mRNA_M-pyrifera_M_contig127724.5584.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig127724.5584.1 vs. uniprot
Match: L8H8E1_ACACA (ATPdependent DNA ligase domain containing protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8H8E1_ACACA) HSP 1 Score: 154 bits (389), Expect = 4.890e-41 Identity = 66/126 (52.38%), Postives = 93/126 (73.81%), Query Frame = 1
Query: 1 SVDPVGWWMSEKLDGVRAYWNGKRLLSRNGNSFAAPKWFLDGLPEDMHLDGELWCGRGKFQLAVTVTRTEGSD-EWGKVAYHVFDAPQVDEAFEDRVKATKRHFKANPCDHVKIVSQAKCKGKDDI 375
SVDP GWW+SEKLDGVRAYWNGK +SR GN+F AP WF + LP +M LDGEL+ GRGKFQ+ V+V +++GSD W + + +FDAP +++ FE+R++A F A+P D+ K++ +CKG+ +
Sbjct: 616 SVDPTGWWLSEKLDGVRAYWNGKAFISRLGNAFYAPDWFCEALPTNMPLDGELFGGRGKFQITVSVAKSQGSDVRWKNLKFQIFDAPGLNKTFEERLQAINDWFSAHPTDYAKVLKMTRCKGQSHL 741
BLAST of mRNA_M-pyrifera_M_contig127724.5584.1 vs. uniprot
Match: R7T7U7_CAPTE (Uncharacterized protein n=1 Tax=Capitella teleta TaxID=283909 RepID=R7T7U7_CAPTE) HSP 1 Score: 151 bits (381), Expect = 8.660e-41 Identity = 67/126 (53.17%), Postives = 87/126 (69.05%), Query Frame = 1
Query: 4 VDPVGWWMSEKLDGVRAYWNGKRLLSRNGNSFAAPKWFLDGLPEDMHLDGELWCGRGKFQLAVTVTRTEGSDEWGKVAYHVFDAPQVD-EAFEDRVKATKRHFKANPCDHVKIVSQAKCKGKDDIK 378
++P GWW+SEKLDGVRAYW+GK SR GN F AP WFL GLP DMHLDGEL+ GRGKFQ V++ +T D W ++ Y VFDAP + + FE R +A K +F+ N +V +V + CKG + +K
Sbjct: 285 LNPKGWWLSEKLDGVRAYWDGKTFYSRLGNEFIAPPWFLKGLPADMHLDGELFGGRGKFQTTVSIVKTPEDDRWAQLTYQVFDAPSISPQPFEKRCEAIKEYFEKNRAKYVVVVEEEVCKGSEHLK 410
BLAST of mRNA_M-pyrifera_M_contig127724.5584.1 vs. uniprot
Match: UPI0001CBB244 (uncharacterized protein LOC100366927 isoform X1 n=2 Tax=Saccoglossus kowalevskii TaxID=10224 RepID=UPI0001CBB244) HSP 1 Score: 151 bits (381), Expect = 9.220e-41 Identity = 69/126 (54.76%), Postives = 89/126 (70.63%), Query Frame = 1
Query: 1 SVDPVGWWMSEKLDGVRAYWNGKRLLSRNGNSFAAPKWFLDGLPEDMHLDGELWCGRGKFQLAVTVTRTEGSDE-WGKVAYHVFDAPQVDEAFEDRVKATKRHFKANPCDHVKIVSQAKCKGKDDI 375
SVDP GWWMSEKLDGVRA+W+G++ SR GN+F AP WF P DM LDGEL+ GRG FQ V++ ++ +DE W KV +HVFDAP V + FE R++A + +F AN VK+V Q KCK K+ +
Sbjct: 280 SVDPKGWWMSEKLDGVRAWWDGRKFRSRLGNTFYAPGWFTKDYPTDMELDGELFGGRGMFQATVSIVKSSDTDERWKKVVFHVFDAPNVKDTFEKRMEALEDYFSANTVTTVKVVDQTKCKNKEHL 405
BLAST of mRNA_M-pyrifera_M_contig127724.5584.1 vs. uniprot
Match: UPI001E1DFDD1 (uncharacterized protein LOC123548346 n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1DFDD1) HSP 1 Score: 150 bits (378), Expect = 2.120e-40 Identity = 68/125 (54.40%), Postives = 83/125 (66.40%), Query Frame = 1
Query: 4 VDPVGWWMSEKLDGVRAYWNGKRLLSRNGNSFAAPKWFLDGLPEDMHLDGELWCGRGKFQLAVTVTRTEGSDEWGKVAYHVFDAPQVD-EAFEDRVKATKRHFKANPCDHVKIVSQAKCKGKDDI 375
+PV WWMSEKLDGVRAYWNG+ SR GN+F AP WF LP+DMHLDGEL+ GR KFQ V++ +T W K+ YHVFDAP ++ E FE R+KA +F D+ K+V KC G D I
