mRNA_M-pyrifera_M_contig127491.5539.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig127491.5539.1
Unique NamemRNA_M-pyrifera_M_contig127491.5539.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
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BLAST of mRNA_M-pyrifera_M_contig127491.5539.1 vs. uniprot
Match: A0A397CBR3_9STRA (Aa_trans domain-containing protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397CBR3_9STRA)

HSP 1 Score: 120 bits (301), Expect = 4.900e-30
Identity = 62/165 (37.58%), Postives = 96/165 (58.18%), Query Frame = 1 
Query:    1 PISLARSMSALRFTSVLGTACVVYLSLALTGYYLAECH---AQAHGCVWDGLPSSALWPRHPGDVFRAVPLALFAYTCHCHVLPVFVDLQRPSPRRMYKILRRAIAAAATIYCVAAASGYLLFLDRTEGNVMLNDFHHSPPIVAAGVGMAVTVMLAAPLIAHGFK 486
            P+SL RS+S+LRF+S+    C+V+L+L +   Y    H   A      W+ LP + L     G +  A+PL +FAYTCH +VLP+++ LQR S  RMYK+ RR+++ A  +Y + +A  +L F   T  N + ND+HH   I+A  +  AV +++  PL  H  +
Sbjct:  142 PLSLLRSLSSLRFSSLFSLLCIVFLTLTVVAKYFQFVHLGYAPDFVYQWNHLPLATL---DVGRILTALPLVIFAYTCHPNVLPIYIQLQRRSSPRMYKVARRSLSLATALYALLSAFVFLTFGMATHTNFLQNDYHHDAAIIAGSIFFAVAMVITTPLYIHTLR 303
[Close]
BLAST of mRNA_M-pyrifera_M_contig127491.5539.1 vs. uniprot
Match: W4GRY9_9STRA (Aa_trans domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GRY9_9STRA)

HSP 1 Score: 120 bits (301), Expect = 6.050e-30
Identity = 62/165 (37.58%), Postives = 96/165 (58.18%), Query Frame = 1 
Query:    1 PISLARSMSALRFTSVLGTACVVYLSLALTGYYLAECH---AQAHGCVWDGLPSSALWPRHPGDVFRAVPLALFAYTCHCHVLPVFVDLQRPSPRRMYKILRRAIAAAATIYCVAAASGYLLFLDRTEGNVMLNDFHHSPPIVAAGVGMAVTVMLAAPLIAHGFK 486
            P+SL RS+S+LRF+S+    C+V+L+L +   Y    H   A      W+ LP + L     G +  A+PL +FAYTCH +VLP+++ LQR S  RMYK+ RR+++ A  +Y + +A  +L F   T  N + ND+HH   I+A  +  AV +++  PL  H  +
Sbjct:   65 PLSLLRSLSSLRFSSLFSLLCIVFLTLTVVAKYFQFVHLGYAPDFVYQWNHLPLATL---DVGRILTALPLVIFAYTCHPNVLPIYIQLQRRSSPRMYKVARRSLSLATALYALLSAFVFLTFGMATHTNFLQNDYHHDAAIIAGSIFFAVAMVITTPLYIHTLR 226
[Close]
BLAST of mRNA_M-pyrifera_M_contig127491.5539.1 vs. uniprot
Match: A0A425DBY0_9STRA (Aa_trans domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A425DBY0_9STRA)

HSP 1 Score: 120 bits (301), Expect = 6.900e-30
Identity = 62/165 (37.58%), Postives = 96/165 (58.18%), Query Frame = 1 
Query:    1 PISLARSMSALRFTSVLGTACVVYLSLALTGYYLAECH---AQAHGCVWDGLPSSALWPRHPGDVFRAVPLALFAYTCHCHVLPVFVDLQRPSPRRMYKILRRAIAAAATIYCVAAASGYLLFLDRTEGNVMLNDFHHSPPIVAAGVGMAVTVMLAAPLIAHGFK 486
            P+SL RS+S+LRF+S+    C+V+L+L +   Y    H   A      W+ LP + L     G +  A+PL +FAYTCH +VLP+++ LQR S  RMYK+ RR+++ A  +Y + +A  +L F   T  N + ND+HH   I+A  +  AV +++  PL  H  +
Sbjct:   72 PLSLLRSLSSLRFSSLFSLLCIVFLTLTVVAKYFQFVHLGYAPDFVYQWNHLPLATL---DVGRILTALPLVIFAYTCHPNVLPIYIQLQRRSSPRMYKVARRSLSLATALYALLSAFVFLTFGMATHTNFLQNDYHHDAAIIAGSIFFAVAMVITTPLYIHTLR 233
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BLAST of mRNA_M-pyrifera_M_contig127491.5539.1 vs. uniprot
Match: A0A397E3M6_9STRA (Aa_trans domain-containing protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397E3M6_9STRA)

