mRNA_M-pyrifera_M_contig127684.5572.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig127684.5572.1
Unique NamemRNA_M-pyrifera_M_contig127684.5572.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig127684.5572.1 vs. uniprot
Match: A0A4D6NUS1_VIGUN (Serine/threonine-protein kinase CTR1 n=3 Tax=Vigna TaxID=3913 RepID=A0A4D6NUS1_VIGUN)

HSP 1 Score: 93.6 bits (231), Expect = 5.210e-20
Identity = 52/113 (46.02%), Postives = 69/113 (61.06%), Query Frame = 1
Query:    4 CTQYPHLSLLLEYIPLGDLRDILTGHQVDT----PLLLKIAYDVAEGMKYLHERKIMHRDLKCDNIMITSLEVRPAVRVNAKVTDFGASKVLHSSQTMSKDVGTVRYMPPEVL 330
            CTQ P+L L+ EY+P G + D L  H+  T    P LLK+A DV EGMKYLH+  I+HRDLK  N++I    V        KV DFG ++V + S  M+ + GT R+M PEV+
Sbjct:  348 CTQSPNLYLVTEYMPGGSMFDFL--HKQKTALALPTLLKVAIDVCEGMKYLHQNNIIHRDLKAANLLIDENGV-------VKVADFGVARVHNQSGIMTAETGTYRWMAPEVI 451          
BLAST of mRNA_M-pyrifera_M_contig127684.5572.1 vs. uniprot
Match: A0A2Z6MN54_TRISU (Uncharacterized protein n=1 Tax=Trifolium subterraneum TaxID=3900 RepID=A0A2Z6MN54_TRISU)

HSP 1 Score: 93.2 bits (230), Expect = 6.700e-20
Identity = 51/111 (45.95%), Postives = 71/111 (63.96%), Query Frame = 1
Query:    4 CTQYPHLSLLLEYIPLGDLRDIL-TGHQVDT-PLLLKIAYDVAEGMKYLHERKIMHRDLKCDNIMITSLEVRPAVRVNAKVTDFGASKVLHSSQTMSKDVGTVRYMPPEVL 330
            CT+ P+L L+ EY+  G + D+L  G+ V T P LLK+A DV+EGMKYLH+  I+HRDLK  N++I    V        KV DFG ++V + S  M+ + GT R+M PEV+
Sbjct:  266 CTKPPYLYLVTEYLSGGSIYDLLHKGNTVLTLPSLLKVAIDVSEGMKYLHQNDIIHRDLKSANLLIDKTRV-------VKVADFGVARVRNQSGIMTAETGTYRWMAPEVI 369          
BLAST of mRNA_M-pyrifera_M_contig127684.5572.1 vs. uniprot
Match: V7AV67_PHAVU (Uncharacterized protein n=2 Tax=Phaseoleae TaxID=163735 RepID=V7AV67_PHAVU)

HSP 1 Score: 92.8 bits (229), Expect = 9.780e-20
Identity = 49/111 (44.14%), Postives = 69/111 (62.16%), Query Frame = 1
Query:    4 CTQYPHLSLLLEYIPLGDLRDILTGHQ--VDTPLLLKIAYDVAEGMKYLHERKIMHRDLKCDNIMITSLEVRPAVRVNAKVTDFGASKVLHSSQTMSKDVGTVRYMPPEVL 330
            CT+ P+L L+ EY+P G + D L   +  +  P LLK+A DV+EGMKYLH+  I+HRDLK  N++I    V        KV DFG ++V + S  M+ + GT R+M PEV+
Sbjct:  350 CTKPPNLYLVTEYMPGGSMFDFLHKQKTALTLPSLLKVAIDVSEGMKYLHQNNIIHRDLKASNLLIDENGV-------VKVADFGVARVHNQSGIMTAETGTYRWMAPEVI 453          
BLAST of mRNA_M-pyrifera_M_contig127684.5572.1 vs. uniprot
Match: A0A2K3NAX6_TRIPR (ACT-like tyrosine kinase family protein (Fragment) n=5 Tax=Trifolium pratense TaxID=57577 RepID=A0A2K3NAX6_TRIPR)

