mRNA_M-pyrifera_M_contig128666.5757.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig128666.5757.1 vs. uniprot
Match: A0A7S0WIA5_9CHLO (Ubiquitinyl hydrolase 1 n=1 Tax=Chlamydomonas leiostraca TaxID=1034604 RepID=A0A7S0WIA5_9CHLO) HSP 1 Score: 98.2 bits (243), Expect = 1.020e-20 Identity = 55/153 (35.95%), Postives = 86/153 (56.21%), Query Frame = 1
Query: 1 DLEVSVLGLSRLEQSLTQFLSPELLTGGERWHCEACGTRRDAEKGVTLTTLPPVLMIHLKRYIYDINRRAYVKHHAPFHFPDTLHLEPEKGVVEGAGSDEEGSSSPXXXXXXXXXXXXPYTLQAILIHHGTTGGGHYFAYVRRGKEEFVEFND 459
DL++ V G + + S ++ E+L+G +++ E G + DA+KGV LPPVL + LKR+ YD++R A VK + + F D L LEP + + GSS P Y L A+L+H G GGHY+A++R G+E+++ F+D
Sbjct: 326 DLQLDVRGCATIADSFLKYCEEEVLSGDNKYNAEGHGLQ-DAKKGVKFVDLPPVLQLQLKRFEYDMHRDAMVKINDRYEFSDVLDLEPHRAALFA------GSSDPSVPAR--------YKLFAVLVHSGGVHGGHYYAFIRPGREQWLRFDD 463
BLAST of mRNA_M-pyrifera_M_contig128666.5757.1 vs. uniprot
Match: A0A0R3WZH7_HYDTA (USP domain-containing protein n=1 Tax=Hydatigena taeniaeformis TaxID=6205 RepID=A0A0R3WZH7_HYDTA) HSP 1 Score: 96.3 bits (238), Expect = 5.030e-20 Identity = 53/173 (30.64%), Postives = 88/173 (50.87%), Query Frame = 1
Query: 4 LEVSVLGLSRLEQSLTQFLSPELLTGGERWHCEACGTRRDAEKGVTLTTLPPVLMIHLKRYIYDINRRAYVKHHAPFHFPDTLHLEPEKGVVEGAGSDEEGSS-------------SPXXXXXXXXXXXXPYTLQAILIHHGTTGGGHYFAYV-----RRGKEEFVEFNDAIV 468
++V + S L +SL +++ +LL G +HCE C + A K + + LPP+L+IHLKR+ +D R +K++ F FP L + P VEG S ++G S SP YTL+ +++HHG G GHY++++ GK ++ +++D V
Sbjct: 2025 IDVDIQNRSTLCESLEEYVKSDLLEGDNAYHCEDCNKKVSARKRMCIKRLPPILVIHLKRFNFDWERHIAIKNNDRFSFPSELDMAPY--TVEGVASRDQGPSVGESSGICESCPASPGAPETKAPRHSTRYTLRGVIVHHGQAGAGHYYSFILHHNHETGKSQWYKYDDTRV 2195
BLAST of mRNA_M-pyrifera_M_contig128666.5757.1 vs. uniprot
Match: UPI001CFD6BE6 (uncharacterized protein n=1 Tax=Naegleria lovaniensis TaxID=51637 RepID=UPI001CFD6BE6) HSP 1 Score: 90.5 bits (223), Expect = 4.930e-18 Identity = 54/165 (32.73%), Postives = 85/165 (51.52%), Query Frame = 1
Query: 1 DLEVSVLGLSRLEQSLTQFLSPELLTGGERWHCEACGTRRDAEKGVTLTTLPPVLMIHLKRYIYDINRRAYVKHHAPFHFPDTLHLEPEKGVVEGAGSDEEGSSSPXXXXXXXXXXXXPYTLQAILIHHGTTGGGHYFAYVRRGKEEFVEFNDAIVRPLSGAALE 495
DL++ V GL L+ S+ +F E L+G ++ CE C + DA+KG+ L P +L +HLKR+ D + +K + FP L + V A S +S YTLQ+++IH G+ GGGHY++Y + G + EFND+ V + + +E
Sbjct: 388 DLQLPVRGLKHLDASIAEFQFEECLSGVNQYFCEKCNCKVDAKKGIKLLRTPDILSLHLKRFDIDYTTFSRIKLNNQLVFPHVLDM---NKYVNSAAS----FTSNELDVESLEAKYNIYTLQSVVIHSGSAGGGHYYSYEKVGNHWY-EFNDSTVTKIEESQVE 544
BLAST of mRNA_M-pyrifera_M_contig128666.5757.1 vs. uniprot
Match: A0A6A5BMH9_NAEFO (USP domain-containing protein n=1 Tax=Naegleria fowleri TaxID=5763 RepID=A0A6A5BMH9_NAEFO) HSP 1 Score: 89.0 bits (219), Expect = 1.710e-17 Identity = 53/165 (32.12%), Postives = 83/165 (50.30%), Query Frame = 1
Query: 1 DLEVSVLGLSRLEQSLTQFLSPELLTGGERWHCEACGTRRDAEKGVTLTTLPPVLMIHLKRYIYDINRRAYVKHHAPFHFPDTLHLEPEKGVVEGAGSDEEGSSSPXXXXXXXXXXXXPYTLQAILIHHGTTGGGHYFAYVRRGKEEFVEFNDAIVRPLSGAALE 495