HSP 1 Score: 120 bits (301), Expect = 7.840e-30
Identity = 62/165 (37.58%), Postives = 96/165 (58.18%), Query Frame = 1 
Query:    1 PISLARSMSALRFTSVLGTACVVYLSLALTGYYLAECH---AQAHGCVWDGLPSSALWPRHPGDVFRAVPLALFAYTCHCHVLPVFVDLQRPSPRRMYKILRRAIAAAATIYCVAAASGYLLFLDRTEGNVMLNDFHHSPPIVAAGVGMAVTVMLAAPLIAHGFK 486
            P+SL RS+S+LRF+S+    C+V+L+L +   Y    H   A      W+ LP + L     G +  A+PL +FAYTCH +VLP+++ LQR S  RMYK+ RR+++ A  +Y + +A  +L F   T  N + ND+HH   I+A  +  AV +++  PL  H  +
Sbjct:  143 PLSLLRSLSSLRFSSLFSLLCIVFLTLTVVAKYFQFVHLGYAPDFVYQWNHLPLATL---DVGRILTALPLVIFAYTCHPNVLPIYIQLQRRSSPRMYKVARRSLSLATALYALLSAFVFLTFGMATHTNFLQNDYHHDAAIIAGSIFFAVAMVITTPLYIHTLR 304
[Close]
BLAST of mRNA_M-pyrifera_M_contig127491.5539.1 vs. uniprot
Match: A0A418D4V8_9STRA (Helicase C-terminal domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A418D4V8_9STRA)

HSP 1 Score: 122 bits (306), Expect = 2.360e-29
Identity = 63/165 (38.18%), Postives = 97/165 (58.79%), Query Frame = 1 
Query:    1 PISLARSMSALRFTSVLGTACVVYLSLALTGYYLAECH---AQAHGCVWDGLPSSALWPRHPGDVFRAVPLALFAYTCHCHVLPVFVDLQRPSPRRMYKILRRAIAAAATIYCVAAASGYLLFLDRTEGNVMLNDFHHSPPIVAAGVGMAVTVMLAAPLIAHGFK 486
            P+SL RS+S+LRF+S+    C+V+L+L +   Y    H   A      W+ LP + L     G +  A+PL +FAYTCH +VLP+++ LQR S  RMYK+ RR+++ A T+Y + +A  +L F   T  N + ND+HH   I+A  +  AV +++  PL  H  +
Sbjct:  143 PLSLLRSLSSLRFSSLFSLLCIVFLTLTVVAKYFQFVHLGYAPDFVYQWNHLPLATL---DVGRILTALPLVIFAYTCHPNVLPIYIQLQRRSSPRMYKVARRSLSLATTLYALLSAFVFLTFGMATHTNFLQNDYHHDAAIIAGSIFFAVAMVITTPLYIHTLR 304
[Close]
BLAST of mRNA_M-pyrifera_M_contig127491.5539.1 vs. uniprot
Match: W4GS99_9STRA (Aa_trans domain-containing protein n=6 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GS99_9STRA)

HSP 1 Score: 120 bits (301), Expect = 3.800e-29
Identity = 62/165 (37.58%), Postives = 96/165 (58.18%), Query Frame = 1 
Query:    1 PISLARSMSALRFTSVLGTACVVYLSLALTGYYLAECH---AQAHGCVWDGLPSSALWPRHPGDVFRAVPLALFAYTCHCHVLPVFVDLQRPSPRRMYKILRRAIAAAATIYCVAAASGYLLFLDRTEGNVMLNDFHHSPPIVAAGVGMAVTVMLAAPLIAHGFK 486
            P+SL RS+S+LRF+S+    C+V+L+L +   Y    H   A      W+ LP + L     G +  A+PL +FAYTCH +VLP+++ LQR S  RMYK+ RR+++ A  +Y + +A  +L F   T  N + ND+HH   I+A  +  AV +++  PL  H  +
Sbjct:  187 PLSLLRSLSSLRFSSLFSLLCIVFLTLTVVAKYFQFVHLGYAPDFVYQWNHLPLATL---DVGRILTALPLVIFAYTCHPNVLPIYIQLQRRSSPRMYKVARRSLSLATALYALLSAFVFLTFGMATHTNFLQNDYHHDAAIIAGSIFFAVAMVITTPLYIHTLR 348
[Close]
BLAST of mRNA_M-pyrifera_M_contig127491.5539.1 vs. uniprot
Match: A0A2R5GZA0_9STRA (Sodium-coupled neutral amino acid transporter 5 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GZA0_9STRA)

