mRNA_M-pyrifera_M_contig127519.5548.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig127519.5548.1 vs. uniprot
Match: A7BSC9_9GAMM (Sel1-like repeat n=1 Tax=Beggiatoa sp. PS TaxID=422289 RepID=A7BSC9_9GAMM) HSP 1 Score: 66.2 bits (160), Expect = 2.080e-10 Identity = 31/78 (39.74%), Postives = 55/78 (70.51%), Query Frame = 1
Query: 94 QLANDGDSESQFFLGKYYYE-DSERLMQDYKEAFDWFTKAAEQEHIDAQKYLASCYKEGLGVSQNDEEAFFWLQKAAK 324
Q A G++E+Q+ LG+ + + E +++ +++A DWF KAAEQ HI+AQ +LA Y+ G G++QN ++A +W ++ A+
Sbjct: 202 QAAERGNAEAQYRLGREEEKLEHEEILEHHEKAVDWFQKAAEQGHIEAQFHLAQAYETGQGIAQNQKQAVYWYRQVAE 279
BLAST of mRNA_M-pyrifera_M_contig127519.5548.1 vs. uniprot
Match: UPI001B7D38A1 (sel1 repeat family protein n=3 Tax=Psychrobacter celer TaxID=306572 RepID=UPI001B7D38A1) HSP 1 Score: 62.8 bits (151), Expect = 9.250e-10 Identity = 35/76 (46.05%), Postives = 45/76 (59.21%), Query Frame = 1
Query: 97 LANDGDSESQFFLGKYYYEDSER--------LMQDYKEAFDWFTKAAEQEHIDAQKYLASCYKEGLGVSQNDEEAF 300
LA GD ++QF +G +Y E+ + + Y++A DWFTKAAEQ H DAQ L Y+ GLGVS ND AF
Sbjct: 13 LAEQGDMQAQFNMGLTHYNGIEKGDGKGYTLITRGYEKAVDWFTKAAEQGHADAQNNLGLMYRAGLGVSHNDYVAF 88
BLAST of mRNA_M-pyrifera_M_contig127519.5548.1 vs. uniprot
Match: A0A6M4P9K3_9GAMM (Sel1 repeat protein n=1 Tax=Psychrobacter sp. TaxID=56811 RepID=A0A6M4P9K3_9GAMM) HSP 1 Score: 62.0 bits (149), Expect = 1.810e-9 Identity = 35/76 (46.05%), Postives = 45/76 (59.21%), Query Frame = 1
Query: 85 ELTQLANDGDSESQFFLGKYYYEDSER--------LMQDYKEAFDWFTKAAEQEHIDAQKYLASCYKEGLGVSQND 288
E LA GD E+QF +G +Y E+ + + Y++AF+WFTKAAEQ H DAQ L YK GLGVS +D
Sbjct: 9 ETKVLAEQGDMEAQFNMGFTHYNGIEKGDGKEYTVITRGYEKAFEWFTKAAEQGHADAQNNLGLMYKAGLGVSHDD 84
BLAST of mRNA_M-pyrifera_M_contig127519.5548.1 vs. uniprot
Match: UPI001E39EB8A (sel1 repeat family protein n=1 Tax=Aeromonas veronii TaxID=654 RepID=UPI001E39EB8A) HSP 1 Score: 61.6 bits (148), Expect = 4.230e-9 Identity = 32/67 (47.76%), Postives = 44/67 (65.67%), Query Frame = 1
Query: 94 QLANDGDSESQFFLGKYYYEDSERLMQDYKEAFDWFTKAAEQEHIDAQKYLASCYKEGLGVSQNDEE 294
Q GD E+Q+ LG YYED + ++ A WFTKAAEQ H+DAQ+YLA Y GLGV +++++
Sbjct: 10 QATEQGDVEAQYNLGLMYYEDEDG--EEDSRAVVWFTKAAEQGHVDAQRYLAVIYGNGLGVEKDNDQ 74
BLAST of mRNA_M-pyrifera_M_contig127519.5548.1 vs. uniprot
Match: UPI000694BD4F (sel1 repeat family protein n=1 Tax=Necropsobacter massiliensis TaxID=1400001 RepID=UPI000694BD4F) HSP 1 Score: 59.7 bits (143), Expect = 2.150e-8 Identity = 27/66 (40.91%), Postives = 43/66 (65.15%), Query Frame = 1
Query: 127 FFLGKYYYEDSERLMQDYKEAFDWFTKAAEQEHIDAQKYLASCYKEGLGVSQNDEEAFFWLQKAAK 324
F LG YY D +QD+K AF WF KAA +H +++ LA+ Y+EG G+ +N+++A +W ++ K
Sbjct: 152 FILGVLYYRD----LQDFKNAFIWFEKAANTDHNESKFRLATMYEEGKGIKKNEQKAIYWYRETLK 213
BLAST of mRNA_M-pyrifera_M_contig127519.5548.1 vs. uniprot
Match: UPI0004659233 (sel1 repeat family protein n=1 Tax=Tolumonas lignilytica TaxID=1283284 RepID=UPI0004659233) HSP 1 Score: 57.8 bits (138), Expect = 9.840e-8 Identity = 32/82 (39.02%), Postives = 53/82 (64.63%), Query Frame = 1
Query: 85 ELTQLANDGDSESQFFLGKYYYEDSE--RLMQDYKEAFDWFTKAAEQEHIDAQKYLASCYKEGLGVSQNDEEAFFWLQKAAK 324
+L +LAN+G+ ++QF+L + Y DS+ + + AFDW+ KAAE HI+AQ+ LA +K+ + N E+A +W K+A+
Sbjct: 32 QLLELANNGNVDAQFYLAQEYLRDSKFNSTTKSQEMAFDWYIKAAENGHIEAQEKLALLFKD----NGNIEKAIYWYTKSAQ 109
