mRNA_M-pyrifera_M_contig128026.5642.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig128026.5642.1 vs. uniprot
Match: A0A2D5WBD2_9BACT (NADH-quinone oxidoreductase subunit N n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A2D5WBD2_9BACT) HSP 1 Score: 182 bits (461), Expect = 3.730e-52 Identity = 94/163 (57.67%), Postives = 118/163 (72.39%), Query Frame = 1
Query: 10 SPIFLAGAGLLMAGLFFKVSVFPFHLWVPDVYQGAPTPLTTLMATGTKAAAFGFMIPLAFILPVEATGTIAAIALLTMAAGNLAALVQTNLKRMMAYSGIAHAGTILLVIVAYLASNH-DGAVQEDAFHAALFYLGAYLFTSTGTFGLIAMLEREGEEKLTLA 495
+P+ AG L+ A LFFK SVFPFHLW PDVYQG+PTP+T LMATGTKAAAF F++ AF+LP A G +A AL+TMA GNL ALVQTN+KRM+AYSG+AHAGT+LL + L + GA A LFY+ AY T G FGL+++LE +G+E+L L+
Sbjct: 210 TPLAAAGVALIAASLFFKTSVFPFHLWAPDVYQGSPTPVTILMATGTKAAAFAFLLHAAFLLPAAAAGVVAVTALVTMALGNLGALVQTNVKRMLAYSGVAHAGTVLLALAGALRGDPLQGADGGAPMQAVLFYMAAYAVTGAGAFGLLSLLEGDGDERLELS 372
BLAST of mRNA_M-pyrifera_M_contig128026.5642.1 vs. uniprot
Match: A0A2E5X7Y4_9BACT (NADH-quinone oxidoreductase subunit N n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A2E5X7Y4_9BACT) HSP 1 Score: 178 bits (451), Expect = 1.170e-50 Identity = 91/163 (55.83%), Postives = 119/163 (73.01%), Query Frame = 1
Query: 10 SPIFLAGAGLLMAGLFFKVSVFPFHLWVPDVYQGAPTPLTTLMATGTKAAAFGFMIPLAFILPVEATGTIAAIALLTMAAGNLAALVQTNLKRMMAYSGIAHAGTILLVIVAYLASNHDGAVQEDA-FHAALFYLGAYLFTSTGTFGLIAMLEREGEEKLTLA 495
+P+ AG L+ A LFFK S+FPFHLW PDVYQG+P P+T LMATGTKAAAF F++ AF+LP A G +A +AL+TMA GNL ALVQTN+KRM+AYSG+AHAGT+LL + LA + + A A LFY+ AY + G FGL+++LE +G+E+L L+
Sbjct: 213 TPLAAAGVALIAASLFFKTSIFPFHLWAPDVYQGSPAPVTILMATGTKAAAFAFLLHAAFLLPPAAAGVVALLALVTMALGNLGALVQTNVKRMLAYSGVAHAGTVLLALAGALAGDPLNSAGAGAPVQAVLFYMAAYAVSGAGAFGLLSILEGDGDERLELS 375
BLAST of mRNA_M-pyrifera_M_contig128026.5642.1 vs. uniprot
Match: A0A7C7YVX3_9BACT (NADH-quinone oxidoreductase subunit N n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A7C7YVX3_9BACT) HSP 1 Score: 176 bits (445), Expect = 7.000e-50 Identity = 91/161 (56.52%), Postives = 118/161 (73.29%), Query Frame = 1
Query: 10 SPIFLAGAGLLMAGLFFKVSVFPFHLWVPDVYQGAPTPLTTLMATGTKAAAFGFMIPLAFILPVEATGTIAAIALLTMAAGNLAALVQTNLKRMMAYSGIAHAGTILLVIVAYLASNHDGAVQEDAFHAALFYLGAYLFTSTGTFGLIAMLEREGEEKLTL 492
+P+ L G L+++ LFFKVSVFPFHLWVPDVYQG+PTP+TT MATGTKAA F F+ +AF++P A A+A+ TMA GNLAALVQT+LKR+ A+S +AHAGT+LL + A A + V AAL+Y+GAY+FT+ G FGL+A++E E E L L