HSP 1 Score: 117 bits (293), Expect = 9.100e-28
Identity = 63/183 (34.43%), Postives = 103/183 (56.28%), Query Frame = 1 
Query:    1 PISLARSMSALRFTSVLGTACVVYLSLALTGYYLAECHAQAH------------GCVWDG-LPSSALWPRHPG--DVFRAVPLALFAYTCHCHVLPVFVDLQRPSPRRMYKILRRAIAAAATIYCVAAASGYLLF---LDRTEGNVMLNDFHHSPPIVAAGVGMAVTVMLAAPLIAHGFKGEV 495
            P+ L R+M ALR++S++G AC  YL++ +   Y   C   AH             C W+  + S  +   + G   +   +P+ +++YTCH +VLP+F++L +P+ RRM K++ RA+  A  +Y +  +  YL F   L  +EGN + NDFH +   +   VGM+++V+LA PL  H F+G V
Sbjct:  225 PLCLLRTMGALRYSSLIGVACSCYLAIVVMVTYFDFCGHHAHVVSPRSEDYQVVECFWEKPVESDPIVLANFGIDRLLATLPIVVYSYTCHPNVLPIFLELNKPTRRRMTKVVSRALGLALVLYSIIGSFAYLTFKTQLAESEGNFLSNDFHRNESALLGAVGMSLSVILAIPLFVHAFRGNV 407
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BLAST of mRNA_M-pyrifera_M_contig127491.5539.1 vs. uniprot
Match: T0Q3N5_SAPDV (Aa_trans domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=T0Q3N5_SAPDV)

HSP 1 Score: 112 bits (280), Expect = 3.680e-26
Identity = 54/162 (33.33%), Postives = 88/162 (54.32%), Query Frame = 1 
Query:    1 PISLARSMSALRFTSVLGTACVVYLSLALTGYYLAECHAQAHGCVWDGLPSSALWPRHPGDVFRAVPLALFAYTCHCHVLPVFVDLQRPSPRRMYKILRRAIAAAATIYCVAAASGYLLFLDRTEGNVMLNDFHHSPPIVAAGVGMAVTVMLAAPLIAHGFK 486
            P+SL RS+S+LRF+S+    C+V+L++ +   Y    H       W       ++   P  +  AVPL +FAYTCH +VLP+++ L+R S  RMYK+ RR++  A+ +Y   +      F D T  N + ND+H    I A  + + V++++  PL  H  +
Sbjct:  180 PLSLFRSLSSLRFSSLFSILCIVFLTITVVAKYFQFAHLGFAPDFWYQCKHLTMFNFKPSRILTAVPLVVFAYTCHPNVLPIYLQLKRRSSPRMYKVARRSLGVASLVYLALSVFAVFTFGDATRSNFLENDYHGDAAITAGCIFLGVSIVVTTPLYIHTLR 341
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BLAST of mRNA_M-pyrifera_M_contig127491.5539.1 vs. uniprot
Match: A0A485LQJ8_9STRA (Aste57867_24513 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LQJ8_9STRA)

HSP 1 Score: 111 bits (278), Expect = 7.660e-26
Identity = 61/165 (36.97%), Postives = 92/165 (55.76%), Query Frame = 1 
Query:    1 PISLARSMSALRFTSVLGTACVVYLSLALTGYYLAECH---AQAHGCVWDGLPSSALWPRHPGDVFRAVPLALFAYTCHCHVLPVFVDLQRPSPRRMYKILRRAIAAAATIYCVAAASGYLLFLDRTEGNVMLNDFHHSPPIVAAGVGMAVTVMLAAPLIAHGFK 486
            P+SL RS+S+LRF+S+    C+ +L+  +   Y    H   A +    W  LP   L  R    + +A+PL +FA+TCH +VLP+++ LQR S  RMYK+ RR++  A T+Y V   S +L F   T  N + N++H    IVA  +  AV ++L  PL  H  +
Sbjct:  186 PLSLFRSLSSLRFSSLFSLLCIFFLTSTVVVKYFQFVHLGYAPSFAYQWAHLPLFTLDMRR---ILKALPLVIFAFTCHPNVLPIYLQLQRRSSVRMYKVARRSLGLATTLYVVLGTSVFLTFGMDTRSNFLQNNYHQDAAIVAGAIFFAVALVLTTPLYIHTLR 347
[Close]
BLAST of mRNA_M-pyrifera_M_contig127491.5539.1 vs. uniprot
Match: A0A024TRS5_9STRA (Aa_trans domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TRS5_9STRA)

