mRNA_M-pyrifera_M_contig128211.5672.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig128211.5672.1 vs. uniprot
Match: A0A2E7K9I8_9PLAN (Uncharacterized protein n=5 Tax=Gimesia TaxID=1649453 RepID=A0A2E7K9I8_9PLAN) HSP 1 Score: 209 bits (531), Expect = 1.570e-59 Identity = 121/161 (75.16%), Postives = 122/161 (75.78%), Query Frame = 1
Query: 1 RGKLQALLKQRDRARQDFDKAIELTPEVPEVWISRGEYLESTGQDQAAVKDFEEVVQRDPQNSFAPQAAAQLLASSPDDKVRDGKRALEYAQQAARLIPEQKSLNMALLAAAYAELGQFDKAKEYNQNAIKYEQNYRSKKSYQNRQKLYDAGKPYRLKKRS 483
RGKLQALLKQRDRARQDFD DPQNSFAPQAAA+LLASSPDDKVRDGKRALEYAQQAARLIPEQKSLNMALLAAAYAELGQFDKAKEYNQNAIKYEQNYRSKKSYQNRQKLYDAGKPYRLKKRS
Sbjct: 1020 RGKLQALLKQRDRARQDFDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDPQNSFAPQAAAKLLASSPDDKVRDGKRALEYAQQAARLIPEQKSLNMALLAAAYAELGQFDKAKEYNQNAIKYEQNYRSKKSYQNRQKLYDAGKPYRLKKRS 1180
BLAST of mRNA_M-pyrifera_M_contig128211.5672.1 vs. uniprot
Match: A0A518A4A5_9PLAN (Lipoprotein NlpI n=2 Tax=Gimesia panareensis TaxID=2527978 RepID=A0A518A4A5_9PLAN) HSP 1 Score: 163 bits (413), Expect = 1.270e-43 Identity = 87/104 (83.65%), Postives = 96/104 (92.31%), Query Frame = 1
Query: 172 RDPQNSFAPQAAAQLLASSPDDKVRDGKRALEYAQQAARLIPEQKSLNMALLAAAYAELGQFDKAKEYNQNAIKYEQNYRSKKSYQNRQKLYDAGKPYRLKKRS 483
RDPQN FA Q AAQLLA+SPDD+ RDGKRAL +AQQAARL+PE+KS N+ALLAAAYAELGQFDKAKEYN+NAIK EQNYR K+SYQ+RQKLYDAGKPYRLKKRS
Sbjct: 1077 RDPQNYFAHQQAAQLLAASPDDQARDGKRALRHAQQAARLMPEKKSQNLALLAAAYAELGQFDKAKEYNENAIKDEQNYRLKRSYQSRQKLYDAGKPYRLKKRS 1180
BLAST of mRNA_M-pyrifera_M_contig128211.5672.1 vs. uniprot
Match: A0A517VHJ7_9PLAN (Tetratricopeptide repeat protein n=2 Tax=Gimesia algae TaxID=2527971 RepID=A0A517VHJ7_9PLAN) HSP 1 Score: 132 bits (331), Expect = 1.370e-32 Identity = 74/105 (70.48%), Postives = 87/105 (82.86%), Query Frame = 1
Query: 169 QRDPQNSFAPQAAAQLLASSPDDKVRDGKRALEYAQQAARLIPEQKSLNMALLAAAYAELGQFDKAKEYNQNAIKYEQNYRSKKSYQNRQKLYDAGKPYRLKKRS 483
Q D +N FA Q AA LLA+S D+K R+GKRA ++A+QAARL+ E+KS NMALLAAAYAEL +F KAKEYNQNAI+ E NYR K++YQNRQKLYDA KP RLKKRS
Sbjct: 1112 QLDSKNYFAHQKAALLLAASADNKARNGKRAFDHARQAARLLTEKKSSNMALLAAAYAELKEFSKAKEYNQNAIESESNYRLKRNYQNRQKLYDAKKPLRLKKRS 1216
BLAST of mRNA_M-pyrifera_M_contig128211.5672.1 vs. uniprot
Match: A0A517RDI2_9PLAN (Tetratricopeptide repeat protein n=2 Tax=Gimesia alba TaxID=2527973 RepID=A0A517RDI2_9PLAN) HSP 1 Score: 121 bits (304), Expect = 5.830e-29 Identity = 64/104 (61.54%), Postives = 87/104 (83.65%), Query Frame = 1
Query: 172 RDPQNSFAPQAAAQLLASSPDDKVRDGKRALEYAQQAARLIPEQKSLNMALLAAAYAELGQFDKAKEYNQNAIKYEQNYRSKKSYQNRQKLYDAGKPYRLKKRS 483
RDP++ A Q A LLA+SPDD+VRDGK+AL++AQQAA+L+P+QKS N+AL+A AYAEL QFDKAK+YN++AIK ++++R K+ + R+KL+ KPYRLKKRS
