mRNA_M-pyrifera_M_contig128635.5749.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig128635.5749.1 vs. uniprot
Match: A0A354B5C9_9ACTN (Chromosome segregation protein SMC (Fragment) n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A354B5C9_9ACTN) HSP 1 Score: 166 bits (421), Expect = 1.560e-45 Identity = 97/165 (58.79%), Postives = 112/165 (67.88%), Query Frame = 1
Query: 1 VIANLEAEGARSRDDLEQVXXXXXXXXXXXXXXXXXXXXXXXDRARFQEDWGDGVPVPTGQAAEVRGELGALKASTERGAGEVDRLQSRLAELGERRTVLDRDAADRRNELGVLHDEEEPLVAAMEAAEAARLAADDAVTTLVAAQADADADHHRWVARAEALTL 495
VIAN+EAE AR R DL V DRA FQ +WGDGVPVPTGQA+EVRGELGA +A+ ERG E DRLQ++L EL ++R L+ DAA RR +LG LHDEEEPLVAA EAAE+AR A++ T A Q DA+ADHHRWVARAEALTL
Sbjct: 324 VIANMEAEAARCRADLVAVTNELDELGPDVERLAEEEATLARDRAAFQAEWGDGVPVPTGQASEVRGELGARRAAIERGKSESDRLQAKLTELEKKRQDLEADAARRRADLGALHDEEEPLVAAHEAAESARHVAEEQAATRQAEQIDAEADHHRWVARAEALTL 488
BLAST of mRNA_M-pyrifera_M_contig128635.5749.1 vs. uniprot
Match: A0A7X5WTS4_9ACTN (AAA family ATPase (Fragment) n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7X5WTS4_9ACTN) HSP 1 Score: 162 bits (411), Expect = 2.110e-43 Identity = 92/165 (55.76%), Postives = 113/165 (68.48%), Query Frame = 1
Query: 1 VIANLEAEGARSRDDLEQVXXXXXXXXXXXXXXXXXXXXXXXDRARFQEDWGDGVPVPTGQAAEVRGELGALKASTERGAGEVDRLQSRLAELGERRTVLDRDAADRRNELGVLHDEEEPLVAAMEAAEAARLAADDAVTTLVAAQADADADHHRWVARAEALTL 495
VIANLEAE AR RDDL +V DRA F+E+WGDGVPVP+ +AAEVRGELGAL+A+ ERG GE R+++ L EL ER L+ +A+ RR EL LH+EEEPLV A+EAAEA+R ADD + +A+ ADA+A+HHRW ARAEALTL
Sbjct: 324 VIANLEAEAARLRDDLARVDAGITGLVPDTERLEDAERHLAADRAAFREEWGDGVPVPSSRAAEVRGELGALRAAIERGHGEAGRVRAGLEELSERSRALEAEASARRAELAALHEEEEPLVLALEAAEASRREADDRLADRIASHADAEAEHHRWAARAEALTL 488
BLAST of mRNA_M-pyrifera_M_contig128635.5749.1 vs. uniprot
Match: A0A2D6U7B7_9ACTN (Chromosome partition protein Smc n=7 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2D6U7B7_9ACTN) HSP 1 Score: 147 bits (370), Expect = 8.640e-38 Identity = 89/165 (53.94%), Postives = 102/165 (61.82%), Query Frame = 1
Query: 1 VIANLEAEGARSRDDLEQVXXXXXXXXXXXXXXXXXXXXXXXDRARFQEDWGDGVPVPTGQAAEVRGELGALKASTERGAGEVDRLQSRLAELGERRTVLDRDAADRRNELGVLHDEEEPLVAAMEAAEAARLAADDAVTTLVAAQADADADHHRWVARAEALTL 495
VIAN+EAE AR R DLE V X DRA FQ +WGDGVP+PTGQA+EVRGELGA +A+ ERG E DRLQ++L EL ++R L+ DAA RR +LG LHDEEEPLVAA Q DA+ADHHRWVARAEALTL
