEHLQAPPKELLLAQTENYVEYSRDGRVVKG 400          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig12874.5768.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FU41_ECTSI3.170e-22585.35Pre-mRNA-splicing factor SLU7 n=2 Tax=Ectocarpus T... [more]
A0A836CLD5_9STRA1.590e-15062.00Pre-mRNA-splicing factor SLU7 n=1 Tax=Tribonema mi... [more]
K3X5L6_GLOUD2.710e-10952.98Pre-mRNA-splicing factor SLU7 n=1 Tax=Globisporang... [more]
A0A7R9U7Z6_9STRA6.320e-10947.15Pre-mRNA-splicing factor SLU7 (Fragment) n=1 Tax=P... [more]
W2PIB2_PHYPN1.420e-10748.62Pre-mRNA-splicing factor SLU7 n=12 Tax=Phytophthor... [more]
A0A484DY55_BRELC3.880e-10744.82Pre-mRNA-splicing factor SLU7 n=1 Tax=Bremia lactu... [more]
H3G9I3_PHYRM2.730e-10648.71Pre-mRNA-splicing factor SLU7 n=6 Tax=Phytophthora... [more]
A0A3R7JF27_9STRA3.170e-10650.31Pre-mRNA-splicing factor SLU7 n=3 Tax=Phytophthora... [more]
A0A3M6VBJ9_9STRA1.180e-10447.98Pre-mRNA-splicing factor SLU7 n=1 Tax=Peronospora ... [more]
A0A8K1CDK9_PYTOL2.090e-10444.94Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig12874contigM-pyrifera_M_contig12874:942..8898 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score646.4
Seed ortholog evalue1.1e-182
Seed eggNOG ortholog2880.D7FU41
Preferred nameSLU7
KEGG koko:K12819,ko:K17081,ko:K20040
KEGG Pathwayko03040,map03040
Hectar predicted targeting categoryother localisation
GOsGO:0000350,GO:0000375,GO:0000377,GO:0000393,GO:0000398,GO:0003674,GO:0003676,GO:0003723,GO:0003727,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005681,GO:0005684,GO:0006139,GO:0006396,GO:0006397,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008284,GO:0008380,GO:0009987,GO:0010467,GO:0016043,GO:0016070,GO:0016071,GO:0022607,GO:0022613,GO:0022618,GO:0032991,GO:0034622,GO:0034641,GO:0042127,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0045292,GO:0046483,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0065003,GO:0065007,GO:0071020,GO:0071021,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990904
EggNOG free text desc.RNA splicing
EggNOG OGsKOG2560@1,KOG2560@2759
COG Functional cat.A
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03029,ko03041,ko04131,ko04147
Exons9
Model size1434
Cds size1434
Stop1