Sbjct: 272 TNPVNWWMSEKLDGVRAYWNGRCFYSRLGNAFFAPSWFTKDLPKDMHLDGELFGGRKKFQSTVSIVKTPEHQHWNKIVYHVFDAPHLEKEPFEKRMKAINDYFDTKKTDYAKVVKHEKCTGHDQI 396
BLAST of mRNA_M-pyrifera_M_contig127724.5584.1 vs. uniprot
Match: A0A139AMI7_GONPJ (DNA ligase/mRNA capping enzyme n=1 Tax=Gonapodya prolifera (strain JEL478) TaxID=1344416 RepID=A0A139AMI7_GONPJ) HSP 1 Score: 147 bits (372), Expect = 6.120e-40 Identity = 70/128 (54.69%), Postives = 86/128 (67.19%), Query Frame = 1
Query: 1 SVDPVGWWMSEKLDGVRAYWNGKR--LLSRNGNSFAAPKWFLDGLPEDMHLDGELWCGRGKFQLAVTVTRTEGSDEWGKVAYHVFDAPQV-DEAFEDRVKATKRHFKANPCDHVKIVSQAKCKGKDDI 375
+VDP GWW+SEKLDGVRAYW+ KR SR GN F P WF + LP +M LDGEL+ GRGKF V+V +T S W KV + VFDAP + DE FE R+K + HF +P DHVK+V Q KC G+ +
Sbjct: 204 NVDPTGWWISEKLDGVRAYWDPKRRQFYSRLGNPFTPPDWFTETLPGNMSLDGELFVGRGKFIETVSVVKTMNSKHWAKVTFQVFDAPSIGDEPFESRLKVIEDHFAKSPIDHVKVVKQTKCTGQAHV 331
BLAST of mRNA_M-pyrifera_M_contig127724.5584.1 vs. uniprot
Match: V3ZA01_LOTGI (DNA_LIGASE_A3 domain-containing protein n=1 Tax=Lottia gigantea TaxID=225164 RepID=V3ZA01_LOTGI) HSP 1 Score: 147 bits (371), Expect = 1.630e-39 Identity = 66/124 (53.23%), Postives = 84/124 (67.74%), Query Frame = 1
Query: 7 DPVGWWMSEKLDGVRAYWNGKRLLSRNGNSFAAPKWFLDGLPEDMHLDGELWCGRGKFQLAVTVTRTEGSDEWGKVAYHVFDAPQVDEA-FEDRVKATKRHFKANPCDHVKIVSQAKCKGKDDI 375
DP GWWMSEKLDGVRA+WNG SR GN F AP+WF LP+D+HLDGEL+ GRGKFQ V + + + D+W KV YHVFDAP +++ FE+R + + F A + + Q KCKGK+ I
Sbjct: 252 DPTGWWMSEKLDGVRAFWNGNCFYSRLGNCFIAPQWFTKDLPKDLHLDGELFGGRGKFQSTVKIVKNQECDDWKKVKYHVFDAPNLEKKPFEERYSSLREFFDAESPQYAVLCEQTKCKGKEHI 375
BLAST of mRNA_M-pyrifera_M_contig127724.5584.1 vs. uniprot
Match: A0A7S3Z8R8_9EUKA (Hypothetical protein n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3Z8R8_9EUKA) HSP 1 Score: 141 bits (356), Expect = 5.720e-39 Identity = 60/121 (49.59%), Postives = 87/121 (71.90%), Query Frame = 1
Query: 16 GWWMSEKLDGVRAYWNGKRLLSRNGNSFAAPKWFLDGLPEDMHLDGELWCGRGKFQLAVTVTRTEG-SDEWGKVAYHVFDAPQVDEAFEDRVKATKRHFKANPCDHVKIVSQAKCKGKDDI 375
GWWMSEKLDGVRAYW+G RL+SRNGN+F AP WFL+GLP+D+HLDGE++ GR KFQ +++ R+ S+ W + Y +FD P +D FEDR++ ++ + +++++V C GKD +
Sbjct: 53 GWWMSEKLDGVRAYWDGTRLMSRNGNTFHAPDWFLEGLPKDLHLDGEMFGGRQKFQETISIVRSGSKSERWKSLTYELFDVPSLDRPFEDRLERIRKLVEMKKNEYLRVVEHKLCTGKDHL 173
BLAST of mRNA_M-pyrifera_M_contig127724.5584.1 vs. uniprot
Match: A0A2C9L857_BIOGL (DNA_LIGASE_A3 domain-containing protein n=1 Tax=Biomphalaria glabrata TaxID=6526 RepID=A0A2C9L857_BIOGL) HSP 1 Score: 142 bits (357), Expect = 6.440e-39 Identity = 64/124 (51.61%), Postives = 85/124 (68.55%), Query Frame = 1
Query: 7 DPVGWWMSEKLDGVRAYWNGKRLLSRNGNSFAAPKWFLDGLPEDMHLDGELWCGRGKFQLAVTVTRTEGSDEWGKVAYHVFDAPQVD-EAFEDRVKATKRHFKANPCDHVKIVSQAKCKGKDDI 375