Sbjct: 324 VIANMEAEAARCRADLEAVTNELDELGPDVERLAEXEATLARDRAAFQAEWGDGVPLPTGQASEVRGELGARRAAIERGKSESDRLQAKLTELEQKRQDLEADAARRRADLGALHDEEEPLVAAHXXXXXXXXXXXXXXXXXXXEQIDAEADHHRWVARAEALTL 488
BLAST of mRNA_M-pyrifera_M_contig128635.5749.1 vs. uniprot
Match: A0A3M2GZE6_ACTSX (Chromosome partition protein Smc n=1 Tax=Actinomyces sp. TaxID=29317 RepID=A0A3M2GZE6_ACTSX) HSP 1 Score: 117 bits (293), Expect = 1.950e-27 Identity = 87/165 (52.73%), Postives = 98/165 (59.39%), Query Frame = 1
Query: 1 VIANLEAEGARSRDDLEQVXXXXXXXXXXXXXXXXXXXXXXXDRARFQEDWGDGVPVPTGQAAEVRGELGALKASTERGAGEVDRLQSRLAELGERRTVLDRDAADRRNELGVLHDEEEPLVAAMEAAEAARLAADDAVTTLVAAQADADADHHRWVARAEALTL 495
VIANLEAE R R +LE+V XXXXXXXXX DRA F E WGDGVPVP+GQAAEVRG L AL A ERG E R+ RL L RR ++ R E+G LHD EEPLVAA+EAA A V A A+A ++ RW ARAEAL L
Sbjct: 324 VIANLEAEAERLRRELEEVTAAARALAPEHERXXXXXXXXXADRAAFAERWGDGVPVPSGQAAEVRGRLAALHAGLERGRAERARVAERLDHLAARRGDIEAAVGRHRAEIGRLHDSEEPLVAALEAATDRERRAAGTVAAATDAHAEAVSELDRWTARAEALAL 488
BLAST of mRNA_M-pyrifera_M_contig128635.5749.1 vs. uniprot
Match: A0A6I2XA48_9ACTN (Chromosome partition protein Smc n=2 Tax=root TaxID=1 RepID=A0A6I2XA48_9ACTN) HSP 1 Score: 98.6 bits (244), Expect = 7.430e-21 Identity = 68/165 (41.21%), Postives = 86/165 (52.12%), Query Frame = 1
Query: 1 VIANLEAEGARSRDDLEQVXXXXXXXXXXXXXXXXXXXXXXXDRARFQEDWGDGVPVPTGQAAEVRGELGALKASTERGAGEVDRLQSRLAELGERRTVLDRDAADRRNELGVLHDEEEPLVAAMEAAEAARLAADDAVTTLVAAQADADADHHRWVARAEALTL 495
V+A+LE+E AR +L V +R F+ +W GV PTG AAE+RGELGAL+A+ +RG E +R+ SR A L + +AA R EL EEPLV AME AEA AA AV + A++DHH W ARAEAL L
Sbjct: 324 VVASLESESARLAGELAAVEAEAEQFEPMTLELAAAQSALAAERLAFEAEWSAGVSAPTGAAAEMRGELGALRAAADRGREERERVASRSASLATKAEERAVEAARLRTELTEAEAAEEPLVEAMELAEARVAAATGAVEVAESDHRSAESDHHAWQARAEALAL 488
BLAST of mRNA_M-pyrifera_M_contig128635.5749.1 vs. uniprot
Match: A0A6I3F9U6_9ACTN (Chromosome partition protein Smc n=2 Tax=root TaxID=1 RepID=A0A6I3F9U6_9ACTN) HSP 1 Score: 97.8 bits (242), Expect = 1.380e-20 Identity = 65/165 (39.39%), Postives = 86/165 (52.12%), Query Frame = 1
Query: 1 VIANLEAEGARSRDDLEQVXXXXXXXXXXXXXXXXXXXXXXXDRARFQEDWGDGVPVPTGQAAEVRGELGALKASTERGAGEVDRLQSRLAELGERRTVLDRDAADRRNELGVLHDEEEPLVAAMEAAEAARLAADDAVTTLVAAQADADADHHRWVARAEALTL 495