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815800.0878932-CDS-M-pyrifera_M_contig12874:941..11061622815800.0878932-CDS-M-pyrifera_M_contig12874:941..1106Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12874 942..1106 -
1692277575.1342056-CDS-M-pyrifera_M_contig12874:941..11061692277575.1342056-CDS-M-pyrifera_M_contig12874:941..1106Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12874 942..1106 -
1622815800.1001-CDS-M-pyrifera_M_contig12874:2496..26471622815800.1001-CDS-M-pyrifera_M_contig12874:2496..2647Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12874 2497..2647 -
1692277575.1508255-CDS-M-pyrifera_M_contig12874:2496..26471692277575.1508255-CDS-M-pyrifera_M_contig12874:2496..2647Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12874 2497..2647 -
1622815800.1126149-CDS-M-pyrifera_M_contig12874:3046..32551622815800.1126149-CDS-M-pyrifera_M_contig12874:3046..3255Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12874 3047..3255 -
1692277575.1615849-CDS-M-pyrifera_M_contig12874:3046..32551692277575.1615849-CDS-M-pyrifera_M_contig12874:3046..3255Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12874 3047..3255 -
1622815800.1241632-CDS-M-pyrifera_M_contig12874:4762..49591622815800.1241632-CDS-M-pyrifera_M_contig12874:4762..4959Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12874 4763..4959 -
1692277575.1755767-CDS-M-pyrifera_M_contig12874:4762..49591692277575.1755767-CDS-M-pyrifera_M_contig12874:4762..4959Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12874 4763..4959 -
1622815800.1402965-CDS-M-pyrifera_M_contig12874:5019..51731622815800.1402965-CDS-M-pyrifera_M_contig12874:5019..5173Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12874 5020..5173 -
1692277575.185114-CDS-M-pyrifera_M_contig12874:5019..51731692277575.185114-CDS-M-pyrifera_M_contig12874:5019..5173Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12874 5020..5173 -
1622815800.1533358-CDS-M-pyrifera_M_contig12874:5684..58281622815800.1533358-CDS-M-pyrifera_M_contig12874:5684..5828Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12874 5685..5828 -
1692277575.194404-CDS-M-pyrifera_M_contig12874:5684..58281692277575.194404-CDS-M-pyrifera_M_contig12874:5684..5828Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12874 5685..5828 -
1622815800.1636913-CDS-M-pyrifera_M_contig12874:6340..64841622815800.1636913-CDS-M-pyrifera_M_contig12874:6340..6484Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12874 6341..6484 -