Sbjct: 204 APLALMGGALVISSLFFKVSVFPFHLWVPDVYQGSPTPVTTFMATGTKAAGFAFLFQVAFLMPAGAAALTGALAVATMAVGNLAALVQTDLKRLFAFSAVAHAGTLLLGVAALAAGDP---VASGPLDAALYYMGAYIFTAGGAFGLVALMESEDERFLKL 361
BLAST of mRNA_M-pyrifera_M_contig128026.5642.1 vs. uniprot
Match: A0A7C1WV42_9BACT (NADH-quinone oxidoreductase subunit N n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A7C1WV42_9BACT) HSP 1 Score: 175 bits (444), Expect = 1.080e-49 Identity = 95/158 (60.13%), Postives = 119/158 (75.32%), Query Frame = 1
Query: 22 LAGAGLLMAGLFFKVSVFPFHLWVPDVYQGAPTPLTTLMATGTKAAAFGFMI-PLAFILPVEATGTIAAIALLTMAAGNLAALVQTNLKRMMAYSGIAHAGTILLVIVAYLASNHDGAVQEDAFHAALFYLGAYLFTSTGTFGLIAMLEREGEEKLTL 492
LAG L+ +G+FFK S+FPFH+WVPDVYQG+PTP+T LMATGTKAA FGF++ L +LP A IA +A++TM GN ALVQ+N+KRM+AYSG+AHAGT+LLV+ +LA GA A AALFYL AYLFT TG FGL+A+LE +GE +L
Sbjct: 212 LAGIALVTSGVFFKASIFPFHMWVPDVYQGSPTPVTALMATGTKAAIFGFLVVQLMPLLPPSAAPMIAVLAIVTMFLGNFGALVQSNVKRMLAYSGVAHAGTLLLVVPGFLA----GADPAAASRAALFYLVAYLFTGTGAFGLLALLEADGERFTSL 365
BLAST of mRNA_M-pyrifera_M_contig128026.5642.1 vs. uniprot
Match: A0A2D5B265_9BACT (NADH-quinone oxidoreductase subunit N n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A2D5B265_9BACT) HSP 1 Score: 174 bits (440), Expect = 4.110e-49 Identity = 97/159 (61.01%), Postives = 118/159 (74.21%), Query Frame = 1
Query: 1 VAYSPIFLAGAGLLMAGLFFKVSVFPFHLWVPDVYQGAPTPLTTLMATGTKAAAFGFMIP-LAFILPVEATGTIAAIALLTMAAGNLAALVQTNLKRMMAYSGIAHAGTILLVIVAYLASNHDGAVQEDAFHAALFYLGAYLFTSTGTFGLIAMLEREG 474
VA S + G L+ A LFFKVSVFPFHLWVPDVYQG+PTP+T LMATG KA AF F+I L +LP A T+A IAL+TMA GNL ALVQ +LKRM+AYSGIAHAGT+LLV+ A +A ++ AA +Y+GAYLFT+TG FGLI++LE +G
Sbjct: 204 VAESNLATTGVALVAASLFFKVSVFPFHLWVPDVYQGSPTPITALMATGAKAGAFSFLIVRLTPLLPPAAAQTVAVIALVTMALGNLGALVQRDLKRMLAYSGIAHAGTLLLVVAAGVALGDTSGGEQ----AAWYYMGAYLFTATGAFGLISLLEADG 358
BLAST of mRNA_M-pyrifera_M_contig128026.5642.1 vs. uniprot
Match: A0A800KJQ8_9BACT (NADH-quinone oxidoreductase subunit N n=3 Tax=cellular organisms TaxID=131567 RepID=A0A800KJQ8_9BACT) HSP 1 Score: 172 bits (437), Expect = 1.070e-48 Identity = 91/157 (57.96%), Postives = 118/157 (75.16%), Query Frame = 1
Query: 7 YSPIFLAGAGLLMAGLFFKVSVFPFHLWVPDVYQGAPTPLTTLMATGTKAAAFGFMIPLAFILPVEATGTIAAIALLTMAAGNLAALVQTNLKRMMAYSGIAHAGTILLVIVAYLASNHDGAVQEDAFHAALFYLGAYLFTSTGTFGLIAMLEREGE 477