HSP 1 Score: 92.0 bits (227), Expect = 1.490e-19
Identity = 51/113 (45.13%), Postives = 71/113 (62.83%), Query Frame = 1
Query:    4 CTQYPHLSLLLEYIPLGDLRDILTGHQVDT----PLLLKIAYDVAEGMKYLHERKIMHRDLKCDNIMITSLEVRPAVRVNAKVTDFGASKVLHSSQTMSKDVGTVRYMPPEVL 330
            CT+ P+L L+ EY+  G + D+L  H+ +T    P LLKIA DV+EGMKYLH+  I+HRDLK  N++I    V        KV DFG ++V + S  M+ + GT R+M PEV+
Sbjct:  332 CTKTPYLYLVTEYLSGGSIYDLL--HKRNTVLTLPSLLKIAIDVSEGMKYLHQNDIIHRDLKSANLLIDKTGV-------VKVADFGVARVRNQSGIMTAETGTYRWMAPEVI 435          
BLAST of mRNA_M-pyrifera_M_contig127684.5572.1 vs. uniprot
Match: UPI000809FD1D (serine/threonine-protein kinase STY46-like isoform X1 n=1 Tax=Phaseolus angularis TaxID=3914 RepID=UPI000809FD1D)

HSP 1 Score: 92.0 bits (227), Expect = 1.670e-19
Identity = 51/113 (45.13%), Postives = 70/113 (61.95%), Query Frame = 1
Query:    4 CTQYPHLSLLLEYIPLGDLRDILTGHQVDT----PLLLKIAYDVAEGMKYLHERKIMHRDLKCDNIMITSLEVRPAVRVNAKVTDFGASKVLHSSQTMSKDVGTVRYMPPEVL 330
            CT+ P+L L+ EY+P G + D L  H+  T    P LLK+A DV+EGMKYLH+  I+HRDLK  N++I    V        KV DFG ++V + S  M+ + GT R+M PEV+
Sbjct:  278 CTKPPNLYLVTEYMPGGSMFDFL--HKQKTALALPCLLKVAIDVSEGMKYLHQNNIIHRDLKAANLLIDENGV-------VKVADFGVARVHNQSGIMTAETGTYRWMAPEVI 381          
BLAST of mRNA_M-pyrifera_M_contig127684.5572.1 vs. uniprot
Match: A0A3Q0EWB4_VIGRR (serine/threonine-protein kinase STY46 n=4 Tax=Vigna TaxID=3913 RepID=A0A3Q0EWB4_VIGRR)

HSP 1 Score: 91.7 bits (226), Expect = 2.590e-19
Identity = 51/113 (45.13%), Postives = 70/113 (61.95%), Query Frame = 1
Query:    4 CTQYPHLSLLLEYIPLGDLRDILTGHQVDT----PLLLKIAYDVAEGMKYLHERKIMHRDLKCDNIMITSLEVRPAVRVNAKVTDFGASKVLHSSQTMSKDVGTVRYMPPEVL 330
            CT+ P+L L+ EY+P G + D L  H+  T    P LLK+A DV+EGMKYLH+  I+HRDLK  N++I    V        KV DFG ++V + S  M+ + GT R+M PEV+
Sbjct:  346 CTKPPNLYLVTEYMPGGSMFDFL--HKQKTALALPSLLKVAIDVSEGMKYLHQNNIIHRDLKAANLLIDENGV-------VKVADFGVARVHNQSGIMTAETGTYRWMAPEVI 449          
BLAST of mRNA_M-pyrifera_M_contig127684.5572.1 vs. uniprot
Match: A0A022PT90_ERYGU (Uncharacterized protein n=1 Tax=Erythranthe guttata TaxID=4155 RepID=A0A022PT90_ERYGU)

HSP 1 Score: 90.9 bits (224), Expect = 4.700e-19
Identity = 44/111 (39.64%), Postives = 68/111 (61.26%), Query Frame = 1
Query:    4 CTQYPHLSLLLEYIPLGDLRDIL--TGHQVDTPLLLKIAYDVAEGMKYLHERKIMHRDLKCDNIMITSLEVRPAVRVNAKVTDFGASKVLHSSQTMSKDVGTVRYMPPEVL 330
            CT+ PHL ++ EY+P G L + L     ++  P LLK A DV +GM+YLHE+ ++HRDLK  N+++ +  V        KV DFG ++  ++   M+ + GT R+M PEV+
Sbjct:  352 CTKLPHLCIITEYMPRGSLYEYLHKNHRELKLPQLLKYAIDVCKGMEYLHEKNVIHRDLKTANLLMDTSNV-------VKVADFGVARFQNNGGVMTAETGTYRWMAPEVI 455          
BLAST of mRNA_M-pyrifera_M_contig127684.5572.1 vs. uniprot
Match: A0A6I9URH6_SESIN (serine/threonine-protein kinase STY8-like n=1 Tax=Sesamum indicum TaxID=4182 RepID=A0A6I9URH6_SESIN)