1692277575.203918-CDS-M-pyrifera_M_contig12874:6340..64841692277575.203918-CDS-M-pyrifera_M_contig12874:6340..6484Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12874 6341..6484 -
1622815800.1793218-CDS-M-pyrifera_M_contig12874:7206..73941622815800.1793218-CDS-M-pyrifera_M_contig12874:7206..7394Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12874 7207..7394 -
1692277575.212997-CDS-M-pyrifera_M_contig12874:7206..73941692277575.212997-CDS-M-pyrifera_M_contig12874:7206..7394Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12874 7207..7394 -
1622815800.1900835-CDS-M-pyrifera_M_contig12874:8816..88981622815800.1900835-CDS-M-pyrifera_M_contig12874:8816..8898Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12874 8817..8898 -
1692277575.2204926-CDS-M-pyrifera_M_contig12874:8816..88981692277575.2204926-CDS-M-pyrifera_M_contig12874:8816..8898Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12874 8817..8898 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig12874.5768.1prot_M-pyrifera_M_contig12874.5768.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig12874 942..8898 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig12874.5768.1

>prot_M-pyrifera_M_contig12874.5768.1 ID=prot_M-pyrifera_M_contig12874.5768.1|Name=mRNA_M-pyrifera_M_contig12874.5768.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=478bp
MASRKQERQLQQAREAGQIEPEMDTETGKMINPHNPEFITKRPWYLGESG
PSLVHHSKQKVDEVLTMKKADEIMHQRWASKKKAAAGYRKGACKNCGAMG
HKASECVERPRSLKKTAARTGMDIAPDDIHADLTSHGKVSFDAKRDRWLG
YHPDQHKFTIDRFNKIDQERRRSRREATEKQEERRKAKEKLREIKKAAKA
TKTATAAAAAAAAAAGGGSGGGSGATGTGSGTAANGKAASDSDDLDDSDV
AGGGKGKDSEKDSDEDTGSDSDASDYDSDEDGGSEDEDNREFVQKDVEQR
DFQGRVARQGGLGGAQMKTTVRNLRIREDRAKYLYNLDPNSAYYDPKTRA
MRDNPMPEANMEDLVFAGDNFIRYTGDVREHARTSVFAWEAADRGQEVHP
VADPSQAEMLRKKFDDKKTTLKEEQKQRILDKYGGSEHLDIPDARLLVGQ
TESYVEYDRTGRVVKGAPKVIGWFHVR*
back to top

mRNA from alignment at M-pyrifera_M_contig12874:942..8898-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig12874.5768.1 ID=mRNA_M-pyrifera_M_contig12874.5768.1|Name=mRNA_M-pyrifera_M_contig12874.5768.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=7957bp|location=Sequence derived from alignment at M-pyrifera_M_contig12874:942..8898- (Macrocystis pyrifera P11B4 male)