HSP 1 Score: 109 bits (272), Expect = 4.890e-25
Identity = 60/165 (36.36%), Postives = 95/165 (57.58%), Query Frame = 1 
Query:    1 PISLARSMSALRFTSVLGTACVVYLSLALTGYYLAEC---HAQAHGCVWDGLPSSALWPRHPGDVFRAVPLALFAYTCHCHVLPVFVDLQRPSPRRMYKILRRAIAAAATIYCVAAASGYLLFLDRTEGNVMLNDFHHSPPIVAAGVGMAVTVMLAAPLIAHGFK 486
            P+SL RS+S+LRF+S+    C+V+L++ +   Y       +A+     W+ LP   L  R    +  A+PL +FAYTCH +VLP+++ LQR S  RMYK+ RR+ + A T+Y + +A  +L F   T  N + ND+H    +VA  +  AV +++  PL  H  +
Sbjct:  185 PLSLLRSLSSLRFSSLFSLLCIVFLTVTVVVKYFQFVQLGYAKDVVYQWNHLPLFTLDVRR---ILVALPLVIFAYTCHPNVLPIYLQLQRRSSPRMYKVARRSFSVATTLYVLLSAFVFLTFGMATRTNFLENDYHTDAAVVAGSIFFAVALVITTPLYIHTLR 346
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig127491.5539.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A397CBR3_9STRA4.900e-3037.58Aa_trans domain-containing protein n=3 Tax=Aphanom... [more]
W4GRY9_9STRA6.050e-3037.58Aa_trans domain-containing protein n=1 Tax=Aphanom... [more]
A0A425DBY0_9STRA6.900e-3037.58Aa_trans domain-containing protein n=1 Tax=Aphanom... [more]
A0A397E3M6_9STRA7.840e-3037.58Aa_trans domain-containing protein (Fragment) n=1 ... [more]
A0A418D4V8_9STRA2.360e-2938.18Helicase C-terminal domain-containing protein n=1 ... [more]
W4GS99_9STRA3.800e-2937.58Aa_trans domain-containing protein n=6 Tax=Aphanom... [more]
A0A2R5GZA0_9STRA9.100e-2834.43Sodium-coupled neutral amino acid transporter 5 n=... [more]
T0Q3N5_SAPDV3.680e-2633.33Aa_trans domain-containing protein n=2 Tax=Saprole... [more]
A0A485LQJ8_9STRA7.660e-2636.97Aste57867_24513 protein n=1 Tax=Aphanomyces stella... [more]
A0A024TRS5_9STRA4.890e-2536.36Aa_trans domain-containing protein n=1 Tax=Aphanom... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig127491contigM-pyrifera_M_contig127491:1..495 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score105.1
Seed ortholog evalue3e-20
Seed eggNOG ortholog164328.Phyra79893
Preferred nameSLC38A1
KEGG koko:K02519,ko:K13576,ko:K14207,ko:K14990,ko:K14991,ko:K14992,ko:K14993
KEGG TC2.A.18.6,2.A.18.6.1,2.A.18.6.2,2.A.18.6.3,2.A.18.6.4,2.A.18.6.5,2.A.18.6.7,2.A.18.6.8
KEGG Pathwayko04724,ko04727,ko04964,ko04974,map04724,map04727,map04964,map04974
Hectar predicted targeting categorysignal peptide
GOsGO:0000003,GO:0001504,GO:0001505,GO:0003333,GO:0003674,GO:0005215,GO:0005283,GO:0005290,GO:0005326,GO:0005342,GO:0005343,GO:0005416,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0005903,GO:0006355,GO:0006357,GO:0006810,GO:0006811,GO:0006812,GO:0006814,GO:0006820,GO:0006835,GO:0006836,GO:0006855,GO:0006865,GO:0006867,GO:0006868,GO:0006950,GO:0007154,GO:0007275,GO:0007399,GO:0007417,GO:0007420,GO:0007565,GO:0008028,GO:0008150,GO:0008324,GO:0008509,GO:0008514,GO:0009267,GO:0009268,GO:0009605,GO:0009612,GO:0009628,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0009991,GO:0010447,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0014047,GO:0015075,GO:0015077,GO:0015081,GO:0015171,GO:0015174,GO:0015175,GO:0015179,GO:0015180,GO:0015182,GO:0015186,GO:0015187,GO:0015238,GO:0015291,GO:0015293,GO:0015294,GO:0015318,GO:0015370,GO:0015672,GO:0015695,GO:0015696,GO:0015697,GO:0015711,GO:0015718,GO:0015800,GO:0015802,GO:0015804,GO:0015807,GO:0015808,GO:0015816,GO:0015817,GO:0015838,GO:0015849,GO:0015893,GO:0016020,GO:0016021,GO:0016323,GO:0019219,GO:0019222,GO:0021537,GO:0021543,GO:0021987,GO:0022414,GO:0022804,GO:0022857,GO:0022858,GO:0022890,GO:0030001,GO:0030424,GO:0030425,GO:0030900,GO:0031224,GO:0031226,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031460,GO:0031667,GO:0031668,GO:0031669,GO:0032328,GO:0032501,GO:0032502,GO:0032879,GO:0032890,GO:0032892,GO:0032940,GO:0033554,GO:0034198,GO:0034220,GO:0035725,GO:0036477,GO:0042221,GO:0042383,GO:0042493,GO:0042594,GO:0042886,GO:0042887,GO:0042995,GO:0043005,GO:0043025,GO:0043269,GO:0043270,GO:0044070,GO:0044297,GO:0044425,GO:0044459,GO:0044463,GO:0044464,GO:0044703,GO:0044706,GO:0045117,GO:0045893,GO:0045935,GO:0045944,GO:0046717,GO:0046873,GO:0046903,GO:0046942,GO:0046943,GO:0048513,GO:0048518,GO:0048522,GO:0048731,GO:0048856,GO:0050789,GO:0050794,GO:0050896,GO:0051049,GO:0051050,GO:0051171,GO:0051173,GO:0051179,GO:0051234,GO:0051252,GO:0051254,GO:0051365,GO:0051704,GO:0051716,GO:0051952,GO:0051954,GO:0051955,GO:0051957,GO:0055085,GO:0060255,GO:0060322,GO:0061402,GO:0065007,GO:0065008,GO:0071214,GO:0071260,GO:0071467,GO:0071468,GO:0071496,GO:0071702,GO:0071705,GO:0071944,GO:0072337,GO:0080090,GO:0089709,GO:0097447,GO:0097458,GO:0098590,GO:0098655,GO:0098656,GO:0098657,GO:0098660,GO:0098662,GO:0098862,GO:0104004,GO:0120025,GO:0120038,GO:1901474,GO:1902475,GO:1902680,GO:1903506,GO:1903508,GO:1903793,GO:1903825,GO:1905039,GO:1990822,GO:1990928,GO:2000112,GO:2000485,GO:2000487,GO:2001141
EggNOG free text desc.Translation-initiation factor 2
EggNOG OGs3QA8T@4776,COG0532@1,COG0814@1,KOG1145@2759,KOG1305@2759
COG Functional cat.J
Best tax levelPeronosporales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko02000,ko03012,ko03029
Exons1
Model size495
Cds size474
Stop0
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815789.3283179-UTR-M-pyrifera_M_contig127491:0..211622815789.3283179-UTR-M-pyrifera_M_contig127491:0..21Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig127491 1..21 +
1692277570.4020045-UTR-M-pyrifera_M_contig127491:0..211692277570.4020045-UTR-M-pyrifera_M_contig127491:0..21Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig127491 1..21 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815789.3419118-CDS-M-pyrifera_M_contig127491:21..4951622815789.3419118-CDS-M-pyrifera_M_contig127491:21..495Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig127491 22..495 +
1692277570.4140437-CDS-M-pyrifera_M_contig127491:21..4951692277570.4140437-CDS-M-pyrifera_M_contig127491:21..495Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig127491 22..495 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig127491.5539.1prot_M-pyrifera_M_contig127491.5539.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig127491 22..495 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig127491.5539.1

