mRNA_M-pyrifera_M_contig127497.5540.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig127497.5540.1 vs. uniprot
Match: A0A3D5DH57_9GAMM (Uncharacterized protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3D5DH57_9GAMM) HSP 1 Score: 218 bits (554), Expect = 1.720e-69 Identity = 105/135 (77.78%), Postives = 115/135 (85.19%), Query Frame = 1
Query: 1 GEELSWGQHLFGWGTPAYLEAVNDQEETNLHNISSWFDQKPRLLLEIWVLVGGVILPLTRLARGQSYDRADERYWFWPTTELLPTAALAILVRLPERIKSLFDIAQLPLELRFSEPQEYYFALFLLLYLLSIDRR 405
GEELSWGQHLFGW TPAYLE VNDQEETNLHNISSWFDQKPR+LLE+WVL+GGV+ PL L R + + YWFWPT E LP+AALAIL+RLPER+KSLFDI QLPLELRFSEPQEYYFALFL +YL SI RR
Sbjct: 96 GEELSWGQHLFGWSTPAYLEEVNDQEETNLHNISSWFDQKPRMLLELWVLIGGVVWPL--LHRPGATTVGSDSYWFWPTIEALPSAALAILIRLPERLKSLFDIEQLPLELRFSEPQEYYFALFLFIYLASILRR 228
BLAST of mRNA_M-pyrifera_M_contig127497.5540.1 vs. uniprot
Match: A0A523NUU4_9PROT (Uncharacterized protein n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A523NUU4_9PROT) HSP 1 Score: 214 bits (546), Expect = 4.130e-68 Identity = 103/137 (75.18%), Postives = 116/137 (84.67%), Query Frame = 1
Query: 1 GEELSWGQHLFGWGTPAYLEAVNDQEETNLHNISSWFDQKPRLLLEIWVLVGGVILPLTRLARGQSYDRAD-ERYWFWPTTELLPTAALAILVRLPERIKSLFDIAQLPLELRFSEPQEYYFALFLLLYLLSIDRRL 408
GEELSWGQHL GW TP YLEA+NDQEETNLHNISSWFDQKPRLLLE+WVL+GGV+ PL RL++ + E +W WPT E+LPTA LAI VRLPERIK+LF+I QLPLE+RFSEPQEYYFALFLL+YL SI RRL
Sbjct: 96 GEELSWGQHLVGWATPEYLEAINDQEETNLHNISSWFDQKPRLLLELWVLIGGVVWPLYRLSKRSPLTVTNGEGFWLWPTAEVLPTALLAIFVRLPERIKTLFEIDQLPLEIRFSEPQEYYFALFLLIYLASIRRRL 232
BLAST of mRNA_M-pyrifera_M_contig127497.5540.1 vs. uniprot
Match: A0A1G0JMP7_9GAMM (Uncharacterized protein n=1 Tax=Gammaproteobacteria bacterium RIFCSPLOWO2_12_47_11 TaxID=1798301 RepID=A0A1G0JMP7_9GAMM) HSP 1 Score: 172 bits (435), Expect = 2.310e-51 Identity = 82/137 (59.85%), Postives = 99/137 (72.26%), Query Frame = 1
Query: 1 GEELSWGQHLFGWGTPAYLEAVNDQEETNLHNISSWFDQKPRLLLEIWVLVGGVILPLTRLARGQSYDRADERYWFWPTTELLPTAALAILVRLPERIKSLFDIAQLPLELRFSEPQEYYFALFLLLYLLSIDRRLR 411
GEELSWGQ LF W TP ++A+NDQ ETNLHNISSW DQKPRLL+E+WVLVGG++LPL R +R SY RYWFWP LP A LAILV++PER++ FD +R+SE QE+Y ALFL +YL S RL+
Sbjct: 94 GEELSWGQQLFNWETPEKIQAINDQNETNLHNISSWLDQKPRLLVELWVLVGGIVLPLWRYSRRISYSPDSWRYWFWPDHVCLPAATLAILVKVPERLRDNFDYRLFEHNVRYSELQEFYIALFLSMYLYSFYIRLK 230
BLAST of mRNA_M-pyrifera_M_contig127497.5540.1 vs. uniprot
Match: A0A661C191_9GAMM (Uncharacterized protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A661C191_9GAMM) HSP 1 Score: 163 bits (413), Expect = 4.630e-48 Identity = 78/135 (57.78%), Postives = 101/135 (74.81%), Query Frame = 1
Query: 1 GEELSWGQHLFGWGTPAYLEAVNDQEETNLHNISSWFDQKPRLLLEIWVLVGGVILPLTRLARGQSYDRADERYWFWPTTELLPTAALAILVRLPERIKSLFDIAQLPLELRFSEPQEYYFALFLLLYLLSIDRR 405
GEE+SWGQ L GWGTP +++ VNDQ ETNLHN SSW DQKPRLLLE++V+V G+ LPL R +G + +YW +PT LP A LAIL R+PERIK+LFD++ + ++R+SE QE YFA+FL +YL SI +R