ATGGCGTCCAGAAAGCAGGAGCGGCAGCTCCAGCAGGCCCGTGAGGCTGG CCAGATCGAGCCCGAGATGGACACAGAGACCGGTAAGCAGCAGTACCCAC AGCAGTATAGGCCCACGAATAAGAAATAACCTGATAAGAGTAAGCATAAG AACGCGGGGCTCACGTATTGGAGGAAGTTAAGCATATTGAATAAAAAAAA TCGTGCTCAGCGGCGAGCGCTGCATTGAAATCCTGCGTAATCTCCTCGTA TGCTCAAGGTTTCTCGAGGGCGGTTGTTGCAAGTGGTATTGTTTGAGGCC CTGGCCTTGCTCAGAGTACTTGTACTCCGGGTACGACGTACAGGGCTTTT TTTAATGGCTTCTACAATACGAGTATACCAGGGTACATGATAAGTAGACT TGGGCAGCAATCGACTACTGCGAGTGCCGCAGAAGGCGTACACCAGCACG GGGCCTCTACTTTTAATAAGGAACCGGGATGGTGGCGCAGACGATATTTC TTGTTTGCAGAGCTATTGATGGGCACGGCTTAACTTACTGCTTGTAAGTC GCCAACTACAGGCAGTAGCTGTCAGTCGGATTGATAGCTACCATGTAGAG GTTGACCGGAGGTGGCGACTGTCCGACTTGCTGGGTTTTCAAAGTTGTTG GAAGGGTTCTTGAATTCGGGATGCCTGGTACATTTTTTTTCGTGGGGGCG GCCCCCCTCGGCCCGGGGGGGGGGTTCTGATTTGGCTCGGTAAGTCGGCA AGTCGACTGGCCATAAGGTGACTTCGCCGGGCGACGTGTGACTTCGCCAA CCAACTCACCGACTGAAGTCAGTCACCAGGTATTAAATAGTTGGTTAACG GCACCTACCGACTAACTACAGTATTTGTGCAATCCTGCCGACTCTAGTCT GTTCTGATTTTGGTACAGGAACAGCGGTGTGATACTCCTGCTACAGGCCA GGGGCGTGCTCTGCTGTGCGAGTAGGGTGTGTGACTCAATATCAAGGTTG TGCGTTCTAATCATATCGACTTGTAGAGGACGAGAGGAAAGCGAAGTTTT CGCTTCCTTGAGGAAAGTCGCTCAGATTCAACACGGCGTGACTTGTAAAC CAACATCTACGAAGCAGCAGCAGCAGCAGCAGCAGCACGCATATCGTGGT GAATGCGAGCTCCACGTACCGGCAGCGAGTACCGACACTCCATGTATCGC GTATCGTTGGTGGTGGTGGTGGTGGTGGTGGTGTTGGTGGTGTTAGTGAT GGTGCTGTTGGTGTTGATGTTGGTGTTGGTGTTGGTGATGGTGTTGGTGT TGGTGTTGGTGTTGGTGTTGGTGTTGGCGTTGGTGTTGGTGTTGGTGTTG GTATTGTTGTAGCTGCTGCTGTTGGTGGTGTTTCTCCTGGTGTTGGTGTG TTGGTGCTGGAATTGTTATTGTGTTTGCTCGATCACGCGGCCTTTCGTTT CGCCACCAACCCCCCCCCGCGCTCCTCTCCCTCCTATCTCCCTGACACCC GCAGGCAAGATGATCAACCCCCATAACCCGGAGTTCATCACCAAGAGGCC TTGGTACCTTGGCGAGTCCGGCCCCTCCCTCGTCCACCACAGCAAACAGA AGGTGGATGAGGTTCTCACTATGAAGAAAGCGGATGAGATTATGCACCAA CGATGGGCCTCGAAGAAGAAAGCCGCCGCCGGTTACCGCAAGGTGGGCTG GCTGTTCGTTTTTTCTATTATTTAAAGTTTGCCGACGCTGTTGAGTCTGT TGGTGGTTCGTTTGGTTGATCATCTTCTTGTTAACGTCTTGTTTTTGTTT TTTGTGTGAGATCTTCGAATCTTGTTGACATTTCGTTGGCATCGTGTTGG AATCTTTGTTGACATGTCGTCGGCATCTTTGTTGAAGCCTAATCTTGTTC ATGTGTGGTTGGCATCCTTGTTGATATATTGATTATGGAACGAGCATAGC AACAGCCGTCGACATGAGGTCAATTGATATATTGTTGGTATCTTTTGTTG AAATATTAGTCTTGCTAAAACTTTGTTGATAATCTTGTTGACGTTTTGTT GAGGTATTTGTGTTCGAGCGGCGTTCTTCTTGTTGAATGCTGTACGTCGG TAGCGATACGTCGGTTGGAGTGCGTCGGTATGCCTTGAACGACGAACCCG ACCTGGCCGTGTGGGTGCAAGTCCTAAGGCTAAATGCTGAAAAACAGAAG AAAGGCTCGATTTATCTTTTGTTGTTGTTTCCGCTTTTGTCCGTTGTTGA