DL++ V L L+ S+ +F E L+G ++ CE C + DA+KG+ L P +L +HLKR+ D + +K + P FP L + S E S YTLQ+++IH G+ GGGHY++Y + G + EFND+ V + + +E
Sbjct: 400 DLQLPVRRLKHLDASIAEFQFEECLSGVNQYFCEKCNCKVDAKKGIKLLRTPDILSLHLKRFDIDYATFSRIKLNDPLVFPHVLDMNKHLNSAASFTSHELDIES-------LDSKHNIYTLQSVVIHSGSAGGGHYYSYEKVGNHWY-EFNDSTVTRIEESQVE 556
BLAST of mRNA_M-pyrifera_M_contig128666.5757.1 vs. uniprot
Match: A0A0L0DFW0_THETB (USP domain-containing protein n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0DFW0_THETB) HSP 1 Score: 87.8 bits (216), Expect = 4.510e-17 Identity = 49/163 (30.06%), Postives = 82/163 (50.31%), Query Frame = 1
Query: 4 LEVSVLGLSRLEQSLTQFLSPELLTGGERWHCEACGTRRDAEKGVTLTTLPPVLMIHLKRYIYDINRRAYVKHHAPFHFPDTLHLEPEKGVVEGAGSDEEGSSSPXXXXXXXXXXXXPYTLQAILIHHGTTGGGHYFAYVRRGKEEFVEFNDAIVRPLSGAAL 492
L + + + L +SL F+ E+L G ++ C AC DA K + + LPPVL++HLKR+ +D+ K ++ +P L + P ++E E G++ Y L+ +L+H G+ GHY++++R G E+ EFND +V P L
Sbjct: 1649 LSLEIKNKANLAESLELFVQGEMLDGANQYKCSACDAHVDAIKRLVIADLPPVLVLHLKRFDFDLMTLTRTKINSRLAYPHELDMAPY--MIEDP-EREPGATQ--------------YQLRGVLVHLGSADSGHYYSFIRTGSAEWFEFNDTLVEPFDARDL 1794
BLAST of mRNA_M-pyrifera_M_contig128666.5757.1 vs. uniprot
Match: A0A1I7Y633_9BILA (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Steinernema glaseri TaxID=37863 RepID=A0A1I7Y633_9BILA) HSP 1 Score: 86.3 bits (212), Expect = 1.410e-16 Identity = 55/172 (31.98%), Postives = 87/172 (50.58%), Query Frame = 1
Query: 13 SVLGLSRLEQSLTQFLSPELLTGGERWHCEACGTRRDAEKGVTLTTLPPVLMIHLKRYIYDINRRAYVKHHAPFHFPDTLHL-----EPEKG-------VVEGAGSDEEGSS---SPXXXXXXXXXXXXPYTLQAILIHHGTTGGGHYFAYVRR-GKEEFVEFNDAIVRPLS 480
S+ L ++LT F++PELLTG ++ C CG+ + EKG+ +T P L I LKR+ +D+ VK + FPD L L EP+ V + G D++ + + Y L +I++H G+ GGHYFAYV+ ++++ FND++V S
Sbjct: 238 SIGAFKTLREALTHFITPELLTGENKYSCGTCGSLQVGEKGLRITEFPYFLAIQLKRFDFDVGTGHRVKLNNRVSFPDILDLNDIIYEPDSAKKSYSDVVKKSTGEDDDEAGHELNQQLAKEMLARGQNVYELYSIMVHQGSPTGGHYFAYVKNMDQQKWFCFNDSVVTSAS 409
BLAST of mRNA_M-pyrifera_M_contig128666.5757.1 vs. uniprot
Match: A0A7S0JZZ6_CAFRO (Hypothetical protein (Fragment) n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A7S0JZZ6_CAFRO) HSP 1 Score: 79.3 bits (194), Expect = 4.010e-16 Identity = 38/83 (45.78%), Postives = 52/83 (62.65%), Query Frame = 1
Query: 10 VSVLGLSRLEQSLTQFLSPELLTGGERWHCEACGTRRDAEKGVTLTTLPPVLMIHLKRYIYDINRRAYVKHHAPFHFPDTLHL 258
+ V G E ++ +F ELLTGG++WHC++CG RRDA K +TL+ PPVLM+HLKR+ +D+ K F FP L L
Sbjct: 1 LEVRGSGTAEAAVRRFHGAELLTGGDQWHCDSCGKRRDAVKSMTLSAAPPVLMLHLKRFGFDMATMRRAKLMDSFLFPAELRL 83
BLAST of mRNA_M-pyrifera_M_contig128666.5757.1 vs. uniprot
Match: A9V5S8_MONBE (Predicted protein n=1 Tax=Monosiga brevicollis TaxID=81824 RepID=A9V5S8_MONBE) HSP 1 Score: 84.7 bits (208), Expect = 5.280e-16 Identity = 47/159 (29.56%), Postives = 77/159 (48.43%), Query Frame = 1
Query: 1 DLEVSVLGLSRLEQSLTQFLSPELLTGGERWHCEACGTRRDAEKGVTLTTLPPVLMIHLKRYIYDINRRAYVKHHAPFHFPDTLHLEP---------EKGVVEGAGSDEEGSSSPXXXXXXXXXXXXP--------YTLQAILIHHGTTGGGHYFAYVR 426