HSP 1 Score: 90.9 bits (224), Expect = 4.720e-19
Identity = 44/111 (39.64%), Postives = 68/111 (61.26%), Query Frame = 1
Query:    4 CTQYPHLSLLLEYIPLGDLRDILTGHQV--DTPLLLKIAYDVAEGMKYLHERKIMHRDLKCDNIMITSLEVRPAVRVNAKVTDFGASKVLHSSQTMSKDVGTVRYMPPEVL 330
            CT+ PHL ++ EY+P G L + L  H +    P LLK A DV +GM+YLH++ ++HRDLK  N+++ +  V        KV DFG ++  ++   M+ + GT R+M PEV+
Sbjct:  356 CTKLPHLCIVTEYMPGGSLYEYLHKHHLVLKLPQLLKFAIDVCKGMEYLHQKNVIHRDLKTANLLMDTCNV-------VKVADFGVARFQNNGGVMTAETGTYRWMAPEVI 459          
BLAST of mRNA_M-pyrifera_M_contig127684.5572.1 vs. uniprot
Match: A0A151TCQ4_CAJCA (Putative serine/threonine-protein kinase DDB-G0267514 n=5 Tax=Cajanus cajan TaxID=3821 RepID=A0A151TCQ4_CAJCA)

HSP 1 Score: 90.9 bits (224), Expect = 4.750e-19
Identity = 49/111 (44.14%), Postives = 69/111 (62.16%), Query Frame = 1
Query:    4 CTQYPHLSLLLEYIPLGDLRDILTGHQ--VDTPLLLKIAYDVAEGMKYLHERKIMHRDLKCDNIMITSLEVRPAVRVNAKVTDFGASKVLHSSQTMSKDVGTVRYMPPEVL 330
            CT+ P+L L+ EY+  G + D L   +  +D P LLK+A DV+EGMKYLH+  I+HRDLK  N++I    V        KV DFG ++V + S  M+ + GT R+M PEV+
Sbjct:  359 CTKPPNLYLVTEYMSGGSMFDFLHKQKTVLDLPSLLKVAIDVSEGMKYLHQNDIIHRDLKAANLLIDENWV-------VKVADFGVARVHNQSGIMTAETGTYRWMAPEVI 462          
BLAST of mRNA_M-pyrifera_M_contig127684.5572.1 vs. uniprot
Match: L7FKQ5_ENTIV (Serine/threonine protein kinase HT1, putative n=2 Tax=Entamoeba invadens IP1 TaxID=370355 RepID=L7FKQ5_ENTIV)

HSP 1 Score: 89.7 bits (221), Expect = 4.970e-19
Identity = 44/109 (40.37%), Postives = 72/109 (66.06%), Query Frame = 1
Query:   22 LSLLLEYIPLGDLRDIL---TGHQVDTPLLLKIAYDVAEGMKYLHERKIMHRDLKCDNIMITSLEVRPAVRVNAKVTDFGASK---VLHSSQTMSKDVGTVRYMPPEVL 330
            + L+ E+   G ++D++   T  +VD  + +KI  D A+G+ YLHE  I+HRD+K DNI++ SL++    +VN K+TDFG+S+   +L ++ T +K +GT  YM PE+L
Sbjct:  154 VCLVTEFAQFGSMQDLMKHKTNEEVDVKMRIKIMIDAAQGIYYLHENNILHRDIKPDNILVISLDLNN--KVNGKLTDFGSSRNINLLMTNMTFTKGIGTPTYMAPEIL 260          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig127684.5572.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A4D6NUS1_VIGUN5.210e-2046.02Serine/threonine-protein kinase CTR1 n=3 Tax=Vigna... [more]
A0A2Z6MN54_TRISU6.700e-2045.95Uncharacterized protein n=1 Tax=Trifolium subterra... [more]
V7AV67_PHAVU9.780e-2044.14Uncharacterized protein n=2 Tax=Phaseoleae TaxID=1... [more]
A0A2K3NAX6_TRIPR1.490e-1945.13ACT-like tyrosine kinase family protein (Fragment)... [more]
UPI000809FD1D1.670e-1945.13serine/threonine-protein kinase STY46-like isoform... [more]
A0A3Q0EWB4_VIGRR2.590e-1945.13serine/threonine-protein kinase STY46 n=4 Tax=Vign... [more]
A0A022PT90_ERYGU4.700e-1939.64Uncharacterized protein n=1 Tax=Erythranthe guttat... [more]
A0A6I9URH6_SESIN4.720e-1939.64serine/threonine-protein kinase STY8-like n=1 Tax=... [more]
A0A151TCQ4_CAJCA4.750e-1944.14Putative serine/threonine-protein kinase DDB-G0267... [more]
L7FKQ5_ENTIV4.970e-1940.37Serine/threonine protein kinase HT1, putative n=2 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig127684contigM-pyrifera_M_contig127684:26..355 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeViridiplantae
Seed ortholog score92.8
Seed ortholog evalue1.1e-16
Seed eggNOG ortholog3885.XP_007136132.1
KEGG koko:K17535
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0004672,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0007154,GO:0007165,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019538,GO:0023052,GO:0035556,GO:0036211,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044464,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0065007,GO:0071704,GO:0140096,GO:1901564
EggNOG free text desc.Serine threonine-protein kinase
EggNOG OGs37N3E@33090,3GGHT@35493,4JD8Y@91835,COG0515@1,KOG0192@2759
EC2.7.11.1
COG Functional cat.T
Best tax levelfabids
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko01001
Exons1
Model size330
Cds size330
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815790.7183752-CDS-M-pyrifera_M_contig127684:25..3551622815790.7183752-CDS-M-pyrifera_M_contig127684:25..355Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig127684 26..355 -
1692277571.0046926-CDS-M-pyrifera_M_contig127684:25..3551692277571.0046926-CDS-M-pyrifera_M_contig127684:25..355Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig127684 26..355 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig127684.5572.1prot_M-pyrifera_M_contig127684.5572.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig127684 26..355 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig127684.5572.1