+SP+ G ++ L FK+SV+PFHLWVPDVYQGAPTP+T LMATGTKAAA F + + +LP + G IA +A+LTMAAGNL ALVQ+NLKR++AYSG+AHAGT+LL++ A AS G + +A AALFY+ AY+ T+ G FGL+A LE +GE
Sbjct: 205 FSPMAQVGMAFVLGSLLFKLSVWPFHLWVPDVYQGAPTPVTILMATGTKAAALAFTLRITGLLPESSAGLIALLAVLTMAAGNLGALVQSNLKRLLAYSGVAHAGTLLLLVAAQRAS---GELSYEATSAALFYMAAYVATAGGAFGLLAWLEADGE 358
BLAST of mRNA_M-pyrifera_M_contig128026.5642.1 vs. uniprot
Match: A0A7Y4WHZ6_9BACT (NADH-quinone oxidoreductase subunit N n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A7Y4WHZ6_9BACT) HSP 1 Score: 171 bits (433), Expect = 4.650e-48 Identity = 91/156 (58.33%), Postives = 116/156 (74.36%), Query Frame = 1
Query: 10 SPIFLAGAGLLMAGLFFKVSVFPFHLWVPDVYQGAPTPLTTLMATGTKAAAFGFM-IPLAFILPVEATGTIAAIALLTMAAGNLAALVQTNLKRMMAYSGIAHAGTILLVIVAYLASNHDGAVQEDAFHAALFYLGAYLFTSTGTFGLIAMLEREG 474
+P+ LAG L+ A LFFKV+VFPF LW PDVYQG+PTP+T LMATGTKAAAFGF+ + L ILP T+A +AL+TM GNL ALVQT+LKRM+AYS +AHAGT+LL++ A + + + A AAL+YLG YLFT+ G FGL+ +LE +G
Sbjct: 210 APLALAGLALVAASLFFKVAVFPFQLWAPDVYQGSPTPVTALMATGTKAAAFGFLLVQLTPILPATGRATVAVLALVTMLLGNLGALVQTDLKRMLAYSSVAHAGTLLLLVAAGMGAPDE----HGALGAALYYLGGYLFTAMGAFGLLGLLEADG 361
BLAST of mRNA_M-pyrifera_M_contig128026.5642.1 vs. uniprot
Match: A0A800N2Q3_9BACT (NADH-quinone oxidoreductase subunit N n=2 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A800N2Q3_9BACT) HSP 1 Score: 158 bits (399), Expect = 4.400e-43 Identity = 88/165 (53.33%), Postives = 114/165 (69.09%), Query Frame = 1
Query: 10 SPIFLAGAGLLMAGLFFKVSVFPFHLWVPDVYQGAPTPLTTLMATGTKAAAFGFMIPLAFILPVEATGTIAAIALLTMAAGNLAALVQTNLKRMMAYSGIAHAGTILLVIVAYLAS---NHDGAVQEDAFHAALFYLGAYLFTSTGTFGLIAMLEREGEEKLTLA 495
+P+ G L++A L FK V PFHLWVPDVYQG+PTP+TTLMATGTKAAAF F++ LA ILP EA + I + T+A GNL ALVQT+LKR++A+SGIAHAG +LLVI A +++ N + A A L YL AY F + G GL+A +E +GE+ L+
Sbjct: 205 TPLGSVGMALILASLLFKAGVAPFHLWVPDVYQGSPTPITTLMATGTKAAAFAFLLRLAPILPSEAGLPLGIIGVATLALGNLGALVQTDLKRLLAWSGIAHAGLLLLVISAAVSAAGTNQQAEILNAATSALLLYLLAYAFAAGGALGLVAWMEADGEDHTQLS 369
BLAST of mRNA_M-pyrifera_M_contig128026.5642.1 vs. uniprot
Match: A0A522BHJ7_9BACT (NADH-quinone oxidoreductase subunit N n=1 Tax=bacterium TaxID=1869227 RepID=A0A522BHJ7_9BACT) HSP 1 Score: 139 bits (351), Expect = 3.810e-36 Identity = 86/168 (51.19%), Postives = 110/168 (65.48%), Query Frame = 1
Query: 1 VAYSPIFLAGAGLLMAGLFFKVSVFPFHLWVPDVYQGAPTPLTTLMATGTKAAAFG--FMIPL-AFILPVEA-TGTIAAIALLTMAAGNLAALVQTNLKRMMAYSGIAHAGTILLVIVAYLASNHDGAVQEDAFHAALFYLGAYLFTSTGTFGLIAMLEREGEEKLTL 492
