mRNA_M-pyrifera_M_contig128682.5763.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig128682.5763.1
Unique NamemRNA_M-pyrifera_M_contig128682.5763.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig128682.5763.1 vs. uniprot
Match: A0A7C3EJD5_9BACT (SGNH_hydro domain-containing protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A7C3EJD5_9BACT)

HSP 1 Score: 136 bits (342), Expect = 2.960e-38
Identity = 63/118 (53.39%), Postives = 86/118 (72.88%), Query Frame = 1
Query:    1 IVFYAGDNDVARGKTAEQVTNDYKAFAAKVHEVLPEAKLIFVPIKPSTARWRLYPEMKKANDAIKALTDMDEREVFLEIEAHMLDDKGKPKKDLLLEDGLHMTDGGYQIWTDLVKPQL 354
            +VFYAGDND+A GK+ E+V  DYKAF  KVH+ L EAK+I++PIKPS ARW+L+ +MK AN  I      D+R  +L+I   ML + GKPK +L ++DGLH++  GY++WT L+KP L
Sbjct:   69 VVFYAGDNDIASGKSPEKVLEDYKAFVKKVHDKLAEAKIIYIPIKPSIARWKLWEKMKAANALIAEHVRTDKRLAYLDIVPGMLGEDGKPKPELFVKDGLHLSPAGYELWTALLKPLL 186          
BLAST of mRNA_M-pyrifera_M_contig128682.5763.1 vs. uniprot
Match: A0A850AM48_9BACT (SGNH_hydro domain-containing protein n=1 Tax=Calditrichaceae bacterium TaxID=2614252 RepID=A0A850AM48_9BACT)

HSP 1 Score: 134 bits (337), Expect = 7.940e-37
Identity = 63/119 (52.94%), Postives = 84/119 (70.59%), Query Frame = 1
Query:    1 IVFYAGDNDVARGKTAEQVTNDYKAFAAKVHEVLPEAKLIFVPIKPSTARWRLYPEMKKANDAIKALTDMDEREVFLEIEAHMLDDKGKPKKDLLLEDGLHMTDGGYQIWTDLVKPQLE 357
            IVFYAGDND+A GK+AE V  D++ F  +VH  LPE ++IF+PIKPS ARW  +PEMKKAN  I+A    DER  + +  A ML   GKP  +L +EDGLH++  GY++W+ ++KP LE
Sbjct:  111 IVFYAGDNDIADGKSAETVQADFRQFVERVHRSLPETRIIFLPIKPSLARWNFWPEMKKANGLIEAYCAGDERLFYADTAAPMLAGGGKPGSELFVEDGLHLSAAGYRLWSQVLKPVLE 229          
BLAST of mRNA_M-pyrifera_M_contig128682.5763.1 vs. uniprot
Match: A0A7V2UEA3_9BACT (SGNH_hydro domain-containing protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A7V2UEA3_9BACT)

HSP 1 Score: 130 bits (327), Expect = 1.290e-35
Identity = 58/119 (48.74%), Postives = 86/119 (72.27%), Query Frame = 1
Query:    1 IVFYAGDNDVARGKTAEQVTNDYKAFAAKVHEVLPEAKLIFVPIKPSTARWRLYPEMKKANDAIKALTDMDEREVFLEIEAHMLDDKGKPKKDLLLEDGLHMTDGGYQIWTDLVKPQLE 357
            +VFYAGDND+A GK+ EQV  D+KAF  KVH+ LP+ ++I++ IKPS ARW+L  +M+KAN  I      DER  F++++  M+ + G P+K+L ++DGLH++  GY++WT LV P L+
Sbjct:  102 VVFYAGDNDIAGGKSPEQVLEDFKAFVKKVHDKLPKTRIIYIGIKPSIARWKLVEKMRKANQLIADYIKGDERLRFVDVDKPMIGEDGMPRKELFVKDGLHLSPAGYELWTSLVLPFLK 220          
BLAST of mRNA_M-pyrifera_M_contig128682.5763.1 vs. uniprot
Match: A0A7V4TXX1_9BACT (SGNH_hydro domain-containing protein n=1 Tax=Caldithrix abyssi TaxID=187145 RepID=A0A7V4TXX1_9BACT)