+L + V+ + ++L + E+ TG ++ C+ CG + DA K + TLPP+LM+ LKR+ YD+ VKH+ F FP L LEP E+ + A SD + ++ P Y LQ +++H G+ GHY+++ R
Sbjct: 1768 NLSLPVMSHDTMHEALLDSVQGEMFTGANQYRCQECGVKVDAMKRSCIKTLPPMLMVQLKRFGYDLQTFQPVKHNVRFEFPQELDLEPYTYGYLTQKERQEAQEAASDADNAADAVDLGPANSEGVSPAEIPPCCKYRLQGVVVHMGSASAGHYYSFSR 1926
BLAST of mRNA_M-pyrifera_M_contig128666.5757.1 vs. uniprot
Match: A0A0P1ACA6_PLAHL (Ubiquitinyl hydrolase 1 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1ACA6_PLAHL) HSP 1 Score: 84.3 bits (207), Expect = 6.940e-16 Identity = 52/146 (35.62%), Postives = 78/146 (53.42%), Query Frame = 1
Query: 1 DLEVSVLGLSRLEQSLTQFLSPELLTGGERWHCEACGTRRDAEKGVTLTTLPPVLMIHLKRYIYDINRRAYVKHHAPFHFPDTLHLEPEKGVVEGAGSDEEGSSSPXXXXXXXXXXXXPYTLQAILIHHGTTGGGHYFAYVRRGKE 438
DL++ V G L QS +++ ELL G ++ E G ++DA+KG+ TLPPVL I LKR+ YD R VK H F +P TL L+ + + + DE+ + Y L ++L+H G GGHY+ ++R GK+
Sbjct: 362 DLQLDVKGCKDLMQSFRKYVEVELLEGDNQYEAEGHG-KQDAKKGIEFLTLPPVLNIQLKRFEYDPMRDGMVKVHDRFEYPKTLVLD--EFIAQ---KDEKTKNDTSRYC---------YHLHSVLVHSGDVHGGHYYVFIRPGKQ 492
BLAST of mRNA_M-pyrifera_M_contig128666.5757.1 vs. uniprot
Match: A0A2P6NWC5_9EUKA (Ubiquitinyl hydrolase 1 n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6NWC5_9EUKA) HSP 1 Score: 84.3 bits (207), Expect = 7.210e-16 Identity = 55/163 (33.74%), Postives = 82/163 (50.31%), Query Frame = 1
Query: 4 LEVSVLGLSRLEQSLTQFLSPELLTGGERWHCEACGTRRDAEKGVTLTTLPPVLMIHLKRYIYDINRRAYVKHHAPFHFPDTLHLEPE--KGVVEGAGSDEEGSSSPXXXXXXXXXXXXPYTLQAILIHHGTTGGGHYFAYVRR-----GKE-EFVEFNDAIV 468
L + V G + +SL ++ ELL G ++HC C + DA K + LP L+IH KR+ +D+ +K + F FP ++LEP +G+ GS E S S Y L IL+H GT GGHY++++R GKE ++ +FND V
Sbjct: 1498 LSLDVKGKRSIYESLASYVQGELLEGDNKYHCSQCDKKVDAIKRTCIKKLPDNLIIHAKRFEFDLELMRRIKVNDYFEFPHEVNLEPYTLEGLNRREGSSENVSVS-------TDIDSYKYHLAGILVHTGTADGGHYYSFIREREAADGKERKWYQFNDTDV 1653 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig128666.5757.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig128666.5757.1 >prot_M-pyrifera_M_contig128666.5757.1 ID=prot_M-pyrifera_M_contig128666.5757.1|Name=mRNA_M-pyrifera_M_contig128666.5757.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=165bp DLEVSVLGLSRLEQSLTQFLSPELLTGGERWHCEACGTRRDAEKGVTLTTback to top mRNA from alignment at M-pyrifera_M_contig128666:6..500+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig128666.5757.1 ID=mRNA_M-pyrifera_M_contig128666.5757.1|Name=mRNA_M-pyrifera_M_contig128666.5757.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=495bp|location=Sequence derived from alignment at M-pyrifera_M_contig128666:6..500+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig128666:6..500+ >mRNA_M-pyrifera_M_contig128666.5757.1 ID=mRNA_M-pyrifera_M_contig128666.5757.1|Name=mRNA_M-pyrifera_M_contig128666.5757.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=990bp|location=Sequence derived from alignment at M-pyrifera_M_contig128666:6..500+ (Macrocystis pyrifera P11B4 male)back to top |