mRNA_M-pyrifera_M_contig128031.5643.1 (mRNA) Macrocystis pyrifera P11B4 male
|
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig128031.5643.1 vs. uniprot
Match: A0A517Q0J7_9PLAN (Transcriptional regulatory protein LiaR n=19 Tax=Planctomycetaceae TaxID=126 RepID=A0A517Q0J7_9PLAN) HSP 1 Score: 278 bits (712), Expect = 1.670e-93 Identity = 145/149 (97.32%), Postives = 148/149 (99.33%), Query Frame = 1
Query: 1 EEISSRLKNTKMIFLTGYLSDIFIELALRVNAVGYLLKGEPIESLIHAIKKASRGEYCFSQSVQERLVYDHKKNRYSIQSQSMLTSLTSRQIEVLRHLARGKSVKEVARSMHLSEKSIDSHKYRIMHKLGIHDRVELARYSIREGLTLP 447
EEISSRLKNTKMIFLTGYLSDIFIELALRVNAVGYLLKGEPIESLIHAIKKA+RGEYCFSQSVQERL+YD KKNRYSIQSQS+LTSLTSRQIEVLRHLARGKSVKEVARSMHLSEKSIDSHKYRIMHKLGIHDRVELARYSIREGLTLP
Sbjct: 73 EEISSRLKNTKMIFLTGYLSDIFIELALRVNAVGYLLKGEPIESLIHAIKKAARGEYCFSQSVQERLIYDQKKNRYSIQSQSILTSLTSRQIEVLRHLARGKSVKEVARSMHLSEKSIDSHKYRIMHKLGIHDRVELARYSIREGLTLP 221
BLAST of mRNA_M-pyrifera_M_contig128031.5643.1 vs. uniprot
Match: A0A517W3L2_9PLAN (Response regulator UvrY n=2 Tax=Gimesia aquarii TaxID=2527964 RepID=A0A517W3L2_9PLAN) HSP 1 Score: 273 bits (698), Expect = 2.260e-91 Identity = 141/149 (94.63%), Postives = 147/149 (98.66%), Query Frame = 1
Query: 1 EEISSRLKNTKMIFLTGYLSDIFIELALRVNAVGYLLKGEPIESLIHAIKKASRGEYCFSQSVQERLVYDHKKNRYSIQSQSMLTSLTSRQIEVLRHLARGKSVKEVARSMHLSEKSIDSHKYRIMHKLGIHDRVELARYSIREGLTLP 447
EEIS+RLKNTKMIFLTGYLSDIFI+LALRVNAVGYLLKGEPIESLIHAIKKA+RGEYCFSQ VQERL++DHKKN YSIQS+SMLTSLTSRQIEVLRHLARGKSVKEVARSMHLSEKSIDSHKYRIMHKLGIHDRVELARYSIREGLTLP
Sbjct: 73 EEISTRLKNTKMIFLTGYLSDIFIDLALRVNAVGYLLKGEPIESLIHAIKKAARGEYCFSQPVQERLIFDHKKNCYSIQSESMLTSLTSRQIEVLRHLARGKSVKEVARSMHLSEKSIDSHKYRIMHKLGIHDRVELARYSIREGLTLP 221
BLAST of mRNA_M-pyrifera_M_contig128031.5643.1 vs. uniprot
Match: A0A518IJH6_9PLAN (Transcriptional regulatory protein LiaR n=1 Tax=Gimesia fumaroli TaxID=2527976 RepID=A0A518IJH6_9PLAN) HSP 1 Score: 261 bits (666), Expect = 1.680e-86 Identity = 138/149 (92.62%), Postives = 142/149 (95.30%), Query Frame = 1
Query: 1 EEISSRLKNTKMIFLTGYLSDIFIELALRVNAVGYLLKGEPIESLIHAIKKASRGEYCFSQSVQERLVYDHKKNRYSIQSQSMLTSLTSRQIEVLRHLARGKSVKEVARSMHLSEKSIDSHKYRIMHKLGIHDRVELARYSIREGLTLP 447
EEISSRLKNTKMIFLTGYL+DIFIELALR NA GYLLKGEPIESLIHAIKKASRGEYCFSQSVQERLV+D KNRYSIQS+SMLTSLTSRQIEVLRHLA G SVKEVARSM LSEKSIDSHKYRIM+KLGIHDRVELARYSIREGLTLP
