mRNA_M-pyrifera_M_contig127536.5551.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig127536.5551.1 vs. uniprot
Match: A0A5C3LAZ2_9AGAR (SCD domain-containing protein n=1 Tax=Coprinopsis marcescibilis TaxID=230819 RepID=A0A5C3LAZ2_9AGAR) HSP 1 Score: 52.8 bits (125), Expect = 3.890e-6 Identity = 30/74 (40.54%), Postives = 40/74 (54.05%), Query Frame = 1
Query: 19 EEVVDRVFKQRYRDLSGSVRAAVLRVYGRCLAAM-GPLLDTRKLRYLGWLLNDSEDEVRAAAATAVETVLRAPD 237
+E VD VF RYRDL ++RA ++ G+ G LD LRY+GW+L+DS VR A A+ V D
Sbjct: 350 KEFVDGVFVHRYRDLDPNIRAECVKAIGQWFKKYPGHFLDGTYLRYVGWVLSDSNTHVRLEAVKALSGVYEQAD 423
BLAST of mRNA_M-pyrifera_M_contig127536.5551.1 vs. uniprot
Match: F8PSG2_SERL3 (SCD domain-containing protein (Fragment) n=2 Tax=Serpula lacrymans var. lacrymans TaxID=341189 RepID=F8PSG2_SERL3) HSP 1 Score: 52.0 bits (123), Expect = 7.250e-6 Identity = 30/74 (40.54%), Postives = 40/74 (54.05%), Query Frame = 1
Query: 19 EEVVDRVFKQRYRDLSGSVRAAVLRVYGRCLAAM-GPLLDTRKLRYLGWLLNDSEDEVRAAAATAVETVLRAPD 237
+EVVD VF RYRDL ++RA +R G LD LRY+GW+L+DS +VR A ++ V D
Sbjct: 203 KEVVDGVFVHRYRDLDPNIRAECVRAMGLWFRRYPAHFLDASYLRYVGWVLSDSNTQVRLEAVKSLTGVYEQVD 276
BLAST of mRNA_M-pyrifera_M_contig127536.5551.1 vs. uniprot
Match: A0A4Q2D7Z8_9AGAR (SCD domain-containing protein n=1 Tax=Candolleomyces aberdarensis TaxID=2316362 RepID=A0A4Q2D7Z8_9AGAR) HSP 1 Score: 51.6 bits (122), Expect = 9.950e-6 Identity = 30/74 (40.54%), Postives = 39/74 (52.70%), Query Frame = 1
Query: 19 EEVVDRVFKQRYRDLSGSVRAAVLRVYGRCLAAM-GPLLDTRKLRYLGWLLNDSEDEVRAAAATAVETVLRAPD 237
+E VD VF RYRDL ++RA ++ G G LD LRY+GW+L+DS VR A A+ V D
Sbjct: 345 KEFVDGVFVHRYRDLDPNIRAECVKAIGMWFKKYPGHFLDGTYLRYVGWVLSDSNTHVRLEAVKALSGVYEQGD 418
BLAST of mRNA_M-pyrifera_M_contig127536.5551.1 vs. uniprot
Match: A0A8H5HJ66_9AGAR (SCD domain-containing protein n=1 Tax=Tricholomella constricta TaxID=117010 RepID=A0A8H5HJ66_9AGAR) HSP 1 Score: 51.6 bits (122), Expect = 9.960e-6 Identity = 29/69 (42.03%), Postives = 38/69 (55.07%), Query Frame = 1
Query: 19 EEVVDRVFKQRYRDLSGSVRAAVLRVYGRCLAAM-GPLLDTRKLRYLGWLLNDSEDEVRAAAATAVETV 222
+E VD VF RYRDL ++RA +R G G LD LRY+GW+L+DS VR A ++ V
Sbjct: 357 KEFVDGVFVHRYRDLDPNIRAECVRAIGLWFKKYPGHFLDAAYLRYVGWVLSDSNTHVRLEAVKSLSGV 425
BLAST of mRNA_M-pyrifera_M_contig127536.5551.1 vs. uniprot
Match: A0A8H5F498_9AGAR (SCD domain-containing protein n=2 Tax=Tulosesus angulatus TaxID=980116 RepID=A0A8H5F498_9AGAR) HSP 1 Score: 51.6 bits (122), Expect = 9.960e-6 Identity = 30/74 (40.54%), Postives = 39/74 (52.70%), Query Frame = 1
Query: 19 EEVVDRVFKQRYRDLSGSVRAAVLRVYGRCLAAM-GPLLDTRKLRYLGWLLNDSEDEVRAAAATAVETVLRAPD 237
+E VD VF RYRDL ++RA ++ G G LD LRY+GW+L+DS VR A A+ V D
Sbjct: 358 KEFVDGVFVHRYRDLDPNIRAECVKAIGLWFKKYPGHFLDGAYLRYVGWVLSDSNTSVRLEAVKALSGVYEQAD 431
BLAST of mRNA_M-pyrifera_M_contig127536.5551.1 vs. uniprot
Match: A0A409XP94_PSICY (SCD domain-containing protein n=1 Tax=Psilocybe cyanescens TaxID=93625 RepID=A0A409XP94_PSICY) HSP 1 Score: 51.2 bits (121), Expect = 1.360e-5 Identity = 29/69 (42.03%), Postives = 39/69 (56.52%), Query Frame = 1
Query: 19 EEVVDRVFKQRYRDLSGSVRAAVLRVYGRCLAAMGP-LLDTRKLRYLGWLLNDSEDEVRAAAATAVETV 222
+E VD VF R+RDL ++RA +R G L LD LRY+GW+L+DS + VR A A+ V
Sbjct: 345 KEFVDGVFVHRFRDLDPNIRAECVRAIGLWLRKYPDHFLDAHYLRYVGWVLSDSNNHVRLEAVKALSGV 413