HSP 1 Score: 130 bits (327), Expect = 2.230e-35
Identity = 60/119 (50.42%), Postives = 81/119 (68.07%), Query Frame = 1
Query:    1 IVFYAGDNDVARGKTAEQVTNDYKAFAAKVHEVLPEAKLIFVPIKPSTARWRLYPEMKKANDAIKALTDMDEREVFLEIEAHMLDDKGKPKKDLLLEDGLHMTDGGYQIWTDLVKPQLE 357
            IVFY GDND+A  K+AE+V ND++ F  KVH+ LP  K++F+PIKPS ARW+L+PEM KAN  IK         ++ +    ML+ KGKP++++ +EDGLHM D GY IW   + P LE
Sbjct:  117 IVFYCGDNDIADKKSAERVLNDFRVFVEKVHKKLPVTKIVFLPIKPSLARWQLWPEMNKANKLIKKYCKQQPFLMYCDTATPMLNKKGKPEENIFIEDGLHMNDKGYAIWNKTLSPLLE 235          
BLAST of mRNA_M-pyrifera_M_contig128682.5763.1 vs. uniprot
Match: A0A831WXN2_9BACT (SGNH_hydro domain-containing protein n=1 Tax=Gemmataceae bacterium TaxID=2052164 RepID=A0A831WXN2_9BACT)

HSP 1 Score: 129 bits (323), Expect = 5.160e-35
Identity = 56/118 (47.46%), Postives = 83/118 (70.34%), Query Frame = 1
Query:    1 IVFYAGDNDVARGKTAEQVTNDYKAFAAKVHEVLPEAKLIFVPIKPSTARWRLYPEMKKANDAIKALTDMDEREVFLEIEAHMLDDKGKPKKDLLLEDGLHMTDGGYQIWTDLVKPQL 354
            IV YAGDND+A GKTA QV +D++AFA  +H  LP+ ++ F+ IKPS ARW+L+ E K+AN  IK+  + D R +F+++   ML   GKP  DL ++DGLH+ + GY++W  +++P L
Sbjct:   96 IVLYAGDNDLAAGKTAAQVADDFRAFAQVIHRSLPQTRIYFLAIKPSPARWKLFEEQKRANSLIKSQCESDARLIFVDVATPMLGPDGKPNPDLFVKDGLHLNEQGYELWRKILQPHL 213          
BLAST of mRNA_M-pyrifera_M_contig128682.5763.1 vs. uniprot
Match: A0A2S8GIV2_9BACT (SGNH_hydro domain-containing protein n=1 Tax=Blastopirellula marina TaxID=124 RepID=A0A2S8GIV2_9BACT)

HSP 1 Score: 128 bits (322), Expect = 7.110e-35
Identity = 56/119 (47.06%), Postives = 83/119 (69.75%), Query Frame = 1
Query:    1 IVFYAGDNDVARGKTAEQVTNDYKAFAAKVHEVLPEAKLIFVPIKPSTARWRLYPEMKKANDAIKALTDMDEREVFLEIEAHMLDDKGKPKKDLLLEDGLHMTDGGYQIWTDLVKPQLE 357
            +V YAGDND+A   T E++ +D+  F AKVHE LPE K++F+ +KPS +RW L  +++  N  I A  +  +   F++++A ML + GKP+K+L   DGLHMTD GYQIWT LV+P+++
Sbjct:  100 VVVYAGDNDIAHKYTPERIRDDFLKFVAKVHEDLPETKIVFIAVKPSLSRWNLVDQVRATNRLIAAECEKSDLLTFIDVDAPMLGEDGKPRKELFKSDGLHMTDAGYQIWTKLVQPEIQ 218          
BLAST of mRNA_M-pyrifera_M_contig128682.5763.1 vs. uniprot
Match: A0A7C3SHJ5_9BACT (SGNH_hydro domain-containing protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A7C3SHJ5_9BACT)

HSP 1 Score: 130 bits (328), Expect = 7.550e-35
Identity = 60/119 (50.42%), Postives = 84/119 (70.59%), Query Frame = 1
Query:    1 IVFYAGDNDVARGKTAEQVTNDYKAFAAKVHEVLPEAKLIFVPIKPSTARWRLYPEMKKANDAIKALTDMDEREVFLEIEAHMLDDKGKPKKDLLLEDGLHMTDGGYQIWTDLVKPQLE 357
            IV YAGDND+A GKT EQV  DY+AF  KVH+ LP+ ++I++ IKPS ARW L  ++++AN  I A    D+R + + IE  ML   G PKK+L  +DGLH+++ GY+IW DL++P L+
Sbjct:  186 IVLYAGDNDLAAGKTPEQVAADYEAFVKKVHQTLPKTRIIYISIKPSIARWHLIEKIRQANALIAACAGKDDRLLVVNIEKAMLGPDGTPKKELFQKDGLHLSEAGYKIWADLLRPHLK 304          
BLAST of mRNA_M-pyrifera_M_contig128682.5763.1 vs. uniprot
Match: A0A7Y5SRW7_9BACT (SGNH_hydro domain-containing protein n=1 Tax=Pirellulales bacterium TaxID=2715253 RepID=A0A7Y5SRW7_9BACT)