Sbjct: 73 EEISSRLKNTKMIFLTGYLTDIFIELALRANAKGYLLKGEPIESLIHAIKKASRGEYCFSQSVQERLVFDQDKNRYSIQSKSMLTSLTSRQIEVLRHLANGMSVKEVARSMFLSEKSIDSHKYRIMNKLGIHDRVELARYSIREGLTLP 221
BLAST of mRNA_M-pyrifera_M_contig128031.5643.1 vs. uniprot
Match: A0A3L7Q266_9BACT (DNA-binding response regulator n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A3L7Q266_9BACT) HSP 1 Score: 177 bits (450), Expect = 1.110e-53 Identity = 90/149 (60.40%), Postives = 116/149 (77.85%), Query Frame = 1
Query: 1 EEISSRLKNTKMIFLTGYLSDIFIELALRVNAVGYLLKGEPIESLIHAIKKASRGEYCFSQSVQERLVYDHKKNRYSIQSQSMLTSLTSRQIEVLRHLARGKSVKEVARSMHLSEKSIDSHKYRIMHKLGIHDRVELARYSIREGLTLP 447
EE+ SRL +++FLT Y++D+F++ LRVNA GYLLK E ++ A++ A RGE CFS V +RL Y RY ++S S L+SLT+RQ+EVLRHL RG+SVKEVAR+M LSE++I+SHKYRIM KLGIHDRVE ARY+IREGLT+P
Sbjct: 73 EEVLSRLPLLRLVFLTDYVTDVFLDQTLRVNATGYLLKTEHPSDIVKAVRSAMRGERCFSNDVLDRLDYHPASKRYMVRSTSYLSSLTNRQLEVLRHLTRGESVKEVARAMMLSERAIESHKYRIMQKLGIHDRVERARYAIREGLTVP 221
BLAST of mRNA_M-pyrifera_M_contig128031.5643.1 vs. uniprot
Match: A0A3L7P663_9BACT (DNA-binding response regulator n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A3L7P663_9BACT) HSP 1 Score: 177 bits (450), Expect = 1.140e-53 Identity = 90/149 (60.40%), Postives = 119/149 (79.87%), Query Frame = 1
Query: 1 EEISSRLKNTKMIFLTGYLSDIFIELALRVNAVGYLLKGEPIESLIHAIKKASRGEYCFSQSVQERLVYDHKKNRYSIQSQSMLTSLTSRQIEVLRHLARGKSVKEVARSMHLSEKSIDSHKYRIMHKLGIHDRVELARYSIREGLTLP 447
EE+ SRL T ++F T Y++D+F++ LRV+A GYLLK E ++ +++ ASRGE CFS V ER+ Y+ + RY ++S S L +LT+RQ+EVLRHLARG+SVKEVA+SM LSE++I+SHKYRIM KLGIHDRVELARY+IREGLT+P
Sbjct: 74 EEVLSRLTATNLVFFTDYVTDVFLDQTLRVHASGYLLKTERPPQIVQSLRAASRGEPCFSPQVLERMDYNPTQRRYLVRSNSYLLTLTNRQLEVLRHLARGESVKEVAKSMVLSERAIESHKYRIMQKLGIHDRVELARYAIREGLTVP 222
BLAST of mRNA_M-pyrifera_M_contig128031.5643.1 vs. uniprot
Match: A0A518CGR0_9PLAN (Oxygen regulatory protein NreC n=1 Tax=Polystyrenella longa TaxID=2528007 RepID=A0A518CGR0_9PLAN) HSP 1 Score: 170 bits (431), Expect = 9.400e-51 Identity = 90/149 (60.40%), Postives = 112/149 (75.17%), Query Frame = 1
Query: 1 EEISSRLKNTKMIFLTGYLSDIFIELALRVNAVGYLLKGEPIESLIHAIKKASRGEYCFSQSVQERLVYDHKKNRYSIQSQSMLTSLTSRQIEVLRHLARGKSVKEVARSMHLSEKSIDSHKYRIMHKLGIHDRVELARYSIREGLTLP 447