BLAST of mRNA_M-pyrifera_M_contig127519.5548.1 vs. uniprot
Match: A0A845R2T3_9FIRM (Sel1 repeat family protein n=2 Tax=Colidextribacter sp. OB.20 TaxID=2304568 RepID=A0A845R2T3_9FIRM) HSP 1 Score: 58.5 bits (140), Expect = 1.050e-7 Identity = 29/63 (46.03%), Postives = 40/63 (63.49%), Query Frame = 1
Query: 88 LTQLANDGDSESQFFLGKYYYEDSERLMQDYKEAFDWFTKAAEQEHIDAQKYLASCYKEGLGV 276
L A DGD E+Q+ LG+ YY + +D K+AF WF++AAE ++I AQ YL CY G+G
Sbjct: 37 LQSAAEDGDLEAQYSLGRSYYYGEDGAPKDGKQAFYWFSRAAEGDNIAAQYYLGLCYVRGIGT 99
BLAST of mRNA_M-pyrifera_M_contig127519.5548.1 vs. uniprot
Match: A0A397TKM7_9GLOM (Uncharacterized protein n=1 Tax=Glomus cerebriforme TaxID=658196 RepID=A0A397TKM7_9GLOM) HSP 1 Score: 56.6 bits (135), Expect = 3.210e-7 Identity = 26/71 (36.62%), Postives = 48/71 (67.61%), Query Frame = 1
Query: 85 ELTQLANDGDSESQFFLGKYYYEDSERLMQDYKEAFDWFTKAAEQEHIDAQKYLASCYKEGLGVSQNDEEA 297
+L +LA + DSE+Q+ L YYY++ + +Y++AF WF ++AE+ + AQ L CY +G G+ +++++A
Sbjct: 158 KLLKLAENDDSEAQYNLAIYYYQNGSIVKTNYEKAFKWFLRSAEKGNPCAQHMLGICYMDGKGIQRDEKKA 228
BLAST of mRNA_M-pyrifera_M_contig127519.5548.1 vs. uniprot
Match: A0A2A4UD17_9PROT (Uncharacterized protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A2A4UD17_9PROT) HSP 1 Score: 56.2 bits (134), Expect = 6.550e-7 Identity = 39/97 (40.21%), Postives = 53/97 (54.64%), Query Frame = 1
Query: 37 TRKTDALSSASSQVHLELTQLANDGDSESQFFLGKYYYEDSERLMQDYKEAFDWFTKAAEQEHIDAQKYLASCYKEGLG-VSQNDEEAFFWLQKAAK 324
T+ T+A L A +GD SQF LG Y Y + + DYK+A WFTKAAEQ+ + +Q YLA+ +EG G V+Q+ + W K AK
Sbjct: 24 TQATEAAEDREYPAPSTLIPKAKNGDIWSQFTLG-YIYSHGKGVGPDYKKALKWFTKAAEQDDLISQYYLATILEEGSGEVAQDYGASANWYLKIAK 119
BLAST of mRNA_M-pyrifera_M_contig127519.5548.1 vs. uniprot
Match: UPI00191D03D8 (sel1 repeat family protein n=1 Tax=Aeromonas caviae TaxID=648 RepID=UPI00191D03D8) HSP 1 Score: 55.1 bits (131), Expect = 1.100e-6 Identity = 29/74 (39.19%), Postives = 47/74 (63.51%), Query Frame = 1
Query: 103 NDGDSESQFFLGKYYYEDSERLMQDYKEAFDWFTKAAEQEHIDAQKYLASCYKEGLGVSQNDEEAFFWLQKAAK 324
N S Q+ LG+ +Y + + ++++Y +AF F AA QEH AQ L Y G G+S+++E+A++WL +AAK
Sbjct: 10 NKSHSHMQYLLGERFY-NGQGVVKNYTKAFFHFKLAAIQEHACAQFELGMMYLSGCGISRDEEQAYYWLVRAAK 82 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig127519.5548.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig127519.5548.1 >prot_M-pyrifera_M_contig127519.5548.1 ID=prot_M-pyrifera_M_contig127519.5548.1|Name=mRNA_M-pyrifera_M_contig127519.5548.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=108bp FVSGIVKKSLKKTRKTDALSSASSQVHLELTQLANDGDSESQFFLGKYYYback to top mRNA from alignment at M-pyrifera_M_contig127519:3..326- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig127519.5548.1 ID=mRNA_M-pyrifera_M_contig127519.5548.1|Name=mRNA_M-pyrifera_M_contig127519.5548.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=324bp|location=Sequence derived from alignment at M-pyrifera_M_contig127519:3..326- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig127519:3..326- >mRNA_M-pyrifera_M_contig127519.5548.1 ID=mRNA_M-pyrifera_M_contig127519.5548.1|Name=mRNA_M-pyrifera_M_contig127519.5548.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=648bp|location=Sequence derived from alignment at M-pyrifera_M_contig127519:3..326- (Macrocystis pyrifera P11B4 male)back to top |