TATTTTCTGTTTTTTTTTGTTTGTTCTTATTTCTGCTTTTGTCTGTTGTT GATATTCTGTTTGGTTTTCTGATTTTCACTGGTTTTCGCTGGTTGTCCTA TACTGCACCGCACTCCCCCCCCCTCCCGCATGGTTCTGAAACGATCGTGG AACTCTTCTCGCAGGGCGCCTGCAAGAACTGCGGCGCGATGGGGCACAAA GCTTCCGAATGCGTGGAACGCCCCCGCAGCTTGAAAAAAACGGCCGCGAG GACGGGGATGGACATCGCCCCCGACGATATACACGCCGACCTCACGTCGC ACGGGAAGGTGAGGAGCCACGGTGGTGCTAGCCTTATTCGTGGTGATCTT GGTGGTGGTGGTGGGGATGCAGGTGGGGGTTGGGGGTTGGGGGCGGGCGG TGGAGGTGGGGGGATGATGAGGCTGGTGGGGGTGGCGGTGTTGGTGTTGA TGGTGGTGGGGCTGGTGGTGGGGCTGGTGGTGGGAGTGGTGGGGGGGTAC CGATATCATGCGTGGTCGTAGTCGTATGATCATAGACCCTCGCATCCCCA CAATGCCGGGACGGAGAATGTTGGGCTTGTACCGACCAGGCAGACATTGC TCCCACCAAGCTGGGGGCGGGGCCCCTCTTGCTAAGACTCTCTCTCTAGA CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCCT CTCTCTTTTTGTCTCTCCTCTCTCTACTTCCCTCTCAAATACTGTCTACC CCCCCCCCCGCGCCTCTCACCACTCTCTTCTCCCTCGCCTCCCTCGCCTC CCACGCTGACTGCGGATCAGGTGTCGTTCGACGCGAAGAGGGACCGCTGG CTGGGGTACCACCCGGACCAACATAAGTTCACGATCGATCGCTTCAATAA GATTGACCAGGAGAGGAGGAGGTCGCGGCGAGAGGCCACGGAGAAACAGG AGGAGAGGCGTAAGGTACGTTGCCAACGGAAGCATTGGATGGGATAGGGC GGGTCGGGATCGGACGGGCGGAGACGGGATGGGATGGGACGGGATGGGAC GGGACGGGATGGGATGGGATGGGATGGAAGGGAACGCAATGGGATGATAT GGGATGGTACGGGATGGACGTGATGCGGTGGGGTGAAGTGGAGTTGGATG GTGGGACGGGATCGGATGGGATGGGGTGGGCTGGTATGGGATGGCTTGGG GCGGGATGAGACGGGGTATGGTTCTATGTGTTTCTTTCTTTCGTGTTTCT TTCGTACAGCTGCCGCTGCCGACAGTATGTTTCCTTCCTCCGTAACTTTC CGTTGCTTGGTTTCAGAGTCGCTCCTGACTGAAAAAAACTTGCTTTCTGT GTCTCCCCGTTCCCCTCTCTCTATATTTTGTCCCGCTTTGTCCCTCTGTC TTCCCCTCTCTCCCGTTCTCTCTTGCCCCCTCTCTCCCTACTCCTCTCTG TCAATGGGTCGGTCGTCATCATCAGGCGAAGGAAAAATTGCGGGAAATCA AGAAGGCTGCCAAGGCCACCAAGACGGCGACTGCCGCCGCCGCCGCCGCA GCAGCAGCAGCCGGCGGTGGAAGCGGCGGTGGAAGCGGTGCGACCGGTAC CGGTTCGGGAACCGCCGCGAACGGGAAGGGTAAGGGGGGAGCGGCAGCAG CGGCGGCGGCAGCGGCGGCAGCGGCGGCAGCAGCAGCAGCGGCGTCCGAC AGCGATGACCTCGACGACAGCGATGTCGCGGGCGGCGGCAAGGGGAAGGA TAGCGAAAAGGACAGCGATGAGGACACGGGGTCCGATTCGGACGCGTCCG ACTACGATTCGGACGAGGACGGGGGGTCGGAAGATGAGGACAACAGGGAG TTCGTGCAGAAGGACGTGGAACAGAGGGATTTCCAGGTGAGATCTTCGGC GTTTTGTTTTGACGTCGGTCGAACGGAGGGATTTCCGTGTGATATTTTGG CGTTTTTTTGTCAATGTGGAACACAAGTATTTTCCAGGTGACGTTTTTGC GTTTCTGTTTCGACGTGAAATGGAAGGGTTTCCAGGTGTTTCGTTGGCGC TTTTATCTGGTAAACCCATGTGCGACTGGACGCGTTTGTTTTGGTACAAA CTACTTGGAACTGCGGTTGGAGATGTTTGGCAGCAGGAAAATGGTGAAGG GGTGAGGCGGCGGATTAGCGGGGGGAGGGGGGATCGGATTTTTACGCGCT CTGCCACAATGCATGTATGCGTGCGCCCATGGCTGCTTTGCAAGGCTCAG