+PVGWW+SEKLDGVRA+WNG+ SR GN+F AP WF LP+DMHLDGEL+ GRG+FQ V++ +T S +W + YHVFD+P + E FE R+ K +F+ +H V Q KCK K+ +
Sbjct: 63 NPVGWWISEKLDGVRAFWNGRCFYSRLGNAFYAPAWFTKDLPKDMHLDGELFGGRGEFQSTVSIVKTAESPKWKDIKYHVFDSPHMGKEVFEKRMHLIKEYFEDVQPEHAVFVEQTKCKSKEHL 186
BLAST of mRNA_M-pyrifera_M_contig127724.5584.1 vs. uniprot
Match: A0A210QMF7_MIZYE (DNA ligase n=2 Tax=Pectinidae TaxID=6566 RepID=A0A210QMF7_MIZYE) HSP 1 Score: 145 bits (366), Expect = 6.630e-39 Identity = 70/131 (53.44%), Postives = 88/131 (67.18%), Query Frame = 1
Query: 1 SVDPVGWWMSEKLDGVRAYWNGKRLLSRNGNSFAAPKWFLDGLPEDMHLDGELWCGRGKFQLAVTVTRTEGSDEWGKVAYHVFDAPQVD-EAFEDRVKATKRHFKANPCDHVKIVSQAKCKGK----DDIK 378
S +PVGWW+SEKLDGVRA+WNGK SR GN F APKWF LP+DMHLDGEL+ GR KFQ V++ +T D W K+ Y VFDAP ++ E FE R +A + +F N + ++V Q KC K DD+K
Sbjct: 231 SPNPVGWWVSEKLDGVRAFWNGKCFYSRLGNPFYAPKWFTKDLPKDMHLDGELFGGRKKFQSTVSIVKTPECDNWKKIKYSVFDAPYMEKETFEKRQEALREYFDENTPQYAELVKQTKCTSKQQLEDDLK 361
BLAST of mRNA_M-pyrifera_M_contig127724.5584.1 vs. uniprot
Match: UPI000359A797 (uncharacterized protein LOC101848532 n=1 Tax=Aplysia californica TaxID=6500 RepID=UPI000359A797) HSP 1 Score: 142 bits (359), Expect = 1.560e-37 Identity = 64/125 (51.20%), Postives = 86/125 (68.80%), Query Frame = 1
Query: 4 VDPVGWWMSEKLDGVRAYWNGKRLLSRNGNSFAAPKWFLDGLPEDMHLDGELWCGRGKFQLAVTVTRTEGSDEWGKVAYHVFDAPQVD-EAFEDRVKATKRHFKANPCDHVKIVSQAKCKGKDDI 375
+PVGWW+SEKLDGVRA+WNG+ SR GN+F AP+WF LP DM LDGEL+ GRG+FQ V++ +T S +W + YHVFD+P + E FE+R+ A K +F+ ++ V Q KCK KD +
Sbjct: 300 TNPVGWWISEKLDGVRAFWNGRCFYSRLGNAFYAPEWFTKDLPTDMTLDGELFGGRGQFQSTVSIVKTAESPKWKDIKYHVFDSPDMGKETFENRMNAIKEYFEEKQPEYAVFVEQVKCKSKDQL 424 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig127724.5584.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig127724.5584.1 >prot_M-pyrifera_M_contig127724.5584.1 ID=prot_M-pyrifera_M_contig127724.5584.1|Name=mRNA_M-pyrifera_M_contig127724.5584.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=118bp MSEKLDGVRAYWNGKRLLSRNGNSFAAPKWFLDGLPEDMHLDGELWCGRGback to top mRNA from alignment at M-pyrifera_M_contig127724:78..501+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig127724.5584.1 ID=mRNA_M-pyrifera_M_contig127724.5584.1|Name=mRNA_M-pyrifera_M_contig127724.5584.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=424bp|location=Sequence derived from alignment at M-pyrifera_M_contig127724:78..501+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig127724:78..501+ >mRNA_M-pyrifera_M_contig127724.5584.1 ID=mRNA_M-pyrifera_M_contig127724.5584.1|Name=mRNA_M-pyrifera_M_contig127724.5584.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=708bp|location=Sequence derived from alignment at M-pyrifera_M_contig127724:78..501+ (Macrocystis pyrifera P11B4 male)back to top |