V+A+LEAE AR +L +V +R F+ W GVP PTG AAEVRGEL AL+A+ +RG E DR+ SR+A L E+ L +A R +L E PLV ++AAE+ R A+ V + A++DHH W AR EAL L
Sbjct: 324 VVASLEAEAARLAAELSEVEDEASRFTPLADELLAAEGALADERQAFEAQWATGVPAPTGAAAEVRGELAALRAAADRGRSERDRVSSRVAALTEKTEQLAAEAERLRLDLVDAESAELPLVEQIDAAESRRSEAESKVGSAETVHRAAESDHHAWQARVEALAL 488
BLAST of mRNA_M-pyrifera_M_contig128635.5749.1 vs. uniprot
Match: A0A6I3C7K7_9ACTN (AAA family ATPase (Fragment) n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A6I3C7K7_9ACTN) HSP 1 Score: 97.1 bits (240), Expect = 2.450e-20 Identity = 63/165 (38.18%), Postives = 90/165 (54.55%), Query Frame = 1
Query: 1 VIANLEAEGARSRDDLEQVXXXXXXXXXXXXXXXXXXXXXXXDRARFQEDWGDGVPVPTGQAAEVRGELGALKASTERGAGEVDRLQSRLAELGERRTVLDRDAADRRNELGVLHDEEEPLVAAMEAAEAARLAADDAVTTLVAAQADADADHHRWVARAEALTL 495
V+ANLEA+GAR R DL+ R+RFQE+W GV P+G+A+E+RGELGAL+ S ER +GE RL+ R+A + ++ + + ELGVL E A+E AEA R A+ +V + ++AD +H W ARA+AL +
Sbjct: 324 VVANLEADGARLRSDLDTAELEAEALMPELDRLANAEVELDRARSRFQEEWAGGVAPPSGKASEIRGELGALRISVERSSGERTRLEQRVAAHADELGPIEAELIAVQAELGVLDAASESRRQAVEDAEAERDLAEHSVAAARSVLSEADTEHSSWNARADALAM 488
BLAST of mRNA_M-pyrifera_M_contig128635.5749.1 vs. uniprot
Match: A0A6J7AUC8_9ZZZZ (Unannotated protein n=1 Tax=freshwater metagenome TaxID=449393 RepID=A0A6J7AUC8_9ZZZZ) HSP 1 Score: 97.1 bits (240), Expect = 2.560e-20 Identity = 63/165 (38.18%), Postives = 90/165 (54.55%), Query Frame = 1
Query: 1 VIANLEAEGARSRDDLEQVXXXXXXXXXXXXXXXXXXXXXXXDRARFQEDWGDGVPVPTGQAAEVRGELGALKASTERGAGEVDRLQSRLAELGERRTVLDRDAADRRNELGVLHDEEEPLVAAMEAAEAARLAADDAVTTLVAAQADADADHHRWVARAEALTL 495
V+ANLEA+GAR R DL+ R+RFQE+W GV P+G+A+E+RGELGAL+ S ER +GE RL+ R+A + ++ + + ELGVL E A+E AEA R A+ +V + ++AD +H W ARA+AL +
Sbjct: 324 VVANLEADGARLRSDLDTAELEAEALMPELDRLANAEVELDRARSRFQEEWAGGVAPPSGKASEIRGELGALRISVERSSGERTRLEQRVAAHADELGPIEAELIAVQAELGVLDAASESRRQAVEDAEAERDLAEHSVAAARSVLSEADTEHSSWNARADALAM 488
BLAST of mRNA_M-pyrifera_M_contig128635.5749.1 vs. uniprot
Match: A0A5Q2RGT4_9ACTN (Chromosome partition protein Smc n=1 Tax=Actinomarinicola tropica TaxID=2789776 RepID=A0A5Q2RGT4_9ACTN) HSP 1 Score: 88.6 bits (218), Expect = 2.290e-17 Identity = 62/165 (37.58%), Postives = 77/165 (46.67%), Query Frame = 1