HSP 1 Score: 128 bits (322), Expect = 8.550e-35
Identity = 58/119 (48.74%), Postives = 84/119 (70.59%), Query Frame = 1
Query:    1 IVFYAGDNDVARGKTAEQVTNDYKAFAAKVHEVLPEAKLIFVPIKPSTARWRLYPEMKKANDAIKALTDMDEREVFLEIEAHMLDDKGKPKKDLLLEDGLHMTDGGYQIWTDLVKPQLE 357
            IVFYAGDND+A GKT EQV +D+KAF  KV + LP  +++F+ IKPS  RW +  +M++AN  I+AL   DER  +++++A M+   GKP+ +L   DGLH++  GY+ W DLV+P L+
Sbjct:  106 IVFYAGDNDIAAGKTPEQVADDFKAFVGKVRDGLPRTRIVFIGIKPSIRRWAMVDKMREANRLIRALAAEDERLEYVDVDAPMIGHDGKPRAELFRSDGLHLSAEGYRRWADLVRPHLK 224          
BLAST of mRNA_M-pyrifera_M_contig128682.5763.1 vs. uniprot
Match: A0A7V4HV50_9BACT (SGNH_hydro domain-containing protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A7V4HV50_9BACT)

HSP 1 Score: 127 bits (318), Expect = 4.650e-34
Identity = 54/119 (45.38%), Postives = 79/119 (66.39%), Query Frame = 1
Query:    1 IVFYAGDNDVARGKTAEQVTNDYKAFAAKVHEVLPEAKLIFVPIKPSTARWRLYPEMKKANDAIKALTDMDEREVFLEIEAHMLDDKGKPKKDLLLEDGLHMTDGGYQIWTDLVKPQLE 357
            +V YAGDND+A GK+  QV  DY+ F AK+H  LP  +++++ +KPS ARW+L  +++  N  I+     D R VF+++E  ML   GKP+ DL L DGLH+   GYQ+W DL++P L+
Sbjct:  117 VVLYAGDNDLAAGKSPAQVLEDYRQFVAKIHAALPNTRIVYIGVKPSLARWKLIDKVRATNQQIREFAAQDPRLVFVDVEKPMLGPDGKPRADLFLRDGLHLNAKGYQVWADLLRPHLK 235          
BLAST of mRNA_M-pyrifera_M_contig128682.5763.1 vs. uniprot
Match: A0A7X7TYR9_9BACT (SGNH_hydro domain-containing protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A7X7TYR9_9BACT)

HSP 1 Score: 126 bits (316), Expect = 7.390e-34
Identity = 59/118 (50.00%), Postives = 78/118 (66.10%), Query Frame = 1
Query:    1 IVFYAGDNDVARGKTAEQVTNDYKAFAAKVHEVLPEAKLIFVPIKPSTARWRLYPEMKKANDAIKALTDMDEREVFLEIEAHMLDDKGKPKKDLLLEDGLHMTDGGYQIWTDLVKPQL 354
            IVFYAGDND+A GK+A QV  DY+ F A VH  LP A+++FV IKPS  RW L+P M +AN  I+ L D DER  F ++   +L   GKP+ +L L D LH+   GY++WT  ++P L
Sbjct:  104 IVFYAGDNDMAGGKSAPQVAEDYRKFVALVHAKLPAARIVFVAIKPSGQRWSLWPRMNEANSLIRDLCDQDERLFFADLATPLLGGDGKPRPELFLADQLHLNPQGYEVWTQTLRPVL 221          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig128682.5763.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7C3EJD5_9BACT2.960e-3853.39SGNH_hydro domain-containing protein n=1 Tax=Planc... [more]
A0A850AM48_9BACT7.940e-3752.94SGNH_hydro domain-containing protein n=1 Tax=Caldi... [more]
A0A7V2UEA3_9BACT1.290e-3548.74SGNH_hydro domain-containing protein n=1 Tax=Planc... [more]
A0A7V4TXX1_9BACT2.230e-3550.42SGNH_hydro domain-containing protein n=1 Tax=Caldi... [more]
A0A831WXN2_9BACT5.160e-3547.46SGNH_hydro domain-containing protein n=1 Tax=Gemma... [more]
A0A2S8GIV2_9BACT7.110e-3547.06SGNH_hydro domain-containing protein n=1 Tax=Blast... [more]
A0A7C3SHJ5_9BACT7.550e-3550.42SGNH_hydro domain-containing protein n=1 Tax=Planc... [more]
A0A7Y5SRW7_9BACT8.550e-3548.74SGNH_hydro domain-containing protein n=1 Tax=Pirel... [more]
A0A7V4HV50_9BACT4.650e-3445.38SGNH_hydro domain-containing protein n=1 Tax=Planc... [more]
A0A7X7TYR9_9BACT7.390e-3450.00SGNH_hydro domain-containing protein n=1 Tax=Planc... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig128682contigM-pyrifera_M_contig128682:2..358 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score122.5
Seed ortholog evalue1.4e-25
Seed eggNOG ortholog314230.DSM3645_25497
KEGG rclassRC00467
KEGG koko:K01179,ko:K01183
KEGG ReactionR01206,R02334,R06200,R11307,R11308
KEGG Pathwayko00500,ko00520,ko01100,map00500,map00520,map01100
Hectar predicted targeting categoryother localisation
EggNOG free text desc.GDSL-like Lipase/Acylhydrolase family
EggNOG OGs2IZAF@203682,COG2755@1,COG2755@2
EC3.2.1.14,3.2.1.4
COG Functional cat.E
CAZyGH18,GH5,GH9
Best tax levelPlanctomycetes
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Exons1
Model size357
Cds size357
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815799.8534014-CDS-M-pyrifera_M_contig128682:1..3581622815799.8534014-CDS-M-pyrifera_M_contig128682:1..358Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig128682 2..358 +
1692277575.0289464-CDS-M-pyrifera_M_contig128682:1..3581692277575.0289464-CDS-M-pyrifera_M_contig128682:1..358Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig128682 2..358 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig128682.5763.1prot_M-pyrifera_M_contig128682.5763.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig128682 2..358 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig128682.5763.1