BLAST of mRNA_M-pyrifera_M_contig127536.5551.1 vs. uniprot
Match: A0A4Y7SYE0_9AGAR (SCD domain-containing protein n=1 Tax=Coprinellus micaceus TaxID=71717 RepID=A0A4Y7SYE0_9AGAR) HSP 1 Score: 51.2 bits (121), Expect = 1.360e-5 Identity = 30/74 (40.54%), Postives = 39/74 (52.70%), Query Frame = 1
Query: 19 EEVVDRVFKQRYRDLSGSVRAAVLRVYGRCLAAM-GPLLDTRKLRYLGWLLNDSEDEVRAAAATAVETVLRAPD 237
+E VD VF RYRDL ++RA ++ G G LD LRY+GW+L+DS VR A A+ V D
Sbjct: 339 KEFVDGVFVHRYRDLDPNIRAECVKAIGLWFKKYPGHFLDGAYLRYVGWVLSDSNTHVRLEAVRALSGVYEQGD 412
BLAST of mRNA_M-pyrifera_M_contig127536.5551.1 vs. uniprot
Match: A0A8H5BL55_9AGAR (SCD domain-containing protein n=1 Tax=Psilocybe cf. subviscida TaxID=2480587 RepID=A0A8H5BL55_9AGAR) HSP 1 Score: 50.8 bits (120), Expect = 1.860e-5 Identity = 26/69 (37.68%), Postives = 41/69 (59.42%), Query Frame = 1
Query: 19 EEVVDRVFKQRYRDLSGSVRAAVLRVYGRCLAAMGP-LLDTRKLRYLGWLLNDSEDEVRAAAATAVETV 222
+++VD VF R+RDL ++RA + G L LD LRY+GW+L+D+++ VR A A+ +V
Sbjct: 352 KDIVDGVFVHRFRDLDPNIRAECVHALGLWLRKYPDHFLDAHYLRYIGWVLSDTDNHVRLEAVKALSSV 420
BLAST of mRNA_M-pyrifera_M_contig127536.5551.1 vs. uniprot
Match: A0A1R1PK76_ZANCU (Cohesin subunit SA-3 (Fragment) n=1 Tax=Zancudomyces culisetae TaxID=1213189 RepID=A0A1R1PK76_ZANCU) HSP 1 Score: 50.4 bits (119), Expect = 2.480e-5 Identity = 27/78 (34.62%), Postives = 42/78 (53.85%), Query Frame = 1
Query: 7 GVWEEEVVDRVFKQRYRDLSGSVRAAVLRVYGRCLAAMG-PLLDTRKLRYLGWLLNDSEDEVRAAAATAVETVLRAPD 237
G W V+ ++ RYRD+ +RA ++ G + LL+T+ LRY GWL++D D+VR AA V ++ D
Sbjct: 369 GDW---VLTKILHLRYRDVYDGIRAETIKYLGEWIREDSISLLETKYLRYFGWLMHDDSDKVRHAAVEGVRKIISRGD 443
BLAST of mRNA_M-pyrifera_M_contig127536.5551.1 vs. uniprot
Match: UPI0004409C90 (uncharacterized protein n=1 Tax=Fomitiporia mediterranea (strain MF3/22) TaxID=694068 RepID=UPI0004409C90) HSP 1 Score: 50.4 bits (119), Expect = 2.540e-5 Identity = 28/74 (37.84%), Postives = 40/74 (54.05%), Query Frame = 1
Query: 19 EEVVDRVFKQRYRDLSGSVRAAVLRVYGRCLAAM-GPLLDTRKLRYLGWLLNDSEDEVRAAAATAVETVLRAPD 237
+E D VF RYRDL ++RA + G L LD + LRY+GW+L+D+ VR A A+ ++ PD
Sbjct: 224 KEFFDGVFIHRYRDLDPNIRAECVHAMGEWLKRFPAHFLDGQYLRYIGWVLSDTNIHVRLEAVKALASLYAKPD 297 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig127536.5551.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 18
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig127536.5551.1 >prot_M-pyrifera_M_contig127536.5551.1 ID=prot_M-pyrifera_M_contig127536.5551.1|Name=mRNA_M-pyrifera_M_contig127536.5551.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=79bp MRGVWEEEVVDRVFKQRYRDLSGSVRAAVLRVYGRCLAAMGPLLDTRKLRback to top mRNA from alignment at M-pyrifera_M_contig127536:252..488+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig127536.5551.1 ID=mRNA_M-pyrifera_M_contig127536.5551.1|Name=mRNA_M-pyrifera_M_contig127536.5551.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=237bp|location=Sequence derived from alignment at M-pyrifera_M_contig127536:252..488+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig127536:252..488+ >mRNA_M-pyrifera_M_contig127536.5551.1 ID=mRNA_M-pyrifera_M_contig127536.5551.1|Name=mRNA_M-pyrifera_M_contig127536.5551.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=474bp|location=Sequence derived from alignment at M-pyrifera_M_contig127536:252..488+ (Macrocystis pyrifera P11B4 male)back to top |