+ +SP+ LAG L+ G FKV+ FPFH+W PDVYQGAPTP+T MATG KAAAF F I L AF VE+ +G + IA+LTM GNLAALVQ ++KRM+AYS IAHAG +L+ +V A DA LFYL +Y F + G F + ML R+G+++ TL
Sbjct: 200 MTHSPMALAGIALIAGGFAFKVAAFPFHVWTPDVYQGAPTPVTAFMATGVKAAAFAAFFRIFLVAFPASVESWSGALWIIAVLTMTMGNLAALVQKDIKRMLAYSSIAHAGYLLVAMVTATA---------DAGTGLLFYLFSYAFMNIGAFACVIMLGRKGDQRTTL 358
BLAST of mRNA_M-pyrifera_M_contig128026.5642.1 vs. uniprot
Match: A0A533SNJ7_9BACT (NADH-quinone oxidoreductase subunit N (Fragment) n=1 Tax=bacterium TaxID=1869227 RepID=A0A533SNJ7_9BACT) HSP 1 Score: 137 bits (346), Expect = 1.480e-35 Identity = 81/168 (48.21%), Postives = 104/168 (61.90%), Query Frame = 1
Query: 1 VAYSPIFLAGAGLLMAGLFFKVSVFPFHLWVPDVYQGAPTPLTTLMATGTKAAAFG-FMIPLAFILPVEA---TGTIAAIALLTMAAGNLAALVQTNLKRMMAYSGIAHAGTILLVIVAYLASNHDGAVQEDAFHAALFYLGAYLFTSTGTFGLIAMLEREGEEKLTL 492
+ SP+ LAG GL+ G FKV+ FPFH+W PDVYQGAPTP+T MATG KAAAF F+ P+ A TG + IA+LTM GNL+ALVQ ++KRM+AYS IAHAG +L+ +V A G LFYL +Y F + G F + ML +G+E+ L
Sbjct: 200 ITSSPMALAGIGLIAGGFAFKVAAFPFHVWTPDVYQGAPTPVTAFMATGVKAAAFAAFLKVFMTAFPIAAPNWTGALWVIAILTMTVGNLSALVQKDVKRMLAYSSIAHAGYLLVAMVTATAEAGTG---------MLFYLISYAFMNIGAFACVIMLGEKGKERTNL 358 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig128026.5642.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig128026.5642.1 >prot_M-pyrifera_M_contig128026.5642.1 ID=prot_M-pyrifera_M_contig128026.5642.1|Name=mRNA_M-pyrifera_M_contig128026.5642.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=165bp VAYSPIFLAGAGLLMAGLFFKVSVFPFHLWVPDVYQGAPTPLTTLMATGTback to top mRNA from alignment at M-pyrifera_M_contig128026:4..498- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig128026.5642.1 ID=mRNA_M-pyrifera_M_contig128026.5642.1|Name=mRNA_M-pyrifera_M_contig128026.5642.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=495bp|location=Sequence derived from alignment at M-pyrifera_M_contig128026:4..498- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig128026:4..498- >mRNA_M-pyrifera_M_contig128026.5642.1 ID=mRNA_M-pyrifera_M_contig128026.5642.1|Name=mRNA_M-pyrifera_M_contig128026.5642.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=990bp|location=Sequence derived from alignment at M-pyrifera_M_contig128026:4..498- (Macrocystis pyrifera P11B4 male)back to top |