>prot_M-pyrifera_M_contig127684.5572.1 ID=prot_M-pyrifera_M_contig127684.5572.1|Name=mRNA_M-pyrifera_M_contig127684.5572.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=110bp
VCTQYPHLSLLLEYIPLGDLRDILTGHQVDTPLLLKIAYDVAEGMKYLHE
RKIMHRDLKCDNIMITSLEVRPAVRVNAKVTDFGASKVLHSSQTMSKDVG
TVRYMPPEVL
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mRNA from alignment at M-pyrifera_M_contig127684:26..355-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig127684.5572.1 ID=mRNA_M-pyrifera_M_contig127684.5572.1|Name=mRNA_M-pyrifera_M_contig127684.5572.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=330bp|location=Sequence derived from alignment at M-pyrifera_M_contig127684:26..355- (Macrocystis pyrifera P11B4 male)
GTGTGCACGCAGTATCCTCATTTGTCTCTCTTGCTGGAGTACATTCCCCT GGGAGATCTGCGTGACATCTTGACAGGCCACCAGGTGGACACTCCTCTCC TTCTCAAGATTGCCTACGACGTGGCAGAGGGCATGAAGTACCTGCACGAG CGCAAGATCATGCACCGTGACCTCAAGTGCGACAACATCATGATCACCAG CCTCGAGGTCAGGCCTGCTGTCCGTGTGAATGCCAAGGTAACAGATTTTG GTGCCTCCAAGGTTCTGCATTCCTCTCAAACCATGAGCAAGGACGTGGGC ACTGTCCGCTACATGCCACCGGAGGTTTTG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig127684:26..355-

>mRNA_M-pyrifera_M_contig127684.5572.1 ID=mRNA_M-pyrifera_M_contig127684.5572.1|Name=mRNA_M-pyrifera_M_contig127684.5572.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=660bp|location=Sequence derived from alignment at M-pyrifera_M_contig127684:26..355- (Macrocystis pyrifera P11B4 male)
GTGTGCACGCAGTATCCTCATTTGTCTCTCTTGCTGGAGTACATTCCCCT
GGGAGATCTGCGTGACATCTTGACAGGCCACCAGGTGGACACTCCTCTCC
TTCTCAAGATTGCCTACGACGTGGCAGAGGGCATGAAGTACCTGCACGAG
CGCAAGATCATGCACCGTGACCTCAAGTGCGACAACATCATGATCACCAG
CCTCGAGGTCAGGCCTGCTGTCCGTGTGAATGCCAAGGTAACAGATTTTG
GTGCCTCCAAGGTTCTGCATTCCTCTCAAACCATGAGCAAGGACGTGGGC
ACTGTCCGCTACATGCCACCGGAGGTTTTGGTGTGCACGCAGTATCCTCA
TTTGTCTCTCTTGCTGGAGTACATTCCCCTGGGAGATCTGCGTGACATCT
TGACAGGCCACCAGGTGGACACTCCTCTCCTTCTCAAGATTGCCTACGAC
GTGGCAGAGGGCATGAAGTACCTGCACGAGCGCAAGATCATGCACCGTGA
CCTCAAGTGCGACAACATCATGATCACCAGCCTCGAGGTCAGGCCTGCTG
TCCGTGTGAATGCCAAGGTAACAGATTTTGGTGCCTCCAAGGTTCTGCAT
TCCTCTCAAACCATGAGCAAGGACGTGGGCACTGTCCGCTACATGCCACC
GGAGGTTTTG
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