Sbjct: 92 GEEISWGQQLVGWGTPDWVKEVNDQHETNLHNTSSWLDQKPRLLLEMFVIVCGIYLPLKRKLQGINLPVDSWQYWLYPTIVCLPAAILAILSRMPERIKNLFDLSGVVFDVRYSEVQELYFAIFLTVYLFSIRKR 226
BLAST of mRNA_M-pyrifera_M_contig127497.5540.1 vs. uniprot
Match: A0A8I2JZ88_9BACT (Uncharacterized protein (Fragment) n=1 Tax=Candidatus Aminicenantes bacterium TaxID=2052149 RepID=A0A8I2JZ88_9BACT) HSP 1 Score: 160 bits (406), Expect = 1.490e-47 Identity = 75/136 (55.15%), Postives = 95/136 (69.85%), Query Frame = 1
Query: 1 GEELSWGQHLFGWGTPAYLEAVNDQEETNLHNISSWFDQKPRLLLEIWVLVGGVILPLTRLARGQSYDRADERYWFWPTTELLPTAALAILVRLPERIKSLFDIAQLPLELRFSEPQEYYFALFLLLYLLSIDRRL 408
GEE+SWGQ LFGW +P ++ +NDQ+ETN+HNISSWFDQKPRLLLE+W+++GG+ + R + Y YWFWP P A LA LV+LPERIK F I LP +LR+SE QE FA+FL+ YL S +RL
Sbjct: 50 GEEISWGQQLFGWQSPEIMQEINDQQETNIHNISSWFDQKPRLLLELWIIIGGIFVAALRKWKPGIYKTDRWSYWFWPGFACFPAALLAELVKLPERIKDNFGITSLPTDLRYSELQELLFAMFLMCYLASNFKRL 185
BLAST of mRNA_M-pyrifera_M_contig127497.5540.1 vs. uniprot
Match: A0A2E5KPI4_9PROT (Uncharacterized protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A2E5KPI4_9PROT) HSP 1 Score: 155 bits (392), Expect = 7.090e-45 Identity = 77/139 (55.40%), Postives = 95/139 (68.35%), Query Frame = 1
Query: 1 GEELSWGQHLFGWGTPAYLEAVNDQEETNLHNISSWFDQKPRLLLEIWVLVGGVILPLTRLARGQSYDRADERYWFWPTTELLPTAALAILVRLPERIKSLF-DIAQLPLELRFSEPQEYYFALFLLLYLLSIDRRLRG 414
GEELSWGQ LF W TP LE VNDQ ETN+HNISSWFDQKPRLLLE+WVL GGV+ + A G+ YWFWP +L+P + LA++V +P+RI F + P ++R +E QEY FA+FL LYL S+ RLR
Sbjct: 97 GEELSWGQSLFHWETPELLERVNDQGETNIHNISSWFDQKPRLLLELWVLFGGVLFHVWSKATGRRCPPGHWAYWFWPARQLIPVSVLALIVMMPKRILESFGSLPPPPFDIRETELQEYLFAVFLTLYLWSVLTRLRA 235
BLAST of mRNA_M-pyrifera_M_contig127497.5540.1 vs. uniprot
Match: A0A381V889_9ZZZZ (Uncharacterized protein n=1 Tax=marine metagenome TaxID=408172 RepID=A0A381V889_9ZZZZ) HSP 1 Score: 153 bits (386), Expect = 4.960e-44 Identity = 76/141 (53.90%), Postives = 96/141 (68.09%), Query Frame = 1
Query: 1 GEELSWGQHLFGWGTPAYLEAVNDQEETNLHNISSWFDQKPRLLLEIWVLVGGVILPLTRLARGQSY--DRADERYWFWPTTELLPTAALAILVRLPERIKSLFDI-AQLPLELRFSEPQEYYFALFLLLYLLSIDRRLRG 414
GEE SWGQH GW TP + +NDQ+ETNLHN SSW DQKPRLLLE+ +L+G ++ PL R +++ D AD YW WP +LLPTA LA+ V LP+R + LF PL++R SE QE+YFALF+ LYL S +RL
Sbjct: 92 GEEASWGQHWVGWETPQAMSNLNDQDETNLHNTSSWLDQKPRLLLELGILIGSLLYPLYLWLRQRAWPSDPADVHYWIWPDRQLLPTALLAMAVVLPQRFEKLFGWPVPYPLDIRTSETQEFYFALFISLYLYSFQKRLHA 232
BLAST of mRNA_M-pyrifera_M_contig127497.5540.1 vs. uniprot
Match: A0A3B9BJ96_9PROT (Uncharacterized protein n=4 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3B9BJ96_9PROT) HSP 1 Score: 149 bits (377), Expect = 2.630e-42 Identity = 75/140 (53.57%), Postives = 94/140 (67.14%), Query Frame = 1
Query: 1 GEELSWGQHLFGWGTPAYLEAVNDQEETNLHNISSWFDQKPRLLLEIWVLVGGVILPLT-RLARGQSYDRADERYWFWPTTELLPTAALAILVRLPERIKSLFD-IAQLPLELRFSEPQEYYFALFLLLYLLSIDRRLRG 414