GCCCTTTTGCCAGTAACGCCTGCCGAAAATGGTTTGTCACTCCCCCGTAC AAGAGACGCGTTTTATTTTCCGCTCGAGAGTTATTTTTATTTTCTGTGGC GATGCGCTTTCCGGGGGGTAGGGGGACATCCCGCGGCAAGGATTGCACTT TTCGGCTCGGTGTTTTCTGGTACCAGTTTGAGCTCCTCGAGAAAAGCTAC CTGCTACCGGTTAGAGAGCGCTTTTTTTAATACAGTTAGTACGAGTGTAT TCGTTGTAGGACTGACTAGCCTTGGAAATTTTGGGCGGATGGCGTGAACA CACTTCTTCGAGGCCTTTGTTTCAGTAGTGACGTTGAGCCCCTCATATCA GGAGCTCAGAAGATAACAAGGCGCCACCCATGCTATCGTTCGGGGATAGG GGAATGAAGACATACAAGCAGTAGACTCTTTTGCTACTAGAATTTGCCTT GGGACGGCTTCTCTCGTCCGGTACAGGAGACGTTTCCCCCCCCCCCCCCT CCGCCTTTGATCTTTTATGTCGGGGGGTGGTTTGCGAGAGGGGTGGGGGC GGGGTCGTCTACTGAGGAAAGCCGCGCGCGGCTGCGAAACATGCACGCCA TGAAAATGTGGACGCGACAGTGTGCATCGTGCGTATGTAGCCGTCCACGC GTACGCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCGCCCCCC CCCCCCCCGCCCCGCGCGCCGCGCCCGCCCCCAGCGGCCGCTCTCGCGCG CTCCCCCCCCCCCCCCCCCCCCCCCCCCTCTGTCAGATGTTCGTTCCCCT ACAGTGAAGTGGAAAGCGCCTCCAATAGGGGAGGTCTGGTTTGCCCCCCC CCCCCCCCACTCCTCACGCCCGCACGCACACACAGCCTCGAGAGGCCCCA CATGTTGGGTCACGCACTGCGGTGATTTTCCATCAGTTCCCGCAATGCGT AGATCTCGAAAGCCGCCCCCCCCCCCACCCCCCCACCCCCCCCGCCCCAC CCCCCCCCCCCCCCCCCCCCACCCCCACATTTTCCCGCCCTTTCCCCCCC CCCCTCCCCCCTCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC TATAAATAACGCGTTTTCCGTGAACATAACTATATTGTGACAGGGTCGGG TGGCCCGCCAGGGTGGCCTGGGAGGTGCCCAGATGAAGACTACGGTCCGA AATCTGCGTATTCGAGAAGACAGGGCCAAGTACCTCTACAACCTCGACCC TAACTCGGCGTACTACGACCCGAAGACGCGTGCCATGCGTGACAACCCGA TGCCGGAGGCGAACATGGAGGACTTGGTCTTTGCCGGCGACAACTTCATC AGGTGACGATAATAGGAGGCCCTTTGGACTAGATTGGGGGCTTTGGGGTC TGGGGTGGGATCTGCTTTTGTTTGCGTTGTGCTTCGTACGCGTGTACGTT TTTTCGATTCGTTTTCAATTTCGCTTCTTTCTTTTCCCCCCCCCCCCTTT TTTTTCAGTTCCGCTCTCAGTTTCGATTTCACCTACCTGGTATGTTTTTT TGTTTTCTTGCTCGTTTTCGTCTTGTTTTAATTTTAATTTTAATTTTCGT TCTGGTCTTTGTTTTCGTGTACGTTTTTGTTTTCGTAGTCGTTTTTTTTG TTTTTGTTTTTTTTTTTCCCCCTTTTTCGTCTTCATGTTCATGTTCATTT TCGTTTTCGTTTTCGTTTTCGGTTTTGGTTTTCGTGTTCGTCCTCCGGCA GGTACACCGGGGACGTCCGCGAGCACGCGCGAACGTCGGTGTTTGCCTGG GAGGCGGCAGACCGAGGACAAGAGGTCCATCCGGTGGCAGACCCTAGCCA GGCGGAGATGCTGCGGAAGAAGTTCGACGACAAGAAAACCACGCTCAAGG AGGTGTGGAGAAGCAAGGCGGATTTTCGTTCGTTTGTTTGTTTGTGTCAC GCCTGAACCCGTCGAAATCGCGCTTCCGCTTGTGCTATTACGGAGGACCA TAGTAAATAGGACCTACAGTACACACAAAACCTATATATTTACCTGTTTT TGCTAACAATATTTGGTCCTATTTACTATGGTCCCTCGTAATAGGTACCA GGGGTAAACGCAGCGTTTTCTGGACATGCGCTCGTAGCTATCACCACTTG TGACCGTATATGGAGTTGTATATTTTGGGTGGCATGCATGGTTTGCATGC