>prot_M-pyrifera_M_contig127491.5539.1 ID=prot_M-pyrifera_M_contig127491.5539.1|Name=mRNA_M-pyrifera_M_contig127491.5539.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=158bp
MSALRFTSVLGTACVVYLSLALTGYYLAECHAQAHGCVWDGLPSSALWPR
HPGDVFRAVPLALFAYTCHCHVLPVFVDLQRPSPRRMYKILRRAIAAAAT
IYCVAAASGYLLFLDRTEGNVMLNDFHHSPPIVAAGVGMAVTVMLAAPLI
AHGFKGEV
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mRNA from alignment at M-pyrifera_M_contig127491:1..495+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig127491.5539.1 ID=mRNA_M-pyrifera_M_contig127491.5539.1|Name=mRNA_M-pyrifera_M_contig127491.5539.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=495bp|location=Sequence derived from alignment at M-pyrifera_M_contig127491:1..495+ (Macrocystis pyrifera P11B4 male)
CCCATCTCCCTGGCTCGATCCATGTCCGCTCTCCGCTTCACCTCCGTGCT
CGGCACCGCCTGCGTCGTCTACCTCAGCCTCGCCCTCACCGGCTACTACC
TGGCCGAGTGCCACGCGCAGGCGCACGGCTGCGTGTGGGACGGCCTGCCC
AGCTCCGCACTGTGGCCGCGACACCCGGGAGACGTGTTCCGGGCCGTCCC
GCTCGCCCTCTTCGCCTACACCTGCCACTGCCACGTGCTGCCCGTGTTCG
TCGACCTGCAGCGCCCGTCGCCGCGCCGCATGTACAAGATCCTGCGCCGC
GCGATCGCGGCGGCGGCCACCATCTACTGCGTGGCGGCCGCCTCTGGCTA
CTTGCTGTTCCTGGACCGGACCGAGGGGAACGTGATGCTGAACGACTTCC
ACCACTCGCCGCCCATCGTGGCGGCCGGCGTGGGCATGGCGGTCACGGTG
ATGCTGGCCGCGCCGCTCATCGCGCACGGCTTCAAGGGCGAGGTC
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig127491:1..495+

