mRNA_M-pyrifera_M_contig128206.5671.1 (mRNA) Macrocystis pyrifera P11B4 male
|
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig128206.5671.1 vs. uniprot
Match: A0A6I6AB10_9PLAN (Tetratricopeptide repeat protein n=6 Tax=Gimesia TaxID=1649453 RepID=A0A6I6AB10_9PLAN) HSP 1 Score: 233 bits (595), Expect = 3.530e-68 Identity = 129/167 (77.25%), Postives = 130/167 (77.84%), Query Frame = 1
Query: 1 FLDSDNRELREAAIRALVLNGHPRLFEVLSDALKSPEEEIRNVAFKELIKRKDNASEALAMEYVLQQMQQSLPTGDMLSFIDRMKDPRAIPLLFQHLEKDKLDAGLKVLLIKTLASIGDESVEDRFVKYYPGALQTEKLLILSTLQKLESPQFFELARQALDDSNHS 501
FLDSDNRELRE ELIKRKDNASEALAMEYVLQQMQ SLPTGDMLSFIDRMKDPRAIPLLFQHLEKDKLDAGLKV+LIKTLASIGDESVEDRFVKYYPGA QTEKLLILSTLQKLESPQFFELARQALDDSNHS
Sbjct: 478 FLDSDNRELREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXELIKRKDNASEALAMEYVLQQMQHSLPTGDMLSFIDRMKDPRAIPLLFQHLEKDKLDAGLKVMLIKTLASIGDESVEDRFVKYYPGAQQTEKLLILSTLQKLESPQFFELARQALDDSNHS 644
BLAST of mRNA_M-pyrifera_M_contig128206.5671.1 vs. uniprot
Match: A0A517R8K6_9PLAN (Lipoprotein NlpI n=1 Tax=Gimesia alba TaxID=2527973 RepID=A0A517R8K6_9PLAN) HSP 1 Score: 224 bits (571), Expect = 4.590e-65 Identity = 112/167 (67.07%), Postives = 144/167 (86.23%), Query Frame = 1
Query: 1 FLDSDNRELREAAIRALVLNGHPRLFEVLSDALKSPEEEIRNVAFKELIKRKDNASEALAMEYVLQQMQQSLPTGDMLSFIDRMKDPRAIPLLFQHLEKDKLDAGLKVLLIKTLASIGDESVEDRFVKYYPGALQTEKLLILSTLQKLESPQFFELARQALDDSNHS 501
FLDS + ELR+AAI+ALVLNGHP+LF+VL+DAL SP ++ VAF+ELIKRKD+ASEALA+ YVL+Q+QQ+ PT +ML FIDR+KDPRAIPLLFQHL+ KL+AGL++L +KTLASIGD++++++F+KYYP A TEK+LILS+LQ+LESP FF LA QAL+D S
Sbjct: 477 FLDSKDLELRKAAIKALVLNGHPQLFDVLTDALNSPYADLNQVAFQELIKRKDSASEALAINYVLEQLQQTPPTQEMLKFIDRLKDPRAIPLLFQHLQGSKLEAGLRILTLKTLASIGDQTIDEKFLKYYPQANSTEKVLILSSLQQLESPHFFNLAEQALNDKEQS 643
BLAST of mRNA_M-pyrifera_M_contig128206.5671.1 vs. uniprot
Match: A0A3D3R2Y7_9PLAN (Uncharacterized protein n=1 Tax=Gimesia maris TaxID=122 RepID=A0A3D3R2Y7_9PLAN) HSP 1 Score: 218 bits (554), Expect = 1.740e-63 Identity = 111/165 (67.27%), Postives = 140/165 (84.85%), Query Frame = 1
Query: 1 FLDSDNRELREAAIRALVLNGHPRLFEVLSDALKSPEEEIRNVAFKELIKRKDNASEALAMEYVLQQMQQSLPTGDMLSFIDRMKDPRAIPLLFQHLEKDKLDAGLKVLLIKTLASIGDESVEDRFVKYYPGALQTEKLLILSTLQKLESPQFFELARQALDDSN 495
F+ SD+ ELR+AAI+ALVLNGHPRLFE+L++AL+SP EIR VAF+ELI++KDN SEALA+ YVL Q++Q+ PT MLSF+DR+KDPRAIPLLF HLE KLDAGL+V +I TLASIGD++VE F+K YP A EK LI+++LQK++SPQ+FELA QAL+DSN