EE+ + T++ FLT L ++FIE ALR+ A GYLLK +P+ L+ AI K +GE FS+ +Q+RL Y+ + +Y+I S L LTSRQ EVLR LARGKSVKEVA+ MHLS KS+DSHKYRIMHKLGIHDRVELAR++IREGL LP
Sbjct: 77 EEMKRQELPTRICFLTNQLVNVFIEQALRLEAHGYLLKVDPLCKLLEAIPKIHQGEQVFSEEIQQRLRYNRQTKKYTIDSPHSLKKLTSRQFEVLRQLARGKSVKEVAKDMHLSTKSVDSHKYRIMHKLGIHDRVELARFAIREGLLLP 225
BLAST of mRNA_M-pyrifera_M_contig128031.5643.1 vs. uniprot
Match: A0A518GSX8_9PLAN (Response regulator UvrY n=5 Tax=Planctopirus TaxID=1649480 RepID=A0A518GSX8_9PLAN) HSP 1 Score: 169 bits (428), Expect = 1.440e-49 Identity = 84/149 (56.38%), Postives = 110/149 (73.83%), Query Frame = 1
Query: 1 EEISSRLKNTKMIFLTGYLSDIFIELALRVNAVGYLLKGEPIESLIHAIKKASRGEYCFSQSVQERLVYDHKKNRYSIQSQSMLTSLTSRQIEVLRHLARGKSVKEVARSMHLSEKSIDSHKYRIMHKLGIHDRVELARYSIREGLTLP 447
E + ++ ++I+L+GY SD+F+ AL+ GYLLKGEP+ ++ AI +A GE FS +++RL D R+S+ S + LT LT RQ+EVLRHLA G SVKE+A MHLS+KS+DSHKYRIMHKLGIHDRVELAR++IREGLT P
Sbjct: 136 ETLRTKAHGVRVIYLSGYASDVFLSKALKAGCYGYLLKGEPVSAIRQAILRAIDGEMSFSPEIRQRLAQDPVSRRFSLPSDTPLTGLTGRQLEVLRHLANGSSVKEIACLMHLSQKSVDSHKYRIMHKLGIHDRVELARFAIREGLTKP 284
BLAST of mRNA_M-pyrifera_M_contig128031.5643.1 vs. uniprot
Match: A0A7C4QTM0_9PLAN (Response regulator transcription factor n=1 Tax=Schlesneria paludicola TaxID=360056 RepID=A0A7C4QTM0_9PLAN) HSP 1 Score: 159 bits (403), Expect = 1.360e-46 Identity = 78/148 (52.70%), Postives = 110/148 (74.32%), Query Frame = 1
Query: 4 EISSRLKNTKMIFLTGYLSDIFIELALRVNAVGYLLKGEPIESLIHAIKKASRGEYCFSQSVQERLVYDHKKNRYSIQSQSMLTSLTSRQIEVLRHLARGKSVKEVARSMHLSEKSIDSHKYRIMHKLGIHDRVELARYSIREGLTLP 447
++ S K++FL+G+L+D+FI ALR+ A GYLLKG +++L AI + ++GE S VQERLV+D K RYS+ + L SLT+RQ+EV+RHL G ++K++A MH+S KS+DSH++RIM+KLG+HDRVEL R +IREGL LP
Sbjct: 72 DLRSECPQMKVLFLSGFLTDVFIAQALRLRANGYLLKGMSVQALTDAIARVAQGEMVCSPEVQERLVFDPKTGRYSVPNAGKLASLTARQLEVVRHLVGGDTIKDIAEKMHISSKSVDSHRHRIMNKLGVHDRVELTRLAIREGLILP 219
BLAST of mRNA_M-pyrifera_M_contig128031.5643.1 vs. uniprot
Match: A0A5C5X8F4_9PLAN (Oxygen regulatory protein NreC n=1 Tax=Thalassoglobus neptunius TaxID=1938619 RepID=A0A5C5X8F4_9PLAN) HSP 1 Score: 159 bits (402), Expect = 2.290e-46 Identity = 80/146 (54.79%), Postives = 109/146 (74.66%), Query Frame = 1
Query: 1 EEISSRLKNTKMIFLTGYLSDIFIELALRVNAVGYLLKGEPIESLIHAIKKASRGEYCFSQSVQERLVYDHKKNRYSIQSQSMLTSLTSRQIEVLRHLARGKSVKEVARSMHLSEKSIDSHKYRIMHKLGIHDRVELARYSIREGL 438
