mRNA_M-pyrifera_M_contig128573.5738.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig128573.5738.1 vs. uniprot
Match: W5LY55_LEPOC (60S ribosomal protein L11 n=7 Tax=cellular organisms TaxID=131567 RepID=W5LY55_LEPOC) HSP 1 Score: 187 bits (474), Expect = 1.780e-58 Identity = 91/117 (77.78%), Postives = 103/117 (88.03%), Query Frame = 1
Query: 1 VAIQAEQKDNKMMAIRVHKLCLNISVGESGDKLTRAAKVLEALAGQSPVYSKARLTVRQFSIRRNEKIAVHCTVRGQKALDIIEKGLKVREYELRENNFSDTGNFGFGVDEHIDLGI 351
+A QAE+K+N M +R+ KLCLNI VGESGD+LTRAAKVLE L GQ+PV+SKAR TVR F IRRNEKIAVHCTVRG KA +I+EKGLKVREYELR+NNFSDTGNFGFG+ EHIDLGI
Sbjct: 1 MADQAEKKENPMRELRIRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKARYTVRSFGIRRNEKIAVHCTVRGAKAEEILEKGLKVREYELRKNNFSDTGNFGFGIQEHIDLGI 117
BLAST of mRNA_M-pyrifera_M_contig128573.5738.1 vs. uniprot
Match: A0A2U9CX81_SCOMX (60S ribosomal protein L11 n=2 Tax=cellular organisms TaxID=131567 RepID=A0A2U9CX81_SCOMX) HSP 1 Score: 184 bits (468), Expect = 3.560e-58 Identity = 89/117 (76.07%), Postives = 102/117 (87.18%), Query Frame = 1
Query: 1 VAIQAEQKDNKMMAIRVHKLCLNISVGESGDKLTRAAKVLEALAGQSPVYSKARLTVRQFSIRRNEKIAVHCTVRGQKALDIIEKGLKVREYELRENNFSDTGNFGFGVDEHIDLGI 351
+A Q E+K+N M +R+ KLC+NI VGESGD+LTRAAKVLE L GQ+PV+SKAR TVR F IRRNEKIAVHCTVRG KA +I+EKGLKVREYELR+NNFSDTGNFGFG+ EHIDLGI
Sbjct: 1 MAEQGEKKENPMKELRIRKLCMNICVGESGDRLTRAAKVLEQLTGQTPVFSKARYTVRSFGIRRNEKIAVHCTVRGAKAEEILEKGLKVREYELRKNNFSDTGNFGFGIQEHIDLGI 117
BLAST of mRNA_M-pyrifera_M_contig128573.5738.1 vs. uniprot
Match: A0A3B4TZ39_SERDU (60S ribosomal protein L11 n=1 Tax=Seriola dumerili TaxID=41447 RepID=A0A3B4TZ39_SERDU) HSP 1 Score: 185 bits (470), Expect = 4.480e-58 Identity = 90/117 (76.92%), Postives = 102/117 (87.18%), Query Frame = 1
Query: 1 VAIQAEQKDNKMMAIRVHKLCLNISVGESGDKLTRAAKVLEALAGQSPVYSKARLTVRQFSIRRNEKIAVHCTVRGQKALDIIEKGLKVREYELRENNFSDTGNFGFGVDEHIDLGI 351
+A Q E+K+N M +R+ KLCLNI VGESGD+LTRAAKVLE L GQ+PV+SKAR TVR F IRRNEKIAVHCTVRG KA +I+EKGLKVREYELR+NNFSDTGNFGFG+ EHIDLGI
Sbjct: 1 MADQGEKKENPMRELRIRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKARYTVRSFGIRRNEKIAVHCTVRGAKAEEILEKGLKVREYELRKNNFSDTGNFGFGIQEHIDLGI 117
BLAST of mRNA_M-pyrifera_M_contig128573.5738.1 vs. uniprot
Match: A0A3B4BMC2_9GOBI (60S ribosomal protein L11 n=4 Tax=Percomorphaceae TaxID=1489872 RepID=A0A3B4BMC2_9GOBI) HSP 1 Score: 185 bits (470), Expect = 6.370e-58 Identity = 90/117 (76.92%), Postives = 102/117 (87.18%), Query Frame = 1
Query: 1 VAIQAEQKDNKMMAIRVHKLCLNISVGESGDKLTRAAKVLEALAGQSPVYSKARLTVRQFSIRRNEKIAVHCTVRGQKALDIIEKGLKVREYELRENNFSDTGNFGFGVDEHIDLGI 351
+A Q E+K+N M +R+ KLCLNI VGESGD+LTRAAKVLE L GQ+PV+SKAR TVR F IRRNEKIAVHCTVRG KA +I+EKGLKVREYELR+NNFSDTGNFGFG+ EHIDLGI