Sbjct: 129 FISSDDLELRKAAIKALVLNGHPRLFEILTNALQSPNPEIREVAFQELIQQKDNESEALALNYVLSQLEQTAPTRAMLSFLDRLKDPRAIPLLFHHLENLKLDAGLRVAIINTLASIGDQTVEAGFLKVYPQANSNEKQLIVTSLQKIDSPQYFELAEQALNDSN 293
BLAST of mRNA_M-pyrifera_M_contig128206.5671.1 vs. uniprot
Match: A6C882_9PLAN (Tetratricopeptide repeat domain containing protein n=5 Tax=Planctomycetaceae TaxID=126 RepID=A6C882_9PLAN) HSP 1 Score: 216 bits (549), Expect = 6.670e-62 Identity = 110/165 (66.67%), Postives = 138/165 (83.64%), Query Frame = 1
Query: 1 FLDSDNRELREAAIRALVLNGHPRLFEVLSDALKSPEEEIRNVAFKELIKRKDNASEALAMEYVLQQMQQSLPTGDMLSFIDRMKDPRAIPLLFQHLEKDKLDAGLKVLLIKTLASIGDESVEDRFVKYYPGALQTEKLLILSTLQKLESPQFFELARQALDDSN 495
F+ SD+ ELR+AAI+ALVLNGHPRLFE+L++AL+SP EIR VAF+ELI++KDN SE LA+ YVL Q++Q+ PT MLSF+DRMKDPRAIP LF HLE KLDAGL+V +I TLASIGD++VE F+K YP A EK LI+++LQK++SPQ+FELA QAL+DSN
Sbjct: 472 FISSDDLELRKAAIKALVLNGHPRLFEILTNALQSPNPEIREVAFQELIQQKDNESEVLALNYVLSQLEQTAPTRAMLSFLDRMKDPRAIPFLFHHLENLKLDAGLRVAIINTLASIGDQTVEAGFLKVYPQANSNEKQLIVTSLQKIDSPQYFELAEQALNDSN 636
BLAST of mRNA_M-pyrifera_M_contig128206.5671.1 vs. uniprot
Match: A0A518I5D1_9PLAN (Tetratricopeptide repeat protein n=1 Tax=Gimesia fumaroli TaxID=2527976 RepID=A0A518I5D1_9PLAN) HSP 1 Score: 213 bits (541), Expect = 6.320e-61 Identity = 105/167 (62.87%), Postives = 140/167 (83.83%), Query Frame = 1
Query: 1 FLDSDNRELREAAIRALVLNGHPRLFEVLSDALKSPEEEIRNVAFKELIKRKDNASEALAMEYVLQQMQQSLPTGDMLSFIDRMKDPRAIPLLFQHLEKDKLDAGLKVLLIKTLASIGDESVEDRFVKYYPGALQTEKLLILSTLQKLESPQFFELARQALDDSNHS 501
FLDS+N L EAAI+ALVLNGHP+L EVL+ L SP +R VAF+EL+KRKD+ASEALA++YVL Q+Q++ PT +ML+FIDR+KD RAIPLLF+HL+K KL+ GL+V++IKTLASIGD++V++ F+K+YP A EK+LILS LQK+ESP +++LA QAL+D N +
Sbjct: 479 FLDSENLGLHEAAIKALVLNGHPQLLEVLTQTLSSPHANLREVAFQELVKRKDSASEALAIDYVLMQLQKTPPTQEMLTFIDRLKDARAIPLLFRHLQKSKLETGLRVMVIKTLASIGDQTVDEEFLKFYPQANSNEKVLILSALQKMESPHYYKLAAQALNDKNQT 645
BLAST of mRNA_M-pyrifera_M_contig128206.5671.1 vs. uniprot
Match: A0A3C0AE66_9PLAN (Uncharacterized protein (Fragment) n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A3C0AE66_9PLAN) HSP 1 Score: 198 bits (504), Expect = 2.270e-56 Identity = 102/165 (61.82%), Postives = 129/165 (78.18%), Query Frame = 1