GEE+SWGQH FGW TP ++A+NDQ ETNLHN++SW DQKPRLLL W ++GG+ILPL RL R D RYW P +P A + +LVRLPE I FD + P ++R SE QE Y ALFL +YL+S+ RR +
Sbjct: 119 GEEISWGQHFFGWATPEAVDALNDQGETNLHNMTSWLDQKPRLLLVFWAVIGGLILPLLHRLNYLAIGGRDDWRYWIIPPAACMPAAIIVMLVRLPEEIAYAFDRVVLFPFDVRSSEVQELYLALFLSVYLISVYRRAKA 258
BLAST of mRNA_M-pyrifera_M_contig127497.5540.1 vs. uniprot
Match: UPI00146AC13F (hypothetical protein n=1 Tax=Sneathiella aquimaris TaxID=2599305 RepID=UPI00146AC13F) HSP 1 Score: 147 bits (372), Expect = 5.150e-42 Identity = 68/140 (48.57%), Postives = 94/140 (67.14%), Query Frame = 1
Query: 1 GEELSWGQHLFGWGTPAYLEAVNDQEETNLHNISSWFDQKPRLLLEIWVLVGGVILPLTRLARGQSYDRADER--YWFWPTTELLPTAALAILVRLPERIKSLFDIA-QLPLELRFSEPQEYYFALFLLLYLLSIDRRLR 411
GEE SWGQH FGW E + + ETN+HN + WFDQKP++L+E W ++GG+I+PLT L +G+ D YW WPT LPTA + +L++ ER++ FD+A P ++RFSEPQEYYF LF LY+ S+ +R+R
Sbjct: 83 GEEASWGQHWFGWAADGIFED-HPRGETNIHNTNHWFDQKPKILVEAWTIIGGIIIPLTVLYKGRKRTIQDRTIWYWIWPTYICLPTAVIGLLIKNTERVRQAFDLALPAPFDIRFSEPQEYYFGLFFFLYMYSLFKRIR 221
BLAST of mRNA_M-pyrifera_M_contig127497.5540.1 vs. uniprot
Match: A0A2E9Y435_9PROT (Uncharacterized protein n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E9Y435_9PROT) HSP 1 Score: 147 bits (370), Expect = 1.250e-41 Identity = 78/139 (56.12%), Postives = 93/139 (66.91%), Query Frame = 1
Query: 1 GEELSWGQHLFGWGTPAYLEAVNDQEETNLHNISSWFDQKPRLLLEIWVLVGGVILP--LTRLARGQSYDRADERYWFWPTTELLPTAALAILVRLPERIKSLFDIA-QLPLELRFSEPQEYYFALFLLLYLLSIDRRL 408
GEE SWGQH GW TP L +NDQ ETNLHN SSW DQKPRLLLE+ VL GG++ P L R + D AD +W WP +LLPTA LAI + LP+R++ F PL++R SE QE+YFALFL LYL+S RL
Sbjct: 85 GEEASWGQHWLGWETPEALGKLNDQRETNLHNTSSWLDQKPRLLLELGVLAGGLLYPAFLFLGRRRRPMDPADFHHWLWPGQQLLPTALLAIAIGLPQRLEKWFGWPIPYPLDIRASETQEFYFALFLSLYLVSFYLRL 223 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig127497.5540.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig127497.5540.1 >prot_M-pyrifera_M_contig127497.5540.1 ID=prot_M-pyrifera_M_contig127497.5540.1|Name=mRNA_M-pyrifera_M_contig127497.5540.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=139bp GEELSWGQHLFGWGTPAYLEAVNDQEETNLHNISSWFDQKPRLLLEIWVLback to top mRNA from alignment at M-pyrifera_M_contig127497:87..503- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig127497.5540.1 ID=mRNA_M-pyrifera_M_contig127497.5540.1|Name=mRNA_M-pyrifera_M_contig127497.5540.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=417bp|location=Sequence derived from alignment at M-pyrifera_M_contig127497:87..503- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig127497:87..503- >mRNA_M-pyrifera_M_contig127497.5540.1 ID=mRNA_M-pyrifera_M_contig127497.5540.1|Name=mRNA_M-pyrifera_M_contig127497.5540.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=834bp|location=Sequence derived from alignment at M-pyrifera_M_contig127497:87..503- (Macrocystis pyrifera P11B4 male)back to top |