TGTGTGCATGGTGCTGTTTGCGTACGTTGCACCGGTGAAATCAGCACGCC TTTGACCAACCCCGTGTACGCCGCGCATCCGCTTGTTGTCTCGTGTGTCA CTCACCACGACCGAAAACGGCGCATTCTGGACAAGTTGTTGTTGGCCGTT TCTTGCGCGGGATGTATGATTTGTATGTTATCACTGTGTCCCGAAAATAC GAGGACAGTTTGTACTATGGTAAACAGTGGTCCCTCTGGTTCCGGTTGAG TGGTATATGGTGCCGGCTGCCGGCTATATTGCCGGTGAGATCGCTTTCGG GTATCAATGGGATTCAACCGGTGTTGCAGCGTGCGGAGCAATTAATGCCG GTTGCCGCCATAATGCCGGTTTCGTTGGTTGGCGCGTGTATACCGGCTCT ATAGAGGGACTGGCAATACTGTACATTATTCTTTATACTAAGCGGTCCTT ATGTTTACGCGTACAGTGGTAGTTGTGTATGGTATGTATCATTTCGTGAC AGAAGCGGATGTGGTATATGTGTATATGTGTCGTTTCGGGACGTGGTTGT ATACGAGATGTATACCATCGAGACATGGGTTTATATGGTGTGTATATTAT CGGGACATGGCTGCATATGATACCAGGTATGTATAATACCAGCACAATGC AGTAGTTGTGTATGGTACATACAATATCGAGACATATTGTTAGTTGTATA TGGTACATACAATATCGAGACATATTGGTAGTTGTATACGATATATATAA TATCGGGACAATGTTCTATATGATATGTATAATATCGGGACAAAGTTGTA TACGATATATATAACATCGGGACAATGTTCTATATGATATGTATAATATC GGTACAAAGTTGTATACGATATATATAACATCGGGACAATGTTCTATATG ATATGTATAATATCGGGACAATGTTATATACGATATGTATAATATCGGGA CAAAGTTGTATACGATATGTATAACATCGGGACATGATTTGTCTATATGA TATGATAGGAATCATTTCGTTTTCGCTATATCTGTGAAATCAACACGCCT AAAAAAACCCGTCGATATCGCGCTCACCCTTTGTACCACCAGGAGCAAAA GCAGCGCATTCTGGATAAATACGGCGGTTCGGAGCACCTCGACATTCCAG ACGCGCGGCTGTTGGTGGGGCAGACGGAGAGCTATGTCGAGTACGACAGA ACCGGACGGGTCGTCAAGGGCGCGCCGAAGGTGATTGGTTGGTTTCATGT CCGCTGA
back to top

Coding sequence (CDS) from alignment at M-pyrifera_M_contig12874:942..8898-

>mRNA_M-pyrifera_M_contig12874.5768.1 ID=mRNA_M-pyrifera_M_contig12874.5768.1|Name=mRNA_M-pyrifera_M_contig12874.5768.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=2868bp|location=Sequence derived from alignment at M-pyrifera_M_contig12874:942..8898- (Macrocystis pyrifera P11B4 male)
ATGGCGTCCAGAAAGCAGGAGCGGCAGCTCCAGCAGGCCCGTGAGGCTGG
CCAGATCGAGCCCGAGATGGACACAGAGACCGATGGCGTCCAGAAAGCAG
GAGCGGCAGCTCCAGCAGGCCCGTGAGGCTGGCCAGATCGAGCCCGAGAT
GGACACAGAGACCGGCAAGATGATCAACCCCCATAACCCGGAGTTCATCA
CCAAGAGGCCTTGGTACCTTGGCGAGTCCGGCCCCTCCCTCGTCCACCAC
AGCAAACAGAAGGTGGATGAGGTTCTCACTATGAAGAAAGCGGATGAGAT
TATGCACCAACGATGGGCCTCGAAGAAGAAAGCCGCCGCCGGTTACCGCA
AGGCAAGATGATCAACCCCCATAACCCGGAGTTCATCACCAAGAGGCCTT
GGTACCTTGGCGAGTCCGGCCCCTCCCTCGTCCACCACAGCAAACAGAAG
GTGGATGAGGTTCTCACTATGAAGAAAGCGGATGAGATTATGCACCAACG
ATGGGCCTCGAAGAAGAAAGCCGCCGCCGGTTACCGCAAGGGCGCCTGCA
AGAACTGCGGCGCGATGGGGCACAAAGCTTCCGAATGCGTGGAACGCCCC