Query: 1 FLDSDNRELREAAIRALVLNGHPRLFEVLSDALKSPEEEIRNVAFKELIKRKDNASEALAMEYVLQQMQQSLPTGDMLSFIDRMKDPRAIPLLFQHLEKDKLDAGLKVLLIKTLASIGDESVEDRFVKYYPGALQTEKLLILSTLQKLESPQFFELARQALDDSN 495
F+ SDN ELR+AAI+ALVLNGHPRL E+L+ LKS EIR VAF+ELI++KDN SE LA+ YVL Q++Q+ PT ML+F+DR+KDPRAIPLLF HLE KLD+G ++ +I TLASIGD+++E F+K YP EK LILS LQK++SP +FEL QAL DS+
Sbjct: 474 FVSSDNLELRKAAIKALVLNGHPRLIEILTAGLKSSNPEIREVAFQELIQQKDNQSETLALNYVLSQLEQTPPTQTMLAFLDRLKDPRAIPLLFHHLENLKLDSGSRIAIINTLASIGDQTLETGFLKVYPQVNSQEKQLILSALQKVDSPHYFELVEQALHDSD 638
BLAST of mRNA_M-pyrifera_M_contig128206.5671.1 vs. uniprot
Match: A0A517ZZW6_9PLAN (Lipoprotein NlpI n=3 Tax=Gimesia panareensis TaxID=2527978 RepID=A0A517ZZW6_9PLAN) HSP 1 Score: 199 bits (506), Expect = 4.490e-56 Identity = 102/121 (84.30%), Postives = 113/121 (93.39%), Query Frame = 1
Query: 139 ELIKRKDNASEALAMEYVLQQMQQSLPTGDMLSFIDRMKDPRAIPLLFQHLEKDKLDAGLKVLLIKTLASIGDESVEDRFVKYYPGALQTEKLLILSTLQKLESPQFFELARQALDDSNHS 501
ELIKR+DNASE+LAM+YVLQQ+QQS PT +ML+FIDRMKDPRAIPLLFQHLEKDKLDAGLK+ LIKTLASIGDESVE RF+ YYP AL TEKLLILSTLQKLESPQFF+LA+QAL DSNH+
Sbjct: 524 ELIKRRDNASESLAMDYVLQQLQQSAPTTEMLTFIDRMKDPRAIPLLFQHLEKDKLDAGLKISLIKTLASIGDESVEARFLAYYPRALPTEKLLILSTLQKLESPQFFQLAKQALSDSNHT 644
BLAST of mRNA_M-pyrifera_M_contig128206.5671.1 vs. uniprot
Match: A0A2E2BZ88_9PLAN (Uncharacterized protein n=2 Tax=Planctomycetaceae TaxID=126 RepID=A0A2E2BZ88_9PLAN) HSP 1 Score: 198 bits (504), Expect = 8.390e-56 Identity = 102/165 (61.82%), Postives = 129/165 (78.18%), Query Frame = 1
Query: 1 FLDSDNRELREAAIRALVLNGHPRLFEVLSDALKSPEEEIRNVAFKELIKRKDNASEALAMEYVLQQMQQSLPTGDMLSFIDRMKDPRAIPLLFQHLEKDKLDAGLKVLLIKTLASIGDESVEDRFVKYYPGALQTEKLLILSTLQKLESPQFFELARQALDDSN 495
F+ SDN ELR+AAI+ALVLNGHPRL E+L+ LKS EIR VAF+ELI++KDN SE LA+ YVL Q++Q+ PT ML+F+DR+KDPRAIPLLF HLE KLD+G ++ +I TLASIGD+++E F+K YP EK LILS LQK++SP +FEL QAL DS+
Sbjct: 474 FVSSDNLELRKAAIKALVLNGHPRLIEILTAGLKSSNPEIREVAFQELIQQKDNQSETLALNYVLSQLEQTPPTQTMLAFLDRLKDPRAIPLLFHHLENLKLDSGSRIAIINTLASIGDQTLETGFLKVYPQVNSQEKQLILSALQKVDSPHYFELVEQALHDSD 638
BLAST of mRNA_M-pyrifera_M_contig128206.5671.1 vs. uniprot
Match: A0A517V6L3_9PLAN (Lipoprotein NlpI n=1 Tax=Gimesia algae TaxID=2527971 RepID=A0A517V6L3_9PLAN) HSP 1 Score: 160 bits (404), Expect = 2.480e-42 Identity = 86/165 (52.12%), Postives = 115/165 (69.70%), Query Frame = 1