Sbjct: 1 MADQGEKKENPMRELRIRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKARYTVRSFGIRRNEKIAVHCTVRGAKAEEILEKGLKVREYELRKNNFSDTGNFGFGIQEHIDLGI 117
BLAST of mRNA_M-pyrifera_M_contig128573.5738.1 vs. uniprot
Match: Q9DFQ9_GILMI (60S ribosomal protein L11 n=1 Tax=Gillichthys mirabilis TaxID=8222 RepID=Q9DFQ9_GILMI) HSP 1 Score: 185 bits (470), Expect = 7.010e-58 Identity = 90/117 (76.92%), Postives = 102/117 (87.18%), Query Frame = 1
Query: 1 VAIQAEQKDNKMMAIRVHKLCLNISVGESGDKLTRAAKVLEALAGQSPVYSKARLTVRQFSIRRNEKIAVHCTVRGQKALDIIEKGLKVREYELRENNFSDTGNFGFGVDEHIDLGI 351
+A Q E+K+N M +R+ KLCLNI VGESGD+LTRAAKVLE L GQ+PV+SKAR TVR F IRRNEKIAVHCTVRG KA +I+EKGLKVREYELR+NNFSDTGNFGFG+ EHIDLGI
Sbjct: 1 MADQGEKKENPMKELRIRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKARYTVRSFGIRRNEKIAVHCTVRGAKAEEILEKGLKVREYELRKNNFSDTGNFGFGIQEHIDLGI 117
BLAST of mRNA_M-pyrifera_M_contig128573.5738.1 vs. uniprot
Match: A0A671L1E5_9TELE (60S ribosomal protein L11 n=13 Tax=cellular organisms TaxID=131567 RepID=A0A671L1E5_9TELE) HSP 1 Score: 185 bits (470), Expect = 7.230e-58 Identity = 90/117 (76.92%), Postives = 102/117 (87.18%), Query Frame = 1
Query: 1 VAIQAEQKDNKMMAIRVHKLCLNISVGESGDKLTRAAKVLEALAGQSPVYSKARLTVRQFSIRRNEKIAVHCTVRGQKALDIIEKGLKVREYELRENNFSDTGNFGFGVDEHIDLGI 351
+A Q E+K+N M +R+ KLCLNI VGESGD+LTRAAKVLE L GQ+PV+SKAR TVR F IRRNEKIAVHCTVRG KA +I+EKGLKVREYELR+NNFSDTGNFGFG+ EHIDLGI
Sbjct: 1 MADQGEKKENPMRELRIRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKARYTVRSFGIRRNEKIAVHCTVRGAKAEEILEKGLKVREYELRKNNFSDTGNFGFGIQEHIDLGI 117
BLAST of mRNA_M-pyrifera_M_contig128573.5738.1 vs. uniprot
Match: A0A8D0AAF7_SANLU (60S ribosomal protein L11 n=2 Tax=Perciformes TaxID=8111 RepID=A0A8D0AAF7_SANLU) HSP 1 Score: 184 bits (468), Expect = 8.750e-58 Identity = 89/114 (78.07%), Postives = 100/114 (87.72%), Query Frame = 1
Query: 10 QAEQKDNKMMAIRVHKLCLNISVGESGDKLTRAAKVLEALAGQSPVYSKARLTVRQFSIRRNEKIAVHCTVRGQKALDIIEKGLKVREYELRENNFSDTGNFGFGVDEHIDLGI 351
Q E+K+N M +R+ KLCLNI VGESGD+LTRAAKVLE L GQ+PV+SKAR TVR F IRRNEKIAVHCTVRG KA +I+EKGLKVREYELR+NNFSDTGNFGFG+ EHIDLGI
Sbjct: 4 QGEKKENPMRELRIRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKARYTVRSFGIRRNEKIAVHCTVRGAKAEEILEKGLKVREYELRKNNFSDTGNFGFGIQEHIDLGI 117
BLAST of mRNA_M-pyrifera_M_contig128573.5738.1 vs. uniprot
Match: A0A3P8Z712_ESOLU (60S ribosomal protein L11 n=1 Tax=Esox lucius TaxID=8010 RepID=A0A3P8Z712_ESOLU) HSP 1 Score: 184 bits (468), Expect = 9.940e-58 Identity = 89/114 (78.07%), Postives = 100/114 (87.72%), Query Frame = 1
Query: 10 QAEQKDNKMMAIRVHKLCLNISVGESGDKLTRAAKVLEALAGQSPVYSKARLTVRQFSIRRNEKIAVHCTVRGQKALDIIEKGLKVREYELRENNFSDTGNFGFGVDEHIDLGI 351
Q E+K+N M +R+ KLCLNI VGESGD+LTRAAKVLE L GQ+PV+SKAR TVR F IRRNEKIAVHCTVRG KA +I+EKGLKVREYELR+NNFSDTGNFGFG+ EHIDLGI