E I SRL T++ FLT Y++D+F++LAL++ GY LK +P +I+ G+ FS+ V ERL Y + Y ++SQS L++LT RQ++VLRHL RG+SVKEVA++M LSE++I+SHKYRIM KLGIHDRVELAR++IREGL
Sbjct: 77 EHIQSRLPATRLAFLTNYITDVFLDLALKIGVAGYALKTDPTNRIINGCLSIINGDQYFSERVLERLEYSPETGEYQVKSQSYLSTLTLRQLQVLRHLVRGESVKEVAKTMTLSERAIESHKYRIMQKLGIHDRVELARFAIREGL 222
BLAST of mRNA_M-pyrifera_M_contig128031.5643.1 vs. uniprot
Match: A0A1I3K4I2_9PLAN (DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains n=1 Tax=Planctomicrobium piriforme TaxID=1576369 RepID=A0A1I3K4I2_9PLAN) HSP 1 Score: 155 bits (392), Expect = 5.910e-45 Identity = 77/146 (52.74%), Postives = 111/146 (76.03%), Query Frame = 1
Query: 1 EEISSRLKNTKMIFLTGYLSDIFIELALRVNAVGYLLKGEPIESLIHAIKKASRGEYCFSQSVQERLVYDHKKNRYSIQSQSMLTSLTSRQIEVLRHLARGKSVKEVARSMHLSEKSIDSHKYRIMHKLGIHDRVELARYSIREGL 438
++I++RL TK +F T Y +DIFI++ALR+ G+LLK EP++ +I A++K S +S +V R+ +D + +Y +++QS + LT RQI+VLRHLARG+SVKEVA+ M LSE++I+SHKYRIM K+GIHDRV L R++IREGL
Sbjct: 69 DQIAARLPTTKTVFFTSYDTDIFIDVALRLGVAGFLLKNEPVDWVIEALRKISLDSNVYSDAVLNRVHFDRESKQYRVKTQSFFSGLTLRQIQVLRHLARGESVKEVAKCMMLSERAIESHKYRIMQKMGIHDRVVLTRFAIREGL 214 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig128031.5643.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig128031.5643.1 >prot_M-pyrifera_M_contig128031.5643.1 ID=prot_M-pyrifera_M_contig128031.5643.1|Name=mRNA_M-pyrifera_M_contig128031.5643.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=150bp EEISSRLKNTKMIFLTGYLSDIFIELALRVNAVGYLLKGEPIESLIHAIKback to top mRNA from alignment at M-pyrifera_M_contig128031:2..451+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig128031.5643.1 ID=mRNA_M-pyrifera_M_contig128031.5643.1|Name=mRNA_M-pyrifera_M_contig128031.5643.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=450bp|location=Sequence derived from alignment at M-pyrifera_M_contig128031:2..451+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig128031:2..451+ >mRNA_M-pyrifera_M_contig128031.5643.1 ID=mRNA_M-pyrifera_M_contig128031.5643.1|Name=mRNA_M-pyrifera_M_contig128031.5643.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=900bp|location=Sequence derived from alignment at M-pyrifera_M_contig128031:2..451+ (Macrocystis pyrifera P11B4 male)back to top |