Query: 1 FLDSDNRELREAAIRALVLNGHPRLFEVLSDALKSPEEEIRNVAFKELIKRKDNASEALAMEYVLQQMQQSLPTGDMLSFIDRMKDPRAIPLLFQHLEKDKLDAGLKVLLIKTLASIGDESVEDRFVKYYPGALQTEKLLILSTLQKLESPQFFELARQALDDSN 495
F+ SDN ELR+AAI+AL+LN LI++KDN SE LA+ YVL Q++Q+ PT ML+F+DR+KD RAIPLLF+HLE KLD+GL+V +IKTLASIGD++VE F+K YP A EKL+ILS+LQ+++SP ++EL QAL+DS+
Sbjct: 471 FISSDNLELRKAAIQALILNXXXXXXXXXXXXXXXXXXXXXXXXXXXLIQQKDNESETLALNYVLSQLKQTAPTQAMLTFLDRLKDQRAIPLLFRHLENPKLDSGLRVAVIKTLASIGDQTVESGFLKVYPQAKVNEKLVILSSLQEVDSPHYYELVEQALNDSD 635
BLAST of mRNA_M-pyrifera_M_contig128206.5671.1 vs. uniprot
Match: A0A517W493_9PLAN (TPR repeat-containing protein YrrB n=1 Tax=Gimesia aquarii TaxID=2527964 RepID=A0A517W493_9PLAN) HSP 1 Score: 139 bits (349), Expect = 6.130e-35 Identity = 70/121 (57.85%), Postives = 94/121 (77.69%), Query Frame = 1
Query: 139 ELIKRKDNASEALAMEYVLQQMQQSLPTGDMLSFIDRMKDPRAIPLLFQHLEKDKLDAGLKVLLIKTLASIGDESVEDRFVKYYPGALQTEKLLILSTLQKLESPQFFELARQALDDSNHS 501
ELIKRKD+ SE LAM YVL Q++ ++P+ ML+FI+R+KDPR IPLL QHL+ KLD G + ++K+LA+IGD +V+ F+K YP A EKLLIL++LQKL SPQ+F+LA +A+ DSN S
Sbjct: 523 ELIKRKDSKSETLAMNYVLSQLEHTVPSQQMLTFINRLKDPRTIPLLAQHLQDPKLDTGTRTAILKSLAAIGDLTVDVEFLKIYPQASAAEKLLILTSLQKLGSPQYFKLAEEAIQDSNLS 643 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig128206.5671.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 14
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig128206.5671.1 >prot_M-pyrifera_M_contig128206.5671.1 ID=prot_M-pyrifera_M_contig128206.5671.1|Name=mRNA_M-pyrifera_M_contig128206.5671.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=167bp FLDSDNRELREAAIRALVLNGHPRLFEVLSDALKSPEEEIRNVAFKELIKback to top mRNA from alignment at M-pyrifera_M_contig128206:2..502+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig128206.5671.1 ID=mRNA_M-pyrifera_M_contig128206.5671.1|Name=mRNA_M-pyrifera_M_contig128206.5671.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=501bp|location=Sequence derived from alignment at M-pyrifera_M_contig128206:2..502+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig128206:2..502+ >mRNA_M-pyrifera_M_contig128206.5671.1 ID=mRNA_M-pyrifera_M_contig128206.5671.1|Name=mRNA_M-pyrifera_M_contig128206.5671.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1002bp|location=Sequence derived from alignment at M-pyrifera_M_contig128206:2..502+ (Macrocystis pyrifera P11B4 male)back to top |