CGCAGCTTGAAAAAAACGGCCGCGAGGACGGGGATGGACATCGCCCCCGA
CGATATACACGCCGACCTCACGTCGCACGGGAAGGGCGCCTGCAAGAACT
GCGGCGCGATGGGGCACAAAGCTTCCGAATGCGTGGAACGCCCCCGCAGC
TTGAAAAAAACGGCCGCGAGGACGGGGATGGACATCGCCCCCGACGATAT
ACACGCCGACCTCACGTCGCACGGGAAGGTGTCGTTCGACGCGAAGAGGG
ACCGCTGGCTGGGGTACCACCCGGACCAACATAAGTTCACGATCGATCGC
TTCAATAAGATTGACCAGGAGAGGAGGAGGTCGCGGCGAGAGGCCACGGA
GAAACAGGAGGAGAGGCGTAAGGTGTCGTTCGACGCGAAGAGGGACCGCT
GGCTGGGGTACCACCCGGACCAACATAAGTTCACGATCGATCGCTTCAAT
AAGATTGACCAGGAGAGGAGGAGGTCGCGGCGAGAGGCCACGGAGAAACA
GGAGGAGAGGCGTAAGGCGAAGGAAAAATTGCGGGAAATCAAGAAGGCTG
CCAAGGCCACCAAGACGGCGACTGCCGCCGCCGCCGCCGCAGCAGCAGCA
GCCGGCGGTGGAAGCGGCGGTGGAAGCGGTGCGACCGGTACCGGTTCGGG
AACCGCCGCGAACGGGAAGGGCGAAGGAAAAATTGCGGGAAATCAAGAAG
GCTGCCAAGGCCACCAAGACGGCGACTGCCGCCGCCGCCGCCGCAGCAGC
AGCAGCCGGCGGTGGAAGCGGCGGTGGAAGCGGTGCGACCGGTACCGGTT
CGGGAACCGCCGCGAACGGGAAGGCGGCGTCCGACAGCGATGACCTCGAC
GACAGCGATGTCGCGGGCGGCGGCAAGGGGAAGGATAGCGAAAAGGACAG
CGATGAGGACACGGGGTCCGATTCGGACGCGTCCGACTACGATTCGGACG
AGGACGGGGGGTCGGAAGATGAGGACAACAGGGAGTTCGTGCAGAAGGAC
GTGGAACAGAGGGATTTCCAGCGGCGTCCGACAGCGATGACCTCGACGAC
AGCGATGTCGCGGGCGGCGGCAAGGGGAAGGATAGCGAAAAGGACAGCGA
TGAGGACACGGGGTCCGATTCGGACGCGTCCGACTACGATTCGGACGAGG
ACGGGGGGTCGGAAGATGAGGACAACAGGGAGTTCGTGCAGAAGGACGTG
GAACAGAGGGATTTCCAGGGTCGGGTGGCCCGCCAGGGTGGCCTGGGAGG
TGCCCAGATGAAGACTACGGTCCGAAATCTGCGTATTCGAGAAGACAGGG
CCAAGTACCTCTACAACCTCGACCCTAACTCGGCGTACTACGACCCGAAG
ACGCGTGCCATGCGTGACAACCCGATGCCGGAGGCGAACATGGAGGACTT
GGTCTTTGCCGGCGACAACTTCATCAGGGTCGGGTGGCCCGCCAGGGTGG
CCTGGGAGGTGCCCAGATGAAGACTACGGTCCGAAATCTGCGTATTCGAG
AAGACAGGGCCAAGTACCTCTACAACCTCGACCCTAACTCGGCGTACTAC
GACCCGAAGACGCGTGCCATGCGTGACAACCCGATGCCGGAGGCGAACAT
GGAGGACTTGGTCTTTGCCGGCGACAACTTCATCAGGTACACCGGGGACG
TCCGCGAGCACGCGCGAACGTCGGTGTTTGCCTGGGAGGCGGCAGACCGA
GGACAAGAGGTCCATCCGGTGGCAGACCCTAGCCAGGCGGAGATGCTGCG
GAAGAAGTTCGACGACAAGAAAACCACGCTCAAGGAGGTACACCGGGGAC
GTCCGCGAGCACGCGCGAACGTCGGTGTTTGCCTGGGAGGCGGCAGACCG
AGGACAAGAGGTCCATCCGGTGGCAGACCCTAGCCAGGCGGAGATGCTGC
GGAAGAAGTTCGACGACAAGAAAACCACGCTCAAGGAGGAGCAAAAGCAG
CGCATTCTGGATAAATACGGCGGTTCGGAGCACCTCGACATTCCAGACGC
GCGGCTGTTGGTGGGGCAGACGGAGAGCTATGTCGAGTACGACAGAACCG
GACGGGTCGTCAAGGGCGCGCCGAAGGTGATTGGTTGGTTTCATGTCCGC
TGAGAGCAAAAGCAGCGCATTCTGGATAAATACGGCGGTTCGGAGCACCT
CGACATTCCAGACGCGCGGCTGTTGGTGGGGCAGACGGAGAGCTATGTCG
AGTACGACAGAACCGGACGGGTCGTCAAGGGCGCGCCGAAGGTGATTGGT
TGGTTTCATGTCCGCTGA
back to top