Sbjct: 1092 RDPESFLAHQKLALLLAASPDDQVRDGKQALQHAQQAAKLLPQQKSTNLALIAIAYAELKQFDKAKQYNRDAIKSQKHFRIKRLLEKREKLFVTRKPYRLKKRS 1195
BLAST of mRNA_M-pyrifera_M_contig128211.5672.1 vs. uniprot
Match: A0A517W3Y0_9PLAN (Tetratricopeptide repeat protein n=1 Tax=Gimesia aquarii TaxID=2527964 RepID=A0A517W3Y0_9PLAN) HSP 1 Score: 82.8 bits (203), Expect = 2.150e-15 Identity = 54/146 (36.99%), Postives = 89/146 (60.96%), Query Frame = 1
Query: 31 RDRARQDFDKAIELTPEVPEVWISRGEYLESTGQDQAAVKDFEEVVQRDPQNSFAPQAAAQLLASSPDDKVRDGKRALEYAQQAARLIPEQKSLNMALLAAAYAELGQFDKAKEYNQNAIKYEQNYRSKKSYQNRQKLYDAGKPYR 468
++ A Q FD+ ++L P++ V I+RG+ E+ AA+ D+++ ++ +P+ A L A+ DD++RDG +L++AQQA L+P + +N LAAAYAELGQFDKA E + A++ + K+ R L++ G+PYR
Sbjct: 1106 KEEAIQIFDEILKLKPDLFIVLINRGQMHEALKNYPAAIADYKKAIEIEPEYWIPHGNLAFLYAACEDDEIRDGTLSLQHAQQAFDLLPTKYWVNYGALAAAYAELGQFDKAIEMQRQAMELVPD-AQKREAARRLSLFNEGQPYR 1250
BLAST of mRNA_M-pyrifera_M_contig128211.5672.1 vs. uniprot
Match: A0A517VF58_9PLAN (Tetratricopeptide repeat protein n=1 Tax=Gimesia algae TaxID=2527971 RepID=A0A517VF58_9PLAN) HSP 1 Score: 80.5 bits (197), Expect = 1.370e-14 Identity = 52/139 (37.41%), Postives = 81/139 (58.27%), Query Frame = 1
Query: 52 FDKAIELTPEVPEVWISRGEYLESTGQDQAAVKDFEEVVQRDPQNSFAPQAAAQLLASSPDDKVRDGKRALEYAQQAARLIPEQKSLNMALLAAAYAELGQFDKAKEYNQNAIKYEQNYRSKKSYQNRQKLYDAGKPYR 468
F K ++L PE+ + I+R + E+ AA+ D+++ ++ DPQ A L A+S ++ RDG ++L+ AQ A+ +P Q +N A A AYAEL QFDKA E A++ N +KK Q R +L++ G+PYR
Sbjct: 1114 FGKILKLKPELVSILINRAQAYEAMHNYTAAIADYKQAIELDPQYWLPYNNLAFLYAASEQEEFRDGNKSLQNAQLASERLPTQYWVNYAAFAVAYAELKQFDKAIEMQTIALELAPN-EAKKIAQRRLRLFNEGEPYR 1251
BLAST of mRNA_M-pyrifera_M_contig128211.5672.1 vs. uniprot
Match: A0A7C1FLV4_9BACT (Tetratricopeptide repeat protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A7C1FLV4_9BACT) HSP 1 Score: 76.3 bits (186), Expect = 2.070e-14 Identity = 45/131 (34.35%), Postives = 79/131 (60.31%), Query Frame = 1
Query: 85 PEVWIS---RGEYLESTGQDQAAVKDFEEVVQRDPQNSFAPQAAAQLLASSPDDKVRDGKRALEYAQQAARLIPEQKSLNMALLAAAYAELGQFDKAKEYNQNAIKYEQNYRSKKSYQNRQKLYDAGKPYR 468
P+ W++ RG+ L +TG+ A+ D+E+ + P++ A +LA+SPD K+RDG+RALE A A L ++ ++ L AAYAELG F+ AK+++ ++ ++ K+ ++ + Y+A KP+R
Sbjct: 8 PDNWLALRGRGDLLLNTGKQAEAIADYEKAFKLRPKDPLLLNNLAWVLATSPDPKLRDGRRALELATTACELTEYKRPHILSTLGAAYAELGDFENAKKWSARGLELAEDEEQKEHFKKELECYNARKPFR 138
BLAST of mRNA_M-pyrifera_M_contig128211.5672.1 vs. uniprot
Match: A0A3A0DKW6_9BACT (Uncharacterized protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A3A0DKW6_9BACT) HSP 1 Score: 78.6 bits (192), Expect = 5.770e-14 Identity = 44/88 (50.00%), Postives = 60/88 (68.18%), Query Frame = 1
Query: 127 GQDQAAVKDFEEVVQRDPQNSFAPQAAAQLLASSPDDKVRDGKRALEYAQQAARLIPEQKSLNMALLAAAYAELGQFDKAKEYNQNAI 390