>prot_M-pyrifera_M_contig128682.5763.1 ID=prot_M-pyrifera_M_contig128682.5763.1|Name=mRNA_M-pyrifera_M_contig128682.5763.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=119bp
IVFYAGDNDVARGKTAEQVTNDYKAFAAKVHEVLPEAKLIFVPIKPSTAR
WRLYPEMKKANDAIKALTDMDEREVFLEIEAHMLDDKGKPKKDLLLEDGL
HMTDGGYQIWTDLVKPQLE
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mRNA from alignment at M-pyrifera_M_contig128682:2..358+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig128682.5763.1 ID=mRNA_M-pyrifera_M_contig128682.5763.1|Name=mRNA_M-pyrifera_M_contig128682.5763.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=357bp|location=Sequence derived from alignment at M-pyrifera_M_contig128682:2..358+ (Macrocystis pyrifera P11B4 male)
ATCGTCTTCTATGCCGGCGACAACGACGTGGCCCGGGGCAAGACCGCCGA GCAAGTGACGAACGACTACAAGGCATTCGCCGCGAAGGTCCACGAGGTCC TGCCCGAAGCGAAGCTCATCTTCGTGCCCATCAAACCCAGCACGGCCCGG TGGCGCCTCTACCCCGAAATGAAAAAGGCCAACGACGCCATCAAGGCCCT CACCGATATGGACGAACGGGAAGTTTTCCTGGAAATCGAGGCCCACATGC TCGACGACAAGGGCAAGCCGAAAAAGGACCTGCTCCTGGAAGACGGGCTG CATATGACCGACGGGGGCTATCAGATCTGGACGGACCTGGTGAAGCCCCA GCTGGAA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig128682:2..358+

>mRNA_M-pyrifera_M_contig128682.5763.1 ID=mRNA_M-pyrifera_M_contig128682.5763.1|Name=mRNA_M-pyrifera_M_contig128682.5763.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=714bp|location=Sequence derived from alignment at M-pyrifera_M_contig128682:2..358+ (Macrocystis pyrifera P11B4 male)
ATCGTCTTCTATGCCGGCGACAACGACGTGGCCCGGGGCAAGACCGCCGA
GCAAGTGACGAACGACTACAAGGCATTCGCCGCGAAGGTCCACGAGGTCC
TGCCCGAAGCGAAGCTCATCTTCGTGCCCATCAAACCCAGCACGGCCCGG
TGGCGCCTCTACCCCGAAATGAAAAAGGCCAACGACGCCATCAAGGCCCT
CACCGATATGGACGAACGGGAAGTTTTCCTGGAAATCGAGGCCCACATGC
TCGACGACAAGGGCAAGCCGAAAAAGGACCTGCTCCTGGAAGACGGGCTG
CATATGACCGACGGGGGCTATCAGATCTGGACGGACCTGGTGAAGCCCCA
GCTGGAAATCGTCTTCTATGCCGGCGACAACGACGTGGCCCGGGGCAAGA
CCGCCGAGCAAGTGACGAACGACTACAAGGCATTCGCCGCGAAGGTCCAC
GAGGTCCTGCCCGAAGCGAAGCTCATCTTCGTGCCCATCAAACCCAGCAC
GGCCCGGTGGCGCCTCTACCCCGAAATGAAAAAGGCCAACGACGCCATCA
AGGCCCTCACCGATATGGACGAACGGGAAGTTTTCCTGGAAATCGAGGCC
CACATGCTCGACGACAAGGGCAAGCCGAAAAAGGACCTGCTCCTGGAAGA
CGGGCTGCATATGACCGACGGGGGCTATCAGATCTGGACGGACCTGGTGA
AGCCCCAGCTGGAA
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