Query: 1 VIANLEAEGARSRDDLEQVXXXXXXXXXXXXXXXXXXXXXXXDRARFQEDWGDGVPVPTGQAAEVRGELGALKASTERGAGEVDRLQSRLAELGERRTVLDRDAADRRNELGVLHDEEEPLVAAMEAAEAARLAADDAVTTLVAAQADADADHHRWVARAEALTL 495
++ANLEAE AR ++L V DRARF DWG+GV P+G+AAEVRGELGAL +S ERG E+ R+ R R EL EEPLV ++ AE R A + A+ D RW ARAEAL +
Sbjct: 324 IVANLEAESARLDEELASVGQDAEALAPLMASLAEDEEALDADRARFDADWGEGVAPPSGRAAEVRGELGALVSSLERGETELARVDERXXXXXXXXXXXXXXXXXXRGELAAAEAAEEPLVGRLDGAERRRAIXXXXXXXXXDALSAAEGDRSRWQARAEALGM 488
BLAST of mRNA_M-pyrifera_M_contig128635.5749.1 vs. uniprot
Match: A0A6I3I947_9ACTN (Chromosome partition protein Smc n=15 Tax=root TaxID=1 RepID=A0A6I3I947_9ACTN) HSP 1 Score: 84.7 bits (208), Expect = 5.010e-16 Identity = 59/165 (35.76%), Postives = 78/165 (47.27%), Query Frame = 1
Query: 1 VIANLEAEGARSRDDLEQVXXXXXXXXXXXXXXXXXXXXXXXDRARFQEDWGDGVPVPTGQAAEVRGELGALKASTERGAGEVDRLQSRLAELGERRTVLDRDAADRRNELGVLHDEEEPLVAAMEAAEAARLAADDAVTTLVAAQADADADHHRWVARAEALTL 495
V+A+LEAE AR +L +V +R F+E W G+P PTG AAEVRGEL AL+ ++ R E DR+ +R L E+ L + R +L L E PLV +MEAAE+ R A ++ H W AR EAL L
Sbjct: 324 VVASLEAEAARLATELSEVESEAEGFAPLVAELADAEQLLAAERLAFEEQWSTGIPAPTGAAAEVRGELAALRTASGRAREERDRIATRATALAEKAAQLLTETESLRTQLIELESAELPLVESMEAAESRRSKAXXXXXXXXXXXXXXXSEQHAWRARVEALAL 488 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig128635.5749.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig128635.5749.1 >prot_M-pyrifera_M_contig128635.5749.1 ID=prot_M-pyrifera_M_contig128635.5749.1|Name=mRNA_M-pyrifera_M_contig128635.5749.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=165bp VIANLEAEGARSRDDLEQVEAELATLAPDLERLEAVERELAVDRARFQEDback to top mRNA from alignment at M-pyrifera_M_contig128635:5..499+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig128635.5749.1 ID=mRNA_M-pyrifera_M_contig128635.5749.1|Name=mRNA_M-pyrifera_M_contig128635.5749.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=495bp|location=Sequence derived from alignment at M-pyrifera_M_contig128635:5..499+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig128635:5..499+ >mRNA_M-pyrifera_M_contig128635.5749.1 ID=mRNA_M-pyrifera_M_contig128635.5749.1|Name=mRNA_M-pyrifera_M_contig128635.5749.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=990bp|location=Sequence derived from alignment at M-pyrifera_M_contig128635:5..499+ (Macrocystis pyrifera P11B4 male)back to top |