G +AAV DFEE ++ DP +S A A +LA+SPDD VRDGKRA+E A +A + Q+ ++ LAA YAE G FDKA+E++Q A+
Sbjct: 426 GDHRAAVADFEEAIKLDPLDSGALNNFAWVLATSPDDDVRDGKRAIELATKACEAVDYQQPHILSTLAAGYAETGDFDKAREWSQKAV 513
BLAST of mRNA_M-pyrifera_M_contig128211.5672.1 vs. uniprot
Match: A0A518AIB4_9BACT (Tetratricopeptide repeat protein n=1 Tax=Aeoliella mucimassa TaxID=2527972 RepID=A0A518AIB4_9BACT) HSP 1 Score: 78.2 bits (191), Expect = 7.970e-14 Identity = 47/118 (39.83%), Postives = 73/118 (61.86%), Query Frame = 1
Query: 37 RARQDFDKAIELTPEVPEVWISRGEYLESTGQDQAAVKDFEEVVQRDPQNSFAPQAAAQLLASSPDDKVRDGKRALEYAQQAARLIPEQKSLNMALLAAAYAELGQFDKAKEYNQNAI 390
+A + D+AI + PE ++ RG+ + G+ AVKD+ + ++ +P++S A LA+SP+D VRDGKRA+E A +A L Q ++ LAAAYAE G F+ AKE++Q A+
Sbjct: 444 KAIEALDRAIVINPEEALLYRYRGDSRLNIGEHVEAVKDYNKALELEPEDSGIMNNLAWTLATSPNDSVRDGKRAIELATKACELTNYQLPHILSTLAAAYAETGDFEAAKEWSQKAV 561
BLAST of mRNA_M-pyrifera_M_contig128211.5672.1 vs. uniprot
Match: A0A7C7V144_9PLAN (Tetratricopeptide repeat protein n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A7C7V144_9PLAN) HSP 1 Score: 75.1 bits (183), Expect = 9.190e-13 Identity = 50/139 (35.97%), Postives = 80/139 (57.55%), Query Frame = 1
Query: 52 FDKAIELTPEVPEVWISRGEYLESTGQDQAAVKDFEEVVQRDPQNSFAPQAAAQLLASSPDDKVRDGKRALEYAQQAARLIPEQKSLNMALLAAAYAELGQFDKAKEYNQNAIKYEQNYRSKKSYQNRQKLYDAGKPYR 468
+ K +E P+ R + L S G+ A+ D+E+ ++ +P + + +L++SP D++RDGKRALE A +A L +K+ ++ LAAAYAELGQFD A +++Q A++ R K S + Y GKP+R
Sbjct: 385 YTKVLEQQPDNAFALRGRADALLSMGKHAQAIADYEKFLKLNPDDPGVLNNLSWVLSTSPFDQLRDGKRALELALKACELTEYKKAHILSTLAAAYAELGQFDTAIQWSQKALEVASG-REKASLEKELATYKQGKPFR 522 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig128211.5672.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig128211.5672.1 >prot_M-pyrifera_M_contig128211.5672.1 ID=prot_M-pyrifera_M_contig128211.5672.1|Name=mRNA_M-pyrifera_M_contig128211.5672.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=162bp RGKLQALLKQRDRARQDFDKAIELTPEVPEVWISRGEYLESTGQDQAAVKback to top mRNA from alignment at M-pyrifera_M_contig128211:16..501- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig128211.5672.1 ID=mRNA_M-pyrifera_M_contig128211.5672.1|Name=mRNA_M-pyrifera_M_contig128211.5672.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=486bp|location=Sequence derived from alignment at M-pyrifera_M_contig128211:16..501- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig128211:16..501- >mRNA_M-pyrifera_M_contig128211.5672.1 ID=mRNA_M-pyrifera_M_contig128211.5672.1|Name=mRNA_M-pyrifera_M_contig128211.5672.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=972bp|location=Sequence derived from alignment at M-pyrifera_M_contig128211:16..501- (Macrocystis pyrifera P11B4 male)back to top |