>mRNA_M-pyrifera_M_contig127491.5539.1 ID=mRNA_M-pyrifera_M_contig127491.5539.1|Name=mRNA_M-pyrifera_M_contig127491.5539.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=948bp|location=Sequence derived from alignment at M-pyrifera_M_contig127491:1..495+ (Macrocystis pyrifera P11B4 male)
ATGTCCGCTCTCCGCTTCACCTCCGTGCTCGGCACCGCCTGCGTCGTCTA
CCTCAGCCTCGCCCTCACCGGCTACTACCTGGCCGAGTGCCACGCGCAGG
CGCACGGCTGCGTGTGGGACGGCCTGCCCAGCTCCGCACTGTGGCCGCGA
CACCCGGGAGACGTGTTCCGGGCCGTCCCGCTCGCCCTCTTCGCCTACAC
CTGCCACTGCCACGTGCTGCCCGTGTTCGTCGACCTGCAGCGCCCGTCGC
CGCGCCGCATGTACAAGATCCTGCGCCGCGCGATCGCGGCGGCGGCCACC
ATCTACTGCGTGGCGGCCGCCTCTGGCTACTTGCTGTTCCTGGACCGGAC
CGAGGGGAACGTGATGCTGAACGACTTCCACCACTCGCCGCCCATCGTGG
CGGCCGGCGTGGGCATGGCGGTCACGGTGATGCTGGCCGCGCCGCTCATC
GCGCACGGCTTCAAGGGCGAGGTCATGTCCGCTCTCCGCTTCACCTCCGT
GCTCGGCACCGCCTGCGTCGTCTACCTCAGCCTCGCCCTCACCGGCTACT
ACCTGGCCGAGTGCCACGCGCAGGCGCACGGCTGCGTGTGGGACGGCCTG
CCCAGCTCCGCACTGTGGCCGCGACACCCGGGAGACGTGTTCCGGGCCGT
CCCGCTCGCCCTCTTCGCCTACACCTGCCACTGCCACGTGCTGCCCGTGT
TCGTCGACCTGCAGCGCCCGTCGCCGCGCCGCATGTACAAGATCCTGCGC
CGCGCGATCGCGGCGGCGGCCACCATCTACTGCGTGGCGGCCGCCTCTGG
CTACTTGCTGTTCCTGGACCGGACCGAGGGGAACGTGATGCTGAACGACT
TCCACCACTCGCCGCCCATCGTGGCGGCCGGCGTGGGCATGGCGGTCACG
GTGATGCTGGCCGCGCCGCTCATCGCGCACGGCTTCAAGGGCGAGGTC
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