Sbjct: 3 QGEKKENPMRELRIRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKARYTVRSFGIRRNEKIAVHCTVRGAKAEEILEKGLKVREYELRKNNFSDTGNFGFGIQEHIDLGI 116
BLAST of mRNA_M-pyrifera_M_contig128573.5738.1 vs. uniprot
Match: Q9W6X8_ORYLA (60S ribosomal protein L11 (Fragment) n=1 Tax=Oryzias latipes TaxID=8090 RepID=Q9W6X8_ORYLA) HSP 1 Score: 185 bits (469), Expect = 9.950e-58 Identity = 90/116 (77.59%), Postives = 101/116 (87.07%), Query Frame = 1
Query: 4 AIQAEQKDNKMMAIRVHKLCLNISVGESGDKLTRAAKVLEALAGQSPVYSKARLTVRQFSIRRNEKIAVHCTVRGQKALDIIEKGLKVREYELRENNFSDTGNFGFGVDEHIDLGI 351
A Q E+K+N M +R+ KLCLNI VGESGD+LTRAAKVLE L GQ+PV+SKAR TVR F IRRNEKIAVHCTVRG KA +I+EKGLKVREYELR+NNFSDTGNFGFG+ EHIDLGI
Sbjct: 1 AEQGEKKENPMKELRIRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKARYTVRSFGIRRNEKIAVHCTVRGAKAEEILEKGLKVREYELRKNNFSDTGNFGFGIQEHIDLGI 116
BLAST of mRNA_M-pyrifera_M_contig128573.5738.1 vs. uniprot
Match: A0A673B444_9TELE (60S ribosomal protein L11 n=1 Tax=Sphaeramia orbicularis TaxID=375764 RepID=A0A673B444_9TELE) HSP 1 Score: 184 bits (468), Expect = 1.130e-57 Identity = 89/114 (78.07%), Postives = 100/114 (87.72%), Query Frame = 1
Query: 10 QAEQKDNKMMAIRVHKLCLNISVGESGDKLTRAAKVLEALAGQSPVYSKARLTVRQFSIRRNEKIAVHCTVRGQKALDIIEKGLKVREYELRENNFSDTGNFGFGVDEHIDLGI 351
Q E+K+N M +R+ KLCLNI VGESGD+LTRAAKVLE L GQ+PV+SKAR TVR F IRRNEKIAVHCTVRG KA +I+EKGLKVREYELR+NNFSDTGNFGFG+ EHIDLGI
Sbjct: 5 QGEKKENPMRELRIRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKARYTVRSFGIRRNEKIAVHCTVRGAKAEEILEKGLKVREYELRKNNFSDTGNFGFGIQEHIDLGI 118 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig128573.5738.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig128573.5738.1 >prot_M-pyrifera_M_contig128573.5738.1 ID=prot_M-pyrifera_M_contig128573.5738.1|Name=mRNA_M-pyrifera_M_contig128573.5738.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=117bp VAIQAEQKDNKMMAIRVHKLCLNISVGESGDKLTRAAKVLEALAGQSPVYback to top mRNA from alignment at M-pyrifera_M_contig128573:2..445- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig128573.5738.1 ID=mRNA_M-pyrifera_M_contig128573.5738.1|Name=mRNA_M-pyrifera_M_contig128573.5738.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=444bp|location=Sequence derived from alignment at M-pyrifera_M_contig128573:2..445- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig128573:2..445- >mRNA_M-pyrifera_M_contig128573.5738.1 ID=mRNA_M-pyrifera_M_contig128573.5738.1|Name=mRNA_M-pyrifera_M_contig128573.5738.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=702bp|location=Sequence derived from alignment at M-pyrifera_M_contig128573:2..445- (Macrocystis pyrifera P11B4 male)back to top |